Pregenerated sensors for UBE2L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038965Ensembl transcript IDs: ENSMUST00000090192.12, ENSMUST00000232035.2, ENSMUST00000232139.2, ENSMUST00000232514.2, ENSMUST00000232668.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTGGGCTGTCCCAGCAGCTGCTCTGAGAGAGGCAGAGCCATCGTaGCTGACCCCGCTGAGGGTAAGCCGTGAGGAGGGTGGCAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: SWAVPAAALREAEPS*LTPLRVSREEGGSG Trigger: ACCACTGCCACCCTCCTCACGGCTTACCCTCAGCGGGGTCAGCCACGATGGCTCTGCCTCTCTCAGAGCAGCTGCTGGGACAGCCCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR TCA 90 bp | GGACGAGACCCGGGCACTTCAAGGAACCAGGGGGATGTGGATTCCTaGGCCAGCTTGGGTCAGGCGTGGGTGGCTGCTCCACAGGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GRDPGTSRNQGDVDS*ASLGQAWVAAPQVS Trigger: GGAGACCTGTGGAGCAGCCACCCACGCCTGACCCAAGCTGGCTCAGGAATCCACATCCCCCTGGTTCCTTGAAGTGCCCGGGTCTCGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR GCA 90 bp | CAGAGGGAGGGAAAAGCCACCCTGTTCCTGGGCTGTCCCAGCAGCTaGTCTGAGAGAGGCAGAGCCATCGTGGCTGACCCCGCTGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: QREGKATLFLGCPSS*SERGRAIVADPAEG Trigger: ACCCTCAGCGGGGTCAGCCACGATGGCTCTGCCTCTCTCAGAGCAGCTGCTGGGACAGCCCAGGAACAGGGTGGCTTTTCCCTCCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR GCA 90 bp | GGGGGATGTGGATTCCTGAGCCAGCTTGGGTCAGGCGTGGGTGGCTaGTCCACAGGTCTCCCTGCCACCTTGCTCAAAGCCTGCTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: GGCGFLSQLGSGVGG*STGLPATLLKACSG Trigger: CCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAGCAGCCACCCACGCCTGACCCAAGCTGGCTCAGGAATCCACATCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR GCA 90 bp | CCTTGCTCAAAGCCTGCTCAGGGCAGGGCTGGACAGGACAAGGCATaGAAGCCCAGAGGGACACCACTGACTCCAAGGCAGGGCAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: PCSKPAQGRAGQDKA*KPRGTPLTPRQGRP Trigger: TGGCCTGCCCTGCCTTGGAGTCAGTGGTGTCCCTCTGGGCTTGCATGCCTTGTCCTGTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CCA 90 bp | GAAGAGCAGGACGAGACCCGGGCACTTCAAGGAACCAGGGGGATGTaGATTCCTGAGCCAGCTTGGGTCAGGCGTGGGTGGCTGCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: EEQDETRALQGTRGM*IPEPAWVRRGWLLH Trigger: GTGGAGCAGCCACCCACGCCTGACCCAAGCTGGCTCAGGAATCCACATCCCCCTGGTTCCTTGAAGTGCCCGGGTCTCGTCCTGCTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CCA 90 bp | TGCAAGCCCAGAGGGACACCACTGACTCCAAGGCAGGGCAGGCCATaGTTGTCAACAATGGGGCTGAGAGTCCCTGAGAGGGGCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CKPRGTPLTPRQGRP*LSTMGLRVPERGCW Trigger: CCAGCAGCCCCTCTCAGGGACTCTCAGCCCCATTGTTGACAACCATGGCCTGCCCTGCCTTGGAGTCAGTGGTGTCCCTCTGGGCTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CCA 90 bp | ACAGGTCTCCCTGCCACCTTGCTCAAAGCCTGCTCAGGGCAGGGCTaGACAGGACAAGGCATGCAAGCCCAGAGGGACACCACTGACTCC | + |
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Preference number: 1 (lower is better) Translates to: TGLPATLLKACSGQG*TGQGMQAQRDTTDS Trigger: GGAGTCAGTGGTGTCCCTCTGGGCTTGCATGCCTTGTCCTGTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR GCA 90 bp | CTCATTACCCACAGGCAGTGTTGGCACAGGAAACGTTGTCAGTGCTaGGGCCACCTCTGTGGGGAGCTGGGGCCTTGGTCTGTGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: LITHRQCWHRKRCQC*GHLCGELGPWSVEV Trigger: CACTTCCACAGACCAAGGCCCCAGCTCCCCACAGAGGTGGCCGCAGCACTGACAACGTTTCCTGTGCCAACACTGCCTGTGGGTAATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CCA 90 bp | GCAGTGTTGGCACAGGAAACGTTGTCAGTGCTGCGGCCACCTCTGTaGGGAGCTGGGGCCTTGGTCTGTGGAAGTGGGAATCGAAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: AVLAQETLSVLRPPL*GAGALVCGSGNRKV Trigger: CACTTTTCGATTCCCACTTCCACAGACCAAGGCCCCAGCTCCCCACAGAGGTGGCCGCAGCACTGACAACGTTTCCTGTGCCAACACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR GCA 90 bp | TGTATTCTCTGCTGGCAGACCCTCCCTCCAAGGTCACCACAAACCTaGTATAACAGGTTCCCTGCAGAGACCCAGCCAGCACAGTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: CILCWQTLPPRSPQT*YNRFPAETQPAQSD Trigger: GTCAGACTGTGCTGGCTGGGTCTCTGCAGGGAACCTGTTATAGCAGGTTTGTGGTGACCTTGGAGGGAGGGTCTGCCAGCAGAGAATACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR TCA 90 bp | GCCTGCCCTGTGCAGAAGCACTTCTCTCCAGGCAAGGTCCCTGACTaGAAGCTCGGACACACACAGCCACACCTACTTCTAACAAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: ACPVQKHFSPGKVPD*KLGHTQPHLLLTSY Trigger: GTAACTTGTTAGAAGTAGGTGTGGCTGTGTGTGTCCGAGCTTTCAGTCAGGGACCTTGCCTGGAGAGAAGTGCTTCTGCACAGGGCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 90 bp | ATGGAGCTACAATCCTCGCCTTTCTGCTGGGCTGACTCTAGGCGATaGCCACTATATGCATCTAGCACCACCCTCACTCTCCCTATCAGG | + |
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Preference number: 1 (lower is better) Translates to: MELQSSPFCWADSRR*PLYASSTTLTLPIR Trigger: CCTGATAGGGAGAGTGAGGGTGGTGCTAGATGCATATAGTGGTCATCGCCTAGAGTCAGCCCAGCAGAAAGGCGAGGATTGTAGCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 90 bp | AATCTTCTCCACAGGATTAGACCCCTAGTAGCAGAAGTGAGTTGGTaGACATGGGCAGTCAGGCCATCAGCTTCCTCAGGGTGTCACTAC | + |
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Preference number: 1 (lower is better) Translates to: NLLHRIRPLVAEVSW*TWAVRPSASSGCHY Trigger: GTAGTGACACCCTGAGGAAGCTGATGGCCTGACTGCCCATGTTCACCAACTCACTTCTGCTACTAGGGGTCTAATCCTGTGGAGAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR TCA 90 bp | GAATCACACGTGGCTATTAGCCCACTCAACGTGGAGCCTGGGAACTaGACTCAACAACTGCTGAGCTCTCTCTCCAGCTCCTATTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: ESHVAISPLNVEPGN*TQQLLSSLSSSYSK Trigger: CTTAGAATAGGAGCTGGAGAGAGAGCTCAGCAGTTGTTGAGTTCAGTTCCCAGGCTCCACGTTGAGTGGGCTAATAGCCACGTGTGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CCA 90 bp | TTCATGTTAGAATGCACAGAGGTCAGAAGAGGGTATCAGATCCCCTaGAGCTGGAATCACACGTGGCTATTAGCCCACTCAACGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: FMLECTEVRRGYQIP*SWNHTWLLAHSTWS Trigger: GCTCCACGTTGAGTGGGCTAATAGCCACGTGTGATTCCAGCTCCAGGGGATCTGATACCCTCTTCTGACCTCTGTGCATTCTAACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR GCA 90 bp | ATTAAGGACAGAATGGGGTCACAGCATCTTAGAAAGCCTATTCTCTaGCATTGTGGGAAGAGCAGGACGAGACCCGGGCACTTCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: IKDRMGSQHLRKPIL*HCGKSRTRPGHFKE Trigger: TTCCTTGAAGTGCCCGGGTCTCGTCCTGCTCTTCCCACAATGGCAGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCTGTCCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CCA 90 bp | CACAGAACCCACACTAAGTATGTAGAGAGGCAGGGGCTAGAGAGATaGCTCTCTAGAGGACCTGAGTTCCTTAGCACTCATGTGGCATTT | + |
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Preference number: 1 (lower is better) Translates to: HRTHTKYVERQGLER*LSRGPEFLSTHVAF Trigger: AAATGCCACATGAGTGCTAAGGAACTCAGGTCCTCTAGAGAGCCATCTCTCTAGCCCCTGCCTCTCTACATACTTAGTGTGGGTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 90 bp | CTGCTGCACAGCAGCCAGGAAACAAAACCAGACAAACACCAATGCTaGACACAAAAGCACCTATCGTATGGCCACAATAGTGCCACAGAA | + |
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Preference number: 1 (lower is better) Translates to: LLHSSQETKPDKHQC*TQKHLSYGHNSATE Trigger: TTCTGTGGCACTATTGTGGCCATACGATAGGTGCTTTTGTGTTCAGCATTGGTGTTTGTCTGGTTTTGTTTCCTGGCTGCTGTGCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CCA 90 bp | TTCATCCTAGAGCCCCTCCATTGCTATCAAGTCCAATCCTATTCATaGAGAATAAGCAGCACAAAGAGAGTCAAGTACCTAGCCAGCACC | + |
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Preference number: 1 (lower is better) Translates to: FILEPLHCYQVQSYS*RISSTKRVKYLAST Trigger: GGTGCTGGCTAGGTACTTGACTCTCTTTGTGCTGCTTATTCTCCATGAATAGGATTGGACTTGATAGCAATGGAGGGGCTCTAGGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 90 bp | CACAGCTTTAGGAAATGCAGAATTGCAAGGCATGAAAAGGGAAGGTaGTATAGGATGATGACTGCTGCACAGCAGCCAGGAAACAAAACC | + |
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Preference number: 1 (lower is better) Translates to: HSFRKCRIARHEKGR*YRMMTAAQQPGNKT Trigger: GGTTTTGTTTCCTGGCTGCTGTGCAGCAGTCATCATCCTATATCACCTTCCCTTTTCATGCCTTGCAATTCTGCATTTCCTAAAGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CCA 90 bp | AGGACATTAGATCTCCTGGAACTAGAGTCACAGAACTCTAATGTATaGGTTCTGAGGAACGAACCCAGGTTCTCAGGAACAACATCCAGT | + |
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Preference number: 1 (lower is better) Translates to: RTLDLLELESQNSNV*VLRNEPRFSGTTSS Trigger: ACTGGATGTTGTTCCTGAGAACCTGGGTTCGTTCCTCAGAACCCATACATTAGAGTTCTGTGACTCTAGTTCCAGGAGATCTAATGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 90 bp | TTCCTTAGCACTCATGTGGCATTTCACAAGAGATTTGATGCCATCTaGGCTCCCCAGCATTGCATGTACACGGTGCACAAATATACATTC | + |
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Preference number: 1 (lower is better) Translates to: FLSTHVAFHKRFDAI*APQHCMYTVHKYTF Trigger: GAATGTATATTTGTGCACCGTGTACATGCAATGCTGGGGAGCTCAGATGGCATCAAATCTCTTGTGAAATGCCACATGAGTGCTAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 90 bp | TTAGCCCACTCAACGTGGAGCCTGGGAACTGAACTCAACAACTGCTaGGCTCTCTCTCCAGCTCCTATTCTAAGACATTTTAACTTTATT | + |
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Preference number: 1 (lower is better) Translates to: LAHSTWSLGTELNNC*ALSPAPILRHFNFI Trigger: AATAAAGTTAAAATGTCTTAGAATAGGAGCTGGAGAGAGAGCTCAGCAGTTGTTGAGTTCAGTTCCCAGGCTCCACGTTGAGTGGGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CCA 90 bp | TTCCATACCTGTTTAATTAAACATGACTTTGTGCCAAAGCAGAGATaGATGGCTCAGTGGTTAAGAACACCGGCAGCTCACACAGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: FHTCLIKHDFVPKQR*MAQWLRTPAAHTAY Trigger: GTAAGCTGTGTGAGCTGCCGGTGTTCTTAACCACTGAGCCATCCATCTCTGCTTTGGCACAAAGTCATGTTTAATTAAACAGGTATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CCA 90 bp | TATCATATGGAGGGTTGTCCTTTAATCTCAGGAGTCAGAAACAGGTaGATCTCTGAGTTTGAGGCCAGCCTAGTACTCAGAGTAAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: YHMEGCPLISGVRNR*ISEFEASLVLRVSF Trigger: GAAACTTACTCTGAGTACTAGGCTGGCCTCAAACTCAGAGATCCACCTGTTTCTGACTCCTGAGATTAAAGGACAACCCTCCATATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232514.2 |
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| 3UTR CAA 90 bp | CTTGGGTCAGGCGTGGGTGGCTGCTCCACAGGTCTCCCTGCCACCTaGCTCAAAGCCTGCTCAGGGCAGGGCTGGACAGGACAAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: LGSGVGGCSTGLPAT*LKACSGQGWTGQGM Trigger: CATGCCTTGTCCTGTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAGCAGCCACCCACGCCTGACCCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAGGGAGGGAAAAGCCACCCTGTTCCTGGGCTGTCCCAGCAGCTGCTCTGAGTGGTGGCCTGCTGTaGTCAGGAGTGGGAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SRGREKPPCSWAVPAAALSGGLL*SGVGAL Trigger: GAGAGCTCCCACTCCTGAGCACAGCAGGCCACCACT...CAGAGCAGCTGCTGGGACAGCCCAGGAACAGGGTGGCTTTTCCCTCCCTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGGGAGGGAAAAGCCACCCTGTTCCTGGGCTGTCCCAGCAGCTGCTCTGGGGGAGCTGGGGCCTTaGTCTGTGGAAGTGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: SRGREKPPCSWAVPAAALGELGP*SVEVGI Trigger: GATTCCCACTTCCACAGACCAAGGCCCCAGCTCCCC...CAGAGCAGCTGCTGGGACAGCCCAGGAACAGGGTGGCTTTTCCCTCCCTCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CAA 90 bp | AAGCCCAGAGGGACACCACTGACTCCAAGGCAGGGCAGGCCATGGTaGTCAACAATGGGGCTGAGAGTCCCTGAGAGGGGCTGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: KPRGTPLTPRQGRPW*STMGLRVPERGCWH Trigger: ATGCCAGCAGCCCCTCTCAGGGACTCTCAGCCCCATTGTTGACAACCATGGCCTGCCCTGCCTTGGAGTCAGTGGTGTCCCTCTGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTCCCTTCTCAGGAGCCTCAACTGTGGCCAGTGCCAGGGGCCTGCCCTGTACACGCCAACTGAGATaGGACAGCCTCACAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: CPPFSGASTVASARGLPCTRQLR*DSLTGL Trigger: CAGTCCTGTGAGGCTGTCTCATCTCAGTTGGCGTGT...ACAGGGCAGGCCCCTGGCACTGGCCACAGTTGAGGCTCCTGAGAAGGGAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCACAGGTCTCCCTGCCACCTTGCTCAAAGCCTGCTCAGGGCAGGGCTGGACGAAAGCAAGGTTTCTTaGGGCAATCTTCTCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: LHRSPCHLAQSLLRAGLDESKVS*GNLLHR Trigger: CCTGTGGAGAAGATTGCCTCAAGAAACCTTGCTTTC...GTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAGAGACAGTAAGGGAACTTGGTGCCAGGGGCCCCTCCTCTGCCTAAGTGTGCCTTCGAGGGTCTaGGCCTCTGCACAGTCAACA | + |
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Preference number: 2 (lower is better) Translates to: TQRDSKGTWCQGPLLCLSVPSRV*ASAQST Trigger: TGTTGACTGTGCAGAGGCCCAGACCCTCGAAGGCAC...ACTTAGGCAGAGGAGGGGCCCCTGGCACCAAGTTCCCTTACTGTCTCTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CAA 90 bp | TCTAGCACCACCCTCACTCTCCCTATCAGGCACCATCACATCGTTTaGTGCCTTCGAGGGTCTGGGCCTCTGCACAGTCAACACGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SSTTLTLPIRHHHIV*CLRGSGPLHSQHAN Trigger: GTTGGCGTGTTGACTGTGCAGAGGCCCAGACCCTCGAAGGCACAAAACGATGTGATGGTGCCTGATAGGGAGAGTGAGGGTGGTGCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAGAGACAGTAAGGGAACTTGGTGCCAGGGGCCCCTCCTCTGCCTAAGTCTGCCCCAACCTATTTaGCTCTTTGGAGAGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: TQRDSKGTWCQGPLLCLSLPQPI*LFGEWG Trigger: TCCCCACTCTCCAAAGAGCCAAATAGGTTGGGGCAG...ACTTAGGCAGAGGAGGGGCCCCTGGCACCAAGTTCCCTTACTGTCTCTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTCCCTTCTCAGGAGCCTCAACTGTGGCCAGTGCCAGGGGCCTGCCCTGTGTGCTTTCACAGAAATaGTACCCAAATCTGACATAT | + |
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Preference number: 2 (lower is better) Translates to: CPPFSGASTVASARGLPCVLSQK*YPNLTY Trigger: ATATGTCAGATTTGGGTAGCATTTCTGTGAAAGCAC...ACAGGGCAGGCCCCTGGCACTGGCCACAGTTGAGGCTCCTGAGAAGGGAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAGAGACAGTAAGGGAACTTGGTGCCAGGGGCCCCTCCTCTGCCTAAGTGTAACCTGTTGCTTCTaGTTTCATCCTAGAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: TQRDSKGTWCQGPLLCLSVTCCF*FHPRAP Trigger: AGGGGCTCTAGGATGAAAGCAGAAGCAACAGGTTAC...ACTTAGGCAGAGGAGGGGCCCCTGGCACCAAGTTCCCTTACTGTCTCTCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTCTCCCTGCCACCTTGCTCAAAGCCTGCTCAGGGCAGGGCTGGACAGGATTCAGAAAAGCAACATaGACAAAATGGTGGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: TGLPATLLKACSGQGWTGFRKAT*TKWWFA Trigger: AGCAAACCACCATTTTGTTCATGTTGCTTTTCTGAA...TCCTGTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCTCCCCAGCATTGCATGTACACGGTGCACAAATATACATTCAGGCAAACAGGGGCCCCTCCTCTaGCTAAGTATGCACCCACCT | + |
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Preference number: 2 (lower is better) Translates to: SELPSIACTRCTNIHSGKQGPLL*LSMHPP Trigger: AGGTGGGTGCATACTTAGGCAGAGGAGGGGCCCCTG...TTTGCCTGAATGTATATTTGTGCACCGTGTACATGCAATGCTGGGGAGCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGACGGGTAACAGGCAGGTAGAGCTAAGCAATGAGACAGCTGGACTATCTACCCACAGGCAGTGTTaGCACAGGAAACGTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: AVTGNRQVELSNETAGLSTHRQC*HRKRCQ Trigger: CTGACAACGTTTCCTGTGCCAACACTGCCTGTGGGT...AGATAGTCCAGCTGTCTCATTGCTTAGCTCTACCTGCCTGTTACCCGTCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAGAGGACCTGAGTTCCTTAGCACTCATGTGGCATTTCACAAGAGATTTGAGGCCTAGGAGATGGTaGAGCATGTGCATCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SLEDLSSLALMWHFTRDLRPRRW*SMCIPG Trigger: CCCTGGGATGCACATGCTTCACCATCTCCTAGGCCT...CAAATCTCTTGTGAAATGCCACATGAGTGCTAAGGAACTCAGGTCCTCTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGATGACCAGGTCTACCACAGCTTCAGGAAGGGCTGCTGACTGTGAGAAGCGGCTTCTCTTTGTTTaGATGGATGTTCCTTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SVMTRSTTASGRAADCEKRLLFV*MDVPLG Trigger: TCCCAAAGGAACATCCATGCAAACAAAGAGAAGCCG...CTTCTCACAGTCAGCAGCCCTTCCTGAAGCTGTGGTAGACCTGGTCATCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTAAGGTTAAAGCAGAAAGCAAGGTTTCTTGAGGCAATCTTCTCCACAGGAACCTCTGTGGGGAGCTaGGGCCTTGGTCTGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ELRLKQKARFLEAIFSTGTSVGS*GLGLWK Trigger: CTTCCACAGACCAAGGCCCCAGCTCCCCACAGAGGT...TCCTGTGGAGAAGATTGCCTCAAGAAACCTTGCTTTCTGCTTTAACCTTAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAGAGGACCTGAGTTCCTTAGCACTCATGTGGCATTTCACAAGAGATTTGAGCCTCACAGGACTGTaGGGTCTCAGCAGCACTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLEDLSSLALMWHFTRDLSLTGL*GLSSTS Trigger: AGAAGTGCTGCTGAGACCTCACAGTCCTGTGAGGCT...CAAATCTCTTGTGAAATGCCACATGAGTGCTAAGGAACTCAGGTCCTCTAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGATGACCAGGTCTACCACAGCTTCAGGAAGGGCTGCTGACTGTGAGAAGTCTGCTCAAACTTGCTaGAATCACTCATGGCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: SVMTRSTTASGRAADCEKSAQTC*NHSWQI Trigger: AATCTGCCATGAGTGATTCCAGCAAGTTTGAGCAGA...CTTCTCACAGTCAGCAGCCCTTCCTGAAGCTGTGGTAGACCTGGTCATCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTCGTGGATGCTACAGAGGTTATTGAATCACCTGCAACTGTAGTTAAAGATTCCAGGCAAGGTCCCTaGCTGAAAGCTCGGACACAC | + |
|
Preference number: 2 (lower is better) Translates to: VFVDATEVIESPATVVKDSRQGP*LKARTH Trigger: GTGTGTCCGAGCTTTCAGTCAGGGACCTTGCCTGGA...ATCTTTAACTACAGTTGCAGGTGATTCAATAACCTCTGTAGCATCCACGAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTTTATTAAGGACAGAATGGGGTCACAGCATCTTAGAAAGCCTATTCTCTTCCCAGCAGCTGCTCTaGGAGAGGCAGAGCCATCGT | + |
|
Preference number: 2 (lower is better) Translates to: TFLLRTEWGHSILESLFSSQQLL*ERQSHR Trigger: ACGATGGCTCTGCCTCTCTCAGAGCAGCTGCTGGGA...AGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCTGTCCTTAATAAAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTTTATTAAGGACAGAATGGGGTCACAGCATCTTAGAAAGCCTATTCTCTACAGGCCCAGGGCTCTaGCCATCCTGGGCATATGGA | + |
|
Preference number: 2 (lower is better) Translates to: TFLLRTEWGHSILESLFSTGPGL*PSWAYG Trigger: TCCATATGCCCAGGATGGTCAGAGCCCTGGGCCTGT...AGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCTGTCCTTAATAAAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATTTTTATTAAGGACAGAATGGGGTCACAGCATCTTAGAAAGCCTATTCTCTCTCCACAGGTCTCCCTaGCACCTTGCTCAAAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TFLLRTEWGHSILESLFSLHRSP*HLAQSL Trigger: CAGGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAG...AGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCTGTCCTTAATAAAAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAACTAAGGTTAAAGCAGAAAGCAAGGTTTCTTGAGGCAATCTTCTCCACAAGTGGGAGCTCTCCTTaGCACATCCTATCAGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: IELRLKQKARFLEAIFSTSGSSP*HILSEL Trigger: AAGCTCTGATAGGATGTGCCAAGGAGAGCTCCCACT...TGTGGAGAAGATTGCCTCAAGAAACCTTGCTTTCTGCTTTAACCTTAGTTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTAGAGGACCTGAGTTCCTTAGCACTCATGTGGCATTTCACAAGAGATTTGGTCCAATCCTATTCATaGAGAATAAGCAGCACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLEDLSSLALMWHFTRDLVQSYS*RISSTK Trigger: CTTTGTGCTGCTTATTCTCCATGAATAGGATTGGAC...CAAATCTCTTGTGAAATGCCACATGAGTGCTAAGGAACTCAGGTCCTCTAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTTTATTAAGGACAGAATGGGGTCACAGCATCTTAGAAAGCCTATTCTCTGAAAGCAAGGTTTCTTaGGGCAATCTTCTCCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: TFLLRTEWGHSILESLFSESKVS*GNLLHR Trigger: CCTGTGGAGAAGATTGCCTCAAGAAACCTTGCTTTC...AGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCTGTCCTTAATAAAAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTAGAGGACCTGAGTTCCTTAGCACTCATGTGGCATTTCACAAGAGATTTGAAAAGAATAGAAAACTaGCCCAACCTATTTGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLEDLSSLALMWHFTRDLKRIEN*PNLFGS Trigger: AGAGCCAAATAGGTTGGGGCAGTTTTCTATTCTTTT...CAAATCTCTTGTGAAATGCCACATGAGTGCTAAGGAACTCAGGTCCTCTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGTAGCCCGGAAGTTATAGAACTAAGGTTAAAGCAGAAAGCAAGGTTTCTTTCTGCTCAAACTTGCTaGAATCACTCATGGCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: LGSPEVIELRLKQKARFLSAQTC*NHSWQI Trigger: AATCTGCCATGAGTGATTCCAGCAAGTTTGAGCAGA...AAGAAACCTTGCTTTCTGCTTTAACCTTAGTTCTATAACTTCCGGGCTACCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR TCA 72 bp | AGAGCCATCGTGGCTGACCCCGCTGAGGGTAAGCCGTaGGGAGGGTGGCAGTGGTGGCCTGCTGTGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAIVADPAEGKP*GGWQWWPAVLR Trigger: CCTGAGCACAGCAGGCCACCACTGCCACCCTCCTCACGGCTTACCCTCAGCGGGGTCAGCCACGATGGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR TCA 72 bp | CCGGGCACTTCAAGGAACCAGGGGGATGTGGATTCCTaGGCCAGCTTGGGTCAGGCGTGGGTGGCTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PGTSRNQGDVDS*ASLGQAWVAAP Trigger: TGGAGCAGCCACCCACGCCTGACCCAAGCTGGCTCAGGAATCCACATCCCCCTGGTTCCTTGAAGTGCCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR GCA 72 bp | ACCCACAGGCAGTGTTGGCACAGGAAACGTTGTCAGTaGTGCGGCCACCTCTGTGGGGAGCTGGGGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: THRQCWHRKRCQ*CGHLCGELGPW Trigger: CCAAGGCCCCAGCTCCCCACAGAGGTGGCCGCAGCACTGACAACGTTTCCTGTGCCAACACTGCCTGTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR GCA 72 bp | GGAAAAGCCACCCTGTTCCTGGGCTGTCCCAGCAGCTaGTCTGAGAGAGGCAGAGCCATCGTGGCTGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: GKATLFLGCPSS*SERGRAIVADP Trigger: GGGGTCAGCCACGATGGCTCTGCCTCTCTCAGAGCAGCTGCTGGGACAGCCCAGGAACAGGGTGGCTTTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR GCA 72 bp | GGATTCCTGAGCCAGCTTGGGTCAGGCGTGGGTGGCTaGTCCACAGGTCTCCCTGCCACCTTGCTCAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GFLSQLGSGVGG*STGLPATLLKA Trigger: GGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAGCAGCCACCCACGCCTGACCCAAGCTGGCTCAGGAATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR CCA 72 bp | CCTGCCACCTTGCTCAAAGCCTGCTCAGGGCAGGGCTaGACAGGACAAGGCATGCAAGCCCAGAGGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: PATLLKACSGQG*TGQGMQAQRDT Trigger: GGTGTCCCTCTGGGCTTGCATGCCTTGTCCTGTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR CCA 72 bp | CAAGGAACCAGGGGGATGTGGATTCCTGAGCCAGCTTaGGTCAGGCGTGGGTGGCTGCTCCACAGGTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QGTRGMWIPEPA*VRRGWLLHRSP Trigger: GGGAGACCTGTGGAGCAGCCACCCACGCCTGACCCAAGCTGGCTCAGGAATCCACATCCCCCTGGTTCCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR CCA 72 bp | GACGAGACCCGGGCACTTCAAGGAACCAGGGGGATGTaGATTCCTGAGCCAGCTTGGGTCAGGCGTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DETRALQGTRGM*IPEPAWVRRGW Trigger: CCACCCACGCCTGACCCAAGCTGGCTCAGGAATCCACATCCCCCTGGTTCCTTGAAGTGCCCGGGTCTCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCACAGGTCTCCCTGCCACCTTGCTCAAAGCCTGCTCAGGGCAGGGCTGGACTGGGGAGCTGGGGCCTaGGTCTGTGGAAGTGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LHRSPCHLAQSLLRAGLDWGAGA*VCGSGN Trigger: ATTCCCACTTCCACAGACCAAGGCCCCAGCTCCCCA...GTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR GCA 72 bp | AGCCTCAACTGTGGCCAGTGCCAGGGGCCTGCCCTGTaGAGAAGCACTTCTCTCCAGGCAAGGTCCCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: SLNCGQCQGPAL*RSTSLQARSLT Trigger: AGTCAGGGACCTTGCCTGGAGAGAAGTGCTTCTGCACAGGGCAGGCCCCTGGCACTGGCCACAGTTGAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR GCA 72 bp | TCTCAGGAGCCTCAACTGTGGCCAGTGCCAGGGGCCTaGCCTGTGCAGAAGCACTTCTCTCCAGGCAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SQEPQLWPVPGA*PVQKHFSPGKV Trigger: GACCTTGCCTGGAGAGAAGTGCTTCTGCACAGGGCAGGCCCCTGGCACTGGCCACAGTTGAGGCTCCTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR GCA 72 bp | ATGTCCTCCCTTCTCAGGAGCCTCAACTGTGGCCAGTaGCAGGGGCCTGCCCTGTGCAGAAGCACTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: MSSLLRSLNCGQ*QGPALCRSTSL Trigger: GAGAGAAGTGCTTCTGCACAGGGCAGGCCCCTGGCACTGGCCACAGTTGAGGCTCCTGAGAAGGGAGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR CCA 72 bp | GCACAGGAAACGTTGTCAGTGCTGCGGCCACCTCTGTaGGGAGCTGGGGCCTTGGTCTGTGGAAGTGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: AQETLSVLRPPL*GAGALVCGSGN Trigger: ATTCCCACTTCCACAGACCAAGGCCCCAGCTCCCCACAGAGGTGGCCGCAGCACTGACAACGTTTCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR CCA 72 bp | AGGAGGGTGGCAGTGGTGGCCTGCTGTGCTCAGGAGTaGGAGCTCTCCTTGGCACATCCTATCAGAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRVAVVACCAQE*ELSLAHPIRAW Trigger: CCAAGCTCTGATAGGATGTGCCAAGGAGAGCTCCCACTCCTGAGCACAGCAGGCCACCACTGCCACCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR CCA 72 bp | GGGGTGCGTGAGCTACTCATTACCCACAGGCAGTGTTaGCACAGGAAACGTTGTCAGTGCTGCGGCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: GVRELLITHRQC*HRKRCQCCGHL Trigger: GAGGTGGCCGCAGCACTGACAACGTTTCCTGTGCCAACACTGCCTGTGGGTAATGAGTAGCTCACGCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR CCA 72 bp | AGAGGGACACCACTGACTCCAAGGCAGGGCAGGCCATaGTTGTCAACAATGGGGCTGAGAGTCCCTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGTPLTPRQGRP*LSTMGLRVPER Trigger: CCTCTCAGGGACTCTCAGCCCCATTGTTGACAACCATGGCCTGCCCTGCCTTGGAGTCAGTGGTGTCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR TCA 72 bp | CGAGGGTCTGGGCCTCTGCACAGTCAACACGCCAACTaGGATGAGACAGCCTCACAGGACTGTGAGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGSGPLHSQHAN*DETASQDCEVS Trigger: TGAGACCTCACAGTCCTGTGAGGCTGTCTCATCTCAGTTGGCGTGTTGACTGTGCAGAGGCCCAGACCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR GCA 72 bp | TGCTGGCAGACCCTCCCTCCAAGGTCACCACAAACCTaGTATAACAGGTTCCCTGCAGAGACCCAGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CWQTLPPRSPQT*YNRFPAETQPA Trigger: TGCTGGCTGGGTCTCTGCAGGGAACCTGTTATAGCAGGTTTGTGGTGACCTTGGAGGGAGGGTCTGCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGCCCAGGGCTCTGACCATCCTGGGCATATGGAAGTCTCCAGAAACCTGCCCAGTAGCAGAAGTGAGTaGGTGAACATGGGCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QAQGSDHPGHMEVSRNLPSSRSE*VNMGSQ Trigger: CTGACTGCCCATGTTCACCAACTCACTTCTGCTACT...GGGCAGGTTTCTGGAGACTTCCATATGCCCAGGATGGTCAGAGCCCTGGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 ENSMUST00000232668.2 |
||
| 3UTR TCA 72 bp | CCCTGTGCAGAAGCACTTCTCTCCAGGCAAGGTCCCTaGCTGAAAGCTCGGACACACACAGCCACACCTACT | + |
|
Preference number: 3 (lower is better) Translates to: PCAEALLSRQGP*LKARTHTATPT Trigger: AGTAGGTGTGGCTGTGTGTGTCCGAGCTTTCAGTCAGGGACCTTGCCTGGAGAGAAGTGCTTCTGCACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR TCA 72 bp | GTGGCTATTAGCCCACTCAACGTGGAGCCTGGGAACTaGACTCAACAACTGCTGAGCTCTCTCTCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAISPLNVEPGN*TQQLLSSLSSS Trigger: GGAGCTGGAGAGAGAGCTCAGCAGTTGTTGAGTTCAGTTCCCAGGCTCCACGTTGAGTGGGCTAATAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR GCA 72 bp | CTCACTCTCCCTATCAGGCACCATCACATCGTTTTGTaGCTTCGAGGGTCTGGGCCTCTGCACAGTCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: LTLPIRHHHIVL*LRGSGPLHSQH Trigger: GTGTTGACTGTGCAGAGGCCCAGACCCTCGAAGGCACAAAACGATGTGATGGTGCCTGATAGGGAGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR CCA 72 bp | GAGAAGTCCATCACACAAGCGCACTGTATTCTCTGCTaGCAGACCCTCCCTCCAAGGTCACCACAAACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EKSITQAHCILC*QTLPPRSPQTC Trigger: GCAGGTTTGTGGTGACCTTGGAGGGAGGGTCTGCCAGCAGAGAATACAGTGCGCTTGTGTGATGGACTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR TCA 72 bp | CACAGGATTAGACCCCTAGTAGCAGAAGTGAGTTGGTaGACATGGGCAGTCAGGCCATCAGCTTCCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HRIRPLVAEVSW*TWAVRPSASSG Trigger: CCCTGAGGAAGCTGATGGCCTGACTGCCCATGTTCACCAACTCACTTCTGCTACTAGGGGTCTAATCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 ENSMUST00000232668.2 |
||
| 3UTR TCA 72 bp | GTGCAGAAGCACTTCTCTCCAGGCAAGGTCCCTGACTaGAAGCTCGGACACACACAGCCACACCTACTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VQKHFSPGKVPD*KLGHTQPHLLL Trigger: TAGAAGTAGGTGTGGCTGTGTGTGTCCGAGCTTTCAGTCAGGGACCTTGCCTGGAGAGAAGTGCTTCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR GCA 72 bp | AGAATGGGGTCACAGCATCTTAGAAAGCCTATTCTCTaGCATTGTGGGAAGAGCAGGACGAGACCCGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RMGSQHLRKPIL*HCGKSRTRPGH Trigger: GTGCCCGGGTCTCGTCCTGCTCTTCCCACAATGGCAGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR GCA 72 bp | GGGGAGCACCCCCAGCCTGAAACAGCAGTATTGGGCTaGATATGCAGCAATGAAGATAAAGGAGGCCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GEHPQPETAVLG*ICSNEDKGGLG Trigger: TCCTAGGCCTCCTTTATCTTCATTGCTGCATATGCAGCCCAATACTGCTGTTTCAGGCTGGGGGTGCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR CCA 72 bp | AGAGTGGGGAGCACCCCCAGCCTGAAACAGCAGTATTaGGCTGCATATGCAGCAATGAAGATAAAGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RVGSTPSLKQQY*AAYAAMKIKEA Trigger: GGCCTCCTTTATCTTCATTGCTGCATATGCAGCCCAATACTGCTGTTTCAGGCTGGGGGTGCTCCCCACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR CCA 72 bp | ACATTCAGGCAAACACAGAGAGACAGTAAGGGAACTTaGTGCCAGGGGCCCCTCCTCTGCCTAAGTATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TFRQTQRDSKGT*CQGPLLCLSMH Trigger: GTGCATACTTAGGCAGAGGAGGGGCCCCTGGCACCAAGTTCCCTTACTGTCTCTCTGTGTTTGCCTGAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR CCA 72 bp | CACACTAAGTATGTAGAGAGGCAGGGGCTAGAGAGATaGCTCTCTAGAGGACCTGAGTTCCTTAGCACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HTKYVERQGLER*LSRGPEFLSTH Trigger: ATGAGTGCTAAGGAACTCAGGTCCTCTAGAGAGCCATCTCTCTAGCCCCTGCCTCTCTACATACTTAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR CCA 72 bp | CATGACTTTGTGCCAAAGCAGAGATGGATGGCTCAGTaGTTAAGAACACCGGCAGCTCACACAGCTTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: HDFVPKQRWMAQ*LRTPAAHTAYN Trigger: GTTGTAAGCTGTGTGAGCTGCCGGTGTTCTTAACCACTGAGCCATCCATCTCTGCTTTGGCACAAAGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAGAAGTCCATCACACAAGCGCACTGTATTCTCTGCTGGCAGACCCTCCCTGGGCTAACTGCAACTTaGAGTAAATTTGGGCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CEKSITQAHCILCWQTLPGLTAT*SKFGQE Trigger: TTCTTGCCCAAATTTACTCAAAGTTGCAGTTAGCCC...AGGGAGGGTCTGCCAGCAGAGAATACAGTGCGCTTGTGTGATGGACTTCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGATGACCAGGTCTACCACAGCTTCAGGAAGGGCTGCTGACTGTGAGAAGAAAGACGGCTTCTCTTaGTTTGCATGGATGTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVMTRSTTASGRAADCEKKDGFS*FAWMFL Trigger: AAGGAACATCCATGCAAACAAAGAGAAGCCGTCTTT...CTTCTCACAGTCAGCAGCCCTTCCTGAAGCTGTGGTAGACCTGGTCATCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
||
| 3UTR TCA 72 bp | GAGGAACGAACCCAGGTTCTCAGGAACAACATCCAGTaGACCATCTATGCAAACGGTGGTTATAATACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EERTQVLRNNIQ*TIYANGGYNTA Trigger: GGCTGTATTATAACCACCGTTTGCATAGATGGTTCACTGGATGTTGTTCCTGAGAACCTGGGTTCGTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR TCA 72 bp | ACTCATGTGGCATTTCACAAGAGATTTGATGCCATCTaGGCTCCCCAGCATTGCATGTACACGGTGCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: THVAFHKRFDAI*APQHCMYTVHK Trigger: TTTGTGCACCGTGTACATGCAATGCTGGGGAGCTCAGATGGCATCAAATCTCTTGTGAAATGCCACATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR TCA 72 bp | TCAACGTGGAGCCTGGGAACTGAACTCAACAACTGCTaGGCTCTCTCTCCAGCTCCTATTCTAAGACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: STWSLGTELNNC*ALSPAPILRHF Trigger: AAAATGTCTTAGAATAGGAGCTGGAGAGAGAGCTCAGCAGTTGTTGAGTTCAGTTCCCAGGCTCCACGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR GCA 72 bp | CCTGTTGCTTCTGCTTTCATCCTAGAGCCCCTCCATTaGTATCAAGTCCAATCCTATTCATGGAGAATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PVASAFILEPLH*YQVQSYSWRIS Trigger: GCTTATTCTCCATGAATAGGATTGGACTTGATAGCAATGGAGGGGCTCTAGGATGAAAGCAGAAGCAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR TCA 72 bp | AGCAGCCAGGAAACAAAACCAGACAAACACCAATGCTaGACACAAAAGCACCTATCGTATGGCCACAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSQETKPDKHQC*TQKHLSYGHNS Trigger: ACTATTGTGGCCATACGATAGGTGCTTTTGTGTTCAGCATTGGTGTTTGTCTGGTTTTGTTTCCTGGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
||
| 3UTR CCA 72 bp | TGTTTAATTAAACATGACTTTGTGCCAAAGCAGAGATaGATGGCTCAGTGGTTAAGAACACCGGCAGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CLIKHDFVPKQR*MAQWLRTPAAH Trigger: GTGAGCTGCCGGTGTTCTTAACCACTGAGCCATCCATCTCTGCTTTGGCACAAAGTCATGTTTAATTAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 72 bp | CATCCACCTACACACCACAAGCACCATGACATTATCTaGAAGGAGTCATCAATGAAAACGTTCCTAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: HPPTHHKHHDII*KESSMKTFLRT Trigger: TGTCCTTAGGAACGTTTTCATTGATGACTCCTTTCAGATAATGTCATGGTGCTTGTGGTGTGTAGGTGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 72 bp | GAAGGTGAAACATCCACCTACACACCACAAGCACCATaGCATTATCTGAAAGGAGTCATCAATGAAAACGTT | + |
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Preference number: 3 (lower is better) Translates to: EGETSTYTPQAP*HYLKGVINENV Trigger: AACGTTTTCATTGATGACTCCTTTCAGATAATGTCATGGTGCTTGTGGTGTGTAGGTGGATGTTTCACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR GCA 72 bp | ACAGACACTGTAGCTAGCTGTGTGCTTTCACAGAAATaGTACCCAAATCTGACATATCTTGTCTTGAACCTA | + |
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Preference number: 3 (lower is better) Translates to: TDTVASCVLSQK*YPNLTYLVLNL Trigger: TAGGTTCAAGACAAGATATGTCAGATTTGGGTAGCATTTCTGTGAAAGCACACAGCTAGCTACAGTGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR TCA 72 bp | TATAGAACTAAGGTTAAAGCAGAAAGCAAGGTTTCTTaGGGCAATCTTCTCCACAGGATTAGACCCCTAGTA | + |
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Preference number: 3 (lower is better) Translates to: YRTKVKAESKVS*GNLLHRIRPLV Trigger: TACTAGGGGTCTAATCCTGTGGAGAAGATTGCCTCAAGAAACCTTGCTTTCTGCTTTAACCTTAGTTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 ENSMUST00000232668.2 |
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| 3UTR-3UTR CAA 90 bp | ACATTTTTATTAAGGACAGAATGGGGTCACAGCATCTTAGAAAGCCTATTCTCTGGGCTAACTGCAACTTaGAGTAAATTTGGGCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: TFLLRTEWGHSILESLFSGLTAT*SKFGQE Trigger: TTCTTGCCCAAATTTACTCAAAGTTGCAGTTAGCCC...AGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCTGTCCTTAATAAAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CAA 72 bp | GGCGTGGGTGGCTGCTCCACAGGTCTCCCTGCCACCTaGCTCAAAGCCTGCTCAGGGCAGGGCTGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: GVGGCSTGLPAT*LKACSGQGWTG Trigger: TCCTGTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAGCAGCCACCCACGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CAA 72 bp | ACCCTCACTCTCCCTATCAGGCACCATCACATCGTTTaGTGCCTTCGAGGGTCTGGGCCTCTGCACAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TLTLPIRHHHIV*CLRGSGPLHSQ Trigger: TTGACTGTGCAGAGGCCCAGACCCTCGAAGGCACAAAACGATGTGATGGTGCCTGATAGGGAGAGTGAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CAA 72 bp | GAGAGTGGGGAGCACCCCCAGCCTGAAACAGCAGTATaGGGCTGCATATGCAGCAATGAAGATAAAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ESGEHPQPETAV*GCICSNEDKGG Trigger: GCCTCCTTTATCTTCATTGCTGCATATGCAGCCCAATACTGCTGTTTCAGGCTGGGGGTGCTCCCCACTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| CDS-3UTR CCA 90 bp | CCTCCATTGCTATCAAGTCCAATCCTATTCATGGAGAATAAGCAGCACAAAGAGGCATGCCTCTCACCTTaGTCAGTCTTGGTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PPLLSSPILFMENKQHKEACLSP*SVLVAG Trigger: GCCAGCCACCAAGACTGACCAAGGTGAGAGGCATGC...CTCTTTGTGCTGCTTATTCTCCATGAATAGGATTGGACTTGATAGCAATGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| CDS-3UTR GCA 90 bp | CCTCCATTGCTATCAAGTCCAATCCTATTCATGGAGAATAAGCAGCACAAAGAGCAGGGAGAAGAAAGGTaGATGCCTCTCACCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PPLLSSPILFMENKQHKEQGEER*MPLTLV Trigger: GACCAAGGTGAGAGGCATGCACCTTTCTTCTCCCTG...CTCTTTGTGCTGCTTATTCTCCATGAATAGGATTGGACTTGATAGCAATGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| 3UTR CAA 72 bp | GGAGTGGGAGCTCTCCTTGGCACATCCTATCAGAGCTaGGTGGTAGAGAAGCTTGAAATTTCAAAAGAATAT | + |
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Preference number: 4 (lower is better) Translates to: GVGALLGTSYQS*VVEKLEISKEY Trigger: ATATTCTTTTGAAATTTCAAGCTTCTCTACCACCAAGCTCTGATAGGATGTGCCAAGGAGAGCTCCCACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090192.12 ENSMUST00000232139.2 |
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| 3UTR CAA 72 bp | ACCTGTTGCTTCTGCTTTCATCCTAGAGCCCCTCCATaGCTATCAAGTCCAATCCTATTCATGGAGAATAAG | + |
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Preference number: 4 (lower is better) Translates to: TCCFCFHPRAPP*LSSPILFMENK Trigger: CTTATTCTCCATGAATAGGATTGGACTTGATAGCAATGGAGGGGCTCTAGGATGAAAGCAGAAGCAACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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| CDS-3UTR CAA 90 bp | GTGTTCGTGGATGCTACAGAGGTTATTGAATCACCTGCAACTGTAGTTAAAGATTGCATGCCTCTCACCTaGGTCAGTCTTGGTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VFVDATEVIESPATVVKDCMPLT*VSLGGW Trigger: CCAGCCACCAAGACTGACCAAGGTGAGAGGCATGCA...ATCTTTAACTACAGTTGCAGGTGATTCAATAACCTCTGTAGCATCCACGAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232035.2 |
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