Pregenerated sensors for UBE2M (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005575Ensembl transcript IDs: ENSMUST00000005714.14, ENSMUST00000125964.8, ENSMUST00000165394.9
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCACCCAATCCACGGCCACATTTATCTTCATTATAGACGCTGGTaGACCTCACTTGTACCTCCCACCCCACAGAAGGAAGAGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SHPIHGHIYLHYRRW*TSLVPPTPQKEEAE Trigger: CTCTGCCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAATGAAGATAAATGTGGCCGTGGATTGGGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR CCA 90 bp | TGGTCCCACCCAATCCACGGCCACATTTATCTTCATTATAGACGCTaGTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: WSHPIHGHIYLHYRR*WTSLVPPTPQKEEA Trigger: TGCCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAATGAAGATAAATGTGGCCGTGGATTGGGTGGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCCCTTTGCAGGGGATGCCTaGGCCGGTAACCCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RQGQGRGQGYPTHLTRAPFAGDA*AGNPGR Trigger: CCTGCCAGGGTTACCGGCCCAGGCATCCCCTGCAAA...GGGGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 ENSMUST00000165394.9 |
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| 3UTR-3UTR CCA 90 bp | CCACTTACCCCACAGTCAAGAGTGGGGAGTTGGACAGCACCCAGCGGGAGGGGGTTTGCAGGGGATGCCTaGGCCGGTAACCCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PLTPQSRVGSWTAPSGRGFAGDA*AGNPGR Trigger: CCTGCCAGGGTTACCGGCCCAGGCATCCCCTGCAAA...CCCCCTCCCGCTGGGTGCTGTCCAACTCCCCACTCTTGACTGTGGGGTAAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000005714.14 ENSMUST00000165394.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAAGAGGCAGAGGCCATGCATTTGCAGGGGATGCCTaGGCCGGTAACCCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VDLTCTSHPTEGRGRGHAFAGDA*AGNPGR Trigger: CCTGCCAGGGTTACCGGCCCAGGCATCCCCTGCAAA...TGCATGGCCTCTGCCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAAGAGGCAGAGGCCATGCACCCCACAGTCAAGAGTaGGGAGTTGGACAGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: VDLTCTSHPTEGRGRGHAPHSQE*GVGQHP Trigger: TGGGTGCTGTCCAACTCCCCACTCTTGACTGTGGGG...TGCATGGCCTCTGCCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCATTATAGACGCTGGTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAATCAAGAGTGGGGAGTTaGACAGCACCCAGCGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LHYRRWWTSLVPPTPQKESRVGS*TAPSGR Trigger: CCTCCCGCTGGGTGCTGTCCAACTCCCCACTCTTGA...TTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR CAA 90 bp | TCCACGGCCACATTTATCTTCATTATAGACGCTGGTGGACCTCACTaGTACCTCCCACCCCACAGAAGGAAGAGGCAGAGGCCATGCAGT | + |
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Preference number: 2 (lower is better) Translates to: STATFIFIIDAGGPH*YLPPHRRKRQRPCS Trigger: ACTGCATGGCCTCTGCCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAATGAAGATAAATGTGGCCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR-3UTR CAA 90 bp | GTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAAGAGGCAGAGGCCATGCATGGTGGTGGGGTGGGTaGCTTGGGCCTAGCGACCCA | + |
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Preference number: 3 (lower is better) Translates to: VDLTCTSHPTEGRGRGHAWWWGG*LGPSDP Trigger: TGGGTCGCTAGGCCCAAGCAACCCACCCCACCACCA...TGCATGGCCTCTGCCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR-3UTR CAA 90 bp | ATTATAGACGCTGGTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAAGAGGAGCGACCCAGGCCCATaGCCCACTTACCCCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: IIDAGGPHLYLPPHRRKRSDPGP*PTYPTV Trigger: GACTGTGGGGTAAGTGGGCAATGGGCCTGGGTCGCT...CCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| CDS-3UTR CCA 90 bp | AGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCCCAGCCTCCTTGTTCAGTaGGTCCTCAGGGTTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RQGQGRGQGYPTHLTRAPSLLVQ*VLRVRL Trigger: GAGCCGAACCCTGAGGACCCACTGAACAAGGAGGCT...GGGGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 ENSMUST00000165394.9 |
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| CDS-3UTR CCA 90 bp | AGAGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCAGCCTCCTTGTTCAGTaGGTCCTCAGGGTTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RGKAKAGAKATPHTLPGPSLLVQ*VLRVRL Trigger: GAGCCGAACCCTGAGGACCCACTGAACAAGGAGGCT...GGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 ENSMUST00000165394.9 |
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| CDS-3UTR CCA 90 bp | AGAGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCAGCGCTCGAAGTAGGTaGACCCGATGTAACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: RGKAKAGAKATPHTLPGPSARSR*TRCNHL Trigger: GAGGTGGTTACATCGGGTCCACCTACTTCGAGCGCT...GGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 ENSMUST00000165394.9 |
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| CDS-3UTR TCA 90 bp | CCCACTTACCCCACAGTCAAGAGTGGGGAGTTGGACAGCACCCAGCGGGAGGGGTCGTTAATGTCCTTCTaGATCCGGAGCTGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PTYPTVKSGELDSTQREGSLMSF*IRSCAA Trigger: GGCGGCGCAGCTCCGGATTCAGAAGGACATTAACGA...CCCCTCCCGCTGGGTGCTGTCCAACTCCCCACTCTTGACTGTGGGGTAAGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005714.14 |
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| CDS-3UTR CCA 90 bp | AGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCCCTGTAACCACCTCTCATaGAGCGCTGCACATTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RQGQGRGQGYPTHLTRAPCNHLS*SAAHFV Trigger: AACAAAATGTGCAGCGCTCCATGAGAGGTGGTTACA...GGGGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 ENSMUST00000165394.9 |
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| CDS-3UTR CCA 90 bp | AGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCCCCCTCGAGGTCAATGTTaGGATGATAAACCATTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RQGQGRGQGYPTHLTRAPPRGQC*DDKPLF Trigger: AAACAATGGTTTATCATCCCAACATTGACCTCGAGG...GGGGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 |
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| CDS-3UTR CCA 90 bp | CCCACTTACCCCACAGTCAAGAGTGGGGAGTTGGACAGCACCCAGCGGGAGGGGCCTCGAGGTCAATGTTaGGATGATAAACCATTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PTYPTVKSGELDSTQREGPRGQC*DDKPLF Trigger: AAACAATGGTTTATCATCCCAACATTGACCTCGAGG...CCCCTCCCGCTGGGTGCTGTCCAACTCCCCACTCTTGACTGTGGGGTAAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005714.14 |
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| CDS-3UTR CCA 90 bp | CTTCATTATAGACGCTGGTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAAAGCGCTCGAAGTAGGTaGACCCGATGTAACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: LHYRRWWTSLVPPTPQKESARSR*TRCNHL Trigger: GAGGTGGTTACATCGGGTCCACCTACTTCGAGCGCT...TTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| 3UTR CAA 72 bp | ACATTTATCTTCATTATAGACGCTGGTGGACCTCACTaGTACCTCCCACCCCACAGAAGGAAGAGGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TFIFIIDAGGPH*YLPPHRRKRQR Trigger: CCTCTGCCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAATGAAGATAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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| CDS-3UTR CAA 90 bp | AGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCCCGGAGCGCTGCACATTTaGTTCAAACAGCCGCCGGTT | + |
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Preference number: 5 (lower is better) Translates to: RQGQGRGQGYPTHLTRAPGALHI*FKQPPV Trigger: AACCGGCGGCTGTTTGAACAAAATGTGCAGCGCTCC...GGGGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 ENSMUST00000165394.9 |
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| CDS-3UTR CAA 90 bp | AGAGGCAAGGCCAAGGCAGGGGCCAAGGCTACCCCACACACCTTACCCGGGCCCGGAGCGCTGCACATTTaGTTCAAACAGCCGCCGGTT | + |
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Preference number: 5 (lower is better) Translates to: RGKAKAGAKATPHTLPGPGALHI*FKQPPV Trigger: AACCGGCGGCTGTTTGAACAAAATGTGCAGCGCTCC...GGGCCCGGGTAAGGTGTGTGGGGTAGCCTTGGCCCCTGCCTTGGCCTTGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005714.14 ENSMUST00000125964.8 ENSMUST00000165394.9 |
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| CDS-3UTR CAA 90 bp | ATTATAGACGCTGGTGGACCTCACTTGTACCTCCCACCCCACAGAAGGAAGAGGGGAGCGCTGCACATTTaGTTCAAACAGCCGCCGGTT | + |
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Preference number: 5 (lower is better) Translates to: IIDAGGPHLYLPPHRRKRGALHI*FKQPPV Trigger: AACCGGCGGCTGTTTGAACAAAATGTGCAGCGCTCC...CCTCTTCCTTCTGTGGGGTGGGAGGTACAAGTGAGGTCCACCAGCGTCTATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165394.9 |
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