Pregenerated sensors for UBE2H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039159Ensembl transcript IDs: ENSMUST00000094543.3, ENSMUST00000102993.10
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGTCGCACAGGGGCTCAAGCAATGGGGCCAGTCTTCCTCCATCTaGTGGTCCACTGAGCCTTGTCCAGGGAGGAGACTGTCCCTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: RVAQGLKQWGQSSSI*WSTEPCPGRRLSLG Trigger: ACCAAGGGACAGTCTCCTCCCTGGACAAGGCTCAGTGGACCATCAGATGGAGGAAGACTGGCCCCATTGCTTGAGCCCCTGTGCGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 90 bp | GGCCACCTAGAACTTCGGGGAGCCCTTTCCAGGGCGCAGTTCCTTTaGGAAGGGACACTCCTCAGGAGCCTAGAGCAGCCGGTTGGCAAT | + |
|
Preference number: 1 (lower is better) Translates to: GHLELRGALSRAQFL*EGTLLRSLEQPVGN Trigger: ATTGCCAACCGGCTGCTCTAGGCTCCTGAGGAGTGTCCCTTCTCAAAGGAACTGCGCCCTGGAAAGGGCTCCCCGAAGTTCTAGGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | GCAGCAGCTGTGACTTACTGCCACCCCTGCCTGTTAAAGCAGCCCTaGCCTGCTGCAGATCTCACCTGTTTACTGCAGGGACGCAGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: AAAVTYCHPCLLKQP*PAADLTCLLQGRRA Trigger: GGCTCTGCGTCCCTGCAGTAAACAGGTGAGATCTGCAGCAGGGCAGGGCTGCTTTAACAGGCAGGGGTGGCAGTAAGTCACAGCTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | ATCTTGCTGCTCCTCACCAAGGACCACTCAGGACTAGGGAGCAGCTaGCAAGGACGGAGCAGCCTCACAGGCTCTCAAAGCACGCGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: ILLLLTKDHSGLGSS*QGRSSLTGSQSTRL Trigger: GAGACGCGTGCTTTGAGAGCCTGTGAGGCTGCTCCGTCCTTGCCAGCTGCTCCCTAGTCCTGAGTGGTCCTTGGTGAGGAGCAGCAAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | CACTCTGCACTCAGGTCTGCACAGGAAGGAATGCTGTCTCTTCACTaGGGCAAAGCGGACCCGGTGAGGGTCAGGAGCCAGAGCTGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: HSALRSAQEGMLSLH*GKADPVRVRSQSCS Trigger: TGAGCAGCTCTGGCTCCTGACCCTCACCGGGTCCGCTTTGCCCCAGTGAAGAGACAGCATTCCTTCCTGTGCAGACCTGAGTGCAGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 90 bp | GGATGGCATTTAGCCGGCAGCATGGGCCAGGCACCTCAAGCCATCTaGCTGGCTGTTACCTTGGAGGGTCAAAGTGTCCCCTCAACCTGC | + |
|
Preference number: 1 (lower is better) Translates to: GWHLAGSMGQAPQAI*LAVTLEGQSVPSTC Trigger: GCAGGTTGAGGGGACACTTTGACCCTCCAAGGTAACAGCCAGTCAGATGGCTTGAGGTGCCTGGCCCATGCTGCCGGCTAAATGCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | AGCTGTGACTTACTGCCACCCCTGCCTGTTAAAGCAGCCCTGCCCTaGTGCAGATCTCACCTGTTTACTGCAGGGACGCAGAGCCCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: SCDLLPPLPVKAALP*CRSHLFTAGTQSPQ Trigger: CTGAGGGCTCTGCGTCCCTGCAGTAAACAGGTGAGATCTGCAGCAGGGCAGGGCTGCTTTAACAGGCAGGGGTGGCAGTAAGTCACAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | CTGGCCCCCAGGGGCCGCCTTTCCATCCAATTCCCAAAGAGCTGGTaGAGGTGTTCAGTGGCCAGAGGAAGAGGAACATGGATTCACACG | + |
|
Preference number: 1 (lower is better) Translates to: LAPRGRLSIQFPKSW*RCSVARGRGTWIHT Trigger: CGTGTGAATCCATGTTCCTCTTCCTCTGGCCACTGAACACCTCCACCAGCTCTTTGGGAATTGGATGGAAAGGCGGCCCCTGGGGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | TGTGACTTACTGCCACCCCTGCCTGTTAAAGCAGCCCTGCCCTGCTaGAGATCTCACCTGTTTACTGCAGGGACGCAGAGCCCTCAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: CDLLPPLPVKAALPC*RSHLFTAGTQSPQS Trigger: TGACTGAGGGCTCTGCGTCCCTGCAGTAAACAGGTGAGATCTGCAGCAGGGCAGGGCTGCTTTAACAGGCAGGGGTGGCAGTAAGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | ACACCTTCACCATACGCCGAGATGGACACACTCTGCACTCAGGTCTaGACAGGAAGGAATGCTGTCTCTTCACTGGGGCAAAGCGGACCC | + |
|
Preference number: 1 (lower is better) Translates to: TPSPYAEMDTLCTQV*TGRNAVSSLGQSGP Trigger: GGGTCCGCTTTGCCCCAGTGAAGAGACAGCATTCCTTCCTGTGCAGACCTGAGTGCAGAGTGTGTCCATCTCGGCGTATGGTGAAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 90 bp | GAGCTGCTGTCTACACTGTCTCCAAATTCCCTCCAGAGTCAGGTCTaGAACTGCTGGGCACACTGGATGGCATTTAGCCGGCAGCATGGG | + |
|
Preference number: 1 (lower is better) Translates to: ELLSTLSPNSLQSQV*NCWAHWMAFSRQHG Trigger: CCCATGCTGCCGGCTAAATGCCATCCAGTGTGCCCAGCAGTTTCAGACCTGACTCTGGAGGGAATTTGGAGACAGTGTAGACAGCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | CAGAACCCAGTGACACCTTCACCATACGCCGAGATGGACACACTCTaGACTCAGGTCTGCACAGGAAGGAATGCTGTCTCTTCACTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: QNPVTPSPYAEMDTL*TQVCTGRNAVSSLG Trigger: CCCCAGTGAAGAGACAGCATTCCTTCCTGTGCAGACCTGAGTGCAGAGTGTGTCCATCTCGGCGTATGGTGAAGGTGTCACTGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | AGAGTCACAGCCCAGAGAGCTGCAACATGCATAGAACCATACTGGTaGCAGAGTCGAGGGTGGGGTGATGTGGGAGCGGTCATGGAAACT | + |
|
Preference number: 1 (lower is better) Translates to: RVTAQRAATCIEPYW*QSRGWGDVGAVMET Trigger: AGTTTCCATGACCGCTCCCACATCACCCCACCCTCGACTCTGGCACCAGTATGGTTCTATGCATGTTGCAGCTCTCTGGGCTGTGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | AGAGCTGCAACATGCATAGAACCATACTGGTGCCAGAGTCGAGGGTaGGGTGATGTGGGAGCGGTCATGGAAACTCCAGTGCTGCAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: RAATCIEPYWCQSRG*GDVGAVMETPVLQN Trigger: GTTCTGCAGCACTGGAGTTTCCATGACCGCTCCCACATCACCCCACCCTCGACTCTGGCACCAGTATGGTTCTATGCATGTTGCAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | AACAGAGTCACAGCCCAGAGAGCTGCAACATGCATAGAACCATACTaGTGCCAGAGTCGAGGGTGGGGTGATGTGGGAGCGGTCATGGAA | + |
|
Preference number: 1 (lower is better) Translates to: NRVTAQRAATCIEPY*CQSRGWGDVGAVME Trigger: TTCCATGACCGCTCCCACATCACCCCACCCTCGACTCTGGCACCAGTATGGTTCTATGCATGTTGCAGCTCTCTGGGCTGTGACTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 90 bp | ATTCCCGTCTCCTCCAGTCCTGCTCGCTCAATAATTCCTGCTGGATaGCAAGCTGTACCCCCAAAAGACATGGGTTCAGGAAATGCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: IPVSSSPARSIIPAG*QAVPPKDMGSGNAP Trigger: GGGAGCATTTCCTGAACCCATGTCTTTTGGGGGTACAGCTTGTCATCCAGCAGGAATTATTGAGCGAGCAGGACTGGAGGAGACGGGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | AGAGCCCTCAGTCAGAACCAGGCTTTAGCACTCTCTCCTCTCCTTTaGAAGTATGAGTATGGTCATCTAGTAACTAGGAGCGGGGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: RALSQNQALALSPLL*KYEYGHLVTRSGEG Trigger: CCCTTCCCCGCTCCTAGTTACTAGATGACCATACTCATACTTGCAAAGGAGAGGAGAGAGTGCTAAAGCCTGGTTCTGACTGAGGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | GAGTATGGTCATCTAGTAACTAGGAGCGGGGAAGGGCCAGAAAGCTaGCAAACCTTCTTAACAGAGTCACAGCCCAGAGAGCTGCAACAT | + |
|
Preference number: 1 (lower is better) Translates to: EYGHLVTRSGEGPES*QTFLTESQPRELQH Trigger: ATGTTGCAGCTCTCTGGGCTGTGACTCTGTTAAGAAGGTTTGCCAGCTTTCTGGCCCTTCCCCGCTCCTAGTTACTAGATGACCATACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | TGTCTTCATTCCCGTCTCCTCCAGTCCTGCTCGCTCAATAATTCCTaGTGGATGACAAGCTGTACCCCCAAAAGACATGGGTTCAGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: CLHSRLLQSCSLNNS*WMTSCTPKRHGFRK Trigger: TTTCCTGAACCCATGTCTTTTGGGGGTACAGCTTGTCATCCAGCAGGAATTATTGAGCGAGCAGGACTGGAGGAGACGGGAATGAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | CCAAAGAGCTGGTGGAGGTGTTCAGTGGCCAGAGGAAGAGGAACATaGATTCACACGTCCAAAGAATGCAGTTCTTTGTGCCCAATCAGA | + |
|
Preference number: 1 (lower is better) Translates to: PKSWWRCSVARGRGT*IHTSKECSSLCPIR Trigger: TCTGATTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCCTCTGGCCACTGAACACCTCCACCAGCTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | GTTCCTTTGAGAAGGGACACTCCTCAGGAGCCTAGAGCAGCCGGTTaGCAATTAGAACAGCGTTTGAAGTGGACAAAACACATTAGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: VPLRRDTPQEPRAAG*QLEQRLKWTKHISA Trigger: AGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACCGGCTGCTCTAGGCTCCTGAGGAGTGTCCCTTCTCAAAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | TCAGTGGCCAGAGGAAGAGGAACATGGATTCACACGTCCAAAGAATaGAGTTCTTTGTGCCCAATCAGAAATGAGTTGGTTTCACTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: SVARGRGTWIHTSKE*SSLCPIRNELVSLS Trigger: GCTGAGTGAAACCAACTCATTTCTGATTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCCTCTGGCCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 90 bp | CAGGAGCCTAGAGCAGCCGGTTGGCAATTAGAACAGCGTTTGAAGTaGACAAAACACATTAGTGCTGGAGAGATGTTGCAACTTCTGATA | + |
|
Preference number: 1 (lower is better) Translates to: QEPRAAGWQLEQRLK*TKHISAGEMLQLLI Trigger: TATCAGAAGTTGCAACATCTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACCGGCTGCTCTAGGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | GCCACTTTGGTACAAAAACTTCCGTTTGTTTCAGCTGTTACCCATTaGAAATTTAGGATGTTCTGGGTCTCAGACGCCCAATCTACCCAC | + |
|
Preference number: 1 (lower is better) Translates to: ATLVQKLPFVSAVTH*KFRMFWVSDAQSTH Trigger: GTGGGTAGATTGGGCGTCTGAGACCCAGAACATCCTAAATTTGCAATGGGTAACAGCTGAAACAAACGGAAGTTTTTGTACCAAAGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | GGAAGAGGAACATGGATTCACACGTCCAAAGAATGCAGTTCTTTGTaGCCAATCAGAAATGAGTTGGTTTCACTCAGCAAGGCTATGACC | + |
|
Preference number: 1 (lower is better) Translates to: GRGTWIHTSKECSSL*PIRNELVSLSKAMT Trigger: GGTCATAGCCTTGCTGAGTGAAACCAACTCATTTCTGATTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 90 bp | ACACAACTATTAAGAGGTTATAGTCAGAAGAGGCAATTGTCCAGGTaGCAGACATGCCCACTAGATCATCACAATGCAAGGAGGGCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: TQLLRGYSQKRQLSR*QTCPLDHHNARRAE Trigger: TTCTGCCCTCCTTGCATTGTGATGATCTAGTGGGCATGTCTGTCACCTGGACAATTGCCTCTTCTGACTATAACCTCTTAATAGTTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 90 bp | TACTTCTACTGTTCTGGTTTTGTCAAAAAGAATACAGAGCAGAGCTaGTGTCTACACTGTCTCCAAATTCCCTCCAGAGTCAGGTCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: YFYCSGFVKKNTEQS*CLHCLQIPSRVRSE Trigger: TTCAGACCTGACTCTGGAGGGAATTTGGAGACAGTGTAGACAGCAGCTCTGCTCTGTATTCTTTTTGACAAAACCAGAACAGTAGAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 90 bp | AGGCCACCTAGAACTTCGGGGAGCCCTTTCCAGGGCGCAGTTCCTTaGAGAAGGGACACTCCTCAGGAGCCTAGAGCAGCCGGTTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RPPRTSGSPFQGAVP*RRDTPQEPRAAGWQ Trigger: TTGCCAACCGGCTGCTCTAGGCTCCTGAGGAGTGTCCCTTCTCAAAGGAACTGCGCCCTGGAAAGGGCTCCCCGAAGTTCTAGGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 90 bp | GGGCAGAGACTGCTGACAAAACAATTTCTAATGCCAGGGTCTAGGTaGGCAAGCACGGAACACAGCCTGCTGGCCCCGGTGCTGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GQRLLTKQFLMPGSR*ASTEHSLLAPVLGF Trigger: GAAGCCCAGCACCGGGGCCAGCAGGCTGTGTTCCGTGCTTGCCAACCTAGACCCTGGCATTAGAAATTGTTTTGTCAGCAGTCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGACGCAGAGCCCTCAGTCAGAACCAGGCTTTAGCACTCTCTCCTCTCCTTTGCAGTCTTCCTCCATCTaGTGGTCCACTGAGCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GTQSPQSEPGFSTLSSPLQSSSI*WSTEPC Trigger: ACAAGGCTCAGTGGACCATCAGATGGAGGAAGACTG...CAAAGGAGAGGAGAGAGTGCTAAAGCCTGGTTCTGACTGAGGGCTCTGCGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGACGCAGAGCCCTCAGTCAGAACCAGGCTTTAGCACTCTCTCCTCTCCTTTGCGTCTCCTCCAGTCCTaGTCGCTCAATAATTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GTQSPQSEPGFSTLSSPLRLLQS*SLNNSC Trigger: GCAGGAATTATTGAGCGAGCAGGACTGGAGGAGACG...CAAAGGAGAGGAGAGAGTGCTAAAGCCTGGTTCTGACTGAGGGCTCTGCGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTCACCAAGGACCACTCAGGACTAGGGAGCAGCTGGCAAGGACGGAGCAGCCCTTCCTTCCCACTCTaGAAAAGCACTGTTCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: LLTKDHSGLGSSWQGRSSPSFPL*KSTVLS Trigger: AGATAGAACAGTGCTTTTCCAGAGTGGGAAGGAAGG...GCTGCTCCGTCCTTGCCAGCTGCTCCCTAGTCCTGAGTGGTCCTTGGTGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAAGAGGAACATGGATTCACACGTCCAAAGAATGCAGTTCTTTGTGCCCAATGCCAGAGTCGAGGGTaGGGTGATGTGGGAGCGGTC | + |
|
Preference number: 2 (lower is better) Translates to: EEEEHGFTRPKNAVLCAQCQSRG*GDVGAV Trigger: GACCGCTCCCACATCACCCCACCCTCGACTCTGGCA...TTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTCAGTCCAGGCAATGGATCAACAGGCCCCGTGCTAGGATCAGATGTCACATAATTCCTGCTGGATaGCAAGCTGTACCCCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TAQSRQWINRPRARIRCHIIPAG*QAVPPK Trigger: TTTTGGGGGTACAGCTTGTCATCCAGCAGGAATTAT...GTGACATCTGATCCTAGCACGGGGCCTGTTGATCCATTGCCTGGACTGAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGACGCAGAGCCCTCAGTCAGAACCAGGCTTTAGCACTCTCTCCTCTCCTTTGCCCAAAGAAACCTTTTaGTTCATGCCCGTAATTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GTQSPQSEPGFSTLSSPLPKETF*FMPVIN Trigger: GTTAATTACGGGCATGAAGCAAAAGGTTTCTTTGGG...CAAAGGAGAGGAGAGAGTGCTAAAGCCTGGTTCTGACTGAGGGCTCTGCGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 90 bp | ACTCCTCAGGAGCCTAGAGCAGCCGGTTGGCAATTAGAACAGCGTTaGAAGTGGACAAAACACATTAGTGCTGGAGAGATGTTGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: TPQEPRAAGWQLEQR*KWTKHISAGEMLQL Trigger: AAGTTGCAACATCTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACCGGCTGCTCTAGGCTCCTGAGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR GCA 90 bp | GGTTGGCAATTAGAACAGCGTTTGAAGTGGACAAAACACATTAGTGCTGGAGAGGAGATGGACACACTCTaGACTCAGGTCTGCACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GWQLEQRLKWTKHISAGEEMDTL*TQVCTG Trigger: TCCTGTGCAGACCTGAGTGCAGAGTGTGTCCATCTC...CTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR CCA 90 bp | AAACTTCCGTTTGTTTCAGCTGTTACCCATTGCAAATTTAGGATGTTCTGGGTCCAGGGGCTCAAGCAATaGGGCCAGTCTTCCTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: KLPFVSAVTHCKFRMFWVQGLKQ*GQSSSI Trigger: GATGGAGGAAGACTGGCCCCATTGCTTGAGCCCCTG...GACCCAGAACATCCTAAATTTGCAATGGGTAACAGCTGAAACAAACGGAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAAGAGGAACATGGATTCACACGTCCAAAGAATGCAGTTCTTTGTGCCCAACCCCAAACTTGGCTCTaGTTTGTTGTGTCTGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: EEEEHGFTRPKNAVLCAQPQTWL*FVVSVL Trigger: CAAAACAGACACAACAAACCAGAGCCAAGTTTGGGG...TTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 90 bp | TCCGTAACAATTCTCGAAAGTAGTTCTTCCCCACCTCCGGCCACTTaGGTACAAAAACTTCCGTTTGTTTCAGCTGTTACCCATTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SVTILESSSSPPPAT*VQKLPFVSAVTHCK Trigger: TTTGCAATGGGTAACAGCTGAAACAAACGGAAGTTTTTGTACCAAAGTGGCCGGAGGTGGGGAAGAACTACTTTCGAGAATTGTTACGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 90 bp | AGAGGAAGAGGAACATGGATTCACACGTCCAAAGAATGCAGTTCTTaGTGCCCAATCAGAAATGAGTTGGTTTCACTCAGCAAGGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: RGRGTWIHTSKECSS*CPIRNELVSLSKAM Trigger: CATAGCCTTGCTGAGTGAAACCAACTCATTTCTGATTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR GCA 90 bp | GGTTGGCAATTAGAACAGCGTTTGAAGTGGACAAAACACATTAGTGCTGGAGAGCCAGCACTACAAAACTaGATGTTCCCCAAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: GWQLEQRLKWTKHISAGEPALQN*MFPKET Trigger: GGTTTCTTTGGGGAACATGCAGTTTTGTAGTGCTGG...CTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR GCA 90 bp | CAATTCTCGAAAGTAGTTCTTCCCCACCTCCGGCCACTTTGGTACAAAAACTTCAAATGGACTTATGAATaGATGCATTCGGACTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: QFSKVVLPHLRPLWYKNFKWTYE*MHSDCI Trigger: TATGCAGTCCGAATGCATGCATTCATAAGTCCATTT...GAAGTTTTTGTACCAAAGTGGCCGGAGGTGGGGAAGAACTACTTTCGAGAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | GAACTTCGGGGAGCCCTTTCCAGGGCGCAGTTCCTTTaGGAAGGGACACTCCTCAGGAGCCTAGAGCAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: ELRGALSRAQFL*EGTLLRSLEQP Trigger: CGGCTGCTCTAGGCTCCTGAGGAGTGTCCCTTCTCAAAGGAACTGCGCCCTGGAAAGGGCTCCCCGAAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | CTCCTCACCAAGGACCACTCAGGACTAGGGAGCAGCTaGCAAGGACGGAGCAGCCTCACAGGCTCTCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTKDHSGLGSS*QGRSSLTGSQS Trigger: GCTTTGAGAGCCTGTGAGGCTGCTCCGTCCTTGCCAGCTGCTCCCTAGTCCTGAGTGGTCCTTGGTGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | CTCAGGTCTGCACAGGAAGGAATGCTGTCTCTTCACTaGGGCAAAGCGGACCCGGTGAGGGTCAGGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRSAQEGMLSLH*GKADPVRVRSQ Trigger: CTGGCTCCTGACCCTCACCGGGTCCGCTTTGCCCCAGTGAAGAGACAGCATTCCTTCCTGTGCAGACCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | CAGGGGCTCAAGCAATGGGGCCAGTCTTCCTCCATCTaGTGGTCCACTGAGCCTTGTCCAGGGAGGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: QGLKQWGQSSSI*WSTEPCPGRRL Trigger: CAGTCTCCTCCCTGGACAAGGCTCAGTGGACCATCAGATGGAGGAAGACTGGCCCCATTGCTTGAGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | TTAGCCGGCAGCATGGGCCAGGCACCTCAAGCCATCTaGCTGGCTGTTACCTTGGAGGGTCAAAGTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LAGSMGQAPQAI*LAVTLEGQSVP Trigger: GGGGACACTTTGACCCTCCAAGGTAACAGCCAGTCAGATGGCTTGAGGTGCCTGGCCCATGCTGCCGGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 72 bp | AGCAGCCCTGCCCTGCTGCAGATCTCACCTGTTTACTaGAGGGACGCAGAGCCCTCAGTCAGAACCAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSPALLQISPVY*RDAEPSVRTRL Trigger: AAGCCTGGTTCTGACTGAGGGCTCTGCGTCCCTGCAGTAAACAGGTGAGATCTGCAGCAGGGCAGGGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | GCCAGGCACCTCAAGCCATCTGACTGGCTGTTACCTTaGAGGGTCAAAGTGTCCCCTCAACCTGCCTCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: ARHLKPSDWLLP*RVKVSPQPASV Trigger: TACGGAGGCAGGTTGAGGGGACACTTTGACCCTCCAAGGTAACAGCCAGTCAGATGGCTTGAGGTGCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | TCCAGAGTCAGGTCTGAAACTGCTGGGCACACTGGATaGCATTTAGCCGGCAGCATGGGCCAGGCACCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SRVRSETAGHTG*HLAGSMGQAPQ Trigger: TTGAGGTGCCTGGCCCATGCTGCCGGCTAAATGCCATCCAGTGTGCCCAGCAGTTTCAGACCTGACTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | AACCATACTGGTGCCAGAGTCGAGGGTGGGGTGATGTaGGAGCGGTCATGGAAACTCCAGTGCTGCAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: NHTGARVEGGVM*ERSWKLQCCRT Trigger: GGTTCTGCAGCACTGGAGTTTCCATGACCGCTCCCACATCACCCCACCCTCGACTCTGGCACCAGTATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | ACAGCCCAGAGAGCTGCAACATGCATAGAACCATACTaGTGCCAGAGTCGAGGGTGGGGTGATGTGGGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: TAQRAATCIEPY*CQSRGWGDVGA Trigger: CGCTCCCACATCACCCCACCCTCGACTCTGGCACCAGTATGGTTCTATGCATGTTGCAGCTCTCTGGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | CCCAGGGGCCGCCTTTCCATCCAATTCCCAAAGAGCTaGTGGAGGTGTTCAGTGGCCAGAGGAAGAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PRGRLSIQFPKS*WRCSVARGRGT Trigger: TGTTCCTCTTCCTCTGGCCACTGAACACCTCCACCAGCTCTTTGGGAATTGGATGGAAAGGCGGCCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | AGGGGCCGCCTTTCCATCCAATTCCCAAAGAGCTGGTaGAGGTGTTCAGTGGCCAGAGGAAGAGGAACATGG | + |
|
Preference number: 3 (lower is better) Translates to: RGRLSIQFPKSW*RCSVARGRGTW Trigger: CCATGTTCCTCTTCCTCTGGCCACTGAACACCTCCACCAGCTCTTTGGGAATTGGATGGAAAGGCGGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | GAGCGGTCATGGAAACTCCAGTGCTGCAGAACCCAGTaGCACCTTCACCATACGCCGAGATGGACACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: ERSWKLQCCRTQ*HLHHTPRWTHS Trigger: AGAGTGTGTCCATCTCGGCGTATGGTGAAGGTGTCACTGGGTTCTGCAGCACTGGAGTTTCCATGACCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 72 bp | CTCCCCAAATGTTCTCCAAGGCAAAACCAAGGTGGCTaGAGGTCTGGTAGCAAGGAGGGCAGGAGTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: LPKCSPRQNQGG*RSGSKEGRSLP Trigger: AGGTAGACTCCTGCCCTCCTTGCTACCAGACCTGCAGCCACCTTGGTTTTGCCTTGGAGAACATTTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 72 bp | AGCATGAGCAAAGGCCTAATCCGCAGGGAAGCAAGCTaGAGGGCCAGCAGAAACCCTCCTAATCACACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SMSKGLIRREAS*RASRNPPNHTE Trigger: CTCTGTGTGATTAGGAGGGTTTCTGCTGGCCCTGCAGCTTGCTTCCCTGCGGATTAGGCCTTTGCTCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | ACATGCATAGAACCATACTGGTGCCAGAGTCGAGGGTaGGGTGATGTGGGAGCGGTCATGGAAACTCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TCIEPYWCQSRG*GDVGAVMETPV Trigger: CACTGGAGTTTCCATGACCGCTCCCACATCACCCCACCCTCGACTCTGGCACCAGTATGGTTCTATGCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 72 bp | GTGACACCTTCACCATACGCCGAGATGGACACACTCTaGACTCAGGTCTGCACAGGAAGGAATGCTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTPSPYAEMDTL*TQVCTGRNAVS Trigger: AGAGACAGCATTCCTTCCTGTGCAGACCTGAGTGCAGAGTGTGTCCATCTCGGCGTATGGTGAAGGTGTCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | TCTACACTGTCTCCAAATTCCCTCCAGAGTCAGGTCTaGAACTGCTGGGCACACTGGATGGCATTTAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: STLSPNSLQSQV*NCWAHWMAFSR Trigger: CCGGCTAAATGCCATCCAGTGTGCCCAGCAGTTTCAGACCTGACTCTGGAGGGAATTTGGAGACAGTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | CATCTAGTAACTAGGAGCGGGGAAGGGCCAGAAAGCTaGCAAACCTTCTTAACAGAGTCACAGCCCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLVTRSGEGPES*QTFLTESQPRE Trigger: CTCTCTGGGCTGTGACTCTGTTAAGAAGGTTTGCCAGCTTTCTGGCCCTTCCCCGCTCCTAGTTACTAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | TCCTCCAGTCCTGCTCGCTCAATAATTCCTGCTGGATaGCAAGCTGTACCCCCAAAAGACATGGGTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSSPARSIIPAG*QAVPPKDMGSG Trigger: TCCTGAACCCATGTCTTTTGGGGGTACAGCTTGTCATCCAGCAGGAATTATTGAGCGAGCAGGACTGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | AGAAGGGACACTCCTCAGGAGCCTAGAGCAGCCGGTTaGCAATTAGAACAGCGTTTGAAGTGGACAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: RRDTPQEPRAAG*QLEQRLKWTKH Trigger: GTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACCGGCTGCTCTAGGCTCCTGAGGAGTGTCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 72 bp | TCACTCTTGTGTCTTCATTCCCGTCTCCTCCAGTCCTaGTCGCTCAATAATTCCTGCTGGATGACAAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLCLHSRLLQS*SLNNSCWMTSC Trigger: ACAGCTTGTCATCCAGCAGGAATTATTGAGCGAGCAGGACTGGAGGAGACGGGAATGAAGACACAAGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | TGGTGGAGGTGTTCAGTGGCCAGAGGAAGAGGAACATaGATTCACACGTCCAAAGAATGCAGTTCTTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WWRCSVARGRGT*IHTSKECSSLC Trigger: GCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCCTCTGGCCACTGAACACCTCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | GTTTCAGCTGTTACCCATTGCAAATTTAGGATGTTCTaGGTCTCAGACGCCCAATCTACCCACTCCCGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSAVTHCKFRMF*VSDAQSTHSRK Trigger: CTTACGGGAGTGGGTAGATTGGGCGTCTGAGACCCAGAACATCCTAAATTTGCAATGGGTAACAGCTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTCCGTTTGTTTCAGCTGTTACCCATTGCAAATTTAGGATGTTCTGGGTCCACTCCCGTAAGCAGTaGGCAGCTTCCAGGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: KLPFVSAVTHCKFRMFWVHSRKQ*AASRRT Trigger: AGTTCTCCTGGAAGCTGCCAACTGCTTACGGGAGTG...GACCCAGAACATCCTAAATTTGCAATGGGTAACAGCTGAAACAAACGGAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | TTCTCGAAAGTAGTTCTTCCCCACCTCCGGCCACTTTaGTACAAAAACTTCCGTTTGTTTCAGCTGTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: FSKVVLPHLRPL*YKNFRLFQLLP Trigger: GGGTAACAGCTGAAACAAACGGAAGTTTTTGTACCAAAGTGGCCGGAGGTGGGGAAGAACTACTTTCGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 72 bp | AGTCAGAACCAGGCTTTAGCACTCTCTCCTCTCCTTTaGAAGTATGAGTATGGTCATCTAGTAACTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQNQALALSPLL*KYEYGHLVTRS Trigger: GCTCCTAGTTACTAGATGACCATACTCATACTTGCAAAGGAGAGGAGAGAGTGCTAAAGCCTGGTTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | AGAGCAGCCGGTTGGCAATTAGAACAGCGTTTGAAGTaGACAAAACACATTAGTGCTGGAGAGATGTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RAAGWQLEQRLK*TKHISAGEMLQ Trigger: TTGCAACATCTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACCGGCTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | GTCCAAAGAATGCAGTTCTTTGTGCCCAATCAGAAATaGGTTGGTTTCACTCAGCAAGGCTATGACCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VQRMQFFVPNQK*VGFTQQGYDPV Trigger: AACTGGGTCATAGCCTTGCTGAGTGAAACCAACTCATTTCTGATTGGGCACAAAGAACTGCATTCTTTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | TTAAGAGGTTATAGTCAGAAGAGGCAATTGTCCAGGTaGCAGACATGCCCACTAGATCATCACAATGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRGYSQKRQLSR*QTCPLDHHNAR Trigger: CCTTGCATTGTGATGATCTAGTGGGCATGTCTGTCACCTGGACAATTGCCTCTTCTGACTATAACCTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR GCA 72 bp | AGAGGAAGAGGAACATGGATTCACACGTCCAAAGAATaGAGTTCTTTGTGCCCAATCAGAAATGAGTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RGRGTWIHTSKE*SSLCPIRNELV Trigger: AACCAACTCATTTCTGATTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCCTCTTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CCA 72 bp | GTCTTCAGGTCTTACGATTGGCTACTTCTACTGTTCTaGTTTTGTCAAAAAGAATACAGAGCAGAGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VFRSYDWLLLLF*FCQKEYRAELL Trigger: CAGCAGCTCTGCTCTGTATTCTTTTTGACAAAACCAGAACAGTAGAAGTAGCCAATCGTAAGACCTGAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR TCA 72 bp | CAATCAGAAATGAGTTGGTTTCACTCAGCAAGGCTATaGCCCAGTTACAAGTTGACAAAACAAACTGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: QSEMSWFHSARL*PSYKLTKQTAN Trigger: GTTAGCAGTTTGTTTTGTCAACTTGTAACTGGGTCATAGCCTTGCTGAGTGAAACCAACTCATTTCTGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | AGAACTTCGGGGAGCCCTTTCCAGGGCGCAGTTCCTTaGAGAAGGGACACTCCTCAGGAGCCTAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSGSPFQGAVP*RRDTPQEPRAA Trigger: GGCTGCTCTAGGCTCCTGAGGAGTGTCCCTTCTCAAAGGAACTGCGCCCTGGAAAGGGCTCCCCGAAGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR GCA 90 bp | AACCAAGGTGGCTGCAGGTCTGGTAGCAAGGAGGGCAGGAGTCTACCTAGAAAATGTCCATCCGCCTCTTaGCGGGACTGGGGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: NQGGCRSGSKEGRSLPRKCPSAS*RDWGMT Trigger: TGTCATCCCCCAGTCCCGGCAAGAGGCGGATGGACA...TTTTCTAGGTAGACTCCTGCCCTCCTTGCTACCAGACCTGCAGCCACCTTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | GGGCTGCCAAGTTGCAGCCACTTCACTCATCGGTGTTaGTTTGGCAAGGGCTCAAGTCATCAACGGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLPSCSHFTHRC*FGKGSSHQRGQ Trigger: TTGCCCCCGTTGATGACTTGAGCCCTTGCCAAACAAACACCGATGAGTGAAGTGGCTGCAACTTGGCAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | CTGCTGACAAAACAATTTCTAATGCCAGGGTCTAGGTaGGCAAGCACGGAACACAGCCTGCTGGCCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTKQFLMPGSR*ASTEHSLLAPV Trigger: CACCGGGGCCAGCAGGCTGTGTTCCGTGCTTGCCAACCTAGACCCTGGCATTAGAAATTGTTTTGTCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR TCA 90 bp | TTGGCAGCTTCCAGGAGAACTAAGGCTGGAGGTCAAGGGTCGCACAGGGGCTCACTGGGCCTCATCTTCTaGGAAGTCAGACATAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LAASRRTKAGGQGSHRGSLGLIF*EVRHRT Trigger: AGTTCTATGTCTGACTTCTCAGAAGATGAGGCCCAG...TGAGCCCCTGTGCGACCCTTGACCTCCAGCCTTAGTTCTCCTGGAAGCTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR GCA 90 bp | AACCAAGGTGGCTGCAGGTCTGGTAGCAAGGAGGGCAGGAGTCTACCTAGAAAAATGAGCTGTCGCCAGTaGCCTCTTCCTGTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NQGGCRSGSKEGRSLPRKMSCRQ*PLPVPS Trigger: TGAAGGAACAGGAAGAGGGCACTGGCGACAGCTCAT...TTTTCTAGGTAGACTCCTGCCCTCCTTGCTACCAGACCTGCAGCCACCTTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | ATCAAAAGCCCTAAGTCTCACTCAACTCGCTGCATCTaGCTGCTCCTCACCAAGGACCACTCAGGACTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKSPKSHSTRCI*LLLTKDHSGLG Trigger: CCCTAGTCCTGAGTGGTCCTTGGTGAGGAGCAGCAAGATGCAGCGAGTTGAGTGAGACTTAGGGCTTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | TGCCAAGTTGCAGCCACTTCACTCATCGGTGTTTGTTaGGCAAGGGCTCAAGTCATCAACGGGGGCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CQVAATSLIGVC*ARAQVINGGKG Trigger: TCCTTTGCCCCCGTTGATGACTTGAGCCCTTGCCAAACAAACACCGATGAGTGAAGTGGCTGCAACTTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR CCA 90 bp | CTCCTCACCAAGGACCACTCAGGACTAGGGAGCAGCTGGCAAGGACGGAGCAGCCATGAATCCTATAGATaGAGACTTGAAAGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLTKDHSGLGSSWQGRSSHESYR*RLERVF Trigger: AAATACCCTTTCAAGTCTCCATCTATAGGATTCATG...GCTGCTCCGTCCTTGCCAGCTGCTCCCTAGTCCTGAGTGGTCCTTGGTGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | TCAGGAGCCAGAGCTGCTCACACCCGTTCCCCAAACTaGGCTCTGGTTTGTTGTGTCTGTTTTGTAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGARAAHTRSPN*ALVCCVCFVVF Trigger: AAAAACTACAAAACAGACACAACAAACCAGAGCCAAGTTTGGGGAACGGGTGTGAGCAGCTCTGGCTCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | GAGCCTAGAGCAGCCGGTTGGCAATTAGAACAGCGTTaGAAGTGGACAAAACACATTAGTGCTGGAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EPRAAGWQLEQR*KWTKHISAGEM Trigger: CATCTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACCGGCTGCTCTAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR GCA 90 bp | AAACTTCCGTTTGTTTCAGCTGTTACCCATTGCAAATTTAGGATGTTCTGGGTCCAGGGCCTCTTCCGTTaGGTACTTCTGGATGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KLPFVSAVTHCKFRMFWVQGLFR*VLLDVL Trigger: GAGTACATCCAGAAGTACGCAACGGAAGAGGCCCTG...GACCCAGAACATCCTAAATTTGCAATGGGTAACAGCTGAAACAAACGGAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | CCCCACCTCCGGCCACTTTGGTACAAAAACTTCCGTTaGTTTCAGCTGTTACCCATTGCAAATTTAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLRPLWYKNFR*FQLLPIANLGC Trigger: ACATCCTAAATTTGCAATGGGTAACAGCTGAAACAAACGGAAGTTTTTGTACCAAAGTGGCCGGAGGTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | ATTCTCGAAAGTAGTTCTTCCCCACCTCCGGCCACTTaGGTACAAAAACTTCCGTTTGTTTCAGCTGTTACC | + |
|
Preference number: 4 (lower is better) Translates to: ILESSSSPPPAT*VQKLPFVSAVT Trigger: GGTAACAGCTGAAACAAACGGAAGTTTTTGTACCAAAGTGGCCGGAGGTGGGGAAGAACTACTTTCGAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | GGAACATGGATTCACACGTCCAAAGAATGCAGTTCTTaGTGCCCAATCAGAAATGAGTTGGTTTCACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTWIHTSKECSS*CPIRNELVSLS Trigger: GCTGAGTGAAACCAACTCATTTCTGATTGGGCACAAAGAACTGCATTCTTTGGACGTGTGAATCCATGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| 3UTR CAA 72 bp | CAGGTCTTACGATTGGCTACTTCTACTGTTCTGGTTTaGTCAAAAAGAATACAGAGCAGAGCTGCTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLRLATSTVLV*SKRIQSRAAVY Trigger: GTAGACAGCAGCTCTGCTCTGTATTCTTTTTGACAAAACCAGAACAGTAGAAGTAGCCAATCGTAAGACCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR CCA 90 bp | GGTTGGCAATTAGAACAGCGTTTGAAGTGGACAAAACACATTAGTGCTGGAGAGTCCGTTGCGTACTTCTaGATGTACTCTTTAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GWQLEQRLKWTKHISAGESVAYF*MYSLIF Trigger: GAAAATTAAAGAGTACATCCAGAAGTACGCAACGGA...CTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR CAA 90 bp | CAATTCTCGAAAGTAGTTCTTCCCCACCTCCGGCCACTTTGGTACAAAAACTTCGTGTCCATCCGCCTCTaGCCGGGACTGGGGGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: QFSKVVLPHLRPLWYKNFVSIRL*PGLGDD Trigger: GTCATCCCCCAGTCCCGGCAAGAGGCGGATGGACAC...GAAGTTTTTGTACCAAAGTGGCCGGAGGTGGGGAAGAACTACTTTCGAGAATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR CAA 90 bp | AAACTTCCGTTTGTTTCAGCTGTTACCCATTGCAAATTTAGGATGTTCTGGGTCTTGCTTTCAATGAGCTaGACTACGTCCGTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: KLPFVSAVTHCKFRMFWVLLSMS*TTSVSI Trigger: GATGGACACGGACGTAGTCAAGCTCATTGAAAGCAA...GACCCAGAACATCCTAAATTTGCAATGGGTAACAGCTGAAACAAACGGAAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS-3UTR CAA 90 bp | GGTTGGCAATTAGAACAGCGTTTGAAGTGGACAAAACACATTAGTGCTGGAGAGCCTATAGATGGAGACTaGAAAGGGTATTTATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GWQLEQRLKWTKHISAGEPIDGD*KGYLSG Trigger: TCCTGATAAATACCCTTTCAAGTCTCCATCTATAGG...CTCTCCAGCACTAATGTGTTTTGTCCACTTCAAACGCTGTTCTAATTGCCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102993.10 |
||
| CDS CCA 72 bp | CACTTTCCACACCCCGCCTTCATATGGTGTTCCTTGTaGTCCGTAAAACTTGACAACGAATTCATTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HFPHPAFIWCSL*SVKLDNEFIES Trigger: GGACTCAATGAATTCGTTGTCAAGTTTTACGGACCACAAGGAACACCATATGAAGGCGGGGTGTGGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094543.3 ENSMUST00000102993.10 |
||
| CDS CAA 72 bp | TCTCACTTTCCACACCCCGCCTTCATATGGTGTTCCTaGTGGTCCGTAAAACTTGACAACGAATTCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHFPHPAFIWCS*WSVKLDNEFIE Trigger: CTCAATGAATTCGTTGTCAAGTTTTACGGACCACAAGGAACACCATATGAAGGCGGGGTGTGGAAAGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094543.3 ENSMUST00000102993.10 |
||
| CDS CAA 72 bp | AATTCATTGAGTCCTCCTAGGATTGTAACCTCATGTTaGCTTTCAATGAGCTTGACTACGTCCGTGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: NSLSPPRIVTSC*LSMSLTTSVSI Trigger: GATGGACACGGACGTAGTCAAGCTCATTGAAAGCAAACATGAGGTTACAATCCTAGGAGGACTCAATGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094543.3 ENSMUST00000102993.10 |
||