Pregenerated sensors for UBE2J2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023286Ensembl transcript IDs: ENSMUST00000024056.10, ENSMUST00000103175.8, ENSMUST00000105581.5, ENSMUST00000105582.8, ENSMUST00000105583.9, ENSMUST00000118192.8, ENSMUST00000136492.2, ENSMUST00000152536.8, ENSMUST00000166489.8
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTAACCTGCCAAGCCGGCACAGCACTCTTCAGTCGTACACTAAGTaGGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTTCTACC | + |
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Preference number: 1 (lower is better) Translates to: ANLPSRHSTLQSYTK*DTLWPESRLLFTST Trigger: GGTAGAAGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTGAAGAGTGCTGTGCCGGCTTGGCAGGTTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 90 bp | CTCAAGGGAGCTGAAAGCAGAGGTACTAAGGTTGACAGCAGTACCTaGGCTACCCACAGTCCTTCACCACAGTCCTCAGCCACGGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: LKGAESRGTKVDSST*ATHSPSPQSSATVL Trigger: TAGAACCGTGGCTGAGGACTGTGGTGAAGGACTGTGGGTAGCCCAGGTACTGCTGTCAACCTTAGTACCTCTGCTTTCAGCTCCCTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 90 bp | AAGAACTTGGAGTGCACTGTCTGCCAACATAGGAGGGCCGGCTTCTaGCCAACTGGACATAAGGAACCAGGGTTACCAAGGCTCCTACTT | + |
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Preference number: 1 (lower is better) Translates to: KNLECTVCQHRRAGF*PTGHKEPGLPRLLL Trigger: AAGTAGGAGCCTTGGTAACCCTGGTTCCTTATGTCCAGTTGGCCAGAAGCCGGCCCTCCTATGTTGGCAGACAGTGCACTCCAAGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR TCA 90 bp | CTTACTGGTGGCCTGGTGACGTGTTCTGGGCAGTTTCCCTCTCCATaGTCTGTAGAGAGCGACATCTTACATAGGTCACCCGGAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LTGGLVTCSGQFPSP*SVESDILHRSPGKD Trigger: ATCCTTTCCGGGTGACCTATGTAAGATGTCGCTCTCTACAGATCATGGAGAGGGAAACTGCCCAGAACACGTCACCAGGCCACCAGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 90 bp | TTTGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTaGTCACAGCCTACCAGGGAAGGGACATTAACACAGACATCGTGG | + |
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Preference number: 1 (lower is better) Translates to: FGSCNIPFSQARHCT*SQPTREGTLTQTSW Trigger: CCACGATGTCTGTGTTAATGTCCCTTCCCTGGTAGGCTGTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 90 bp | TGCACAGGTTGCACAGGCCCAACCAAGGGTTGTCAATCTACCTTTTaGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTG | + |
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Preference number: 1 (lower is better) Translates to: CTGCTGPTKGCQSTF*QLQHSLLTSQALHL Trigger: CAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAGGTAGATTGACAACCCTTGGTTGGGCCTGTGCAACCTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 90 bp | GCTTTCAGTTGGGCAATGGAGGCCCACACCTTGAATCCTAGCTCTTaGGAGGCAAAGGCACGTGGATCTGAGATGAAGGACAGCTTGATT | + |
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Preference number: 1 (lower is better) Translates to: AFSWAMEAHTLNPSS*EAKARGSEMKDSLI Trigger: AATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTTGCCTCCCAAGAGCTAGGATTCAAGGTGTGGGCCTCCATTGCCCAACTGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 90 bp | AGCCGGCACAGCACTCTTCAGTCGTACACTAAGTGCGACACCTTGTaGCCAGAGAGCAGGCTGCTTTTTACTTCTACCCTAAGAACAAGC | + |
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Preference number: 1 (lower is better) Translates to: SRHSTLQSYTKCDTL*PESRLLFTSTLRTS Trigger: GCTTGTTCTTAGGGTAGAAGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTGAAGAGTGCTGTGCCGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 90 bp | ATACTAGTTGTAAACCACAGAGCTGAATTACAGGTAATCATCACATaGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGGAGGTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: ILVVNHRAELQVIIT*EHFSFTMAPERRWA Trigger: AGCCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGATTACCTGTAATTCAGCTCTGTGGTTTACAACTAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR GCA 90 bp | TCTTTCAAGAACTTCAGGAAACACCAATTTGGAATTGAGGTAATTTaGAACGGAGCACTCTGGGACCAGGGAAAAATTACCATCTACCAA | + |
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Preference number: 1 (lower is better) Translates to: SFKNFRKHQFGIEVI*NGALWDQGKITIYQ Trigger: TTGGTAGATGGTAATTTTTCCCTGGTCCCAGAGTGCTCCGTTGCAAATTACCTCAATTCCAAATTGGTGTTTCCTGAAGTTCTTGAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCACATGTCTGTAGGGCTCCACCCACCGAAGGCTGCACAGGTTGCACAGGCCACTTCAGCTTTACCATaGCCCCTGAAAGGAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: KHMSVGLHPPKAAQVAQATSALP*PLKGGG Trigger: CCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGT...GGCCTGTGCAACCTGTGCAGCCTTCGGTGGGTGGAGCCCTACAGACATGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CAA 90 bp | AGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGTCTaGAAATCCCTAAACTCCCATAAAGGCCATGCTGGGGCCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RVSSRTAGDTQRNPV*KSLNSHKGHAGARG Trigger: CCCCCTGGCCCCAGCATGGCCTTTATGGGAGTTTAGGGATTTCAAGACAGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACGCCGGCATCAAGCTCTaGCCCTGTGTCCCTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SEMKDSLIYRVSSRTAGDAGIKL*PCVPRQ Trigger: CTGCCGAGGGACACAGGGCCAGAGCTTGATGCCGGC...GTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGGCCGGCATCAAGCTCTaGCCCTGTGTCCCTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KQGQKTTQEISSKTRARVAGIKL*PCVPRQ Trigger: CTGCCGAGGGACACAGGGCCAGAGCTTGATGCCGGC...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCGTACACTAAGTGCGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTAAACCAGAGCGCGAGTaGCTCCGTCCAGTCAACCTC | + |
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Preference number: 2 (lower is better) Translates to: QSYTKCDTLWPESRLLFTKPERE*LRPVNL Trigger: GAGGTTGACTGGACGGAGCCACTCGCGCTCTGGTTT...AGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCACATGGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGGAGGTGGGCTTATCCATAAGGGAGCTTaGCAGCTTACTGGTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSHGSTSALPWPLKGGGLIHKGA*QLTGGL Trigger: CAGGCCACCAGTAAGCTGGCAAGCTCCCTTATGGAT...AAGCCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CAA 90 bp | CTGCACAGGTTGCACAGGCCCAACCAAGGGTTGTCAATCTACCTTTaGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LHRLHRPNQGLSIYL*AAATFPSHKPGIAL Trigger: AAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAGGTAGATTGACAACCCTTGGTTGGGCCTGTGCAACCTGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CAA 90 bp | CCAAGCCGGCACAGCACTCTTCAGTCGTACACTAAGTGCGACACCTaGTGGCCAGAGAGCAGGCTGCTTTTTACTTCTACCCTAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: PSRHSTLQSYTKCDT*WPESRLLFTSTLRT Trigger: TGTTCTTAGGGTAGAAGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTGAAGAGTGCTGTGCCGGCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTGGTCACAGCCTACCAGCAGTTTCCCTCTCCATaGTCTGTAGAGAGCGACATC | + |
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Preference number: 2 (lower is better) Translates to: LQHSLLTSQALHLVTAYQQFPSP*SVESDI Trigger: GATGTCGCTCTCTACAGATCATGGAGAGGGAAACTG...CTGGTAGGCTGTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CAA 90 bp | TTTTGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTaGGTCACAGCCTACCAGGGAAGGGACATTAACACAGACATCGTG | + |
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Preference number: 2 (lower is better) Translates to: FWQLQHSLLTSQALH*VTAYQGRDINTDIV Trigger: CACGATGTCTGTGTTAATGTCCCTTCCCTGGTAGGCTGTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTGGTCACCAGTTTCCCTCTCCATaGTCTGTAGAGAGCGACATC | + |
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Preference number: 2 (lower is better) Translates to: LLAAATFPSHKPGIALGHQFPSP*SVESDI Trigger: GATGTCGCTCTCTACAGATCATGGAGAGGGAAACTG...GTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCACATGGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGGAGGTGGGCTTGGTCAGAGAGCAAGCTaGTGCTTCTACCTTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: SSHGSTSALPWPLKGGGLGQRAS*CFYLNR Trigger: TCTGTTAAGGTAGAAGCAGCAGCTTGCTCTCTGACC...AAGCCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CAA 90 bp | AGCTCTTGGGAGGCAAAGGCACGTGGATCTGAGATGAAGGACAGCTaGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSWEAKARGSEMKDS*IYRVSSRTAGDTQR Trigger: TCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTTGCCTCCCAAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCACATGGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGGAGGTGGGCTTGCCTACCGTAAGATATaGAAGAACTTGGAGTGCACT | + |
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Preference number: 2 (lower is better) Translates to: SSHGSTSALPWPLKGGGLAYRKI*KNLECT Trigger: AGTGCACTCCAAGTTCTTTCATATCTTACGGTAGGC...AAGCCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCGTACACTAAGTGCGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTAAAGGCACGTGGATCTaGGATGAAGGACAGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: QSYTKCDTLWPESRLLFTKGTWI*DEGQLD Trigger: ATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTT...AGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCGCCGGCATCAAGCTCTaGCCCTGTGTCCCTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NRFTKQGQKTTQEISSKTAGIKL*PCVPRQ Trigger: CTGCCGAGGGACACAGGGCCAGAGCTTGATGCCGGC...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCCGGCATCAAGCTCTaGCCCTGTGTCCCTCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RFTKQGQKTTQEISSKTRAGIKL*PCVPRQ Trigger: CTGCCGAGGGACACAGGGCCAGAGCTTGATGCCGGC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACAGGAGGGCCGGCTTCTaGCCAACTGGACATAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SEMKDSLIYRVSSRTAGDRRAGF*PTGHKE Trigger: TTCCTTATGTCCAGTTGGCCAGAAGCCGGCCCTCCT...GTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTGGTCACGCCTACCGTAAGATATaGAAGAACTTGGAGTGCACT | + |
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Preference number: 2 (lower is better) Translates to: LLAAATFPSHKPGIALGHAYRKI*KNLECT Trigger: AGTGCACTCCAAGTTCTTTCATATCTTACGGTAGGC...GTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGTTGACAGCAGTACCTaGGCTACCCACAGTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLIYRVSSRTAGDTQRNPVDSST*ATHSPS Trigger: TGAAGGACTGTGGGTAGCCCAGGTACTGCTGTCAAC...AGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGCACGTGGATCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTAAGTGCAGCACTTTGTaGTCAGAGAGCAAGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AKARGSEMKDSLIYRVSSKCSTL*SESKLL Trigger: CAGCAGCTTGCTCTCTGACCACAAAGTGCTGCACTT...AGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGACGTGTTCTGGGCAGTTTCCCTCTCCATGATCTGTAGAGAGCGACATCTTGAAGCAATTTTACAATaGGATCAAATCAGTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GDVFWAVSLSMICRERHLEAILQ*DQISPL Trigger: GAGAGGACTGATTTGATCTCATTGTAAAATTGCTTC...AAGATGTCGCTCTCTACAGATCATGGAGAGGGAAACTGCCCAGAACACGTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTCAGAGAGCAAGCTGCTaGTTCTACCTTAACAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLIYRVSSRTAGDTQRNPQRASC*FYLNRK Trigger: CTTTCTGTTAAGGTAGAAGCAGCAGCTTGCTCTCTG...AGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGGCACGTGGATCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTGGTCAGAGAGCAAGCTaGTGCTTCTACCTTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: AKARGSEMKDSLIYRVSSGQRAS*CFYLNR Trigger: TCTGTTAAGGTAGAAGCAGCAGCTTGCTCTCTGACC...AGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CCA 90 bp | TTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGTCTTAACACAGACATCGTaGAGTTCAGAGCAAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LIYRVSSRTAGDTQRNPVLTQTS*SSEQRG Trigger: ACCCCTTTGCTCTGAACTCCACGATGTCTGTGTTAA...GACAGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CAA 90 bp | CCTCAAGAGGGAGTTGAGAACCACCAGTCTCCTCCAGATCACATTTaGGTTTTTGCTTTCTCTTTAAGGTTTGTAAAAAGTGAAGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: PQEGVENHQSPPDHI*VFAFSLRFVKSEAR Trigger: CCGGGCTTCACTTTTTACAAACCTTAAAGAGAAAGCAAAAACCAAAATGTGATCTGGAGGAGACTGGTGGTTCTCAACTCCCTCTTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| 3UTR CAA 90 bp | GAGCAAGCTGCTGCTTCTACCTTAACAGAAAGCAGAACCGGCACTTaGTGTGAGTCTTCTCTCACTCAGAAGCAATTTTACAATGAGATC | + |
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Preference number: 2 (lower is better) Translates to: EQAAASTLTESRTGT*CESSLTQKQFYNEI Trigger: GATCTCATTGTAAAATTGCTTCTGAGTGAGAGAAGACTCACACAAAGTGCCGGTTCTGCTTTCTGTTAAGGTAGAAGCAGCAGCTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCACATGTCTGTAGGGCTCCACCCACCGAAGGCTGCACAGGTTGCACAGGCCTCTAAGTGCAGCACTTaGTGGTCAGAGAGCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KHMSVGLHPPKAAQVAQASKCST*WSESKL Trigger: CAGCTTGCTCTCTGACCACAAAGTGCTGCACTTAGA...GGCCTGTGCAACCTGTGCAGCCTTCGGTGGGTGGAGCCCTACAGACATGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR GCA 72 bp | GTCTGTAGGGCTCCACCCACCGAAGGCTGCACAGGTTaGACAGGCCCAACCAAGGGTTGTCAATCTACCTTT | + |
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Preference number: 3 (lower is better) Translates to: VCRAPPTEGCTG*TGPTKGCQSTF Trigger: AAAGGTAGATTGACAACCCTTGGTTGGGCCTGTGCAACCTGTGCAGCCTTCGGTGGGTGGAGCCCTACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 72 bp | GAGTGCACTGTCTGCCAACATAGGAGGGCCGGCTTCTaGCCAACTGGACATAAGGAACCAGGGTTACCAAGG | + |
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Preference number: 3 (lower is better) Translates to: ECTVCQHRRAGF*PTGHKEPGLPR Trigger: CCTTGGTAACCCTGGTTCCTTATGTCCAGTTGGCCAGAAGCCGGCCCTCCTATGTTGGCAGACAGTGCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR GCA 72 bp | CCAAGCCGGCACAGCACTCTTCAGTCGTACACTAAGTaGGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: PSRHSTLQSYTK*DTLWPESRLLF Trigger: AAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTGAAGAGTGCTGTGCCGGCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 72 bp | GCTGAAAGCAGAGGTACTAAGGTTGACAGCAGTACCTaGGCTACCCACAGTCCTTCACCACAGTCCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: AESRGTKVDSST*ATHSPSPQSSA Trigger: GGCTGAGGACTGTGGTGAAGGACTGTGGGTAGCCCAGGTACTGCTGTCAACCTTAGTACCTCTGCTTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| 3UTR CCA 72 bp | AGCTTGCCAGCTTACTGGTGGCCTGGTGACGTGTTCTaGGCAGTTTCCCTCTCCATGATCTGTAGAGAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: SLPAYWWPGDVF*AVSLSMICRER Trigger: TCGCTCTCTACAGATCATGGAGAGGGAAACTGCCCAGAACACGTCACCAGGCCACCAGTAAGCTGGCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CCA 72 bp | TGGGCAATGGAGGCCCACACCTTGAATCCTAGCTCTTaGGAGGCAAAGGCACGTGGATCTGAGATGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WAMEAHTLNPSS*EAKARGSEMKD Trigger: GTCCTTCATCTCAGATCCACGTGCCTTTGCCTCCCAAGAGCTAGGATTCAAGGTGTGGGCCTCCATTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR TCA 72 bp | GGCCTGGTGACGTGTTCTGGGCAGTTTCCCTCTCCATaGTCTGTAGAGAGCGACATCTTACATAGGTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: GLVTCSGQFPSP*SVESDILHRSP Trigger: GGGTGACCTATGTAAGATGTCGCTCTCTACAGATCATGGAGAGGGAAACTGCCCAGAACACGTCACCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR TCA 72 bp | GTTGAGCTTTCAGTTGGGCAATGGAGGCCCACACCTTaGATCCTAGCTCTTGGGAGGCAAAGGCACGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VELSVGQWRPTP*ILALGRQRHVD Trigger: ATCCACGTGCCTTTGCCTCCCAAGAGCTAGGATTCAAGGTGTGGGCCTCCATTGCCCAACTGAAAGCTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR GCA 72 bp | CAGTCCTTCACCACAGTCCTCAGCCACGGTTCTAAGTaGAGCACTTTGTGGTCAGAGAGCAAGCTGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QSFTTVLSHGSK*STLWSESKLLL Trigger: AAGCAGCAGCTTGCTCTCTGACCACAAAGTGCTGCACTTAGAACCGTGGCTGAGGACTGTGGTGAAGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR GCA 72 bp | GCAAAATCTCAAAGAGATGACATCCATAAGGGAGCTTaGCAGCTTACTGGTGGCCTGGTGACGTGTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AKSQRDDIHKGA*QLTGGLVTCSG Trigger: CCCAGAACACGTCACCAGGCCACCAGTAAGCTGGCAAGCTCCCTTATGGATGTCATCTCTTTGAGATTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR GCA 72 bp | GCCCAACCAAGGGTTGTCAATCTACCTTTTGGCAGCTaGAACATTCCCTTCTCACAAGCCAGGCATTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: AQPRVVNLPFGS*NIPFSQARHCT Trigger: AGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAGGTAGATTGACAACCCTTGGTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CCA 72 bp | TGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTaGTCACAGCCTACCAGGGAAGGGACATTAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: CNIPFSQARHCT*SQPTREGTLTQ Trigger: CTGTGTTAATGTCCCTTCCCTGGTAGGCTGTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR GCA 72 bp | GTTCTAAGTGCAGCACTTTGTGGTCAGAGAGCAAGCTaGTGCTTCTACCTTAACAGAAAGCAGAACCGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLSAALCGQRAS*CFYLNRKQNRH Trigger: GTGCCGGTTCTGCTTTCTGTTAAGGTAGAAGCAGCAGCTTGCTCTCTGACCACAAAGTGCTGCACTTAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CCA 72 bp | AGCACTCTTCAGTCGTACACTAAGTGCGACACCTTGTaGCCAGAGAGCAGGCTGCTTTTTACTTCTACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: STLQSYTKCDTL*PESRLLFTSTL Trigger: TAGGGTAGAAGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTGAAGAGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR TCA 72 bp | TCACCCGGAAAGGATGGTGTAGCCTACCGTAAGATATaGAAGAACTTGGAGTGCACTGTCTGCCAACATAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPGKDGVAYRKI*KNLECTVCQHR Trigger: CCTATGTTGGCAGACAGTGCACTCCAAGTTCTTTCATATCTTACGGTAGGCTACACCATCCTTTCCGGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CCA 72 bp | GTAAACCACAGAGCTGAATTACAGGTAATCATCACATaGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VNHRAELQVIIT*EHFSFTMAPER Trigger: CCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGATTACCTGTAATTCAGCTCTGTGGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR TCA 72 bp | GTCTTTCAAGAACTTCAGGAAACACCAATTTGGAATTaGGGTAATTTGCAACGGAGCACTCTGGGACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VFQELQETPIWN*GNLQRSTLGPG Trigger: CCCTGGTCCCAGAGTGCTCCGTTGCAAATTACCTCAATTCCAAATTGGTGTTTCCTGAAGTTCTTGAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAGGCACGTGGATCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTTTGTCAATCTACCTTTaGGCAGCTGCAACATTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AKARGSEMKDSLIYRVSSLSIYL*AAATFP Trigger: AGGGAATGTTGCAGCTGCCAAAAGGTAGATTGACAA...AGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR GCA 72 bp | AACTTCAGGAAACACCAATTTGGAATTGAGGTAATTTaGAACGGAGCACTCTGGGACCAGGGAAAAATTACC | + |
|
Preference number: 3 (lower is better) Translates to: NFRKHQFGIEVI*NGALWDQGKIT Trigger: GGTAATTTTTCCCTGGTCCCAGAGTGCTCCGTTGCAAATTACCTCAATTCCAAATTGGTGTTTCCTGAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAGGCTTTCAGCTCCTCCACTAAGAACACACACAGAGTATTTGATAGGCATCCTCCAGATCACATTTaGGTTTTTGCTTTCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QEAFSSSTKNTHRVFDRHPPDHI*VFAFSL Trigger: TAAAGAGAAAGCAAAAACCAAAATGTGATCTGGAGG...ATGCCTATCAAATACTCTGTGTGTGTTCTTAGTGGAGGAGCTGAAAGCCTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGCCTCCAGATCACATTTaGGTTTTTGCTTTCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KQGQKTTQEISSKTRARVPPDHI*VFAFSL Trigger: TAAAGAGAAAGCAAAAACCAAAATGTGATCTGGAGG...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| 3UTR GCA 72 bp | CCAACACAGACGATGTTAGCCTTCCCAAACAACTACTaGAGGTACATTAAGCAAAATCTCAAAGAGATGACA | + |
|
Preference number: 3 (lower is better) Translates to: PTQTMLAFPNNY*RYIKQNLKEMT Trigger: TGTCATCTCTTTGAGATTTTGCTTAATGTACCTGCAGTAGTTGTTTGGGAAGGCTAACATCGTCTGTGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR TCA 72 bp | ACATGGTATATACATACTAGTTGTAAACCACAGAGCTaGATTACAGGTAATCATCACATGGGAGCACTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TWYIHTSCKPQS*ITGNHHMGALQ Trigger: CTGAAGTGCTCCCATGTGATGATTACCTGTAATTCAGCTCTGTGGTTTACAACTAGTATGTATATACCATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGACCTCCAGATCACATTTaGGTTTTTGCTTTCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RFTKQGQKTTQEISSKTRPPDHI*VFAFSL Trigger: TAAAGAGAAAGCAAAAACCAAAATGTGATCTGGAGG...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCCCTCCAGATCACATTTaGGTTTTTGCTTTCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: NRFTKQGQKTTQEISSKTPPDHI*VFAFSL Trigger: TAAAGAGAAAGCAAAAACCAAAATGTGATCTGGAGG...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | TCATCACATGGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGGAGGTGGGCTTGGGGCCAGCAGCGGGTaGGTGCCCATTGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHGSTSALPWPLKGGGLGASSG*VPIEEL Trigger: CAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCC...AAGCCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCGTACACTAAGTGCGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTGGAGCCCAGCGAGGTTaGGGCCAGCAGCGGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QSYTKCDTLWPESRLLFTGAQRG*GQQRVR Trigger: ACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCC...AGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCGGCTTCTGGCCAACTGGACATAAGGAACCAGGGTTACCAAGGCTCCTAAGTCCGACGTCTCTATaGTCCCCAGGGTGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAGFWPTGHKEPGLPRLLSPTSL*SPGWGL Trigger: AAGGCCCCACCCTGGGGAGCATAGAGACGTCGGACT...TAGGAGCCTTGGTAACCCTGGTTCCTTATGTCCAGTTGGCCAGAAGCCGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | TACACTAAGTGCGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTTCTACCGGAGCCCAGCGAGGTTaGGGCCAGCAGCGGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YTKCDTLWPESRLLFTSTGAQRG*GQQRVR Trigger: ACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCC...GGTAGAAGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACGTGTTCTGGGCAGTTTCCCTCTCCATGATCTGTAGAGAGCGACATCTTAGCTGGATCCCATGCTaGCCACGGTGCAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDVFWAVSLSMICRERHLSWIPC*PRCSSP Trigger: TGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCT...AAGATGTCGCTCTCTACAGATCATGGAGAGGGAAACTGCCCAGAACACGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGGGAGCCCAGCGAGGTTaGGGCCAGCAGCGGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVGAQRG*GQQRVR Trigger: ACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCC...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTGGTCACATGCCTGTTGGCCTGTaGGAGCCCAGCGAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAAATFPSHKPGIALGHMPVGL*EPSEVG Trigger: CCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCAT...GTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGGGGGCCAGCAGCGGGTaGGTGCCCATTGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVGASSG*VPIEEL Trigger: CAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCC...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGCTTTCAGCTCCTCCACTAAGAACACACACAGAGTATTTGATAGGCATGGGGCCAGCAGCGGGTaGGTGCCCATTGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QEAFSSSTKNTHRVFDRHGASSG*VPIEEL Trigger: CAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCC...ATGCCTATCAAATACTCTGTGTGTGTTCTTAGTGGAGGAGCTGAAAGCCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AAGCACATGTCTGTAGGGCTCCACCCACCGAAGGCTGCACAGGTTGCACAGGCCCGTGTAGGCGAAGGCTaGAAACCCAACTATAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHMSVGLHPPKAAQVAQARVGEG*KPNYNK Trigger: TTTGTTATAGTTGGGTTTGCAGCCTTCGCCTACACG...GGCCTGTGCAACCTGTGCAGCCTTCGGTGGGTGGAGCCCTACAGACATGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CAA 72 bp | CGAAGGCTGCACAGGTTGCACAGGCCCAACCAAGGGTaGTCAATCTACCTTTTGGCAGCTGCAACATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLHRLHRPNQG*SIYLLAAATFP Trigger: AGGGAATGTTGCAGCTGCCAAAAGGTAGATTGACAACCCTTGGTTGGGCCTGTGCAACCTGTGCAGCCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGCCATGCTGGCCACGGTaGAGCTCCCCATCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVPCWPR*SSPSGT Trigger: GGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGG...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGAGCTGGATCCCATGCTaGCCACGGTGCAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVSWIPC*PRCSSP Trigger: TGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCT...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGATGCCTGTTGGCCTGTaGGAGCCCAGCGAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVMPVGL*EPSEVG Trigger: CCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCAT...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGTCATGCCTGTTGGCCTGTaGGAGCCCAGCGAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIYRVSSRTAGDTQRNPVMPVGL*EPSEVG Trigger: CCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCAT...GACAGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGGTCCGTGATGCCTGTTaGCCTGTGGGAGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVVRDAC*PVGAQR Trigger: TCGCTGGGCTCCCACAGGCCAACAGGCATCACGGAC...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGTCGTCCGTGATGCCTGTTaGCCTGTGGGAGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIYRVSSRTAGDTQRNPVVRDAC*PVGAQR Trigger: TCGCTGGGCTCCCACAGGCCAACAGGCATCACGGAC...GACAGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CAA 72 bp | CATCACTCAAGGGAGCTGAAAGCAGAGGTACTAAGGTaGACAGCAGTACCTGGGCTACCCACAGTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HHSRELKAEVLR*TAVPGLPTVLH Trigger: GTGAAGGACTGTGGGTAGCCCAGGTACTGCTGTCAACCTTAGTACCTCTGCTTTCAGCTCCCTTGAGTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGAGTCCGACGTCTCTATaGTCCCCAGGGTGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVSPTSL*SPGWGL Trigger: AAGGCCCCACCCTGGGGAGCATAGAGACGTCGGACT...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | TTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGTCAGTCCGACGTCTCTATaGTCCCCAGGGTGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIYRVSSRTAGDTQRNPVSPTSL*SPGWGL Trigger: AAGGCCCCACCCTGGGGAGCATAGAGACGTCGGACT...GACAGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCGGCTTCTGGCCAACTGGACATAAGGAACCAGGGTTACCAAGGCTCCTACGTGTAGGCGAAGGCTaGAAACCCAACTATAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RAGFWPTGHKEPGLPRLLRVGEG*KPNYNK Trigger: TTTGTTATAGTTGGGTTTGCAGCCTTCGCCTACACG...TAGGAGCCTTGGTAACCCTGGTTCCTTATGTCCAGTTGGCCAGAAGCCGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGGAGCCCAGCGAGGTTaGGGCCAGCAGCGGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRGAQRG*GQQRVR Trigger: ACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGCACGTGGATCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTGTCCGTGATGCCTGTTaGCCTGTGGGAGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AKARGSEMKDSLIYRVSSVRDAC*PVGAQR Trigger: TCGCTGGGCTCCCACAGGCCAACAGGCATCACGGAC...AGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGGGGCCAGCAGCGGGTaGGTGCCCATTGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRGASSG*VPIEEL Trigger: CAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACGTGTTCTGGGCAGTTTCCCTCTCCATGATCTGTAGAGAGCGACATCTTATCAGGAACCACGTCTaGCAAAGGAAGATTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDVFWAVSLSMICRERHLIRNHV*QRKILG Trigger: CCCCAGAATCTTCCTTTGCCAGACGTGGTTCCTGAT...AAGATGTCGCTCTCTACAGATCATGGAGAGGGAAACTGCCCAGAACACGTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CAA 72 bp | CTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTaGGTCACAGCCTACCAGGGAAGGGACATTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LQHSLLTSQALH*VTAYQGRDINT Trigger: TGTGTTAATGTCCCTTCCCTGGTAGGCTGTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CAA 72 bp | TCTAGGACAGCTGGGGACACACAGAGAAACCCTGTCTaGAAATCCCTAAACTCCCATAAAGGCCATGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTAGDTQRNPV*KSLNSHKGHAG Trigger: CCCAGCATGGCCTTTATGGGAGTTTAGGGATTTCAAGACAGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| 3UTR CAA 72 bp | CACAGCACTCTTCAGTCGTACACTAAGTGCGACACCTaGTGGCCAGAGAGCAGGCTGCTTTTTACTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: HSTLQSYTKCDT*WPESRLLFTST Trigger: GGTAGAAGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTGAAGAGTGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR TCA 90 bp | TTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGTCTTCTCAGCACGTACTTaGCCGTGTAGGCGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIYRVSSRTAGDTQRNPVFSART*PCRRRL Trigger: CAGCCTTCGCCTACACGGTCAAGTACGTGCTGAGAA...GACAGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGTTCTCAGCACGTACTTaGCCGTGTAGGCGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVFSART*PCRRRL Trigger: CAGCCTTCGCCTACACGGTCAAGTACGTGCTGAGAA...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCGGCTTCTGGCCAACTGGACATAAGGAACCAGGGTTACCAAGGCTCCTAACAGATGTAAGGCACTaGGTCTTTCTTAATTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGFWPTGHKEPGLPRLLTDVRH*VFLNSK Trigger: CTTCGAATTAAGAAAGACCCAGTGCCTTACATCTGT...TAGGAGCCTTGGTAACCCTGGTTCCTTATGTCCAGTTGGCCAGAAGCCGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | TCATCACATGGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGGAGGTGGGCTTCTTCAACCTTTGTGTTaGTGTTGTTGGAGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHGSTSALPWPLKGGGLLQPLC*CCWSSL Trigger: AAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAG...AAGCCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCCCATGCTGGCCACGGTaGAGCTCCCCATCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTPCWPR*SSPSGT Trigger: GGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGG...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCAGCTCCTCCACTAAGAACACACACAGAGTATTTGATAGGCATTAAAGTTCCATGCTGGCCACGGTaGAGCTCCCCATCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSAPPLRTHTEYLIGIKVPCWPR*SSPSGT Trigger: GGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGG...AACTTTAATGCCTATCAAATACTCTGTGTGTGTTCTTAGTGGAGGAGCTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAAGCTGGATCCCATGCTaGCCACGGTGCAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRSWIPC*PRCSSP Trigger: TGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCT...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGCTGGATCCCATGCTaGCCACGGTGCAGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTSWIPC*PRCSSP Trigger: TGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCT...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCATGCCTGTTGGCCTGTaGGAGCCCAGCGAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTMPVGL*EPSEVG Trigger: CCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCAT...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAATGCCTGTTGGCCTGTaGGAGCCCAGCGAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRMPVGL*EPSEVG Trigger: CCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCAT...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCGTCCGTGATGCCTGTTaGCCTGTGGGAGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTVRDAC*PVGAQR Trigger: TCGCTGGGCTCCCACAGGCCAACAGGCATCACGGAC...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGTCCGTGATGCCTGTTaGCCTGTGGGAGCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRVRDAC*PVGAQR Trigger: TCGCTGGGCTCCCACAGGCCAACAGGCATCACGGAC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAAGTCCGACGTCTCTATaGTCCCCAGGGTGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRSPTSL*SPGWGL Trigger: AAGGCCCCACCCTGGGGAGCATAGAGACGTCGGACT...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | TCATCACATGGGAGCACTTCAGCTTTACCATGGCCCCTGAAAGGAGGTGGGCTTTATTGCTCATCTTTCTaGCAGAATCAAGGGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHGSTSALPWPLKGGGLYCSSF*QNQGLL Trigger: CAAAAGCCCTTGATTCTGCCAGAAAGATGAGCAATA...AAGCCCACCTCCTTTCAGGGGCCATGGTAAAGCTGAAGTGCTCCCATGTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024056.10 |
||
| CDS-3UTR CCA 90 bp | CTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTGGTCACAGCCTACCAGACAGATGTAAGGCACTaGGTCTTTCTTAATTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQHSLLTSQALHLVTAYQTDVRH*VFLNSK Trigger: CTTCGAATTAAGAAAGACCCAGTGCCTTACATCTGT...CTGGTAGGCTGTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACGTGTTCTGGGCAGTTTCCCTCTCCATGATCTGTAGAGAGCGACATCTTTTCCATGTATCTGGGTaGAAATCTGTGATGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDVFWAVSLSMICRERHLFHVSG*KSVMER Trigger: TCTCTCCATCACAGATTTCCACCCAGATACATGGAA...AAGATGTCGCTCTCTACAGATCATGGAGAGGGAAACTGCCCAGAACACGTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGATCAGGAACCACGTCTaGCAAAGGAAGATTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVIRNHV*QRKILG Trigger: CCCCAGAATCTTCCTTTGCCAGACGTGGTTCCTGAT...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR TCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGCCATTCAAGAATATTTaGAGGGAGGGGCTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVPFKNI*REGLCT Trigger: TGTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGG...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | GGTATATACATACTAGTTGTAAACCACAGAGCTGAATTACAGGTAATCATCACACCATGCTGGCCACGGTaGAGCTCCCCATCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GIYILVVNHRAELQVIITPCWPR*SSPSGT Trigger: GGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGG...TGTGATGATTACCTGTAATTCAGCTCTGTGGTTTACAACTAGTATGTATATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR TCA 90 bp | GCAAAGGCACGTGGATCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTCCATTCAAGAATATTTaGAGGGAGGGGCTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AKARGSEMKDSLIYRVSSPFKNI*REGLCT Trigger: TGTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGG...AGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGATCCACGTGCCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGCGTGTAGGCGAAGGCTaGAAACCCAACTATAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVRVGEG*KPNYNK Trigger: TTTGTTATAGTTGGGTTTGCAGCCTTCGCCTACACG...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGCTTCAACCTTTGTGTTaGTGTTGTTGGAGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVLQPLC*CCWSSL Trigger: AAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAG...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGTTCCATGTATCTGGGTaGAAATCTGTGATGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVFHVSG*KSVMER Trigger: TCTCTCCATCACAGATTTCCACCCAGATACATGGAA...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGTATTGCTCATCTTTCTaGCAGAATCAAGGGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVYCSSF*QNQGLL Trigger: CAAAAGCCCTTGATTCTGCCAGAAAGATGAGCAATA...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTTTGTGTTGCTGTTGTTaGAGCTCTCTTATTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLIYRVSSRTAGDTQRNPLCCCC*SSLIAV Trigger: AACAGCAATAAGAGAGCTCCAACAACAGCAACACAA...AGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGACAGATGTAAGGCACTaGGTCTTTCTTAATTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQGQKTTQEISSKTRARVTDVRH*VFLNSK Trigger: CTTCGAATTAAGAAAGACCCAGTGCCTTACATCTGT...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAATCAGGAACCACGTCTaGCAAAGGAAGATTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRIRNHV*QRKILG Trigger: CCCCAGAATCTTCCTTTGCCAGACGTGGTTCCTGAT...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCATCAGGAACCACGTCTaGCAAAGGAAGATTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTIRNHV*QRKILG Trigger: CCCCAGAATCTTCCTTTGCCAGACGTGGTTCCTGAT...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGACCATTCAAGAATATTTaGAGGGAGGGGCTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRPFKNI*REGLCT Trigger: TGTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGG...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACTTGGAGCTCTCTTATTaGTGTTATTGCTCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEMKDSLIYRVSSRTAGDLELSY*CYCSSF Trigger: GAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAA...GTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024056.10 |
||
| CDS-3UTR GCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCCGTGTAGGCGAAGGCTaGAAACCCAACTATAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTRVGEG*KPNYNK Trigger: TTTGTTATAGTTGGGTTTGCAGCCTTCGCCTACACG...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGACGTGTAGGCGAAGGCTaGAAACCCAACTATAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRRVGEG*KPNYNK Trigger: TTTGTTATAGTTGGGTTTGCAGCCTTCGCCTACACG...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | GGTATATACATACTAGTTGTAAACCACAGAGCTGAATTACAGGTAATCATCACAATCAGGAACCACGTCTaGCAAAGGAAGATTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIYILVVNHRAELQVIITIRNHV*QRKILG Trigger: CCCCAGAATCTTCCTTTGCCAGACGTGGTTCCTGAT...TGTGATGATTACCTGTAATTCAGCTCTGTGGTTTACAACTAGTATGTATATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCTTCCATGTATCTGGGTaGAAATCTGTGATGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTFHVSG*KSVMER Trigger: TCTCTCCATCACAGATTTCCACCCAGATACATGGAA...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGATATTGCTCATCTTTCTaGCAGAATCAAGGGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRYCSSF*QNQGLL Trigger: CAAAAGCCCTTGATTCTGCCAGAAAGATGAGCAATA...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGATTGTGTTGCTGTTGTTaGAGCTCTCTTATTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRLCCCC*SSLIAV Trigger: AACAGCAATAAGAGAGCTCCAACAACAGCAACACAA...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCACAGATGTAAGGCACTaGGTCTTTCTTAATTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTTDVRH*VFLNSK Trigger: CTTCGAATTAAGAAAGACCCAGTGCCTTACATCTGT...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAACAGATGTAAGGCACTaGGTCTTTCTTAATTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRTDVRH*VFLNSK Trigger: CTTCGAATTAAGAAAGACCCAGTGCCTTACATCTGT...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR GCA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGATTGGAGCTCTCTTATTaGTGTTATTGCTCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFTKQGQKTTQEISSKTRLELSY*CYCSSF Trigger: GAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAA...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR GCA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCTTGGAGCTCTCTTATTaGTGTTATTGCTCATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRFTKQGQKTTQEISSKTLELSY*CYCSSF Trigger: GAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAA...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR CCA 90 bp | GGTATATACATACTAGTTGTAAACCACAGAGCTGAATTACAGGTAATCATCACATTCCATGTATCTGGGTaGAAATCTGTGATGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIYILVVNHRAELQVIITFHVSG*KSVMER Trigger: TCTCTCCATCACAGATTTCCACCCAGATACATGGAA...TGTGATGATTACCTGTAATTCAGCTCTGTGGTTTACAACTAGTATGTATATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS CCA 90 bp | GTTCGCCAACGCGCCGCCCAGGAGTCCGTGATGCCTGTTGGCCTGTaGGAGCCCAGCGAGGTTGGGGCCAGCAGCGGGTGCGTGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VRQRAAQESVMPVGL*EPSEVGASSGCVPI Trigger: AATGGGCACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCATCACGGACTCCTGGGCGGCGCGTTGGCGAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS TCA 90 bp | GTGGGAGCCCAGCGAGGTTGGGGCCAGCAGCGGGTGCGTGCCCATTaGGGAGCTGGATCCCATGCTGGCCACGGTGCAGCTCCCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGAQRGWGQQRVRAH*GAGSHAGHGAAPHQ Trigger: CTGATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CCA 90 bp | CCAGCGAGGTTGGGGCCAGCAGCGGGTGCGTGCCCATTGAGGAGCTaGATCCCATGCTGGCCACGGTGCAGCTCCCCATCAGGAACCACG | + |
|
Preference number: 5 (lower is better) Translates to: PARLGPAAGACPLRS*IPCWPRCSSPSGTT Trigger: CGTGGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAACCTCGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CCA 90 bp | GGGCCAGCAGCGGGTGCGTGCCCATTGAGGAGCTGGATCCCATGCTaGCCACGGTGCAGCTCCCCATCAGGAACCACGTCTGGCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPAAGACPLRSWIPC*PRCSSPSGTTSGKG Trigger: TCCTTTGCCAGACGTGGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS GCA 90 bp | TTGGGGCCAGCAGCGGGTGCGTGCCCATTGAGGAGCTGGATCCCATaGTGGCCACGGTGCAGCTCCCCATCAGGAACCACGTCTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGPAAGACPLRSWIP*WPRCSSPSGTTSGK Trigger: TTTGCCAGACGTGGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS TCA 90 bp | CCAACTATAACAAACAAGTTCGCCAACGCGCCGCCCAGGAGTCCGTaGTGCCTGTTGGCCTGTGGGAGCCCAGCGAGGTTGGGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTITNKFANAPPRSP*CLLACGSPARLGPA Trigger: TGCTGGCCCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCATCACGGACTCCTGGGCGGCGCGTTGGCGAACTTGTTTGTTATAGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACACACAGAGAAACCCTGGGAGCCCAGCGAGGTaGGGGCCAGCAGCGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLIYRVSSRTAGDTQRNPGSPAR*GPAAGA Trigger: CGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCC...AGGGTTTCTCTGTGTGTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGGGGAGCCCAGCGAGGTaGGGGCCAGCAGCGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KQGQKTTQEISSKTRARVGSPAR*GPAAGA Trigger: CGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCC...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | TCTGAGATGAAGGACAGCTTGATTTATAGAGTGAGTTCTAGGACAGCTGGGGACGGGAGCCCAGCGAGGTaGGGGCCAGCAGCGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SEMKDSLIYRVSSRTAGDGSPAR*GPAAGA Trigger: CGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCC...GTCCCCAGCTGTCCTAGAACTCACTCTATAAATCAAGCTGTCCTTCATCTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS GCA 90 bp | CTGTGCTATGCTTCTCAGCACGTACTTGACCGTGTAGGCGAAGGCTaGAAACCCAACTATAACAAACAAGTTCGCCAACGCGCCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCYASQHVLDRVGEG*KPNYNKQVRQRAAQ Trigger: CTGGGCGGCGCGTTGGCGAACTTGTTTGTTATAGTTGGGTTTGCAGCCTTCGCCTACACGGTCAAGTACGTGCTGAGAAGCATAGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCGGGAGCCCAGCGAGGTaGGGGCCAGCAGCGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NRFTKQGQKTTQEISSKTGSPAR*GPAAGA Trigger: CGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCC...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGGGAGCCCAGCGAGGTaGGGGCCAGCAGCGGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RFTKQGQKTTQEISSKTRGSPAR*GPAAGA Trigger: CGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AAGCACATGTCTGTAGGGCTCCACCCACCGAAGGCTGCACAGGTTGCACAGGCCGTTGGAGCTCTCTTATaGCTGTTATTGCTCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KHMSVGLHPPKAAQVAQAVGALL*LLLLIF Trigger: AAAGATGAGCAATAACAGCAATAAGAGAGCTCCAAC...GGCCTGTGCAACCTGTGCAGCCTTCGGTGGGTGGAGCCCTACAGACATGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024056.10 |
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| CDS-3UTR CAA 90 bp | CAGTCGTACACTAAGTGCGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTGTCCTGCTTCAACCTTaGTGTTGCTGTTGTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSYTKCDTLWPESRLLFTVLLQP*CCCCWS Trigger: GCTCCAACAACAGCAACACAAAGGTTGAAGCAGGAC...AGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | CTTTTGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTGGTCACGCCATTCAAGAATATTaGAAGGGAGGGGCTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLAAATFPSHKPGIALGHAIQEY*KGGALH Trigger: GTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGC...GTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | CAGTCGTACACTAAGTGCGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTGCTTCAACCTTTGTGTaGCTGTTGTTGGAGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSYTKCDTLWPESRLLFTASTFV*LLLELS Trigger: AGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGC...AGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS CCA 90 bp | GTTAGAATGGTGGAGACGGACCACGCTGGATTCCATGTATCTGGGTaGAAATCTGTGATGGAGAGACACAGCCTTGTGTTGCACTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VRMVETDHAGFHVSG*KSVMERHSLVLHLN Trigger: ATTTAAGTGCAACACAAGGCTGTGTCTCTCCATCACAGATTTCCACCCAGATACATGGAATCCAGCGTGGTCCGTCTCCACCATTCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000152536.8 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGGTCCTGCTTCAACCTTaGTGTTGCTGTTGTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQGQKTTQEISSKTRARVVLLQP*CCCCWS Trigger: GCTCCAACAACAGCAACACAAAGGTTGAAGCAGGAC...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGGCCATTCAAGAATATTaGAAGGGAGGGGCTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KQGQKTTQEISSKTRARVAIQEY*KGGALH Trigger: GTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGC...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | CTTTTGGCAGCTGCAACATTCCCTTCTCACAAGCCAGGCATTGCACTTGGTCACCTCTTATTGCTGTTATaGCTCATCTTTCTGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLAAATFPSHKPGIALGHLLLLL*LIFLAE Trigger: TTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAG...GTGACCAAGTGCAATGCCTGGCTTGTGAGAAGGGAATGTTGCAGCTGCCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024056.10 |
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| CDS-3UTR CAA 90 bp | TACACTAAGTGCGACACCTTGTGGCCAGAGAGCAGGCTGCTTTTTACTTCTACCAGACACAGCCTTGTGTaGCACTTAAATCTTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: YTKCDTLWPESRLLFTSTRHSLV*HLNLPL Trigger: CAATGGAAGATTTAAGTGCAACACAAGGCTGTGTCT...GGTAGAAGTAAAAAGCAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS GCA 90 bp | AGTCCTGCTTCAACCTTTGTGTTGCTGTTGTTGGAGCTCTCTTATTaGTGTTATTGCTCATCTTTCTGGCAGAATCAAGGGCTTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPASTFVLLLLELSY*CYCSSFWQNQGLLP Trigger: AGGCAAAAGCCCTTGATTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR CAA 90 bp | CAGGAGGCTTTCAGCTCCTCCACTAAGAACACACACAGAGTATTTGATAGGCATTTTGTGTTGCTGTTGTaGGAGCTCTCTTATTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QEAFSSSTKNTHRVFDRHFVLLL*ELSYCC Trigger: ACAGCAATAAGAGAGCTCCAACAACAGCAACACAAA...ATGCCTATCAAATACTCTGTGTGTGTTCTTAGTGGAGGAGCTGAAAGCCTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGTTTGTGTTGCTGTTGTaGGAGCTCTCTTATTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KQGQKTTQEISSKTRARVFVLLL*ELSYCC Trigger: ACAGCAATAAGAGAGCTCCAACAACAGCAACACAAA...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGAGACACAGCCTTGTGTaGCACTTAAATCTTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KQGQKTTQEISSKTRARVRHSLV*HLNLPL Trigger: CAATGGAAGATTTAAGTGCAACACAAGGCTGTGTCT...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCGCGAGTGCTCTTATTGCTGTTATaGCTCATCTTTCTGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KQGQKTTQEISSKTRARVLLLLL*LIFLAE Trigger: TTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAG...CACTCGCGCTCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCTCCTCCACTAAGAACACACACAGAGTATTTGATAGGCATTAAAGTTGTCCTGCTTCAACCTTaGTGTTGCTGTTGTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSAPPLRTHTEYLIGIKVVLLQP*CCCCWS Trigger: GCTCCAACAACAGCAACACAAAGGTTGAAGCAGGAC...AACTTTAATGCCTATCAAATACTCTGTGTGTGTTCTTAGTGGAGGAGCTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGTCCTGCTTCAACCTTaGTGTTGCTGTTGTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFTKQGQKTTQEISSKTRVLLQP*CCCCWS Trigger: GCTCCAACAACAGCAACACAAAGGTTGAAGCAGGAC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCCATTCAAGAATATTaGAAGGGAGGGGCTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RFTKQGQKTTQEISSKTRAIQEY*KGGALH Trigger: GTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCGCCATTCAAGAATATTaGAAGGGAGGGGCTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NRFTKQGQKTTQEISSKTAIQEY*KGGALH Trigger: GTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGC...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS CCA 90 bp | CTTAATTCGAAGGTAGTCCTGCTTCAACCTTTGTGTTGCTGTTGTTaGAGCTCTCTTATTGCTGTTATTGCTCATCTTTCTGGCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LNSKVVLLQPLCCCC*SSLIAVIAHLSGRI Trigger: GATTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACTACCTTCGAATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR CAA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCGCTTCAACCTTTGTGTaGCTGTTGTTGGAGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: NRFTKQGQKTTQEISSKTASTFV*LLLELS Trigger: AGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGC...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGCTTCAACCTTTGTGTaGCTGTTGTTGGAGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RFTKQGQKTTQEISSKTRASTFV*LLLELS Trigger: AGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS GCA 90 bp | TGGGTCTTTCTTAATTCGAAGGTAGTCCTGCTTCAACCTTTGTGTTaGTGTTGTTGGAGCTCTCTTATTGCTGTTATTGCTCATCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: WVFLNSKVVLLQPLC*CCWSSLIAVIAHLS Trigger: AGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACTACCTTCGAATTAAGAAAGACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR CAA 90 bp | GGTATATACATACTAGTTGTAAACCACAGAGCTGAATTACAGGTAATCATCACAGCCATTCAAGAATATTaGAAGGGAGGGGCTCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: GIYILVVNHRAELQVIITAIQEY*KGGALH Trigger: GTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGC...TGTGATGATTACCTGTAATTCAGCTCTGTGGTTTACAACTAGTATGTATATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCTTTGTGTTGCTGTTGTaGGAGCTCTCTTATTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: NRFTKQGQKTTQEISSKTFVLLL*ELSYCC Trigger: ACAGCAATAAGAGAGCTCCAACAACAGCAACACAAA...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCTCCTCCACTAAGAACACACACAGAGTATTTGATAGGCATTAAAGTTTTTGTGTTGCTGTTGTaGGAGCTCTCTTATTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LSAPPLRTHTEYLIGIKVFVLLL*ELSYCC Trigger: ACAGCAATAAGAGAGCTCCAACAACAGCAACACAAA...AACTTTAATGCCTATCAAATACTCTGTGTGTGTTCTTAGTGGAGGAGCTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AACAGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGACACAGCCTTGTGTaGCACTTAAATCTTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: NRFTKQGQKTTQEISSKTRHSLV*HLNLPL Trigger: CAATGGAAGATTTAAGTGCAACACAAGGCTGTGTCT...GGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAAGACACAGCCTTGTGTaGCACTTAAATCTTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: RFTKQGQKTTQEISSKTRRHSLV*HLNLPL Trigger: CAATGGAAGATTTAAGTGCAACACAAGGCTGTGTCT...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | CTTTCAGCTCCTCCACTAAGAACACACACAGAGTATTTGATAGGCATTAAAGTTAGACACAGCCTTGTGTaGCACTTAAATCTTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: LSAPPLRTHTEYLIGIKVRHSLV*HLNLPL Trigger: CAATGGAAGATTTAAGTGCAACACAAGGCTGTGTCT...AACTTTAATGCCTATCAAATACTCTGTGTGTGTTCTTAGTGGAGGAGCTGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024056.10 ENSMUST00000166489.8 |
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| CDS-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGACTCTTATTGCTGTTATaGCTCATCTTTCTGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RFTKQGQKTTQEISSKTRLLLLL*LIFLAE Trigger: TTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAG...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS-3UTR CAA 90 bp | AGGTTTACTAAACAGGGTCAAAAGACAACACAGGAGATAAGCAGTAAAACCAGAGTTGGAGCTCTCTTATaGCTGTTATTGCTCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: RFTKQGQKTTQEISSKTRVGALL*LLLLIF Trigger: AAAGATGAGCAATAACAGCAATAAGAGAGCTCCAAC...TCTGGTTTTACTGCTTATCTCCTGTGTTGTCTTTTGACCCTGTTTAGTAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS CCA 72 bp | CGCGCCGCCCAGGAGTCCGTGATGCCTGTTGGCCTGTaGGAGCCCAGCGAGGTTGGGGCCAGCAGCGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: RAAQESVMPVGL*EPSEVGASSGC Trigger: GCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCCACAGGCCAACAGGCATCACGGACTCCTGGGCGGCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS GCA 72 bp | CTGTGGGAGCCCAGCGAGGTTGGGGCCAGCAGCGGGTaGGTGCCCATTGAGGAGCTGGATCCCATGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LWEPSEVGASSG*VPIEELDPMLA Trigger: GGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCCACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CAA 72 bp | CCAGCGAGGTTGGGGCCAGCAGCGGGTGCGTGCCCATaGAGGAGCTGGATCCCATGCTGGCCACGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PARLGPAAGACP*RSWIPCWPRCS Trigger: GCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAACCTCGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CAA 90 bp | TGTGGGAGCCCAGCGAGGTTGGGGCCAGCAGCGGGTGCGTGCCCATaGAGGAGCTGGATCCCATGCTGGCCACGGTGCAGCTCCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: CGSPARLGPAAGACP*RSWIPCWPRCSSPS Trigger: TGATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAACCTCGCTGGGCTCCCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS TCA 72 bp | CAGCGAGGTTGGGGCCAGCAGCGGGTGCGTGCCCATTaGGGAGCTGGATCCCATGCTGGCCACGGTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: QRGWGQQRVRAH*GAGSHAGHGAA Trigger: AGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAACCTCGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CCA 72 bp | TTGGGGCCAGCAGCGGGTGCGTGCCCATTGAGGAGCTaGATCCCATGCTGGCCACGGTGCAGCTCCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LGPAAGACPLRS*IPCWPRCSSPS Trigger: TGATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CCA 72 bp | GCGGGTGCGTGCCCATTGAGGAGCTGGATCCCATGCTaGCCACGGTGCAGCTCCCCATCAGGAACCACGTCT | + |
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Preference number: 6 (lower is better) Translates to: AGACPLRSWIPC*PRCSSPSGTTS Trigger: AGACGTGGTTCCTGATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS TCA 72 bp | ACAAACAAGTTCGCCAACGCGCCGCCCAGGAGTCCGTaGTGCCTGTTGGCCTGTGGGAGCCCAGCGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: TNKFANAPPRSP*CLLACGSPARL Trigger: CAACCTCGCTGGGCTCCCACAGGCCAACAGGCATCACGGACTCCTGGGCGGCGCGTTGGCGAACTTGTTTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CCA 72 bp | GTGGAGACGGACCACGCTGGATTCCATGTATCTGGGTaGAAATCTGTGATGGAGAGACACAGCCTTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VETDHAGFHVSG*KSVMERHSLVL Trigger: CAACACAAGGCTGTGTCTCTCCATCACAGATTTCCACCCAGATACATGGAATCCAGCGTGGTCCGTCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000152536.8 ENSMUST00000166489.8 |
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| CDS GCA 72 bp | GCTTCTCAGCACGTACTTGACCGTGTAGGCGAAGGCTaGAAACCCAACTATAACAAACAAGTTCGCCAACGC | + |
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Preference number: 6 (lower is better) Translates to: ASQHVLDRVGEG*KPNYNKQVRQR Trigger: GCGTTGGCGAACTTGTTTGTTATAGTTGGGTTTGCAGCCTTCGCCTACACGGTCAAGTACGTGCTGAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS TCA 72 bp | AGGGCCTCGGACAACATAATGCCATTCAAGAATATTTaGAGGGAGGGGCTCTGCACAGATGTAAGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: RASDNIMPFKNI*REGLCTDVRHW Trigger: CCAGTGCCTTACATCTGTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGCATTATGTTGTCCGAGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS CAA 72 bp | CAGGGCCTCGGACAACATAATGCCATTCAAGAATATTaGAAGGGAGGGGCTCTGCACAGATGTAAGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: QGLGQHNAIQEY*KGGALHRCKAL Trigger: CAGTGCCTTACATCTGTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGCATTATGTTGTCCGAGGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000166489.8 |
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| CDS GCA 72 bp | GTGTTGCTGTTGTTGGAGCTCTCTTATTGCTGTTATTaGTCATCTTTCTGGCAGAATCAAGGGCTTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VLLLLELSYCCY*SSFWQNQGLLP Trigger: AGGCAAAAGCCCTTGATTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS CAA 72 bp | TGTGTTGCTGTTGTTGGAGCTCTCTTATTGCTGTTATaGCTCATCTTTCTGGCAGAATCAAGGGCTTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: CVAVVGALLLLL*LIFLAESRAFA Trigger: GGCAAAAGCCCTTGATTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS CAA 90 bp | AGGCACTGGGTCTTTCTTAATTCGAAGGTAGTCCTGCTTCAACCTTaGTGTTGCTGTTGTTGGAGCTCTCTTATTGCTGTTATTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RHWVFLNSKVVLLQP*CCCCWSSLIAVIAH Trigger: ATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACTACCTTCGAATTAAGAAAGACCCAGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000136492.2 ENSMUST00000166489.8 |
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| CDS GCA 72 bp | TCAACCTTTGTGTTGCTGTTGTTGGAGCTCTCTTATTaGTGTTATTGCTCATCTTTCTGGCAGAATCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: STFVLLLLELSY*CYCSSFWQNQG Trigger: CCCTTGATTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS CAA 72 bp | TTCGAAGGTAGTCCTGCTTCAACCTTTGTGTTGCTGTaGTTGGAGCTCTCTTATTGCTGTTATTGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: FEGSPASTFVLL*LELSYCCYCSS Trigger: AGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACTACCTTCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS GCA 72 bp | CTTAATTCGAAGGTAGTCCTGCTTCAACCTTTGTGTTaGTGTTGTTGGAGCTCTCTTATTGCTGTTATTGCT | + |
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Preference number: 6 (lower is better) Translates to: LNSKVVLLQPLC*CCWSSLIAVIA Trigger: AGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACTACCTTCGAATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000024056.10 ENSMUST00000103175.8 ENSMUST00000105581.5 ENSMUST00000105582.8 ENSMUST00000105583.9 ENSMUST00000118192.8 ENSMUST00000136492.2 ENSMUST00000166489.8 |
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| CDS CCA 72 bp | AAGGTAGTCCTGCTTCAACCTTTGTGTTGCTGTTGTTaGAGCTCTCTTATTGCTGTTATTGCTCATCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KVVLLQPLCCCC*SSLIAVIAHLS Trigger: AGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACTACCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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| CDS CAA 72 bp | TTCAACCTTTGTGTTGCTGTTGTTGGAGCTCTCTTATaGCTGTTATTGCTCATCTTTCTGGCAGAATCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FNLCVAVVGALL*LLLLIFLAESR Trigger: CCTTGATTCTGCCAGAAAGATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024056.10 ENSMUST00000105582.8 ENSMUST00000105583.9 |
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