RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE2N (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074781

Ensembl transcript IDs: ENSMUST00000099329.5

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAACCAACTGTCCACATGACACCACTGAGGTCTACTTGGCTGACTaGGAGCACTCTTACAGAACACCAGATGGTCTTCCCCACCCTCCG +
Preference number: 1 (lower is better)
Translates to: PTNCPHDTTEVYLAD*EHSYRTPDGLPHPP
Trigger: CGGAGGGTGGGGAAGACCATCTGGTGTTCTGTAAGAGTGCTCCCAGTCAGCCAAGTAGACCTCAGTGGTGTCATGTGGACAGTTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CCA 90 bp AAACAAAGCCAACCAACTGTCCACATGACACCACTGAGGTCTACTTaGCTGACTGGGAGCACTCTTACAGAACACCAGATGGTCTTCCCC +
Preference number: 1 (lower is better)
Translates to: KQSQPTVHMTPLRST*LTGSTLTEHQMVFP
Trigger: GGGGAAGACCATCTGGTGTTCTGTAAGAGTGCTCCCAGTCAGCCAAGTAGACCTCAGTGGTGTCATGTGGACAGTTGGTTGGCTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 90 bp ACCAAGAGAAGTCATAACCTACACCTGAAGCTCAAATGCCATATGTaGCATGCAACTGCCCTCTTCACTGTGACTGCTGAGTATGGTCAA +
Preference number: 1 (lower is better)
Translates to: TKRSHNLHLKLKCHM*HATALFTVTAEYGQ
Trigger: TTGACCATACTCAGCAGTCACAGTGAAGAGGGCAGTTGCATGTCACATATGGCATTTGAGCTTCAGGTGTAGGTTATGACTTCTCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 90 bp ACTTCAAACCACAAAGCCCACATTTATACTCTAGGGCTTCAGAACTaGCTTCAAGATGCCAATTTGGAAGAAGTTGGTTTTCTTCTCTCT +
Preference number: 1 (lower is better)
Translates to: TSNHKAHIYTLGLQN*LQDANLEEVGFLLS
Trigger: AGAGAGAAGAAAACCAACTTCTTCCAAATTGGCATCTTGAAGTCAGTTCTGAAGCCCTAGAGTATAAATGTGGGCTTTGTGGTTTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR TCA 90 bp CAGATGGTCTTCCCCACCCTCCGGAGAAATGCTGAGCACAGCACCCCTGTGGTTGCCAGATCTCTGGGTTaGAGGCCAGCCTGGTCTGTA +
Preference number: 2 (lower is better)
Translates to: QMVFPTLRRNAEHSTPVVARSLG*RPAWSV
Trigger: TACAGACCAGGCTGGCCTTCAACCCAGAGATCTGGC...AACCACAGGGGTGCTGTGCTCAGCATTTCTCCGGAGGGTGGGGAAGACCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CAA 90 bp GAAACAAAGCCAACCAACTGTCCACATGACACCACTGAGGTCTACTaGGCTGACTGGGAGCACTCTTACAGAACACCAGATGGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: ETKPTNCPHDTTEVY*ADWEHSYRTPDGLP
Trigger: GGGAAGACCATCTGGTGTTCTGTAAGAGTGCTCCCAGTCAGCCAAGTAGACCTCAGTGGTGTCATGTGGACAGTTGGTTGGCTTTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR GCA 90 bp CAGATGGTCTTCCCCACCCTCCGGAGAAATGCTGAGCACAGCACCCCTGTGGTTGTAAAATTCTCCTCTTaGCAATTTGTCAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: QMVFPTLRRNAEHSTPVVVKFSS*QFVRWR
Trigger: TCTCCATCTGACAAATTGGCAAGAGGAGAATTTTAC...AACCACAGGGGTGCTGTGCTCAGCATTTCTCCGGAGGGTGGGGAAGACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR GCA 90 bp GAGTTCAACCTCCACCTCAACCTGTTGTTTCTTTTCAGCCCAGGCATAAGTAACGGGCTACATAGCAAATaGACAGGAACTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: EFNLHLNLLFLFSPGISNGLHSK*TGTEEP
Trigger: TGGCTCTTCAGTTCCTGTGCATTTGCTATGTAGCCC...GTTACTTATGCCTGGGCTGAAAAGAAACAACAGGTTGAGGTGGAGGTTGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR TCA 90 bp TCACATCTACATCCTCAAACCAGCAAGCAGCAGGCAAATGTTAATATGCTTTTGCTGCCCTCTTCACTGTaGCTGCTGAGTATGGTCAAC +
Preference number: 2 (lower is better)
Translates to: SHLHPQTSKQQANVNMLLLPSSL*LLSMVN
Trigger: GTTGACCATACTCAGCAGTCACAGTGAAGAGGGCAG...CAAAAGCATATTAACATTTGCCTGCTGCTTGCTGGTTTGAGGATGTAGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR CCA 90 bp GAGTTCAACCTCCACCTCAACCTGTTGTTTCTTTTCAGCCCAGGCATAAGTAACGATAAAAGGAATAGCTaGGCACAGTGGCCTTTGATC +
Preference number: 2 (lower is better)
Translates to: EFNLHLNLLFLFSPGISNDKRNS*AQWPLI
Trigger: GATCAAAGGCCACTGTGCCCAGCTATTCCTTTTATC...GTTACTTATGCCTGGGCTGAAAAGAAACAACAGGTTGAGGTGGAGGTTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR TCA 90 bp ATTCACATCTACATCCTCAAACCAGCAAGCAGCAGGCAAATGTTAATATGCTTTGTAAACTGGGAAAACTaGAACCTCTGCCCACCAGGC +
Preference number: 2 (lower is better)
Translates to: IHIYILKPASSRQMLICFVNWEN*NLCPPG
Trigger: GCCTGGTGGGCAGAGGTTTCAGTTTTCCCAGTTTAC...AAAGCATATTAACATTTGCCTGCTGCTTGCTGGTTTGAGGATGTAGATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR CCA 90 bp AAAGAGAATGGCATGTCATCCAGTGGTAACTGCTACTCAGCTCCTGCCAGGAGATGCCAATTTGTCAGATaGAGAGGACTAAAACAGAAT +
Preference number: 2 (lower is better)
Translates to: KENGMSSSGNCYSAPARRCQFVR*RGLKQN
Trigger: ATTCTGTTTTAGTCCTCTCCATCTGACAAATTGGCA...TCTCCTGGCAGGAGCTGAGTAGCAGTTACCACTGGATGACATGCCATTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR GCA 90 bp GGCCCAAACTATTCATTCACATCTACATCCTCAAACCAGCAAGCAGCAGGCAAAGATATTGATGCTTCATaGATGCTCAGAGCCAGTTTA +
Preference number: 2 (lower is better)
Translates to: GPNYSFTSTSSNQQAAGKDIDAS*MLRASL
Trigger: TAAACTGGCTCTGAGCATGCATGAAGCATCAATATC...TTTGCCTGCTGCTTGCTGGTTTGAGGATGTAGATGTGAATGAATAGTTTGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR GCA 90 bp CTGTTGTTTCTTTTCAGCCCAGGCATAAGTAACAATTCTTGCTTCTTCCAACTGTATGTGACATGCAACTaGCCTCTTCACTGTGACTGC +
Preference number: 2 (lower is better)
Translates to: LLFLFSPGISNNSCFFQLYVTCN*PLHCDC
Trigger: GCAGTCACAGTGAAGAGGGCAGTTGCATGTCACATA...CAGTTGGAAGAAGCAAGAATTGTTACTTATGCCTGGGCTGAAAAGAAACAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR CCA 90 bp TTTCTTTTCAGCCCAGGCATAAGTAACAATTCTTGCTTCTTCCAACTGGCTAAGAATAGCTGGGCACAGTaGCCTTTGATCCTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: FLFSPGISNNSCFFQLAKNSWAQ*PLILEE
Trigger: CTCTTCTAGGATCAAAGGCCACTGTGCCCAGCTATT...CTTAGCCAGTTGGAAGAAGCAAGAATTGTTACTTATGCCTGGGCTGAAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR TCA 90 bp TCAAAACTTTGTAAGAAAACAGAACCACACATACAGAAACAGGTAGGCTGGGAACTCAAATGCCATATGTaGCATGCAACTGCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SKLCKKTEPHIQKQVGWELKCHM*HATALF
Trigger: GAAGAGGGCAGTTGCATGTCACATATGGCATTTGAG...TTCCCAGCCTACCTGTTTCTGTATGTGTGGTTCTGTTTTCTTACAAAGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR CCA 90 bp TCAAAACTTTGTAAGAAAACAGAACCACACATACAGAAACAGGTAGGCTGGGAAGTCAACTTTCAAACATaGCAAGGACACCAAGGATCA +
Preference number: 2 (lower is better)
Translates to: SKLCKKTEPHIQKQVGWEVNFQT*QGHQGS
Trigger: TGATCCTTGGTGTCCTTGCCATGTTTGAAAGTTGAC...TTCCCAGCCTACCTGTTTCTGTATGTGTGGTTCTGTTTTCTTACAAAGTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR GCA 90 bp TCAAAACTTTGTAAGAAAACAGAACCACACATACAGAAACAGGTAGGCTGGGAATTGATGCTTCATGCATaGTCAGAGCCAGTTTATAAA +
Preference number: 2 (lower is better)
Translates to: SKLCKKTEPHIQKQVGWELMLHA*SEPVYK
Trigger: TTTATAAACTGGCTCTGAGCATGCATGAAGCATCAA...TTCCCAGCCTACCTGTTTCTGTATGTGTGGTTCTGTTTTCTTACAAAGTTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR CCA 90 bp GTTATTACATTAGTCAAGAGAACAATACCTAAACCACCAGGGAAACAAAGCCAATTCAAGATGCCAATTTaGAAGAAGTTGGTTTTCTTC +
Preference number: 2 (lower is better)
Translates to: VITLVKRTIPKPPGKQSQFKMPI*KKLVFF
Trigger: GAAGAAAACCAACTTCTTCCAAATTGGCATCTTGAA...TTGGCTTTGTTTCCCTGGTGGTTTAGGTATTGTTCTCTTGACTAATGTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CCA 72 bp CTGGGAAAACTGAAACCTCTGCCCACCAGGCCACTGTaGGTAATGTGTAAGGCATCAGCTATGACTAGGAGC +
Preference number: 3 (lower is better)
Translates to: LGKLKPLPTRPL*VMCKASAMTRS
Trigger: GCTCCTAGTCATAGCTGATGCCTTACACATTACCCACAGTGGCCTGGTGGGCAGAGGTTTCAGTTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CCA 72 bp TGTCCACATGACACCACTGAGGTCTACTTGGCTGACTaGGAGCACTCTTACAGAACACCAGATGGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: CPHDTTEVYLAD*EHSYRTPDGLP
Trigger: GGGAAGACCATCTGGTGTTCTGTAAGAGTGCTCCCAGTCAGCCAAGTAGACCTCAGTGGTGTCATGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR CAA 90 bp CAGATGGTCTTCCCCACCCTCCGGAGAAATGCTGAGCACAGCACCCCTGTGGTTGTGAATGTCTTTCTTTaGCTGGGGCTACAAAGTCAA +
Preference number: 3 (lower is better)
Translates to: QMVFPTLRRNAEHSTPVVVNVFL*LGLQSQ
Trigger: TTGACTTTGTAGCCCCAGCAAAAGAAAGACATTCAC...AACCACAGGGGTGCTGTGCTCAGCATTTCTCCGGAGGGTGGGGAAGACCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp ACACCAGATGGTCTTCCCCACCCTCCGGAGAAATGCTaGGCACAGCACCCCTGTGGTTTGAATATATCGATT +
Preference number: 3 (lower is better)
Translates to: TPDGLPHPPEKC*AQHPCGLNISI
Trigger: AATCGATATATTCAAACCACAGGGGTGCTGTGCTCAGCATTTCTCCGGAGGGTGGGGAAGACCATCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CCA 72 bp CAACCAACTGTCCACATGACACCACTGAGGTCTACTTaGCTGACTGGGAGCACTCTTACAGAACACCAGATG +
Preference number: 3 (lower is better)
Translates to: QPTVHMTPLRST*LTGSTLTEHQM
Trigger: CATCTGGTGTTCTGTAAGAGTGCTCCCAGTCAGCCAAGTAGACCTCAGTGGTGTCATGTGGACAGTTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp AGTCATAACCTACACCTGAAGCTCAAATGCCATATGTaGCATGCAACTGCCCTCTTCACTGTGACTGCTGAG +
Preference number: 3 (lower is better)
Translates to: SHNLHLKLKCHM*HATALFTVTAE
Trigger: CTCAGCAGTCACAGTGAAGAGGGCAGTTGCATGTCACATATGGCATTTGAGCTTCAGGTGTAGGTTATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR GCA 72 bp ACAGAAAAAGAGAATGGCATGTCATCCAGTGGTAACTaGTACTCAGCTCCTGCCAGGAGATGTCCACACAAT +
Preference number: 3 (lower is better)
Translates to: TEKENGMSSSGN*YSAPARRCPHN
Trigger: ATTGTGTGGACATCTCCTGGCAGGAGCTGAGTAGCAGTTACCACTGGATGACATGCCATTCTCTTTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR-3UTR CAA 90 bp GTTATTACATTAGTCAAGAGAACAATACCTAAACCACCAGGGAAACAAAGCCAAAGCCAGATCTCTGGGTaGAAGGCCAGCCTGGTCTGT +
Preference number: 3 (lower is better)
Translates to: VITLVKRTIPKPPGKQSQSQISG*KASLVC
Trigger: ACAGACCAGGCTGGCCTTCAACCCAGAGATCTGGCT...TTGGCTTTGTTTCCCTGGTGGTTTAGGTATTGTTCTCTTGACTAATGTAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CCA 72 bp AGCAAATTAAAGGATAAAAGGAATAGCTGGGCACAGTaGCCTTTGATCCTAGAAGAGGCAGCCAGATCTCTG +
Preference number: 3 (lower is better)
Translates to: SKLKDKRNSWAQ*PLILEEAARSL
Trigger: CAGAGATCTGGCTGCCTCTTCTAGGATCAAAGGCCACTGTGCCCAGCTATTCCTTTTATCCTTTAATTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp AATGCCATATGTGACATGCAACTGCCCTCTTCACTGTaGCTGCTGAGTATGGTCAACTTTCAAACATGGCAA +
Preference number: 3 (lower is better)
Translates to: NAICDMQLPSSL*LLSMVNFQTWQ
Trigger: TTGCCATGTTTGAAAGTTGACCATACTCAGCAGTCACAGTGAAGAGGGCAGTTGCATGTCACATATGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp TTCAGACAAGAACCAAGAGAAGTCATAACCTACACCTaGAGCTCAAATGCCATATGTGACATGCAACTGCCC +
Preference number: 3 (lower is better)
Translates to: FRQEPREVITYT*SSNAICDMQLP
Trigger: GGGCAGTTGCATGTCACATATGGCATTTGAGCTTCAGGTGTAGGTTATGACTTCTCTTGGTTCTTGTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp ACAGAACCACACATACAGAAACAGGTAGGCTGGGAATaGTTCCGACCTACTTTAAACAGAAAAAGAGAATGG +
Preference number: 3 (lower is better)
Translates to: TEPHIQKQVGWE*FRPTLNRKREW
Trigger: CCATTCTCTTTTTCTGTTTAAAGTAGGTCGGAATCATTCCCAGCCTACCTGTTTCTGTATGTGTGGTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp CTCCGGAGAAATGCTGAGCACAGCACCCCTGTGGTTTaGATATATCGATTTACACTGAACTTTATCTTACAA +
Preference number: 3 (lower is better)
Translates to: LRRNAEHSTPVV*IYRFTLNFILQ
Trigger: TTGTAAGATAAAGTTCAGTGTAAATCGATATATTCAAACCACAGGGGTGCTGTGCTCAGCATTTCTCCGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp CACAAAGCCCACATTTATACTCTAGGGCTTCAGAACTaGCTTCAAGATGCCAATTTGGAAGAAGTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: HKAHIYTLGLQN*LQDANLEEVGF
Trigger: AAAACCAACTTCTTCCAAATTGGCATCTTGAAGTCAGTTCTGAAGCCCTAGAGTATAAATGTGGGCTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR TCA 72 bp ACAGCACCCCTGTGGTTTGAATATATCGATTTACACTaGACTTTATCTTACAAGTACATTCCTGGTCTAGTG +
Preference number: 3 (lower is better)
Translates to: TAPLWFEYIDLH*TLSYKYIPGLV
Trigger: CACTAGACCAGGAATGTACTTGTAAGATAAAGTTCAGTGTAAATCGATATATTCAAACCACAGGGGTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CCA 72 bp GTACCCAATTTCTCATCTCACTTCGTAATTTGTATGTaGATAGCTCTCCTATGTAGTCCTAAAACTTCCGAT +
Preference number: 3 (lower is better)
Translates to: VPNFSSHFVICM*IALLCSPKTSD
Trigger: ATCGGAAGTTTTAGGACTACATAGGAGAGCTATCCACATACAAATTACGAAGTGAGATGAGAAATTGGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CAA 72 bp GCCTTTGATCCTAGAAGAGGCAGCCAGATCTCTGGGTaGAAGGCCAGCCTGGTCTGTAATAGTGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AFDPRRGSQISG*KASLVCNSEFQ
Trigger: CTGGAACTCACTATTACAGACCAGGCTGGCCTTCAACCCAGAGATCTGGCTGCCTCTTCTAGGATCAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CAA 72 bp CCAACCAACTGTCCACATGACACCACTGAGGTCTACTaGGCTGACTGGGAGCACTCTTACAGAACACCAGAT +
Preference number: 4 (lower is better)
Translates to: PTNCPHDTTEVY*ADWEHSYRTPD
Trigger: ATCTGGTGTTCTGTAAGAGTGCTCCCAGTCAGCCAAGTAGACCTCAGTGGTGTCATGTGGACAGTTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5
3UTR CAA 72 bp TCTGCATCAATGAAACAAACTGGTAAAATTCTCCTCTaGCCAATTTGTCAGATGGAGAGGACTAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: SASMKQTGKILL*PICQMERTKTE
Trigger: TTCTGTTTTAGTCCTCTCCATCTGACAAATTGGCAAGAGGAGAATTTTACCAGTTTGTTTCATTGATGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099329.5