Pregenerated sensors for UBE2K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029203Ensembl transcript IDs: ENSMUST00000142407.8, ENSMUST00000201266.4, ENSMUST00000201292.4, ENSMUST00000201383.2, ENSMUST00000201984.4, ENSMUST00000202082.4, ENSMUST00000202601.4, ENSMUST00000202679.4
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTGATGCTCCTCAAGAGGCGAGAGCGATGCTGGCGCAGCTCCTGTaGCTCAGTTACTCAGAAGCAGTTCTGTTGCAGTCTCTACATCCC | + |
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Preference number: 1 (lower is better) Translates to: VDAPQEARAMLAQLL*LSYSEAVLLQSLHP Trigger: GGGATGTAGAGACTGCAACAGAACTGCTTCTGAGTAACTGAGGCACAGGAGCTGCGCCAGCATCGCTCTCGCCTCTTGAGGAGCATCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR GCA 90 bp | ACTGCATCTTGGGGGTCATCTGGTTCTGCAGCCGCCAACAGCGCTTaGAATGACAATAATACCGTGCGCAGAGTCATTGCTGCTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: TASWGSSGSAAANSA*NDNNTVRRVIAAAH Trigger: ATGGGCAGCAGCAATGACTCTGCGCACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR GCA 90 bp | CTGCTTGAACATTTCAGGATTCTGTTTGTACTGATTCGCTACTACTaGATCTTGGGGGTCATCTGGTTCTGCAGCCGCCAACAGCGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LLEHFRILFVLIRYY*ILGVIWFCSRQQRL Trigger: CAAGCGCTGTTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGTACAAACAGAATCCTGAAATGTTCAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR TCA 90 bp | GATTTAGAATACACCCCTGTTCCTATGTGCATCTGGTATATACAGTaGGACAGCACAGCTTTCATGGGTCACCATGGGGAGCAGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: DLEYTPVPMCIWYIQ*DSTAFMGHHGEQEE Trigger: CTCCTCCTGCTCCCCATGGTGACCCATGAAAGCTGTGCTGTCTCACTGTATATACCAGATGCACATAGGAACAGGGGTGTATTCTAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR TCA 90 bp | CATGAGAAACCCCAAGCAGTCTTGCTTATGAATCCCACACAGTCTTaGGCACACGGTTCTGACAGGAGGCGATGGCATAATCACGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: HEKPQAVLLMNPTQS*AHGSDRRRWHNHVK Trigger: TTTGACGTGATTATGCCATCGCCTCCTGTCAGAACCGTGTGCTCAAGACTGTGTGGGATTCATAAGCAAGACTGCTTGGGGTTTCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR TCA 90 bp | CAAAGTCGAGCTGTCTGCTTGAACATTTCAGGATTCTGTTTGTACTaGTTCGCTACTACTGCATCTTGGGGGTCATCTGGTTCTGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: QSRAVCLNISGFCLY*FATTASWGSSGSAA Trigger: GGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGTACAAACAGAATCCTGAAATGTTCAAGCAGACAGCTCGACTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR CCA 90 bp | CATCTGGTATATACAGTGAGACAGCACAGCTTTCATGGGTCACCATaGGGAGCAGGAGGAGTAAGTCAAGTGTCTGACAAAGGAAACTGT | + |
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Preference number: 1 (lower is better) Translates to: HLVYTVRQHSFHGSP*GAGGVSQVSDKGNC Trigger: ACAGTTTCCTTTGTCAGACACTTGACTTACTCCTCCTGCTCCCCATGGTGACCCATGAAAGCTGTGCTGTCTCACTGTATATACCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR GCA 90 bp | CCAAATTCATTTCAAACCCTTACCCCACCAAAACGTCATTTCCGGTaGTGCTACAGTAGGCTGCAAGAACATCTACTTCTCCTGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: PNSFQTLTPPKRHFR*CYSRLQEHLLLLQF Trigger: AAACTGCAGGAGAAGTAGATGTTCTTGCAGCCTACTGTAGCAGCACCGGAAATGACGTTTTGGTGGGGTAAGGGTTTGAAATGAATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR TCA 90 bp | TACTACTTACAAAGTGAAGAACTCGGACAAAACATTCCAAACCTATaGGCTAAAAGTGGAACAAGGGACACTGTTCCTCAGCACGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: YYLQSEELGQNIPNL*AKSGTRDTVPQHVS Trigger: GGAAACGTGCTGAGGAACAGTGTCCCTTGTTCCACTTTTAGCTCATAGGTTTGGAATGTTTTGTCCGAGTTCTTCACTTTGTAAGTAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR TCA 90 bp | GTAACTATGACCAGACACCTTCCTACCTTTTTCTTATCTAAACACTaGTCCCATCTTTATACAATATACCTGACTCCACTGCTCAATTCC | + |
|
Preference number: 1 (lower is better) Translates to: VTMTRHLPTFFLSKH*SHLYTIYLTPLLNS Trigger: GGAATTGAGCAGTGGAGTCAGGTATATTGTATAAAGATGGGATCAGTGTTTAGATAAGAAAAAGGTAGGAAGGTGTCTGGTCATAGTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTGTGGAGGACAGTGGCCCTCAGTCACTGAGAACTGTGACAGCCTTACAAACAGCACAGCTTTCATaGGTCACCATGGGGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FSVEDSGPQSLRTVTALQTAQLS*VTMGSR Trigger: CCTGCTCCCCATGGTGACCCATGAAAGCTGTGCTGT...TTGTAAGGCTGTCACAGTTCTCAGTGACTGAGGGCCACTGTCCTCCACACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | ACTACTGCATCTTGGGGGTCATCTGGTTCTGCAGCCGCCAACAGCGCTTGCAATATTGCTGCTGCCCATTaGTCTTTCAGGATATCCAAA | + |
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Preference number: 2 (lower is better) Translates to: TTASWGSSGSAAANSACNIAAAH*SFRISK Trigger: TTTGGATATCCTGAAAGATCAATGGGCAGCAGCAAT...ATTGCAAGCGCTGTTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTGTACTGATTCGCTACTACTGCATCTTGGGGGTCATCTGGTTCTGCAGCCGTGCGCAGAGTCATTaGTGCTGCCCATTGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: LFVLIRYYCILGVIWFCSRAQSH*CCPLIF Trigger: AAAGATCAATGGGCAGCAGCAATGACTCTGCGCACG...GCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGTACAAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR CAA 90 bp | AATAGGAGACACGATCAGAAAAAGCAGTGCTATGACCTGATCCACTaGCCTCAGAACCAAACAGACCTGGCCACACCTCATCATAGACGG | + |
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Preference number: 2 (lower is better) Translates to: NRRHDQKKQCYDLIH*PQNQTDLATPHHRR Trigger: CCGTCTATGATGAGGTGTGGCCAGGTCTGTTTGGTTCTGAGGCAAGTGGATCAGGTCATAGCACTGCTTTTTCTGATCGTGTCTCCTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | CACAGGCACAGAGGATCTGTGTTCAGACTTAAGGGAGCTGTGATTCTACACCACAAAAATAACAGGTGTTaGTGCTCCTCAAGAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: HRHRGSVFRLKGAVILHHKNNRC*CSSRGE Trigger: CTCGCCTCTTGAGGAGCATCAACACCTGTTATTTTT...GTGGTGTAGAATCACAGCTCCCTTAAGTCTGAACACAGATCCTCTGTGCCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | TTCAGACTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAAAAATAACAGGTGTTaGTGCTCCTCAAGAGGCGAG | + |
|
Preference number: 2 (lower is better) Translates to: FRLKGAVILHHNVKGRHSKNNRC*CSSRGE Trigger: CTCGCCTCTTGAGGAGCATCAACACCTGTTATTTTT...CGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAGTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTAAAAATAACAGGTGTTaGTGCTCCTCAAGAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: LKGAVILHHNVKGRHSSVKNNRC*CSSRGE Trigger: CTCGCCTCTTGAGGAGCATCAACACCTGTTATTTTT...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTGTGGAGGACAGTGGCCCTCAGTCACTGAGAACTGTGACAGCCTTACAAAGTAAGTCAAGTGTCTaGCAAAGGAAACTGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: FSVEDSGPQSLRTVTALQSKSSV*QRKLSG Trigger: GCCTGACAGTTTCCTTTGTCAGACACTTGACTTACT...TTGTAAGGCTGTCACAGTTCTCAGTGACTGAGGGCCACTGTCCTCCACACTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR GCA 90 bp | TTCAGACTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGTGCAGTCTCCAATGGTaGCTAGGTAACATCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: FRLKGAVILHHNVKGRHSCSLQW*LGNIIR Trigger: CCTAATGATGTTACCTAGGCACCATTGGAGACTGCA...CGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAGTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR GCA 90 bp | CACAGGCACAGAGGATCTGTGTTCAGACTTAAGGGAGCTGTGATTCTACACCACTGCAGTCTCCAATGGTaGCTAGGTAACATCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: HRHRGSVFRLKGAVILHHCSLQW*LGNIIR Trigger: CCTAATGATGTTACCTAGGCACCATTGGAGACTGCA...GTGGTGTAGAATCACAGCTCCCTTAAGTCTGAACACAGATCCTCTGTGCCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTTGCAGTCTCCAATGGTaGCTAGGTAACATCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: LKGAVILHHNVKGRHSSVCSLQW*LGNIIR Trigger: CCTAATGATGTTACCTAGGCACCATTGGAGACTGCA...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR GCA 90 bp | ACATTCCAAACCTATGAGCTAAAAGTGGAACAAGGGACACTGTTCCTCAGCACGTGCAGTCTCCAATGGTaGCTAGGTAACATCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: TFQTYELKVEQGTLFLSTCSLQW*LGNIIR Trigger: CCTAATGATGTTACCTAGGCACCATTGGAGACTGCA...CGTGCTGAGGAACAGTGTCCCTTGTTCCACTTTTAGCTCATAGGTTTGGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGGTGGTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAAAAAATAACAGGTGTTaGTGCTCCTCAAGAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: KRVVFSATRSKKSSTSMQKNNRC*CSSRGE Trigger: CTCGCCTCTTGAGGAGCATCAACACCTGTTATTTTT...TTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGACCACCCTTTT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | CCAAATTCATTTCAAACCCTTACCCCACCAAAACGTCATTTCCGGTGCTGCTACGTTTTCCTAACTGTATaGAACACCAGGATAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: PNSFQTLTPPKRHFRCCYVFLTV*NTRIRT Trigger: GGTCCTTATCCTGGTGTTTCATACAGTTAGGAAAAC...GTAGCAGCACCGGAAATGACGTTTTGGTGGGGTAAGGGTTTGAAATGAATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATGCAGTCTCCAATGGTaGCTAGGTAACATCATTAGG | + |
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Preference number: 2 (lower is better) Translates to: RTLKQTLESVTLLNTKVACSLQW*LGNIIR Trigger: CCTAATGATGTTACCTAGGCACCATTGGAGACTGCA...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | CCAAATTCATTTCAAACCCTTACCCCACCAAAACGTCATTTCCGGTGCTGCTACCTGCCTAAGTTCACTTaGACATTAATTAGGATGGTT | + |
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Preference number: 2 (lower is better) Translates to: PNSFQTLTPPKRHFRCCYLPKFT*TLIRMV Trigger: AACCATCCTAATTAATGTTCAAGTGAACTTAGGCAG...GTAGCAGCACCGGAAATGACGTTTTGGTGGGGTAAGGGTTTGAAATGAATTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR CCA 90 bp | CACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTGACAGGTTTTGCAGTCTCCAATaGTGCCTAGGTAACATCATT | + |
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Preference number: 2 (lower is better) Translates to: HKTQNKLTMRISALDGDRFCSLQ*CLGNII Trigger: AATGATGTTACCTAGGCACCATTGGAGACTGCAAAA...CCTGTCACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR CCA 90 bp | CACGTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATTTTTGCAGTCTCCAATaGTGCCTAGGTAACATCATT | + |
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Preference number: 2 (lower is better) Translates to: HVSHKTQNKLTMRISALDFCSLQ*CLGNII Trigger: AATGATGTTACCTAGGCACCATTGGAGACTGCAAAA...ATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAACGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATTTTGCAGTCTCCAATaGTGCCTAGGTAACATCATT | + |
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Preference number: 2 (lower is better) Translates to: RTLKQTLESVTLLNTKVAFCSLQ*CLGNII Trigger: AATGATGTTACCTAGGCACCATTGGAGACTGCAAAA...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR CCA 90 bp | CTAACAAACTGTTTAAGATCTAAAGAAGCCAACAAGCAAGGTTCTTTCAAAGTGTTTCATGGGTCACCATaGGGAGCAGGAGGAGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LTNCLRSKEANKQGSFKVFHGSP*GAGGVS Trigger: ACTTACTCCTCCTGCTCCCCATGGTGACCCATGAAA...CACTTTGAAAGAACCTTGCTTGTTGGCTTCTTTAGATCTTAAACAGTTTGTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR TCA 90 bp | ATTACTACTTACAAAGTGAAGAACTCGGACAAAACATTCCAAACCTATGAGCTAAAAAATAACAGGTGTTaGTGCTCCTCAAGAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: ITTYKVKNSDKTFQTYELKNNRC*CSSRGE Trigger: CTCGCCTCTTGAGGAGCATCAACACCTGTTATTTTT...TAGCTCATAGGTTTGGAATGTTTTGTCCGAGTTCTTCACTTTGTAAGTAGTAAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR CCA 90 bp | CTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATGTTTTCCCATGGTTTTATTTTGCAGTCTCCAATaGTGCCTAGGTAACATCATT | + |
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Preference number: 2 (lower is better) Translates to: LESVTLLNTKVACFPMVLFCSLQ*CLGNII Trigger: AATGATGTTACCTAGGCACCATTGGAGACTGCAAAA...TAAAACCATGGGAAAACATGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR CCA 90 bp | ATTACTACTTACAAAGTGAAGAACTCGGACAAAACATTCCAAACCTATGAGCTATTTTGCAGTCTCCAATaGTGCCTAGGTAACATCATT | + |
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Preference number: 2 (lower is better) Translates to: ITTYKVKNSDKTFQTYELFCSLQ*CLGNII Trigger: AATGATGTTACCTAGGCACCATTGGAGACTGCAAAA...TAGCTCATAGGTTTGGAATGTTTTGTCCGAGTTCTTCACTTTGTAAGTAGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR-3UTR GCA 90 bp | CTAACAAACTGTTTAAGATCTAAAGAAGCCAACAAGCAAGGTTCTTTCAAAGTGATAAAAGGATGTAGCTaGAACAGGAAATGTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LTNCLRSKEANKQGSFKVIKGCS*NRKCVH Trigger: ATGCACACATTTCCTGTTGCAGCTACATCCTTTTAT...CACTTTGAAAGAACCTTGCTTGTTGGCTTCTTTAGATCTTAAACAGTTTGTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR GCA 72 bp | CCTCAAGAGGCGAGAGCGATGCTGGCGCAGCTCCTGTaGCTCAGTTACTCAGAAGCAGTTCTGTTGCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: PQEARAMLAQLL*LSYSEAVLLQS Trigger: AGACTGCAACAGAACTGCTTCTGAGTAACTGAGGCACAGGAGCTGCGCCAGCATCGCTCTCGCCTCTTGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR GCA 72 bp | TGGGGGTCATCTGGTTCTGCAGCCGCCAACAGCGCTTaGAATGACAATAATACCGTGCGCAGAGTCATTGCT | + |
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Preference number: 3 (lower is better) Translates to: WGSSGSAAANSA*NDNNTVRRVIA Trigger: AGCAATGACTCTGCGCACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGCTGCAGAACCAGATGACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
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| 3UTR TCA 72 bp | CCCCAAGCAGTCTTGCTTATGAATCCCACACAGTCTTaGGCACACGGTTCTGACAGGAGGCGATGGCATAAT | + |
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Preference number: 3 (lower is better) Translates to: PQAVLLMNPTQS*AHGSDRRRWHN Trigger: ATTATGCCATCGCCTCCTGTCAGAACCGTGTGCTCAAGACTGTGTGGGATTCATAAGCAAGACTGCTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR TCA 72 bp | TACACCCCTGTTCCTATGTGCATCTGGTATATACAGTaGGACAGCACAGCTTTCATGGGTCACCATGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: YTPVPMCIWYIQ*DSTAFMGHHGE Trigger: CTCCCCATGGTGACCCATGAAAGCTGTGCTGTCTCACTGTATATACCAGATGCACATAGGAACAGGGGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR CCA 72 bp | GCATCTGGTATATACAGTGAGACAGCACAGCTTTCATaGGTCACCATGGGGAGCAGGAGGAGTAAGTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: ASGIYSETAQLS*VTMGSRRSKSS Trigger: ACTTGACTTACTCCTCCTGCTCCCCATGGTGACCCATGAAAGCTGTGCTGTCTCACTGTATATACCAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| 3UTR TCA 72 bp | ATAGGAGACACGATCAGAAAAAGCAGTGCTATGACCTaGTCCACTTGCCTCAGAACCAAACAGACCTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IGDTIRKSSAMT*STCLRTKQTWP Trigger: TGGCCAGGTCTGTTTGGTTCTGAGGCAAGTGGATCAGGTCATAGCACTGCTTTTTCTGATCGTGTCTCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR GCA 72 bp | CATTTCAGGATTCTGTTTGTACTGATTCGCTACTACTaGATCTTGGGGGTCATCTGGTTCTGCAGCCGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HFRILFVLIRYY*ILGVIWFCSRQ Trigger: TTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGTACAAACAGAATCCTGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
||
| 3UTR CCA 72 bp | TATACAGTGAGACAGCACAGCTTTCATGGGTCACCATaGGGAGCAGGAGGAGTAAGTCAAGTGTCTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: YTVRQHSFHGSP*GAGGVSQVSDK Trigger: TTTGTCAGACACTTGACTTACTCCTCCTGCTCCCCATGGTGACCCATGAAAGCTGTGCTGTCTCACTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR GCA 72 bp | TTTCAAACCCTTACCCCACCAAAACGTCATTTCCGGTaGTGCTACAGTAGGCTGCAAGAACATCTACTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FQTLTPPKRHFR*CYSRLQEHLLL Trigger: GAGAAGTAGATGTTCTTGCAGCCTACTGTAGCAGCACCGGAAATGACGTTTTGGTGGGGTAAGGGTTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR GCA 72 bp | GTAGGTGACAATAGGAGACACGATCAGAAAAAGCAGTaGTATGACCTGATCCACTTGCCTCAGAACCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: VGDNRRHDQKKQ*YDLIHLPQNQT Trigger: TGTTTGGTTCTGAGGCAAGTGGATCAGGTCATAGCACTGCTTTTTCTGATCGTGTCTCCTATTGTCACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR TCA 72 bp | CAAAGTGAAGAACTCGGACAAAACATTCCAAACCTATaGGCTAAAAGTGGAACAAGGGACACTGTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSEELGQNIPNL*AKSGTRDTVPQ Trigger: CTGAGGAACAGTGTCCCTTGTTCCACTTTTAGCTCATAGGTTTGGAATGTTTTGTCCGAGTTCTTCACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR TCA 72 bp | TGTTGTCTGAGCTCTCATCTACTAGACAATGTACCCTaGCAATACAGGCAGAGAGTAAACTCCAAGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: CCLSSHLLDNVP*QYRQRVNSKNM Trigger: CATGTTCTTGGAGTTTACTCTCTGCCTGTATTGTCAGGGTACATTGTCTAGTAGATGAGAGCTCAGACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTATGTGCATCTGGTATATACAGTGAGACAGCACAGCTTTCATGGGTCACCAAGACACAAAATAAATaGACCATGAGAATCTCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLCASGIYSETAQLSWVTKTQNK*TMRISA Trigger: AGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTT...GGTGACCCATGAAAGCTGTGCTGTCTCACTGTATATACCAGATGCACATAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR CCA 72 bp | TCAGTCACTGAGAACTGTGACAGCCTTACAAGTCGCTaGAAGAGCCGTCACATCTTGAATGTTATAATATAT | + |
|
Preference number: 3 (lower is better) Translates to: SVTENCDSLTSR*KSRHILNVIIY Trigger: ATATATTATAACATTCAAGATGTGACGGCTCTTCCAGCGACTTGTAAGGCTGTCACAGTTCTCAGTGACTGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR TCA 72 bp | ACCAGACACCTTCCTACCTTTTTCTTATCTAAACACTaGTCCCATCTTTATACAATATACCTGACTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: TRHLPTFFLSKH*SHLYTIYLTPL Trigger: CAGTGGAGTCAGGTATATTGTATAAAGATGGGATCAGTGTTTAGATAAGAAAAAGGTAGGAAGGTGTCTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR GCA 72 bp | CTCCAATGGTGCCTAGGTAACATCATTAGGCAAGAATaGCAGTTTAAAAGAACTTTATGCAGAATCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LQWCLGNIIRQE*QFKRTLCRILK Trigger: TTTTAGGATTCTGCATAAAGTTCTTTTAAACTGGCATTCTTGCCTAATGATGTTACCTAGGCACCATTGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202601.4 ENSMUST00000202679.4 |
||
| 3UTR-3UTR CAA 90 bp | CTAACAAACTGTTTAAGATCTAAAGAAGCCAACAAGCAAGGTTCTTTCAAAGTGAAGACACAAAATAAATaGACCATGAGAATCTCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTNCLRSKEANKQGSFKVKTQNK*TMRISA Trigger: AGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTT...CACTTTGAAAGAACCTTGCTTGTTGGCTTCTTTAGATCTTAAACAGTTTGTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR TCA 72 bp | GTAAAACTTATAATTGTCAAGCTTTGGAAGATAGAATaGGATGCGACAGTTGCTAAGGACAGGAAGTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: VKLIIVKLWKIE*DATVAKDRKFM Trigger: CATAAACTTCCTGTCCTTAGCAACTGTCGCATCTCATTCTATCTTCCAAAGCTTGACAATTATAAGTTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR TCA 72 bp | TATCTAAACACTGATCCCATCTTTATACAATATACCTaGCTCCACTGCTCAATTCCCAAATTCATTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: YLNTDPIFIQYT*LHCSIPKFISN Trigger: GTTTGAAATGAATTTGGGAATTGAGCAGTGGAGTCAGGTATATTGTATAAAGATGGGATCAGTGTTTAGATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR CAA 72 bp | AGGATTCTGTTTGTACTGATTCGCTACTACTGCATCTaGGGGGTCATCTGGTTCTGCAGCCGCCAACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RILFVLIRYYCI*GVIWFCSRQQR Trigger: GCGCTGTTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGTACAAACAGAATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
||
| CDS-3UTR GCA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTTCCAGCGTACACGTGTaGCCAAAGTCGAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGAVILHHNVKGRHSSVSSVHV*PKSSCL Trigger: CAGACAGCTCGACTTTGGGCACACGTGTACGCTGGA...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGTCCAGCGTACACGTGTaGCCAAAGTCGAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRLKGAVILHHNVKGRHSSSVHV*PKSSCL Trigger: CAGACAGCTCGACTTTGGGCACACGTGTACGCTGGA...CGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAGTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTGGAGGACAGTGGCCCTCAGTCACTGAGAACTGTGACAGCCTTACAATCCAGCGTACACGTGTaGCCAAAGTCGAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVEDSGPQSLRTVTALQSSVHV*PKSSCL Trigger: CAGACAGCTCGACTTTGGGCACACGTGTACGCTGGA...TTGTAAGGCTGTCACAGTTCTCAGTGACTGAGGGCCACTGTCCTCCACACTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTTGGACTAGAAACTGGTaGTCCAGCGTACACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGAVILHHNVKGRHSSVWTRNW*SSVHVC Trigger: GCACACGTGTACGCTGGAGCACCAGTTTCTAGTCCA...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGTGGACTAGAAACTGGTaGTCCAGCGTACACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLKGAVILHHNVKGRHSWTRNW*SSVHVC Trigger: GCACACGTGTACGCTGGAGCACCAGTTTCTAGTCCA...CGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAGTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CCA 90 bp | GGGTCATCTGGTTCTGCAGCCGCCAACAGCGCTTGCAATGACAATAATACCGTGTTCATACGGTGTGTCTaGAGGTCCTGCTATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSGSAAANSACNDNNTVFIRCV*RSCYFS Trigger: GGAGAAATAGCAGGACCTCCAGACACACCGTATGAA...CACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGCTGCAGAACCAGATGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGAGGAGTAAGTCAAGTGTCTGACAAAGGAAACTGTCAGGCTGAGCACTTCTGGACTAGAAACTaGTGCTCCAGCGTACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGGVSQVSDKGNCQAEHFWTRN*CSSVHV Trigger: CACGTGTACGCTGGAGCACCAGTTTCTAGTCCAGAA...GTGCTCAGCCTGACAGTTTCCTTTGTCAGACACTTGACTTACTCCTCCTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR TCA 90 bp | CGCTACTACTGCATCTTGGGGGTCATCTGGTTCTGCAGCCGCCAACAGCGCTTGAGATCTACTTTAATTTaGTTTTTGCTCGTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RYYCILGVIWFCSRQQRLRSTLI*FLLVSS Trigger: CGAGGAGACGAGCAAAAATCAAATTAAAGTAGATCT...CAAGCGCTGTTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
||
| CDS-3UTR GCA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTGCCGCCAACAGCGCTTaGAATGACAATAATACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGAVILHHNVKGRHSSVAANSA*NDNNTV Trigger: CACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGC...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGACTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGGCTACTACTGCATCTTaGGGGTCATCTGGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLKGAVILHHNVKGRHSATTAS*GSSGSA Trigger: TGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGC...CGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAGTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CCA 90 bp | CACAGGCACAGAGGATCTGTGTTCAGACTTAAGGGAGCTGTGATTCTACACCACTTCTGGACTAGAAACTaGTGCTCCAGCGTACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRHRGSVFRLKGAVILHHFWTRN*CSSVHV Trigger: CACGTGTACGCTGGAGCACCAGTTTCTAGTCCAGAA...GTGGTGTAGAATCACAGCTCCCTTAAGTCTGAACACAGATCCTCTGTGCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR CAA 72 bp | CACGATCAGAAAAAGCAGTGCTATGACCTGATCCACTaGCCTCAGAACCAAACAGACCTGGCCACACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HDQKKQCYDLIH*PQNQTDLATPH Trigger: ATGAGGTGTGGCCAGGTCTGTTTGGTTCTGAGGCAAGTGGATCAGGTCATAGCACTGCTTTTTCTGATCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | CACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTGACAGGTCCAGCGTACACGTGTaGCCAAAGTCGAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKTQNKLTMRISALDGDRSSVHV*PKSSCL Trigger: CAGACAGCTCGACTTTGGGCACACGTGTACGCTGGA...CCTGTCACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | TTCCTATGTGCATCTGGTATATACAGTGAGACAGCACAGCTTTCATGGGTCACCTGGACTAGAAACTGGTaGTCCAGCGTACACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLCASGIYSETAQLSWVTWTRNW*SSVHVC Trigger: GCACACGTGTACGCTGGAGCACCAGTTTCTAGTCCA...GGTGACCCATGAAAGCTGTGCTGTCTCACTGTATATACCAGATGCACATAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | ACATTCCAAACCTATGAGCTAAAAGTGGAACAAGGGACACTGTTCCTCAGCACGTGGACTAGAAACTGGTaGTCCAGCGTACACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFQTYELKVEQGTLFLSTWTRNW*SSVHVC Trigger: GCACACGTGTACGCTGGAGCACCAGTTTCTAGTCCA...CGTGCTGAGGAACAGTGTCCCTTGTTCCACTTTTAGCTCATAGGTTTGGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CCA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTTTCATACGGTGTGTCTaGAGGTCCTGCTATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKGAVILHHNVKGRHSSVFIRCV*RSCYFS Trigger: GGAGAAATAGCAGGACCTCCAGACACACCGTATGAA...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 |
||
| CDS-3UTR GCA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTCAGAGTCATTGCTGCTaGCCATTGATCTTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKGAVILHHNVKGRHSSVQSHCC*PLIFQD Trigger: ATCCTGAAAGATCAATGGGCAGCAGCAATGACTCTG...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATCCAGCGTACACGTGTaGCCAAAGTCGAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLKQTLESVTLLNTKVASSVHV*PKSSCL Trigger: CAGACAGCTCGACTTTGGGCACACGTGTACGCTGGA...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | CACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTGACAGGTGGACTAGAAACTGGTaGTCCAGCGTACACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKTQNKLTMRISALDGDRWTRNW*SSVHVC Trigger: GCACACGTGTACGCTGGAGCACCAGTTTCTAGTCCA...CCTGTCACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CCA 90 bp | CCAAATTCATTTCAAACCCTTACCCCACCAAAACGTCATTTCCGGTGCTGCTACTTCTGGACTAGAAACTaGTGCTCCAGCGTACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PNSFQTLTPPKRHFRCCYFWTRN*CSSVHV Trigger: CACGTGTACGCTGGAGCACCAGTTTCTAGTCCAGAA...GTAGCAGCACCGGAAATGACGTTTTGGTGGGGTAAGGGTTTGAAATGAATTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGGGTGGTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGCCGCCAACAGCGCTTaGAATGACAATAATACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRVVFSATRSKKSSTSMQAANSA*NDNNTV Trigger: CACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGC...TTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGACCACCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | CACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTGACAGGGCCGCCAACAGCGCTTaGAATGACAATAATACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKTQNKLTMRISALDGDRAANSA*NDNNTV Trigger: CACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGC...CCTGTCACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | CACAGGCACAGAGGATCTGTGTTCAGACTTAAGGGAGCTGTGATTCTACACCACCAAAGTCGAGCTGTCTaGTTGAACATTTCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HRHRGSVFRLKGAVILHHQSRAV*LNISGF Trigger: GAATCCTGAAATGTTCAAGCAGACAGCTCGACTTTG...GTGGTGTAGAATCACAGCTCCCTTAAGTCTGAACACAGATCCTCTGTGCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | AAGGAAACTGTCAGGCTGAGCACTAGGGAACAGGTACTGCACCCTTCAAGTTTCCAAAGTCGAGCTGTCTaGTTGAACATTTCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KETVRLSTREQVLHPSSFQSRAV*LNISGF Trigger: GAATCCTGAAATGTTCAAGCAGACAGCTCGACTTTG...GAAACTTGAAGGGTGCAGTACCTGTTCCCTAGTGCTCAGCCTGACAGTTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGTAAATTCATCCAGCGTACACGTGTaGCCAAAGTCGAGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFSATRSKKSSTSMQVNSSSVHV*PKSSCL Trigger: CAGACAGCTCGACTTTGGGCACACGTGTACGCTGGA...TGAATTTACTTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATGGACTAGAAACTGGTaGTCCAGCGTACACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLKQTLESVTLLNTKVAWTRNW*SSVHVC Trigger: GCACACGTGTACGCTGGAGCACCAGTTTCTAGTCCA...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGCAAGGCCACTATTACTaGGTTCCTATCAAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRLKGAVILHHNVKGRHSQGHYY*VPIKTH Trigger: ATGGGTTTTGATAGGAACGCAGTAATAGTGGCCTTG...CGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAGTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | CACAGGCACAGAGGATCTGTGTTCAGACTTAAGGGAGCTGTGATTCTACACCACCAAGGCCACTATTACTaGGTTCCTATCAAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRHRGSVFRLKGAVILHHQGHYY*VPIKTH Trigger: ATGGGTTTTGATAGGAACGCAGTAATAGTGGCCTTG...GTGGTGTAGAATCACAGCTCCCTTAAGTCTGAACACAGATCCTCTGTGCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR CAA 72 bp | GTTCCTCAGCACGTTTCCCACAAGACACAAAATAAATaGACCATGAGAATCTCCGCTCTGGATGGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPQHVSHKTQNK*TMRISALDGDR Trigger: CCTGTCACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAACGTGCTGAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGGAGGAGTAAGTCAAGTGTCTGACAAAGGAAACTGTCAGGCTGAGCACAGATCTACTTTAATTTaGTTTTTGCTCGTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GAGGVSQVSDKGNCQAEHRSTLI*FLLVSS Trigger: CGAGGAGACGAGCAAAAATCAAATTAAAGTAGATCT...GTGCTCAGCCTGACAGTTTCCTTTGTCAGACACTTGACTTACTCCTCCTGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCACGTGCGCAGAGTCATTaGTGCTGCCCATTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLKQTLESVTLLNTKVARAQSH*CCPLIF Trigger: AAAGATCAATGGGCAGCAGCAATGACTCTGCGCACG...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCAGCCGCCAACAGCGCTTaGAATGACAATAATACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLKQTLESVTLLNTKVAAANSA*NDNNTV Trigger: CACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGC...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CCA 90 bp | CACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTGACAGGTTCATACGGTGTGTCTaGAGGTCCTGCTATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKTQNKLTMRISALDGDRFIRCV*RSCYFS Trigger: GGAGAAATAGCAGGACCTCCAGACACACCGTATGAA...CCTGTCACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGGTGGTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAATTCATACGGTGTGTCTaGAGGTCCTGCTATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRVVFSATRSKKSSTSMQFIRCV*RSCYFS Trigger: GGAGAAATAGCAGGACCTCCAGACACACCGTATGAA...TTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGACCACCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 |
||
| CDS-3UTR CCA 90 bp | CACGTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATTTCTGGACTAGAAACTaGTGCTCCAGCGTACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: HVSHKTQNKLTMRISALDFWTRN*CSSVHV Trigger: CACGTGTACGCTGGAGCACCAGTTTCTAGTCCAGAA...ATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CCA 90 bp | GTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTTTCTGGACTAGAAACTaGTGCTCCAGCGTACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSHKTQNKLTMRISALDGFWTRN*CSSVHV Trigger: CACGTGTACGCTGGAGCACCAGTTTCTAGTCCAGAA...ACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR CAA 72 bp | GTTTGTCACAACATGTGTAGACACTGGAAGTCTTGCTaGAGAAAAGGCTATCCCTTAGTGACACCAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VCHNMCRHWKSC*RKGYPLVTPTG Trigger: GCCTGTTGGTGTCACTAAGGGATAGCCTTTTCTCAAGCAAGACTTCCAGTGTCTACACATGTTGTGACAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR TCA 90 bp | CCAAATTCATTTCAAACCCTTACCCCACCAAAACGTCATTTCCGGTGCTGCTACATTGCTGCTGCCCATTaGTCTTTCAGGATATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PNSFQTLTPPKRHFRCCYIAAAH*SFRISK Trigger: TTTGGATATCCTGAAAGATCAATGGGCAGCAGCAAT...GTAGCAGCACCGGAAATGACGTTTTGGTGGGGTAAGGGTTTGAAATGAATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142407.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGTAAATTCACGTGCGCAGAGTCATTaGTGCTGCCCATTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSATRSKKSSTSMQVNSRAQSH*CCPLIF Trigger: AAAGATCAATGGGCAGCAGCAATGACTCTGCGCACG...TGAATTTACTTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGTAAATTCAGCCGCCAACAGCGCTTaGAATGACAATAATACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFSATRSKKSSTSMQVNSAANSA*NDNNTV Trigger: CACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGC...TGAATTTACTTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | GTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTCAGAGTCATTGCTGCTaGCCATTGATCTTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSHKTQNKLTMRISALDGQSHCC*PLIFQD Trigger: ATCCTGAAAGATCAATGGGCAGCAGCAATGACTCTG...ACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR GCA 90 bp | GTTATCCTAGTTAGTCAACAGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTCAGAGTCATTGCTGCTaGCCATTGATCTTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VILVSQQNPEANSRVCYTQSHCC*PLIFQD Trigger: ATCCTGAAAGATCAATGGGCAGCAGCAATGACTCTG...AGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCTGTTGACTAACTAGGATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR CCA 90 bp | CTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATGTTTTCCCATGGTTTTATTCTGGACTAGAAACTaGTGCTCCAGCGTACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LESVTLLNTKVACFPMVLFWTRN*CSSVHV Trigger: CACGTGTACGCTGGAGCACCAGTTTCTAGTCCAGAA...TAAAACCATGGGAAAACATGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| 3UTR CAA 72 bp | GAAGCAGTTCTGTTGCAGTCTCTACATCCCATGATTTaGAAGACAAGGCCACTATTACTGCGTTCCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EAVLLQSLHPMI*KTRPLLLRSYQ Trigger: TTGATAGGAACGCAGTAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAGAGACTGCAACAGAACTGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
||
| CDS-3UTR TCA 90 bp | ACATTCCAAACCTATGAGCTAAAAGTGGAACAAGGGACACTGTTCCTCAGCACGAGATCTACTTTAATTTaGTTTTTGCTCGTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TFQTYELKVEQGTLFLSTRSTLI*FLLVSS Trigger: CGAGGAGACGAGCAAAAATCAAATTAAAGTAGATCT...CGTGCTGAGGAACAGTGTCCCTTGTTCCACTTTTAGCTCATAGGTTTGGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 |
||
| CDS-3UTR TCA 90 bp | GTTATCCTAGTTAGTCAACAGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTATTGCTGCTGCCCATTaGTCTTTCAGGATATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VILVSQQNPEANSRVCYTIAAAH*SFRISK Trigger: TTTGGATATCCTGAAAGATCAATGGGCAGCAGCAAT...AGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCTGTTGACTAACTAGGATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR GCA 90 bp | GTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTCAAAGTCGAGCTGTCTaGTTGAACATTTCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSHKTQNKLTMRISALDGQSRAV*LNISGF Trigger: GAATCCTGAAATGTTCAAGCAGACAGCTCGACTTTG...ACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCACAAGGCCACTATTACTaGGTTCCTATCAAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLKQTLESVTLLNTKVAQGHYY*VPIKTH Trigger: ATGGGTTTTGATAGGAACGCAGTAATAGTGGCCTTG...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGTAAATTCACAAAGTCGAGCTGTCTaGTTGAACATTTCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSATRSKKSSTSMQVNSQSRAV*LNISGF Trigger: GAATCCTGAAATGTTCAAGCAGACAGCTCGACTTTG...TGAATTTACTTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CAA 90 bp | CAGCCGCCAACAGCGCTTGCAATGACAATAATACCGTGCGCAGAGTCATTGCTGTCCTTGAACTCCCGCTaGATTCGCTGCACCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: QPPTALAMTIIPCAESLLSLNSR*IRCTAM Trigger: CATCGCGGTGCAGCGAATCAAGCGGGAGTTCAAGGA...CAGCAATGACTCTGCGCACGGTATTATTGTCATTGCAAGCGCTGTTGGCGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202601.4 |
||
| CDS-3UTR CAA 90 bp | ACATTCCAAACCTATGAGCTAAAAGTGGAACAAGGGACACTGTTCCTCAGCACGTCCTTGAACTCCCGCTaGATTCGCTGCACCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TFQTYELKVEQGTLFLSTSLNSR*IRCTAM Trigger: CATCGCGGTGCAGCGAATCAAGCGGGAGTTCAAGGA...CGTGCTGAGGAACAGTGTCCCTTGTTCCACTTTTAGCTCATAGGTTTGGAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR CAA 90 bp | GTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTTCCTTGAACTCCCGCTaGATTCGCTGCACCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSHKTQNKLTMRISALDGSLNSR*IRCTAM Trigger: CATCGCGGTGCAGCGAATCAAGCGGGAGTTCAAGGA...ACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR CAA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATCCTTGAACTCCCGCTaGATTCGCTGCACCGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTLKQTLESVTLLNTKVASLNSR*IRCTAM Trigger: CATCGCGGTGCAGCGAATCAAGCGGGAGTTCAAGGA...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS TCA 90 bp | TCTACATCCCATGATTTTGAAGACAAGGCCACTATTACTGCGTTCTaGTTCGCTACTACTGCATCTTGGGGGTCATCTGGTTCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: STSHDFEDKATITAF*FATTASWGSSGSAA Trigger: GGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGAACGCAGTAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201383.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAACTGTCAGGCTGAGCACTAGGGAACAGGTACTGCACCCTTCAAGTTTCCATTGCTGCTGCCCATaGATCTTTCAGGATATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KETVRLSTREQVLHPSSFHCCCP*IFQDIQ Trigger: TTGGATATCCTGAAAGATCAATGGGCAGCAGCAATG...GAAACTTGAAGGGTGCAGTACCTGTTCCCTAGTGCTCAGCCTGACAGTTTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGCACAGAGGATCTGTGTTCAGACTTAAGGGAGCTGTGATTCTACACCACAGTCGAGCTGTCTGCTaGAACATTTCAGGATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRHRGSVFRLKGAVILHHSRAVC*NISGFC Trigger: ACAGAATCCTGAAATGTTCAAGCAGACAGCTCGACT...GTGGTGTAGAATCACAGCTCCCTTAAGTCTGAACACAGATCCTCTGTGCCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CAA 90 bp | CTTAAGGGAGCTGTGATTCTACACCACAATGTGAAGGGCCGACACTCGAGTGTTAGTCGAGCTGTCTGCTaGAACATTTCAGGATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LKGAVILHHNVKGRHSSVSRAVC*NISGFC Trigger: ACAGAATCCTGAAATGTTCAAGCAGACAGCTCGACT...AACACTCGAGTGTCGGCCCTTCACATTGTGGTGTAGAATCACAGCTCCCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CAA 90 bp | GTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGTAAATTCACTCTTCAGCACCTCCTaGAACTCCCGCTTGATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VFSATRSKKSSTSMQVNSLFSTS*NSRLIR Trigger: GCGAATCAAGCGGGAGTTCAAGGAGGTGCTGAAGAG...TGAATTTACTTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS GCA 90 bp | AGGATATCCAAACAAATAGCCCCTGTGACGGAACTAATATTAGGGTaGCATATTTTAGTGATAAACCGGACCTCCTCGCTCTTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RISKQIAPVTELILG*HILVINRTSSLFST Trigger: GGTGCTGAAGAGCGAGGAGGTCCGGTTTATCACTAAAATATGGCACCCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201984.4 |
||
| CDS-3UTR CAA 90 bp | TTCCTATGTGCATCTGGTATATACAGTGAGACAGCACAGCTTTCATGGGTCACCCATTGCTGCTGCCCATaGATCTTTCAGGATATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLCASGIYSETAQLSWVTHCCCP*IFQDIQ Trigger: TTGGATATCCTGAAAGATCAATGGGCAGCAGCAATG...GGTGACCCATGAAAGCTGTGCTGTCTCACTGTATATACCAGATGCACATAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGCACAGAGGATCTGTGTTCAGACTTAAGGGAGCTGTGATTCTACACCACCTACATCCCATGATTTaGAAGACAAGGCCACTATTA | + |
|
Preference number: 5 (lower is better) Translates to: HRHRGSVFRLKGAVILHHLHPMI*KTRPLL Trigger: TAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAG...GTGGTGTAGAATCACAGCTCCCTTAAGTCTGAACACAGATCCTCTGTGCCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CAA 90 bp | AGAACCCTGAAGCAAACTCTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCACATTGCTGCTGCCCATaGATCTTTCAGGATATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RTLKQTLESVTLLNTKVAHCCCP*IFQDIQ Trigger: TTGGATATCCTGAAAGATCAATGGGCAGCAGCAATG...TGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAGAGTTTGCTTCAGGGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142407.8 ENSMUST00000201383.2 ENSMUST00000201984.4 |
||
| CDS-3UTR CAA 90 bp | GTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTAGTCGAGCTGTCTGCTaGAACATTTCAGGATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSHKTQNKLTMRISALDGSRAVC*NISGFC Trigger: ACAGAATCCTGAAATGTTCAAGCAGACAGCTCGACT...ACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
||
| CDS-3UTR CAA 90 bp | GTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGTAAATTCAAGTCGAGCTGTCTGCTaGAACATTTCAGGATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFSATRSKKSSTSMQVNSSRAVC*NISGFC Trigger: ACAGAATCCTGAAATGTTCAAGCAGACAGCTCGACT...TGAATTTACTTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| CDS-3UTR CAA 90 bp | CTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATGTTTTCCCATGGTTTTAAGTCGAGCTGTCTGCTaGAACATTTCAGGATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LESVTLLNTKVACFPMVLSRAVC*NISGFC Trigger: ACAGAATCCTGAAATGTTCAAGCAGACAGCTCGACT...TAAAACCATGGGAAAACATGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| CDS-3UTR CAA 90 bp | CACGTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATCTACATCCCATGATTTaGAAGACAAGGCCACTATTA | + |
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Preference number: 5 (lower is better) Translates to: HVSHKTQNKLTMRISALDLHPMI*KTRPLL Trigger: TAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAG...ATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAACGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| CDS-3UTR CAA 90 bp | GTTTCCCACAAGACACAAAATAAATTGACCATGAGAATCTCCGCTCTGGATGGTCTACATCCCATGATTTaGAAGACAAGGCCACTATTA | + |
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Preference number: 5 (lower is better) Translates to: VSHKTQNKLTMRISALDGLHPMI*KTRPLL Trigger: TAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAG...ACCATCCAGAGCGGAGATTCTCATGGTCAATTTATTTTGTGTCTTGTGGGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| CDS-3UTR CAA 90 bp | GTCTTTTCGGCTACCCGTTCTAAGAAGTCAAGTACAAGCATGCAAGTAAATTCACTACATCCCATGATTTaGAAGACAAGGCCACTATTA | + |
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Preference number: 5 (lower is better) Translates to: VFSATRSKKSSTSMQVNSLHPMI*KTRPLL Trigger: TAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAG...TGAATTTACTTGCATGCTTGTACTTGACTTCTTAGAACGGGTAGCCGAAAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| CDS-3UTR CAA 90 bp | CTCGAGTCTGTTACACTGCTAAACACTAAAGTAGCATGTTTTCCCATGGTTTTACTACATCCCATGATTTaGAAGACAAGGCCACTATTA | + |
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Preference number: 5 (lower is better) Translates to: LESVTLLNTKVACFPMVLLHPMI*KTRPLL Trigger: TAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAG...TAAAACCATGGGAAAACATGCTACTTTAGTGTTTAGCAGTGTAACAGACTCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| CDS-3UTR CAA 90 bp | ATTACTACTTACAAAGTGAAGAACTCGGACAAAACATTCCAAACCTATGAGCTACTACATCCCATGATTTaGAAGACAAGGCCACTATTA | + |
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Preference number: 5 (lower is better) Translates to: ITTYKVKNSDKTFQTYELLHPMI*KTRPLL Trigger: TAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAG...TAGCTCATAGGTTTGGAATGTTTTGTCCGAGTTCTTCACTTTGTAAGTAGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000142407.8 ENSMUST00000201266.4 ENSMUST00000201292.4 ENSMUST00000201383.2 ENSMUST00000201984.4 ENSMUST00000202082.4 ENSMUST00000202679.4 |
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| CDS CAA 72 bp | GTGATAAACCGGACCTCCTCGCTCTTCAGCACCTCCTaGAACTCCCGCTTGATTCGCTGCACCGCGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: VINRTSSLFSTS*NSRLIRCTAML Trigger: CAACATCGCGGTGCAGCGAATCAAGCGGGAGTTCAAGGAGGTGCTGAAGAGCGAGGAGGTCCGGTTTATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201984.4 |
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| CDS CAA 72 bp | CACTATTACTGCGTTCTGATTCGCTACTACTGCATCTaGGGGGTCATCTGGTTCTGCAGCCGCCAACAGCGC | + |
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Preference number: 6 (lower is better) Translates to: HYYCVLIRYYCI*GVIWFCSRQQR Trigger: GCGCTGTTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGAACGCAGTAATAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201383.2 |
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| CDS GCA 72 bp | CAAGGCCACTATTACTGCGTTCTGATTCGCTACTACTaGATCTTGGGGGTCATCTGGTTCTGCAGCCGCCAA | + |
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Preference number: 6 (lower is better) Translates to: QGHYYCVLIRYY*ILGVIWFCSRQ Trigger: TTGGCGGCTGCAGAACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGAACGCAGTAATAGTGGCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201383.2 |
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| CDS TCA 72 bp | CATGATTTTGAAGACAAGGCCACTATTACTGCGTTCTaGTTCGCTACTACTGCATCTTGGGGGTCATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HDFEDKATITAF*FATTASWGSSG Trigger: ACCAGATGACCCCCAAGATGCAGTAGTAGCGAATCAGAACGCAGTAATAGTGGCCTTGTCTTCAAAATCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201383.2 |
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| CDS CAA 72 bp | GAAGCAGTTCTGTTGCAGTCTCTACATCCCATGATTTaGAAGACAAGGCCACTATTACTGCGTTCTGATTCG | + |
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Preference number: 6 (lower is better) Translates to: EAVLLQSLHPMI*KTRPLLLRSDS Trigger: CGAATCAGAACGCAGTAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAGAGACTGCAACAGAACTGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201383.2 |
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| CDS CAA 90 bp | AGTTACTCAGAAGCAGTTCTGTTGCAGTCTCTACATCCCATGATTTaGAAGACAAGGCCACTATTACTGCGTTCTGATTCGCTACTACTG | + |
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Preference number: 6 (lower is better) Translates to: SYSEAVLLQSLHPMI*KTRPLLLRSDSLLL Trigger: CAGTAGTAGCGAATCAGAACGCAGTAATAGTGGCCTTGTCTTCAAAATCATGGGATGTAGAGACTGCAACAGAACTGCTTCTGAGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201383.2 |
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