Pregenerated sensors for UBE2I (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015120Ensembl transcript IDs: ENSMUST00000049911.16, ENSMUST00000172587.8, ENSMUST00000172618.8, ENSMUST00000172868.8, ENSMUST00000173084.8, ENSMUST00000173621.8, ENSMUST00000173713.8, ENSMUST00000174001.8, ENSMUST00000174031.8, ENSMUST00000174216.8
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACCAGCTCAGACCTGGCCTTACTTATCCTGGGCAGAATGGTGGTaGTGGGCACTGTACCCCCAAGCAAGTTCTGCTGAGCTGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: KPAQTWPYLSWAEWW*WALYPQASSAELNR Trigger: TCTGTTCAGCTCAGCAGAACTTGCTTGGGGGTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR TCA 90 bp | GCAAGTTCTGCTGAGCTGAACAGAGATCAGTCCAGCCTTCTCTTCTaGCCCCATGGTCTGAAGGCCATGAGCATCCCACAGAACACAGCA | + |
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Preference number: 1 (lower is better) Translates to: ASSAELNRDQSSLLF*PHGLKAMSIPQNTA Trigger: TGCTGTGTTCTGTGGGATGCTCATGGCCTTCAGACCATGGGGTCAGAAGAGAAGGCTGGACTGATCTCTGTTCAGCTCAGCAGAACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 90 bp | ATTTATAAACCAGCTCAGACCTGGCCTTACTTATCCTGGGCAGAATaGTGGTGGTGGGCACTGTACCCCCAAGCAAGTTCTGCTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: IYKPAQTWPYLSWAE*WWWALYPQASSAEL Trigger: CAGCTCAGCAGAACTTGCTTGGGGGTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGGTTTATAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR GCA 90 bp | TTTACTCTTCCTTGCCAACCATGTTTACTTCTACCAGCCATACCTTaGATGAATCTCAGCTGGCCCATGAGCCCCTCCCTGTTTTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: FTLPCQPCLLLPAIP*MNLSWPMSPSLFLA Trigger: GGCTAAAAACAGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGGTAGAAGTAAACATGGTTGGCAAGGAAGAGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 90 bp | GGAACTCTGCATCAGGTAACATCTATTTATAAACCAGCTCAGACCTaGCCTTACTTATCCTGGGCAGAATGGTGGTGGTGGGCACTGTAC | + |
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Preference number: 1 (lower is better) Translates to: GTLHQVTSIYKPAQT*PYLSWAEWWWWALY Trigger: GTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGGTTTATAAATAGATGTTACCTGATGCAGAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 90 bp | CAACCATGTTTACTTCTACCAGCCATACCTTGCATGAATCTCAGCTaGCCCATGAGCCCCTCCCTGTTTTTAGCCTCACTCAGCAATAGA | + |
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Preference number: 1 (lower is better) Translates to: QPCLLLPAIPCMNLS*PMSPSLFLASLSNR Trigger: TCTATTGCTGAGTGAGGCTAAAAACAGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGGTAGAAGTAAACATGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR TCA 90 bp | TTACCAACCTGGCTTCCGTGGTGTTCCTGTCTTTGTGAACATGTGTaGGCATTTCTACTGGTAGTTCTACAGAACAGTGGCAGGTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LPTWLPWCSCLCEHV*AFLLVVLQNSGRSA Trigger: AGCTGACCTGCCACTGTTCTGTAGAACTACCAGTAGAAATGCTCACACATGTTCACAAAGACAGGAACACCACGGAAGCCAGGTTGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR GCA 90 bp | AAGGAACCCACCATTTTGCTGTCTGGGGGTTTAGATGCTCCATCTTaGTTCCCTTTAATCTCAATTATTTCCCAGGCTGCTACTAATACA | + |
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Preference number: 1 (lower is better) Translates to: KEPTILLSGGLDAPS*FPLISIISQAATNT Trigger: TGTATTAGTAGCAGCCTGGGAAATAATTGAGATTAAAGGGAAGCAAGATGGAGCATCTAAACCCCCAGACAGCAAAATGGTGGGTTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAGCTCAGACCTGGCCTTACTTATCCTGGGCAGAATGGTGGTGGTGGGCACCAAGTTCTGCTGAGCTaGACAGAGATCAGTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: NQLRPGLTYPGQNGGGGHQVLLS*TEISPA Trigger: GGCTGGACTGATCTCTGTTCAGCTCAGCAGAACTTG...GTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAACAGCCTTCACATAACCCAGCAAGGGCCAAGAGCTTCTGCTGCCCAGCCCTGGCCTTACTTATCCTaGGCAGAATGGTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RNSLHITQQGPRASAAQPWPYLS*AEWWWW Trigger: CCACCACCACCATTCTGCCCAGGATAAGTAAGGCCA...GGGCTGGGCAGCAGAAGCTCTTGGCCCTTGCTGGGTTATGTGAAGGCTGTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTCAGGTCTCCTTCTCGATAACCCAGAAGAGCCTGACAAACGTGTACTCTTCCAGCCTTCTCTTCTaGCCCCATGGTCTGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LPQVSFSITQKSLTNVYSSSLLF*PHGLKA Trigger: GGCCTTCAGACCATGGGGTCAGAAGAGAAGGCTGGA...AGAGTACACGTTTGTCAGGCTCTTCTGGGTTATCGAGAAGGAGACCTGAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAACACAAGTCTGCTCCAGCAGGCATCTTTCCAATTCTGGGCTCTTCTTTGTAGGGCCAAGAGCTTCTaGTGCCCAGCCCTTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LNTSLLQQASFQFWALLCRAKSF*CPALGC Trigger: GCAGCCAAGGGCTGGGCAGCAGAAGCTCTTGGCCCT...ACAAAGAAGAGCCCAGAATTGGAAAGATGCCTGCTGGAGCAGACTTGTGTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CCA 90 bp | CACACCTGCACCAACTCTTTGACTTCTGATTCTTACCAACCTGGCTTCCGTGGTTCCTGGGCAGAATGGTaGTGGTGGGCACTGTACCCC | + |
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Preference number: 2 (lower is better) Translates to: HTCTNSLTSDSYQPGFRGSWAEW*WWALYP Trigger: GGGGTACAGTGCCCACCACCACCATTCTGCCCAGGA...ACCACGGAAGCCAGGTTGGTAAGAATCAGAAGTCAAAGAGTTGGTGCAGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CAA 90 bp | ACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTaGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TVRSDLDLQKVVNKF*PSQSLPRHGAQGRC Trigger: GCAGCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAACACCGAGTACAAGACCTCTCTCCCATGGCATTTGGTACCACTACAACACACAGCAGATGGGGATaGGTAAGAGTCTCCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GQHRVQDLSPMAFGTTTTHSRWG*VRVSSL Trigger: GAGAGAGGAGACTCTTACTCATCCCCATCTGCTGTG...TGTTGTAGTGGTACCAAATGCCATGGGAGAGAGGTCTTGTACTCGGTGTTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAACTCCAGGGTCACAATTATAGCCAATCCCCAAGGCCAACACCGAGTACAATGGGCAGAATGGTGGTaGTGGGCACTGTACCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LNSRVTIIANPQGQHRVQWAEWW*WALYPQ Trigger: TTGGGGGTACAGTGCCCACCACCACCATTCTGCCCA...TTGTACTCGGTGTTGGCCTTGGGGATTGGCTATAATTGTGACCCTGGAGTTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTACTGGTAGTTCTACAGAACAGTGGCAGGTCAGCTTTACTGGTGACAGCACCAGAAGCTTCAGCCTaGCACAACTCTCCCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: FLLVVLQNSGRSALLVTAPEASA*HNSPSA Trigger: GGCAGAGGGAGAGTTGTGTCAGGCTGAAGCTTCTGG...TGCTGTCACCAGTAAAGCTGACCTGCCACTGTTCTGTAGAACTACCAGTAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCATACCTTGCATGAATCTCAGCTGGCCCATGAGCCCCTCCCTGTTTTTACGTTGCATCCCTAGCTaGTGTCTTCTAAGACTGACT | + |
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Preference number: 2 (lower is better) Translates to: PAIPCMNLSWPMSPSLFLRCIPS*CLLRLT Trigger: AGTCAGTCTTAGAAGACACCAGCTAGGGATGCAACG...TAAAAACAGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CAA 90 bp | GTTTACTCTTCCTTGCCAACCATGTTTACTTCTACCAGCCATACCTaGCATGAATCTCAGCTGGCCCATGAGCCCCTCCCTGTTTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: VYSSLPTMFTSTSHT*HESQLAHEPLPVFS Trigger: GCTAAAAACAGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGGTAGAAGTAAACATGGTTGGCAAGGAAGAGTAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAGCTGCATGGATCAGACATTAAGGAACCCACCATTTTGCTGTCTGGGGGTTTCTCTTCTGACCCCATaGTCTGAAGGCCATGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LSCMDQTLRNPPFCCLGVSLLTP*SEGHEH Trigger: ATGCTCATGGCCTTCAGACCATGGGGTCAGAAGAGA...AACCCCCAGACAGCAAAATGGTGGGTTCCTTAATGTCTGATCCATGCAGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGCTATGCTCCATTTCTTCACGTTCACCTTTTTCCTCCTAAGCATGCTTTTATCCTGGGCAGAATaGTGGTGGTGGGCACTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LQAMLHFFTFTFFLLSMLLSWAE*WWWALY Trigger: GTACAGTGCCCACCACCACCATTCTGCCCAGGATAA...AAGCATGCTTAGGAGGAAAAAGGTGAACGTGAAGAAATGGAGCATAGCCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAACACAAGTCTGCTCCAGCAGGCATCTTTCCAATTCTGGGCTCTTCTTTGTAAGACCTCTCTCCCATaGCATTTGGTACCACTACAA | + |
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Preference number: 2 (lower is better) Translates to: LNTSLLQQASFQFWALLCKTSLP*HLVPLQ Trigger: TTGTAGTGGTACCAAATGCCATGGGAGAGAGGTCTT...ACAAAGAAGAGCCCAGAATTGGAAAGATGCCTGCTGGAGCAGACTTGTGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CAA 90 bp | TTCTTGGTTTTCCTAGCCAGTTTTGAGAGACTTGTCTCATTGTATTaGCTCAGGATTCCAGCACCACACGAAAGGAAAGAGACCAACAAC | + |
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Preference number: 2 (lower is better) Translates to: FLVFLASFERLVSLY*LRIPAPHERKETNN Trigger: GTTGTTGGTCTCTTTCCTTTCGTGTGGTGCTGGAATCCTGAGCAAATACAATGAGACAAGTCTCTCAAAACTGGCTAGGAAAACCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAACACAAGTCTGCTCCAGCAGGCATCTTTCCAATTCTGGGCTCTTCTTTCTTTGTGAACATGTGTaGGCATTTCTACTGGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: FSTQVCSSRHLSNSGLFFLCEHV*AFLLVV Trigger: AACTACCAGTAGAAATGCTCACACATGTTCACAAAG...AAAGAAGAGCCCAGAATTGGAAAGATGCCTGCTGGAGCAGACTTGTGTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CAA 90 bp | AGCAGGCATCTTTCCAATTCTGGGCTCTTCTTTGTGTCCTTTAACTaGTACTTTGCAAACACAAGTTTACTCTTCCTTGCCAACCATGTT | + |
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Preference number: 2 (lower is better) Translates to: SRHLSNSGLFFVSFN*YFANTSLLFLANHV Trigger: AACATGGTTGGCAAGGAAGAGTAAACTTGTGTTTGCAAAGTACAAGTTAAAGGACACAAAGAAGAGCCCAGAATTGGAAAGATGCCTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CAA 90 bp | TTGTGTCCTTTAACTTGTACTTTGCAAACACAAGTTTACTCTTCCTaGCCAACCATGTTTACTTCTACCAGCCATACCTTGCATGAATCT | + |
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Preference number: 2 (lower is better) Translates to: LCPLTCTLQTQVYSS*PTMFTSTSHTLHES Trigger: AGATTCATGCAAGGTATGGCTGGTAGAAGTAAACATGGTTGGCAAGGAAGAGTAAACTTGTGTTTGCAAAGTACAAGTTAAAGGACACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | CCCAGCAAGGGCCAAGAGCTTCTGCTGCCCAGCCCTTaGCTGCCTCAGGTCTCCTTCTCGATAACCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PSKGQELLLPSP*LPQVSFSITQK Trigger: CTTCTGGGTTATCGAGAAGGAGACCTGAGGCAGCCAAGGGCTGGGCAGCAGAAGCTCTTGGCCCTTGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR GCA 72 bp | CAGCCTTCACATAACCCAGCAAGGGCCAAGAGCTTCTaGTGCCCAGCCCTTGGCTGCCTCAGGTCTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: QPSHNPARAKSF*CPALGCLRSPS Trigger: AGAAGGAGACCTGAGGCAGCCAAGGGCTGGGCAGCAGAAGCTCTTGGCCCTTGCTGGGTTATGTGAAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR TCA 72 bp | GGTGGGCACTGTACCCCCAAGCAAGTTCTGCTGAGCTaGACAGAGATCAGTCCAGCCTTCTCTTCTGACCCC | + |
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Preference number: 3 (lower is better) Translates to: GGHCTPKQVLLS*TEISPAFSSDP Trigger: GGGGTCAGAAGAGAAGGCTGGACTGATCTCTGTTCAGCTCAGCAGAACTTGCTTGGGGGTACAGTGCCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | ACCTGGCCTTACTTATCCTGGGCAGAATGGTGGTGGTaGGCACTGTACCCCCAAGCAAGTTCTGCTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: TWPYLSWAEWWW*ALYPQASSAEL Trigger: CAGCTCAGCAGAACTTGCTTGGGGGTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | CAGACCTGGCCTTACTTATCCTGGGCAGAATGGTGGTaGTGGGCACTGTACCCCCAAGCAAGTTCTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: QTWPYLSWAEWW*WALYPQASSAE Trigger: CTCAGCAGAACTTGCTTGGGGGTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | GCTCAGACCTGGCCTTACTTATCCTGGGCAGAATGGTaGTGGTGGGCACTGTACCCCCAAGCAAGTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: AQTWPYLSWAEW*WWALYPQASSA Trigger: AGCAGAACTTGCTTGGGGGTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | CCAGCTCAGACCTGGCCTTACTTATCCTGGGCAGAATaGTGGTGGTGGGCACTGTACCCCCAAGCAAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PAQTWPYLSWAE*WWWALYPQASS Trigger: AGAACTTGCTTGGGGGTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR TCA 72 bp | CTCCTGTGGGCACAAAAGCACCCAGAAGCTTCAGCCTaGCACAACTCTCCCTCTGCCATGTGTGGTACATCC | + |
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Preference number: 3 (lower is better) Translates to: LLWAQKHPEASA*HNSPSAMCGTS Trigger: GGATGTACCACACATGGCAGAGGGAGAGTTGTGTCAGGCTGAAGCTTCTGGGTGCTTTTGTGCCCACAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR TCA 72 bp | GCTGAGCTGAACAGAGATCAGTCCAGCCTTCTCTTCTaGCCCCATGGTCTGAAGGCCATGAGCATCCCACAG | + |
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Preference number: 3 (lower is better) Translates to: AELNRDQSSLLF*PHGLKAMSIPQ Trigger: CTGTGGGATGCTCATGGCCTTCAGACCATGGGGTCAGAAGAGAAGGCTGGACTGATCTCTGTTCAGCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTGTTGTAAACAAGTTCTaGCCAAGCCAATCCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: CQWRKWKMAPAQPSQATSVVNKF*PSQSLP Trigger: AGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAAC...ACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
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| 3UTR GCA 72 bp | CCTTGCCAACCATGTTTACTTCTACCAGCCATACCTTaGATGAATCTCAGCTGGCCCATGAGCCCCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PCQPCLLLPAIP*MNLSWPMSPSL Trigger: CAGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGGTAGAAGTAAACATGGTTGGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | GAACAGAGATCAGTCCAGCCTTCTCTTCTGACCCCATaGTCTGAAGGCCATGAGCATCCCACAGAACACAGC | + |
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Preference number: 3 (lower is better) Translates to: EQRSVQPSLLTP*SEGHEHPTEHS Trigger: GCTGTGTTCTGTGGGATGCTCATGGCCTTCAGACCATGGGGTCAGAAGAGAAGGCTGGACTGATCTCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | CAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATaGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACT | + |
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Preference number: 3 (lower is better) Translates to: QKTEYASGGNGK*RPLNPPRRLVT Trigger: AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGTTGTAAACAAGTTCTaGCCAAGCCAATCCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SGGNGKWRPLNPPRRLVTVVNKF*PSQSLP Trigger: AGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAAC...AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTCAGGTCTCCTTCTCGATAACCCAGAAGAGCCTGACAAACGTGTACTCTCATCTACCCTGGGACTaGTCATCCAAGACAACTCAC | + |
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Preference number: 3 (lower is better) Translates to: LPQVSFSITQKSLTNVYSHLPWD*SSKTTH Trigger: GTGAGTTGTCTTGGATGACAAGTCCCAGGGTAGATG...AGAGTACACGTTTGTCAGGCTCTTCTGGGTTATCGAGAAGGAGACCTGAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | ATTTATAAACCAGCTCAGACCTGGCCTTACTTATCCTaGGCAGAATGGTGGTGGTGGGCACTGTACCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: IYKPAQTWPYLS*AEWWWWALYPQ Trigger: TTGGGGGTACAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGGTTTATAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | CCCAAGGCCAACACCGAGTACAAGACCTCTCTCCCATaGCATTTGGTACCACTACAACAGCTCAGTTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: PKANTEYKTSLP*HLVPLQQLSSK Trigger: TTTGGAACTGAGCTGTTGTAGTGGTACCAAATGCCATGGGAGAGAGGTCTTGTACTCGGTGTTGGCCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | TTACTTCTACCAGCCATACCTTGCATGAATCTCAGCTaGCCCATGAGCCCCTCCCTGTTTTTAGCCTCACTC | + |
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Preference number: 3 (lower is better) Translates to: LLLPAIPCMNLS*PMSPSLFLASL Trigger: GAGTGAGGCTAAAAACAGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGGTAGAAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR CCA 72 bp | AAATCCCCTAGGACGGGAGTTGTAGTGGAACTGTCATaGGATGTTAGAATCCAACCTTGGTCCACTAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KSPRTGVVVELS*DVRIQPWSTRG Trigger: TCCTCTAGTGGACCAAGGTTGGATTCTAACATCCCATGACAGTTCCACTACAACTCCCGTCCTAGGGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR TCA 72 bp | GCTACTAATACACACCTGCACCAACTCTTTGACTTCTaGTTCTTACCAACCTGGCTTCCGTGGTGTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: ATNTHLHQLFDF*FLPTWLPWCSC Trigger: ACAGGAACACCACGGAAGCCAGGTTGGTAAGAATCAGAAGTCAAAGAGTTGGTGCAGGTGTGTATTAGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| 3UTR GCA 72 bp | CCTAATAGGCTGGGATTAGAGACCACACTAATTACATaGGCATCTACCCTGGGACTTGTCATCCAAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PNRLGLETTLIT*ASTLGLVIQDN Trigger: GTTGTCTTGGATGACAAGTCCCAGGGTAGATGCGCATGTAATTAGTGTGGTCTCTAATCCCAGCCTATTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR GCA 72 bp | GGAGCAGCTAGTATTCTAACCCAGAGCCAACACTTCTaGTTTAAAGCTCACCTTATCTCTGGGTCCCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: GAASILTQSQHF*FKAHLISGSLT Trigger: AGTAAGGGACCCAGAGATAAGGTGAGCTTTAAAGCAGAAGTGTTGGCTCTGGGTTAGAATACTAGCTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR CCA 72 bp | CATCAGGTAACATCTATTTATAAACCAGCTCAGACCTaGCCTTACTTATCCTGGGCAGAATGGTGGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HQVTSIYKPAQT*PYLSWAEWWWW Trigger: CCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGGTTTATAAATAGATGTTACCTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR TCA 72 bp | CTTACCAACCTGGCTTCCGTGGTGTTCCTGTCTTTGTaGACATGTGTGAGCATTTCTACTGGTAGTTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LTNLASVVFLSL*TCVSISTGSST Trigger: TGTAGAACTACCAGTAGAAATGCTCACACATGTTCACAAAGACAGGAACACCACGGAAGCCAGGTTGGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR CCA 72 bp | TGTGTGAGCATTTCTACTGGTAGTTCTACAGAACAGTaGCAGGTCAGCTTTACTGGTGACAGCAGAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: CVSISTGSSTEQ*QVSFTGDSRDL Trigger: AAGATCTCTGCTGTCACCAGTAAAGCTGACCTGCCACTGTTCTGTAGAACTACCAGTAGAAATGCTCACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR GCA 72 bp | ATTTGGTACCACTACAACAGCTCAGTTCCAAACGTCTaGAGGCTATGCTCCATTTCTTCACGTTCACCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: IWYHYNSSVPNV*RLCSISSRSPF Trigger: AAAAGGTGAACGTGAAGAAATGGAGCATAGCCTGCAGACGTTTGGAACTGAGCTGTTGTAGTGGTACCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAACACAAGTTTACTCTTCCTTGCCAACCATGTTTACTTCTACCAGCCATACCCTTGTCTCATTGTATTaGCTCAGGATTCCAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: QTQVYSSLPTMFTSTSHTLVSLY*LRIPAP Trigger: TGGTGCTGGAATCCTGAGCAAATACAATGAGACAAG...GGTATGGCTGGTAGAAGTAAACATGGTTGGCAAGGAAGAGTAAACTTGTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR TCA 72 bp | CTCCTAAGCATGCTTCTTGGTTTTCCTAGCCAGTTTTaGGAGACTTGTCTCATTGTATTTGCTCAGGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSMLLGFPSQF*ETCLIVFAQDS Trigger: GGAATCCTGAGCAAATACAATGAGACAAGTCTCTCAAAACTGGCTAGGAAAACCAAGAAGCATGCTTAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCAGGCTTTCCTTTCCTaGGCAAGGCGGCTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEYASGGNGKWRPLNPPRQAFLS*ARRLRA Trigger: CGCCCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTG...CCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTGGGCTCAAATTTACCTaGAGGACAGGGAGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQWRKWKMAPAQPSQATSGLKFT*RTGRGR Trigger: CCTTCCCCTCCCTGTCCTCCAGGTAAATTTGAGCCC...ACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAAAGCATCCGTAGCTTaGACAAGCCTCCTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CQWRKWKMAPAQPSQATSKASVA*TSLLPM Trigger: CATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTT...ACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGTCTTCCTCCAGGATaGACAGGCACACTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VNKFLPSQSLPRHGAQGRCLPPG*TGTLCQ Trigger: CTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACA...GCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCAGGCTTTCCTTTCCTaGGCAAGGCGGCTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YKRLNMPVAEMENGARSTQAFLS*ARRLRA Trigger: CGCCCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTG...GGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGTGGACAGGCACACTGTaGCAGAAGGATACACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQVLAKPIPSSSWSPGPLWTGTL*QKDTRL Trigger: CAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCA...CAGCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTTGGACAGGCACACTGTaGCAGAAGGATACACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGGNGKWRPLNPPRRLVTWTGTL*QKDTRL Trigger: CAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCA...AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTACAAAGCCAAAAGGGTaGTCCTTCCTCCAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGGNGKWRPLNPPRRLVTTKPKG*SFLQAF Trigger: GAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGT...AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCTGTCTTCCTCCAGGATaGACAGGCACACTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVNKFLPSQSLPRHGAQGCLPPG*TGTLCQ Trigger: CTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACA...GCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | AAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGTACGGAGCGACTTAGGATACACGTTTGGATaGAACAGTGGGGGCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KWRPLNPPRRLVTVRSDLGYTFG*NSGGSN Trigger: ATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCC...TAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGGATACACGTTTGGATaGAACAGTGGGGGCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGGNGKWRPLNPPRRLVTGYTFG*NSGGSN Trigger: ATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCC...AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCTGGACAGGCACACTGTaGCAGAAGGATACACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTEYASGGNGKWRPLNPPWTGTL*QKDTRL Trigger: CAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCA...GGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGGAAGGAGGGACAGTGTGGTTCTGTCACACAGCCAGATGGAAGCCAGAGCAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGKEGQCGSVTQPDGSQSRRIHV*MKQWGL Trigger: GAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCT...GCTCTGGCTTCCATCTGGCTGTGTGACAGAACCACACTGTCCCTCCTTCCCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGGNGKWRPLNPPRRLVTRRIHV*MKQWGL Trigger: GAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCT...AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGTTTGATGGTGATAGCTaGCCTCCAGTCCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEYASGGNGKWRPLNPPRFDGDS*PPVLVF Trigger: GAAGACAAGGACTGGAGGCCAGCTATCACCATCAAA...CCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGGAAGGAGGGACAGTGTGGTTCTGTCACACAGCCAGATGGAAGCCAGAGCTTTGATGGTGATAGCTaGCCTCCAGTCCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGKEGQCGSVTQPDGSQSFDGDS*PPVLVF Trigger: GAAGACAAGGACTGGAGGCCAGCTATCACCATCAAA...GCTCTGGCTTCCATCTGGCTGTGTGACAGAACCACACTGTCCCTCCTTCCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR CCA 90 bp | AAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGTACGGAGCGACTTATTTGATGGTGATAGCTaGCCTCCAGTCCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRPLNPPRRLVTVRSDLFDGDS*PPVLVF Trigger: GAAGACAAGGACTGGAGGCCAGCTATCACCATCAAA...TAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGGGACAGTGTGGTTCTGTCACACAGCCAGATGGAAGCCAGAGCTCTGGGCCTCTGCTTGAGCTaGGTCTTGAATATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRDSVVLSHSQMEARALGLCLS*VLNIWF Trigger: GAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCC...CAGAGCTCTGGCTTCCATCTGGCTGTGTGACAGAACCACACTGTCCCTCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGGGCCTCTGCTTGAGCTaGGTCTTGAATATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEYASGGNGKWRPLNPPRGLCLS*VLNIWF Trigger: GAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCC...CCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| 3UTR CAA 72 bp | TCCTTGCCAACCATGTTTACTTCTACCAGCCATACCTaGCATGAATCTCAGCTGGCCCATGAGCCCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPTMFTSTSHT*HESQLAHEPLP Trigger: AGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGGTAGAAGTAAACATGGTTGGCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTTTTACATTTTGGTGGTaGGGACGGATAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CQWRKWKMAPAQPSQATSFTFWW*GRIVIF Trigger: AAAGATGACTATCCGTCCTCACCACCAAAATGTAAA...ACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTCACCTTATCTCTGGGTCCCTTACTCATCAGTGATTCTCAACACAAGTCTCAGGCTTTCCTTTCCTaGGCAAGGCGGCTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLTLSLGPLLISDSQHKSQAFLS*ARRLRA Trigger: CGCCCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTG...AGACTTGTGTTGAGAATCACTGATGAGTAAGGGACCCAGAGATAAGGTGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACAAACTTCTTCGCTTGTaGTCGGACCCTTTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QWRKWKMAPAQPSQATSNKLLRL*SDPFLI Trigger: TATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTT...GTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTAAAGCATCCGTAGCTTaGACAAGCCTCCTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QKTEYASGGNGKWRPLNPKASVA*TSLLPM Trigger: CATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTT...AGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGGGATACACGTTTGGATaGAACAGTGGGGGCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GCKQVLAKPIPSSSWSPGGYTFG*NSGGSN Trigger: ATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCC...CCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR GCA 90 bp | TTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCAGGCTTTCCTTTCCTaGGCAAGGCGGCTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDLQKVVNKFLPSQSLPRQAFLS*ARRLRA Trigger: CGCCCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTG...ACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAGGGACAGTGTGGTTCTGTCACACAGCCAGATGGAAGCCAGAGCTCTGTCATCAGGTTCATTGTaGCATCAGGGTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRDSVVLSHSQMEARALSSGSL*HQGSLL Trigger: CAACAAAGAACCCTGATGGCACAATGAACCTGATGA...CAGAGCTCTGGCTTCCATCTGGCTGTGTGACAGAACCACACTGTCCCTCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTAAACTTCTTCGCTTGTaGTCGGACCCTTTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SGGNGKWRPLNPPRRLVTKLLRL*SDPFLI Trigger: TATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTT...AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR GCA 90 bp | AAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGTACGGAGCGACTTAAAACTTCTTCGCTTGTaGTCGGACCCTTTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: KWRPLNPPRRLVTVRSDLKLLRL*SDPFLI Trigger: TATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTT...TAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTACAAAGCCAAAAGGGTaGTCCTTCCTCCAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKTEYASGGNGKWRPLNPTKPKG*SFLQAF Trigger: GAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGT...AGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTATCAGGGTTCTTTGTTaGGACAGCTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGGNGKWRPLNPPRRLVTIRVLC*DSYKAK Trigger: TTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGAT...AGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCTGTCTTCCTCCAGGATaGACAGGCACACTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKGCKQVLAKPIPSSSWSCLPPG*TGTLCQ Trigger: CTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACA...GCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | TACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCAAAGCATCCGTAGCTTaGACAAGCCTCCTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YKRLNMPVAEMENGARSTKASVA*TSLLPM Trigger: CATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTT...GGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGTTTACATTTTGGTGGTaGGGACGGATAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQVLAKPIPSSSWSPGPLFTFWW*GRIVIF Trigger: AAAGATGACTATCCGTCCTCACCACCAAAATGTAAA...CAGCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAAACTTCTTCGCTTGTaGTCGGACCCTTTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: KTEYASGGNGKWRPLNPPKLLRL*SDPFLI Trigger: TATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTT...GGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | AAATACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCATGTCTTCCTCCAGGATaGACAGGCACACTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYKRLNMPVAEMENGARSCLPPG*TGTLCQ Trigger: CTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACA...TGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAACACAAGTCTGCTCCAGCAGGCATCTTTCCAATTCTGGGCTCTTCTTTGGTAGTGCTGGGAAGTaGACTGCAGGCTCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTQVCSSRHLSNSGLFFGSAGK*TAGSLH Trigger: GTGCAAAGAGCCTGCAGTCCACTTCCCAGCACTACC...AAAGAAGAGCCCAGAATTGGAAAGATGCCTGCTGGAGCAGACTTGTGTTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR CAA 72 bp | AAAGGAAGTGGTGCAGGATGGAAATGCTGGCCAACTTaGGATCTGAGGCTCATAAGCAACAGCCCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGSGAGWKCWPT*DLRLISNSPGF Trigger: GAAACCTGGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCATTTCCATCCTGCACCACTTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR GCA 90 bp | ACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTCAGGCTTTCCTTTCCTaGGCAAGGCGGCTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TSNCTERLRSAKGCKQVLQAFLS*ARRLRA Trigger: CGCCCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTG...AAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCTCATCAGGTTCATTGTaGCATCAGGGTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVNKFLPSQSLPRHGAQGSSGSL*HQGSLL Trigger: CAACAAAGAACCCTGATGGCACAATGAACCTGATGA...GCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | CGCCATATAAACACAAAGGAAGTGGTGCAGGATGGAAATGCTGGCCAACTTTGGTGGACAGGCACACTGTaGCAGAAGGATACACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RHINTKEVVQDGNAGQLWWTGTL*QKDTRL Trigger: CAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCA...CCAAAGTTGGCCAGCATTTCCATCCTGCACCACTTCCTTTGTGTTTATATGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR CCA 90 bp | TGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCATGTCTTCCTCCAGGATaGACAGGCACACTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTERLRSAKGCKQVLAKPCLPPG*TGTLCQ Trigger: CTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACA...TGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAACACAAGTCTGCTCCAGCAGGCATCTTTCCAATTCTGGGCTCTTCTTTAAGCACTCACAGACATaGCTCCCAAAGGGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTQVCSSRHLSNSGLFFKHSQT*LPKGGG Trigger: ACCACCACCCTTTGGGAGCCATGTCTGTGAGTGCTT...AAAGAAGAGCCCAGAATTGGAAAGATGCCTGCTGGAGCAGACTTGTGTTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR CAA 72 bp | AGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTaGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDLDLQKVVNKF*PSQSLPRHGAQ Trigger: CTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTACTGGTAGTTCTACAGAACAGTGGCAGGTCAGCTTTACTGGTGACAGCAAAAGCATCCGTAGCTTaGACAAGCCTCCTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLVVLQNSGRSALLVTAKASVA*TSLLPM Trigger: CATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTT...TGCTGTCACCAGTAAAGCTGACCTGCCACTGTTCTGTAGAACTACCAGTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCGGATACACGTTTGGATaGAACAGTGGGGGCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AKGCKQVLAKPIPSSSWSGYTFG*NSGGSN Trigger: ATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCC...GCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAACACCGAGTACAAGACCTCTCTCCCATGGCATTTGGTACCACTACAACACTTACATTTTGGTGGTaGGGACGGATAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQHRVQDLSPMAFGTTTTLTFWW*GRIVIF Trigger: AAAGATGACTATCCGTCCTCACCACCAAAATGTAAG...TGTTGTAGTGGTACCAAATGCCATGGGAGAGAGGTCTTGTACTCGGTGTTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTACTGGTAGTTCTACAGAACAGTGGCAGGTCAGCTTTACTGGTGACAGCAACAAAGCCAAAAGGGTaGTCCTTCCTCCAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLVVLQNSGRSALLVTATKPKG*SFLQAF Trigger: GAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGT...TGCTGTCACCAGTAAAGCTGACCTGCCACTGTTCTGTAGAACTACCAGTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKGCKQVLAKPIPSSSWSRRIHV*MKQWGL Trigger: GAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCT...GCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGTGTCTTCCTCCAGGATaGACAGGCACACTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NCTERLRSAKGCKQVLAKCLPPG*TGTLCQ Trigger: CTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACA...CTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCGGCCTCTGCTTGAGCTaGGTCTTGAATATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKGCKQVLAKPIPSSSWSGLCLS*VLNIWF Trigger: GAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCC...GCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | AAATACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAGGGAAGGAATACTTTTaGAGGCAGATGCTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KYKRLNMPVAEMENGARSGKEYF*RQMLSP Trigger: TGGGGACAGCATCTGCCTCCAAAAGTATTCCTTCCC...TGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | GTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAAAAAGCATCCGTAGCTTaGACAAGCCTCCTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VRSDLDLQKVVNKFLPSQKASVA*TSLLPM Trigger: CATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTT...TTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTGGACAGGCACACTGTaGCAGAAGGATACACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVTVRSDLDLQKVVNKWTGTL*QKDTRL Trigger: CAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCA...CTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAACAAAGCCAAAAGGGTaGTCCTTCCTCCAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATSNCTERLRSAKGCKQTKPKG*SFLQAF Trigger: GAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGT...TTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
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| CDS-3UTR CCA 90 bp | AAATACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYKRLNMPVAEMENGARSRRIHV*MKQWGL Trigger: GAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCT...TGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR GCA 90 bp | ACCAACTCTTTGACTTCTGATTCTTACCAACCTGGCTTCCGTGGTGTTCCTGTCTCATCAGGTTCATTGTaGCATCAGGGTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TNSLTSDSYQPGFRGVPVSSGSL*HQGSLL Trigger: CAACAAAGAACCCTGATGGCACAATGAACCTGATGA...GACAGGAACACCACGGAAGCCAGGTTGGTAAGAATCAGAAGTCAAAGAGTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR GCA 90 bp | GCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTTGGACAGGCACACTGTaGCAGAAGGATACACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATSNCTERLRSAKGCKQVWTGTL*QKDTRL Trigger: CAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCA...AACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | TTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTACAAAGCCAAAAGGGTaGTCCTTCCTCCAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDLQKVVNKFLPSQSLPRTKPKG*SFLQAF Trigger: GAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGT...ACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCAGGCTATGCTCCATTTCTTCACGTTCACCTTTTTCCTCCTAAGCATGATCAGGGTTCTTTGTTaGGACAGCTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLQAMLHFFTFTFFLLSMIRVLC*DSYKAK Trigger: TTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGAT...CATGCTTAGGAGGAAAAAGGTGAACGTGAAGAAATGGAGCATAGCCTGCAGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR CCA 90 bp | CGCCATATAAACACAAAGGAAGTGGTGCAGGATGGAAATGCTGGCCAACTTTGGATCAGGGTTCTTTGTTaGGACAGCTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RHINTKEVVQDGNAGQLWIRVLC*DSYKAK Trigger: TTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGAT...CCAAAGTTGGCCAGCATTTCCATCCTGCACCACTTCCTTTGTGTTTATATGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLVTVRSDLDLQKVVNKRRIHV*MKQWGL Trigger: GAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCT...CTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CCA 90 bp | CAGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAATTTGATGGTGATAGCTaGCCTCCAGTCCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATSNCTERLRSAKGCKQFDGDS*PPVLVF Trigger: GAAGACAAGGACTGGAGGCCAGCTATCACCATCAAA...TTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | TGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCATTTGATGGTGATAGCTaGCCTCCAGTCCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTERLRSAKGCKQVLAKPFDGDS*PPVLVF Trigger: GAAGACAAGGACTGGAGGCCAGCTATCACCATCAAA...TGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGGGCCTCTGCTTGAGCTaGGTCTTGAATATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLVTVRSDLDLQKVVNKGLCLS*VLNIWF Trigger: GAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCC...CTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGGCCTCTGCTTGAGCTaGGTCTTGAATATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATSNCTERLRSAKGCKQGLCLS*VLNIWF Trigger: GAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCC...TTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| 3UTR CAA 72 bp | CACCATTTTGCTGTCTGGGGGTTTAGATGCTCCATCTaGCTTCCCTTTAATCTCAATTATTTCCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HHFAVWGFRCSI*LPFNLNYFPGC Trigger: GCAGCCTGGGAAATAATTGAGATTAAAGGGAAGCAAGATGGAGCATCTAAACCCCCAGACAGCAAAATGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR CCA 90 bp | AAATACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAATCAGGGTTCTTTGTTaGGACAGCTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KYKRLNMPVAEMENGARSIRVLC*DSYKAK Trigger: TTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGAT...TGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NCTERLRSAKGCKQVLAKRRIHV*MKQWGL Trigger: GAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCT...CTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGTTTGATGGTGATAGCTaGCCTCCAGTCCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCTERLRSAKGCKQVLAKFDGDS*PPVLVF Trigger: GAAGACAAGGACTGGAGGCCAGCTATCACCATCAAA...CTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | AACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGGGCCTCTGCTTGAGCTaGGTCTTGAATATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCTERLRSAKGCKQVLAKGLCLS*VLNIWF Trigger: GAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCC...CTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| 3UTR CAA 72 bp | TTCCTAGCCAGTTTTGAGAGACTTGTCTCATTGTATTaGCTCAGGATTCCAGCACCACACGAAAGGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLASFERLVSLY*LRIPAPHERKE Trigger: CTCTTTCCTTTCGTGTGGTGCTGGAATCCTGAGCAAATACAATGAGACAAGTCTCTCAAAACTGGCTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| 3UTR CAA 72 bp | TTGGTTTTCCTAGCCAGTTTTGAGAGACTTGTCTCATaGTATTTGCTCAGGATTCCAGCACCACACGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVFLASFERLVS*YLLRIPAPHER Trigger: CCTTTCGTGTGGTGCTGGAATCCTGAGCAAATACAATGAGACAAGTCTCTCAAAACTGGCTAGGAAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR GCA 90 bp | GTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCATCAGGTTCATTGTaGCATCAGGGTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VRSDLDLQKVVNKFLPSQSSGSL*HQGSLL Trigger: CAACAAAGAACCCTGATGGCACAATGAACCTGATGA...TTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTCATCAGGTTCATTGTaGCATCAGGGTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVTVRSDLDLQKVVNKSSGSL*HQGSLL Trigger: CAACAAAGAACCCTGATGGCACAATGAACCTGATGA...CTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | GTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAAAAACTTCTTCGCTTGTaGTCGGACCCTTTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VRSDLDLQKVVNKFLPSQKLLRL*SDPFLI Trigger: TATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTT...TTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAATCAGGGTTCTTTGTTaGGACAGCTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QATSNCTERLRSAKGCKQIRVLC*DSYKAK Trigger: TTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGAT...TTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR CCA 90 bp | GTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAAATCAGGGTTCTTTGTTaGGACAGCTACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRSDLDLQKVVNKFLPSQIRVLC*DSYKAK Trigger: TTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGAT...TTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR TCA 90 bp | AGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTTACATTTTGGTGGTaGGGACGGATAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRLVTVRSDLDLQKVVNKFTFWW*GRIVIF Trigger: AAAGATGACTATCCGTCCTCACCACCAAAATGTAAA...CTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | GCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTTCATCAGGTTCATTGTaGCATCAGGGTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATSNCTERLRSAKGCKQVSSGSL*HQGSLL Trigger: CAACAAAGAACCCTGATGGCACAATGAACCTGATGA...AACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR GCA 90 bp | TTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTAAACTTCTTCGCTTGTaGTCGGACCCTTTTCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LDLQKVVNKFLPSQSLPRKLLRL*SDPFLI Trigger: TATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTT...ACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR TCA 90 bp | GCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTTTTACATTTTGGTGGTaGGGACGGATAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATSNCTERLRSAKGCKQVFTFWW*GRIVIF Trigger: AAAGATGACTATCCGTCCTCACCACCAAAATGTAAA...AACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTTTTACATTTTGGTGGTaGGGACGGATAGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSNCTERLRSAKGCKQVLFTFWW*GRIVIF Trigger: AAAGATGACTATCCGTCCTCACCACCAAAATGTAAA...AAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| 3UTR CAA 72 bp | TTAACTTGTACTTTGCAAACACAAGTTTACTCTTCCTaGCCAACCATGTTTACTTCTACCAGCCATACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTCTLQTQVYSS*PTMFTSTSHTL Trigger: CAAGGTATGGCTGGTAGAAGTAAACATGGTTGGCAAGGAAGAGTAAACTTGTGTTTGCAAAGTACAAGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR CAA 90 bp | AAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGTACGGAGCGACTTAGCTGGCCTCCAGTCCTaGTCTTCCTCCAGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KWRPLNPPRRLVTVRSDLAGLQS*SSSRMD Trigger: GTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGC...TAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGGCTGGCCTCCAGTCCTaGTCTTCCTCCAGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TEYASGGNGKWRPLNPPRAGLQS*SSSRMD Trigger: GTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGC...CCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | GTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCGCTGGCCTCCAGTCCTaGTCTTCCTCCAGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VNKFLPSQSLPRHGAQGRAGLQS*SSSRMD Trigger: GTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGC...GCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS CCA 90 bp | GTGCCATCAGGGTTCTTTGTTGGGACAGCTACAAAGCCAAAAGGGTaGTCCTTCCTCCAGGCTTTCCTTTCCTGCGCAAGGCGGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSGFFVGTATKPKG*SFLQAFLSCARRLR Trigger: CCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000049911.16 ENSMUST00000172587.8 ENSMUST00000172618.8 ENSMUST00000172868.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTTGCCATCAGGGTTCTTaGTTGGGACAGCTACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CQWRKWKMAPAQPSQATSCHQGS*LGQLQS Trigger: GCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCA...ACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS-3UTR CAA 90 bp | AAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGTACGGAGCGACTTAGGCAAACTTCTTCGCTaGTGCTCGGACCCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KWRPLNPPRRLVTVRSDLGKLLR*CSDPFL Trigger: GAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTTGCC...TAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGGGCAAACTTCTTCGCTaGTGCTCGGACCCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQVLAKPIPSSSWSPGPLGKLLR*CSDPFL Trigger: GAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTTGCC...CAGCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGGGCAAACTTCTTCGCTaGTGCTCGGACCCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TEYASGGNGKWRPLNPPRGKLLR*CSDPFL Trigger: GAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTTGCC...CCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGGAAGGAGGGACAGTGTGGTTCTGTCACACAGCCAGATGGAAGCCAGAGCTGCCATCAGGGTTCTTaGTTGGGACAGCTACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGKEGQCGSVTQPDGSQSCHQGS*LGQLQS Trigger: GCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCA...GCTCTGGCTTCCATCTGGCTGTGTGACAGAACCACACTGTCCCTCCTTCCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACAAAAGCATCCGTAGCTaGAACAAGCCTCCTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QWRKWKMAPAQPSQATSNKSIRS*NKPPSH Trigger: ATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTT...GTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
||
| CDS TCA 90 bp | TCCAGGATGGACAGGCACACTGTGCCAGAAGGATACACGTTTGGATaGAACAGTGGGGGCTCAAATTTACCTGGAGGACAGGGAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRMDRHTVPEGYTFG*NSGGSNLPGGQGGE Trigger: TTCCCCTCCCTGTCCTCCAGGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
||
| CDS CCA 90 bp | TTCCTCCAGGATGGACAGGCACACTGTGCCAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTCAAATTTACCTGGAGGACAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLQDGQAHCARRIHV*MKQWGLKFTWRTGR Trigger: CCTCCCTGTCCTCCAGGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCAGACCTGGCCTTACTTATCCTGGGCAGAATGGTGGTGGTGGGCACTGAGTTCATCAGGTTCATaGTGCCATCAGGGTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PAQTWPYLSWAEWWWWALSSSGS*CHQGSL Trigger: CAAAGAACCCTGATGGCACAATGAACCTGATGAACT...CAGTGCCCACCACCACCATTCTGCCCAGGATAAGTAAGGCCAGGTCTGAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR CAA 90 bp | GTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGTGTAGGCCTCTGCTaGAGCTGGGTCTTGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: VNKFLPSQSLPRHGAQGRCVGLC*SWVLNI Trigger: AATATTCAAGACCCAGCTCAAGCAGAGGCCTACACA...GCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGTGTGTAGGCCTCTGCTaGAGCTGGGTCTTGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: KQVLAKPIPSSSWSPGPLCVGLC*SWVLNI Trigger: AATATTCAAGACCCAGCTCAAGCAGAGGCCTACACA...CAGCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | AAATGGCGCCCGCTCAACCCTCCCAGGCGACTAGTAACTGTACGGAGCGACTTATGTGTAGGCCTCTGCTaGAGCTGGGTCTTGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: KWRPLNPPRRLVTVRSDLCVGLC*SWVLNI Trigger: AATATTCAAGACCCAGCTCAAGCAGAGGCCTACACA...TAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGGGCAAACTTCTTCGCTaGTGCTCGGACCCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCKQVLAKPIPSSSWSPGGKLLR*CSDPFL Trigger: GAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTTGCC...CCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS CCA 90 bp | GGACAGGCACACTGTGCCAGAAGGATACACGTTTGGATGAAACAGTaGGGGCTCAAATTTACCTGGAGGACAGGGAGGGGAAGGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: GQAHCARRIHVWMKQ*GLKFTWRTGRGRNT Trigger: AGTATTCCTTCCCCTCCCTGTCCTCCAGGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCATACCTTGCATGAATCTCAGCTGGCCCATGAGCCCCTCCCTGTTTTTATGCCATCAGGGTTCTTaGTTGGGACAGCTACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAIPCMNLSWPMSPSLFLCHQGS*LGQLQS Trigger: GCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCA...TAAAAACAGGGAGGGGCTCATGGGCCAGCTGAGATTCATGCAAGGTATGGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
||
| CDS-3UTR CAA 90 bp | GTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCAGTTCATCAGGTTCATaGTGCCATCAGGGTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VNKFLPSQSLPRHGAQGRSSSGS*CHQGSL Trigger: CAAAGAACCCTGATGGCACAATGAACCTGATGAACT...GCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGTGTTTTGGCAGTAAATaGTGTAGGCCTCTGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TEYASGGNGKWRPLNPPRCFGSK*CRPLLE Trigger: CTCAAGCAGAGGCCTACACAATTTACTGCCAAAACA...CCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
||
| CDS-3UTR CAA 90 bp | GTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGCCGCTGTTTTGGCAGTAAATaGTGTAGGCCTCTGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VNKFLPSQSLPRHGAQGRCFGSK*CRPLLE Trigger: CTCAAGCAGAGGCCTACACAATTTACTGCCAAAACA...GCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
||
| CDS CCA 90 bp | GCACTCCCAGTTCATCAGGTTCATTGTGCCATCAGGGTTCTTTGTTaGGACAGCTACAAAGCCAAAAGGGTGGTCCTTCCTCCAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALPVHQVHCAIRVLC*DSYKAKRVVLPPGF Trigger: AAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCACAATGAACCTGATGAACTGGGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000049911.16 ENSMUST00000172587.8 ENSMUST00000172618.8 ENSMUST00000172868.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGAAAAGCATCCGTAGCTaGAACAAGCCTCCTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCKQVLAKPIPSSSWSPGKSIRS*NKPPSH Trigger: ATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTT...CCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
||
| CDS-3UTR CAA 90 bp | GTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAAGCTGGCCTCCAGTCCTaGTCTTCCTCCAGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRSDLDLQKVVNKFLPSQAGLQS*SSSRMD Trigger: GTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGC...TTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | TGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAGCTGGCCTCCAGTCCTaGTCTTCCTCCAGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: CTERLRSAKGCKQVLAKPAGLQS*SSSRMD Trigger: GTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGC...TGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | GGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGTGTGTAGGCCTCTGCTaGAGCTGGGTCTTGAATATT | + |
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Preference number: 5 (lower is better) Translates to: GCKQVLAKPIPSSSWSPGCVGLC*SWVLNI Trigger: AATATTCAAGACCCAGCTCAAGCAGAGGCCTACACA...CCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS TCA 90 bp | TCCAGGATGGACAGGCACACTGTGCCAGAAGGATACACGTTTGGATaGAACAGTGGGGGCTCAAATTTACATTTTGGTGGTGAGGACGGA | + |
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Preference number: 5 (lower is better) Translates to: SRMDRHTVPEGYTFG*NSGGSNLHFGGEDG Trigger: TCCGTCCTCACCACCAAAATGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
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| CDS-3UTR CAA 90 bp | TTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTGCTGGCCTCCAGTCCTaGTCTTCCTCCAGGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: LDLQKVVNKFLPSQSLPRAGLQS*SSSRMD Trigger: GTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGC...ACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | GGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCCCAGGGTGTTTTGGCAGTAAATaGTGTAGGCCTCTGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: GCKQVLAKPIPSSSWSPGCFGSK*CRPLLE Trigger: CTCAAGCAGAGGCCTACACAATTTACTGCCAAAACA...CCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | ACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAACCCTCCCAGGATATTCCACTCTGTTTaGGCAGTAAATTGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: TEYASGGNGKWRPLNPPRIFHSV*AVNCVG Trigger: GCCTACACAATTTACTGCCAAAACAGAGTGGAATAT...CCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | ACGAGGGTAGGGAAGGAGGGACAGTGTGGTTCTGTCACACAGCCAGATGGAAGCATATTCCACTCTGTTTaGGCAGTAAATTGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: TRVGKEGQCGSVTQPDGSIFHSV*AVNCVG Trigger: GCCTACACAATTTACTGCCAAAACAGAGTGGAATAT...GCTTCCATCTGGCTGTGTGACAGAACCACACTGTCCCTCCTTCCCTACCCTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
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| CDS-3UTR CAA 90 bp | GCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCTGCCATCAGGGTTCTTaGTTGGGACAGCTACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: AKGCKQVLAKPIPSSSWSCHQGS*LGQLQS Trigger: GCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCA...GCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
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| CDS-3UTR CAA 90 bp | TGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAGGCAAACTTCTTCGCTaGTGCTCGGACCCTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CTERLRSAKGCKQVLAKPGKLLR*CSDPFL Trigger: GAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTTGCC...TGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | CAGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAATGCCATCAGGGTTCTTaGTTGGGACAGCTACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: QATSNCTERLRSAKGCKQCHQGS*LGQLQS Trigger: GCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCA...TTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
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| CDS-3UTR CAA 90 bp | CGCCATATAAACACAAAGGAAGTGGTGCAGGATGGAAATGCTGGCCAACTTTGGAGTTCATCAGGTTCATaGTGCCATCAGGGTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: RHINTKEVVQDGNAGQLWSSSGS*CHQGSL Trigger: CAAAGAACCCTGATGGCACAATGAACCTGATGAACT...CCAAAGTTGGCCAGCATTTCCATCCTGCACCACTTCCTTTGTGTTTATATGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
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| CDS-3UTR CAA 90 bp | AAATACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAAAAAGCATCCGTAGCTaGAACAAGCCTCCTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: KYKRLNMPVAEMENGARSKSIRS*NKPPSH Trigger: ATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTT...TGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 |
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| CDS-3UTR CAA 90 bp | GCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCTGTTTTGGCAGTAAATaGTGTAGGCCTCTGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: AKGCKQVLAKPIPSSSWSCFGSK*CRPLLE Trigger: CTCAAGCAGAGGCCTACACAATTTACTGCCAAAACA...GCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | ACAAAAGAACTCAGGCAGACAAGGAAATCCCAAACAGAACAGGCAAGACTCCATAAAAGCATCCGTAGCTaGAACAAGCCTCCTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: TKELRQTRKSQTEQARLHKSIRS*NKPPSH Trigger: ATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTT...ATGGAGTCTTGCCTGTTCTGTTTGGGATTTCCTTGTCTGCCTGAGTTCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172868.8 |
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| CDS-3UTR CAA 90 bp | AGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGAGTTCATCAGGTTCATaGTGCCATCAGGGTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: RRLVTVRSDLDLQKVVNKSSSGS*CHQGSL Trigger: CAAAGAACCCTGATGGCACAATGAACCTGATGAACT...CTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
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| CDS-3UTR CAA 90 bp | TTAGATCTGCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTAAAAGCATCCGTAGCTaGAACAAGCCTCCTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LDLQKVVNKFLPSQSLPRKSIRS*NKPPSH Trigger: ATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTT...ACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 |
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| CDS-3UTR CAA 90 bp | CGCCATATAAACACAAAGGAAGTGGTGCAGGATGGAAATGCTGGCCAACTTTGGATATTCCACTCTGTTTaGGCAGTAAATTGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: RHINTKEVVQDGNAGQLWIFHSV*AVNCVG Trigger: GCCTACACAATTTACTGCCAAAACAGAGTGGAATAT...CCAAAGTTGGCCAGCATTTCCATCCTGCACCACTTCCTTTGTGTTTATATGGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049911.16 ENSMUST00000173084.8 |
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| CDS-3UTR CAA 90 bp | GCAAAAGGTTGTAAACAAGTTCTTGCCAAGCCAATCCCTTCCTCGTCATGGAGCATATTCCACTCTGTTTaGGCAGTAAATTGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: AKGCKQVLAKPIPSSSWSIFHSV*AVNCVG Trigger: GCCTACACAATTTACTGCCAAAACAGAGTGGAATAT...GCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | GCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTTGTTTTGGCAGTAAATaGTGTAGGCCTCTGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: ATSNCTERLRSAKGCKQVCFGSK*CRPLLE Trigger: CTCAAGCAGAGGCCTACACAATTTACTGCCAAAACA...AACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | AAATACAAAAGACTGAATATGCCAGTGGCGGAAATGGAAAATGGCGCCCGCTCAATATTCCACTCTGTTTaGGCAGTAAATTGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: KYKRLNMPVAEMENGARSIFHSV*AVNCVG Trigger: GCCTACACAATTTACTGCCAAAACAGAGTGGAATAT...TGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | ACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAGTTCTTTGTGTAGGCCTCTGCTaGAGCTGGGTCTTGAATATT | + |
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Preference number: 5 (lower is better) Translates to: TSNCTERLRSAKGCKQVLCVGLC*SWVLNI Trigger: AATATTCAAGACCCAGCTCAAGCAGAGGCCTACACA...AAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS-3UTR CAA 90 bp | CAGGCGACTAGTAACTGTACGGAGCGACTTAGATCTGCAAAAGGTTGTAAACAAATATTCCACTCTGTTTaGGCAGTAAATTGTGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: QATSNCTERLRSAKGCKQIFHSV*AVNCVG Trigger: GCCTACACAATTTACTGCCAAAACAGAGTGGAATAT...TTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS CCA 72 bp | GGGTTCTTTGTTGGGACAGCTACAAAGCCAAAAGGGTaGTCCTTCCTCCAGGCTTTCCTTTCCTGCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GFFVGTATKPKG*SFLQAFLSCAR Trigger: CCTTGCGCAGGAAAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTAGCTGTCCCAACAAAGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000049911.16 ENSMUST00000172587.8 ENSMUST00000172618.8 ENSMUST00000172868.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
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| CDS CAA 90 bp | CTTCCTCCAGGATGGACAGGCACACTGTGCCAGAAGGATACACGTTaGGATGAAACAGTGGGGGCTCAAATTTACCTGGAGGACAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPPGWTGTLCQKDTR*DETVGAQIYLEDRE Trigger: CTCCCTGTCCTCCAGGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
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| CDS GCA 72 bp | AGTCCTTGTCTTCCTCCAGGATGGACAGGCACACTGTaGCAGAAGGATACACGTTTGGATGAAACAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPCLPPGWTGTL*QKDTRLDETVG Trigger: CCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS CCA 72 bp | CACTGTGCCAGAAGGATACACGTTTGGATGAAACAGTaGGGGCTCAAATTTACCTGGAGGACAGGGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: HCARRIHVWMKQ*GLKFTWRTGRG Trigger: TCCCCTCCCTGTCCTCCAGGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
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| CDS CAA 72 bp | AAGATCTGTTTGATGGTGATAGCTGGCCTCCAGTCCTaGTCTTCCTCCAGGATGGACAGGCACACTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KICLMVIAGLQS*SSSRMDRHTVP Trigger: TGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGCTATCACCATCAAACAGATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 ENSMUST00000174216.8 |
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| CDS CAA 90 bp | CGCACTCCCAGTTCATCAGGTTCATTGTGCCATCAGGGTTCTTTGTaGGGACAGCTACAAAGCCAAAAGGGTGGTCCTTCCTCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTPSSSGSLCHQGSL*GQLQSQKGGPSSRL Trigger: AAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCACAATGAACCTGATGAACTGGGAGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000049911.16 ENSMUST00000172587.8 ENSMUST00000172618.8 ENSMUST00000172868.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
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| CDS CCA 72 bp | ACATGGCTCCCAAAGGGTGGTGGTAGTGCTGGGAAGTaGACTGCAGGCTCTTTGCACAACTTACATTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TWLPKGGGSAGK*TAGSLHNLHFG Trigger: ACCAAAATGTAAGTTGTGCAAAGAGCCTGCAGTCCACTTCCCAGCACTACCACCACCCTTTGGGAGCCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172587.8 ENSMUST00000172868.8 |
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| CDS CCA 72 bp | GATGGACAGGCACACTGTGCCAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTCAAATTTACCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DGQAHCARRIHV*MKQWGLKFTWR Trigger: CCTCCAGGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
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| CDS CAA 72 bp | GGATGGACAGGCACACTGTGCCAGAAGGATACACGTTaGGATGAAACAGTGGGGGCTCAAATTTACCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GWTGTLCQKDTR*DETVGAQIYLE Trigger: CTCCAGGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174216.8 |
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| CDS CAA 72 bp | CCCAGTTCATCAGGTTCATTGTGCCATCAGGGTTCTTaGTTGGGACAGCTACAAAGCCAAAAGGGTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSSGSLCHQGS*LGQLQSQKGGP Trigger: AGGACCACCCTTTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCACAATGAACCTGATGAACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000049911.16 ENSMUST00000172587.8 ENSMUST00000172618.8 ENSMUST00000172868.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
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| CDS CCA 72 bp | GATGGACAGGCACACTGTGCCAGAAGGATACACGTTTaGATGAAACAGTGGGGGCTCAAATTTACATTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DGQAHCARRIHV*MKQWGLKFTFW Trigger: CCAAAATGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
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| CDS CAA 72 bp | GGATGGACAGGCACACTGTGCCAGAAGGATACACGTTaGGATGAAACAGTGGGGGCTCAAATTTACATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GWTGTLCQKDTR*DETVGAQIYIL Trigger: CAAAATGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000049911.16 ENSMUST00000172618.8 ENSMUST00000173084.8 ENSMUST00000173621.8 ENSMUST00000173713.8 ENSMUST00000174001.8 ENSMUST00000174031.8 |
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