Pregenerated sensors for UBE2G2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009293Ensembl transcript IDs: ENSMUST00000172772.2, ENSMUST00000172813.2, ENSMUST00000174510.8, ENSMUST00000174546.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTATTGCTTGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTaGTGTCAGACCCCCTCCACCCTGGCCTGCACCATAGCAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LLLVGSARALWLSRS*CQTPSTLACTIAAP Trigger: GGGAGCTGCTATGGTGCAGGCCAGGGTGGAGGGGGTCTGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CCA 90 bp | CGCACTCCACATCTGTTATTGCTTGTGGGGTCGGCTCGGGCCCTGTaGCTCAGCAGGTCCTGCTGTCAGACCCCCTCCACCCTGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RTPHLLLLVGSARAL*LSRSCCQTPSTLAC Trigger: GCAGGCCAGGGTGGAGGGGGTCTGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAACAGATGTGGAGTGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CCA 90 bp | GCAGAGGTGAGGACCCCATGGCTGAGAGAGGTAGTGAGGACAGCCTaGGCCCTCCCTGAGGTGCGCACACAACACAGCAGGAGGAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: AEVRTPWLREVVRTA*ALPEVRTQHSRRSL Trigger: AAGACTCCTCCTGCTGTGTTGTGTGCGCACCTCAGGGAGGGCCCAGGCTGTCCTCACTACCTCTCTCAGCCATGGGGTCCTCACCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | TGCCTGGCTTGGGTGGAAAGGAAGAAACAACGGGGGCTGTGGCTCTaGACTGCCTGTGTTGGTGTTGGCATGGCAGCGCTGTCGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: CLAWVERKKQRGLWL*TACVGVGMAALSPQ Trigger: CTGTGGCGACAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCCCCCGTTGTTTCTTCCTTTCCACCCAAGCCAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | GGCTTGGGTGGAAAGGAAGAAACAACGGGGGCTGTGGCTCTGCACTaGCTGTGTTGGTGTTGGCATGGCAGCGCTGTCGCCACAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: GLGGKEETTGAVALH*LCWCWHGSAVATGS Trigger: AGAACCTGTGGCGACAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCCCCCGTTGTTTCTTCCTTTCCACCCAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR TCA 90 bp | GTGCAGTGTGTATGCAGGGCCCCCAGGAGACCCACACTAAAGCTCTaGCAGTCCCGCCTGTCGGTCGAGTGTGCACCACTAACTCAGACA | + |
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Preference number: 1 (lower is better) Translates to: VQCVCRAPRRPTLKL*QSRLSVECAPLTQT Trigger: TGTCTGAGTTAGTGGTGCACACTCGACCGACAGGCGGGACTGTCAGAGCTTTAGTGTGGGTCTCCTGGGGGCCCTGCATACACACTGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | GCAGGATCTTCTCCACACTCTGCACTGGGCTCCACCGCTCGGCACTaGTCTCATAACCCATGGGATCATCACCTGGAGCATGCAGGATGG | + |
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Preference number: 1 (lower is better) Translates to: AGSSPHSALGSTARH*SHNPWDHHLEHAGW Trigger: CCATCCTGCATGCTCCAGGTGATGATCCCATGGGTTATGAGAGCAGTGCCGAGCGGTGGAGCCCAGTGCAGAGTGTGGAGAAGATCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR CCA 90 bp | AGAAAAGGCCAAGCATCCACCGCACTCCACATCTGTTATTGCTTGTaGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: RKGQASTALHICYCL*GRLGPCGSAGPAVR Trigger: TCTGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAACAGATGTGGAGTGCGGTGGATGCTTGGCCTTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | CTGTTTAGAAAAGGCCAAGCATCCACCGCACTCCACATCTGTTATTaGTTGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: LFRKGQASTALHICY*LWGRLGPCGSAGPA Trigger: AGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAACAGATGTGGAGTGCGGTGGATGCTTGGCCTTTTCTAAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CCA 90 bp | AGCAGCTGTCATTATCCCAGTCATGATCTAGGGAGCTGCCTGGCTTaGGTGGAAAGGAAGAAACAACGGGGGCTGTGGCTCTGCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: SSCHYPSHDLGSCLA*VERKKQRGLWLCTA Trigger: GGCAGTGCAGAGCCACAGCCCCCGTTGTTTCTTCCTTTCCACCCAAGCCAGGCAGCTCCCTAGATCATGACTGGGATAATGACAGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CCA 90 bp | GCCCCAGGGCTGGGAACTATGAACACCATGAAACATGCACAGTGCTaGCCACTGACATGTGGGCATGGGACAGAAGCAGACAATGCGCAG | + |
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Preference number: 1 (lower is better) Translates to: APGLGTMNTMKHAQC*PLTCGHGTEADNAQ Trigger: CTGCGCATTGTCTGCTTCTGTCCCATGCCCACATGTCAGTGGCCAGCACTGTGCATGTTTCATGGTGTTCATAGTTCCCAGCCCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | GAACTGCTCCCGGTCATCCCGCCACATCTTGGAAGCATCTACGTTTaGTCCACTCTCATCGTTGGGCTCTGCCAGCATGCTCACAACAGA | + |
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Preference number: 1 (lower is better) Translates to: ELLPVIPPHLGSIYV*STLIVGLCQHAHNR Trigger: TCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATGTGGCGGGATGACCGGGAGCAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR CCA 90 bp | CCCAGCCCATCCAGTTCAGAAGGAGCTCCTCTGCTGAGCACCCAGTaGCAGATTCCCTCCAACCCTGACAGCGAACAACAATCTAATCCA | + |
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Preference number: 1 (lower is better) Translates to: PSPSSSEGAPLLSTQ*QIPSNPDSEQQSNP Trigger: TGGATTAGATTGTTGTTCGCTGTCAGGGTTGGAGGGAATCTGCCACTGGGTGCTCAGCAGAGGAGCTCCTTCTGAACTGGATGGGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CCA 90 bp | GCTTGGCGATCTTGTAGAACTGCTCCCGGTCATCCCGCCACATCTTaGAAGCATCTACGTTTGCTCCACTCTCATCGTTGGGCTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: AWRSCRTAPGHPATS*KHLRLLHSHRWALP Trigger: TGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATGTGGCGGGATGACCGGGAGCAGTTCTACAAGATCGCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR GCA 90 bp | AAATACTTTGTTTTGCAAAGAGACTGCCTCTCTTCCTCCCGCACTTaGCAGGGAGGCCTGAGGACAGCGACATGCCCTGTGACCACTCTG | + |
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Preference number: 1 (lower is better) Translates to: KYFVLQRDCLSSSRT*QGGLRTATCPVTTL Trigger: CAGAGTGGTCACAGGGCATGTCGCTGTCCTCAGGCCTCCCTGGCAAGTGCGGGAGGAAGAGAGGCAGTCTCTTTGCAAAACAAAGTATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CCA 90 bp | TCACCCCACACAGACCACTTCCTTACAGAGAGGCCTTCATCTCAGTaGCCTGCAATACTATTTCGGTACAACCCCCTTCCTGCACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SPHTDHFLTERPSSQ*PAILFRYNPLPAPP Trigger: GGGAGGTGCAGGAAGGGGGTTGTACCGAAATAGTATTGCAGGCCACTGAGATGAAGGCCTCTCTGTAAGGAAGTGGTCTGTGTGGGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | AAGCATCTACGTTTGCTCCACTCTCATCGTTGGGCTCTGCCAGCATaGTCACAACAGAAAGCAGGATCTTCTCCACACTCTGCACTGGGC | + |
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Preference number: 1 (lower is better) Translates to: KHLRLLHSHRWALPA*SQQKAGSSPHSALG Trigger: GCCCAGTGCAGAGTGTGGAGAAGATCCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR CCA 90 bp | CCCGCCACATCTTGGAAGCATCTACGTTTGCTCCACTCTCATCGTTaGGCTCTGCCAGCATGCTCACAACAGAAAGCAGGATCTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: PATSWKHLRLLHSHR*ALPACSQQKAGSSP Trigger: TGGAGAAGATCCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATGTGGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR CCA 90 bp | AACTATGAACACCATGAAACATGCACAGTGCTGGCCACTGACATGTaGGCATGGGACAGAAGCAGACAATGCGCAGTGAGATCGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: NYEHHETCTVLATDM*AWDRSRQCAVRSAT Trigger: TGTGGCCGATCTCACTGCGCATTGTCTGCTTCTGTCCCATGCCCACATGTCAGTGGCCAGCACTGTGCATGTTTCATGGTGTTCATAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | TTCATCTCAGTGGCCTGCAATACTATTTCGGTACAACCCCCTTCCTaGACCTCCCAACACCAGACTCTGTTGCGTTTCAAACAGACTGGG | + |
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Preference number: 1 (lower is better) Translates to: FISVACNTISVQPPS*TSQHQTLLRFKQTG Trigger: CCCAGTCTGTTTGAAACGCAACAGAGTCTGGTGTTGGGAGGTGCAGGAAGGGGGTTGTACCGAAATAGTATTGCAGGCCACTGAGATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR GCA 90 bp | CATCTTGGAAGCATCTACGTTTGCTCCACTCTCATCGTTGGGCTCTaGCAGCATGCTCACAACAGAAAGCAGGATCTTCTCCACACTCTG | + |
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Preference number: 1 (lower is better) Translates to: HLGSIYVCSTLIVGL*QHAHNRKQDLLHTL Trigger: CAGAGTGTGGAGAAGATCCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTCAGACCCCCTCCGCTCAAAATGCTTCCTaGGACACCTGGGAACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: VGSARALWLSRSCCQTPSAQNAS*DTWELR Trigger: TCTCAGTTCCCAGGTGTCCCAGGAAGCATTTTGAGC...GGAGGGGGTCTGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR TCA 90 bp | GTTATTGCTTGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTCACCCACACTAAAGCTCTaGCAGTCCCGCCTGTCGGTC | + |
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Preference number: 2 (lower is better) Translates to: VIACGVGSGPVAQQVLLSPTLKL*QSRLSV Trigger: GACCGACAGGCGGGACTGTCAGAGCTTTAGTGTGGG...TGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | GTTATTGCTTGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTCACTGCTGAGCACCCAGTaGCAGATTCCCTCCAACCCT | + |
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Preference number: 2 (lower is better) Translates to: VIACGVGSGPVAQQVLLSLLSTQ*QIPSNP Trigger: AGGGTTGGAGGGAATCTGCCACTGGGTGCTCAGCAG...TGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR TCA 90 bp | GTTATTGCTTGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTCAAAGCAGCAGTCTTGCTaGCCCATGTCCCCTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: VIACGVGSGPVAQQVLLSKQQSC*PMSPLL Trigger: GAGAAGAGGGGACATGGGTCAGCAAGACTGCTGCTT...TGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTGCGTTTCAAACAGACTGGGCTCCCCCGAGAAGGAAAGCACAAGGTGCCTGGCTCAGCAGGTCCTaGTGTCAGACCCCCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SVAFQTDWAPPRRKAQGAWLSRS*CQTPST Trigger: GGTGGAGGGGGTCTGACAGCAGGACCTGCTGAGCCA...GGCACCTTGTGCTTTCCTTCTCGGGGGAGCCCAGTCTGTTTGAAACGCAACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACACAGACCACTTCCTTACAGAGAGGCCTTCATCTCAGTGGCCTGCAATTCGGCTCGGGCCCTGTaGCTCAGCAGGTCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: TPHRPLPYREAFISVACNSARAL*LSRSCC Trigger: ACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGA...ATTGCAGGCCACTGAGATGAAGGCCTCTCTGTAAGGAAGTGGTCTGTGTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CAA 90 bp | TTTAGAAAAGGCCAAGCATCCACCGCACTCCACATCTGTTATTGCTaGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FRKGQASTALHICYC*WGRLGPCGSAGPAV Trigger: GACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAACAGATGTGGAGTGCGGTGGATGCTTGGCCTTTTCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCCACACAGACCACTTCCTTACAGAGAGGCCTTCATCTCAGTGGCCTGCAATGGGACACCTGGGAACTaGGAGGCAGGGACAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: TPHRPLPYREAFISVACNGTPGN*EAGTTG Trigger: GCCTGTTGTCCCTGCCTCTCAGTTCCCAGGTGTCCC...ATTGCAGGCCACTGAGATGAAGGCCTCTCTGTAAGGAAGTGGTCTGTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGGCATGGGACAGAAGCAGACAATGCGCAGTGAGATCGGCCACACACCCCGCTGTGGCTCTGCACTaGCTGTGTTGGTGTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: MWAWDRSRQCAVRSATHPAVALH*LCWCWH Trigger: ATGCCAACACCAACACAGGCAGTGCAGAGCCACAGC...GGGGTGTGTGGCCGATCTCACTGCGCATTGTCTGCTTCTGTCCCATGCCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | CATCACCCCACACAGACCACTTCCTTACAGAGAGGCCTTCATCTCAGTGGCCTGGTGTTGGTGTTGGCATaGCAGCGCTGTCGCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: HHPTQTTSLQRGLHLSGLVLVLA*QRCRHR Trigger: CCTGTGGCGACAGCGCTGCCATGCCAACACCAACAC...CAGGCCACTGAGATGAAGGCCTCTCTGTAAGGAAGTGGTCTGTGTGGGGTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCCCCAGAGACTTCTGGACAATCTGCTTGGCGATCTTGTAGAACTGCTCCTCCACACTCTGCACTaGGCTCCACCGCTCGGCACT | + |
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Preference number: 2 (lower is better) Translates to: SEPQRLLDNLLGDLVELLLHTLH*APPLGT Trigger: AGTGCCGAGCGGTGGAGCCCAGTGCAGAGTGTGGAG...GAGCAGTTCTACAAGATCGCCAAGCAGATTGTCCAGAAGTCTCTGGGGCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR CAA 90 bp | AGAACTGCTCCCGGTCATCCCGCCACATCTTGGAAGCATCTACGTTaGCTCCACTCTCATCGTTGGGCTCTGCCAGCATGCTCACAACAG | + |
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Preference number: 2 (lower is better) Translates to: RTAPGHPATSWKHLR*LHSHRWALPACSQQ Trigger: CTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATGTGGCGGGATGACCGGGAGCAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGCTCCACTCTCATCGTTGGGCTCTGCCAGCATGCTCACAACAGAAAGCAGATCTTCTCCACACTCTaGACTGGGCTCCACCGCTCG | + |
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Preference number: 2 (lower is better) Translates to: VCSTLIVGLCQHAHNRKQIFSTL*TGLHRS Trigger: CGAGCGGTGGAGCCCAGTGCAGAGTGTGGAGAAGAT...CTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR CAA 90 bp | ATTTCGGTACAACCCCCTTCCTGCACCTCCCAACACCAGACTCTGTaGCGTTTCAAACAGACTGGGCTCCCCCGAGAAGGAAAGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: ISVQPPSCTSQHQTL*RFKQTGLPREGKHK Trigger: CTTGTGCTTTCCTTCTCGGGGGAGCCCAGTCTGTTTGAAACGCAACAGAGTCTGGTGTTGGGAGGTGCAGGAAGGGGGTTGTACCGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCAGGGAGGCCTGAGGACAGCGACATGCCCTGTGACCACTCTGTGTGTGGATGTCCCCTCTTCTCATaGACCCATTTACAAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: LPGRPEDSDMPCDHSVCGCPLFS*THLQSI Trigger: GATGCTTTGTAAATGGGTTCATGAGAAGAGGGGACA...TCCACACACAGAGTGGTCACAGGGCATGTCGCTGTCCTCAGGCCTCCCTGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR GCA 90 bp | GCGTTTCAAACAGACTGGGCTCCCCCGAGAAGGAAAGCACAAGGTGCCCACAGGAAGCTTCTGTCACCATaGCAAAGGCAACCTAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: AFQTDWAPPRRKAQGAHRKLLSP*QRQPRL Trigger: AAGCCTAGGTTGCCTTTGGCATGGTGACAGAAGCTT...CCTGTGGGCACCTTGTGCTTTCCTTCTCGGGGGAGCCCAGTCTGTTTGAAACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGATCTTGTAGAACTGCTCCCGGTCATCCCGCCACATCTTGGAAGCATCTACTGGGCTCTGCCAGCATaGTCACAACAGAAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GDLVELLPVIPPHLGSIYWALPA*SQQKAG Trigger: TCCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCA...GTAGATGCTTCCAAGATGTGGCGGGATGACCGGGAGCAGTTCTACAAGATCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGGCAGATTCCCTCCAACCCTGACAGCGAACAACAATCTAATCCAAGAGGAGGTGAGGACCCCATaGCTGAGAGAGGTAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSGRFPPTLTANNNLIQEEVRTP*LREVVR Trigger: CCTCACTACCTCTCTCAGCCATGGGGTCCTCACCTC...CTCTTGGATTAGATTGTTGTTCGCTGTCAGGGTTGGAGGGAATCTGCCACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | CATCACCCCACACAGACCACTTCCTTACAGAGAGGCCTTCATCTCAGTGGCCTGTTAGTATCCAGTCCCTaGCAGACAACAGGACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HHPTQTTSLQRGLHLSGLLVSSP*QTTGQA Trigger: GGCCTGTCCTGTTGTCTGCCAGGGACTGGATACTAA...CAGGCCACTGAGATGAAGGCCTCTCTGTAAGGAAGTGGTCTGTGTGGGGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACTTCTGGACAATCTGCTTGGCGATCTTGTAGAACTGCTCCCGGTCATCCCCTCCACTCTCATCGTTaGGCTCTGCCAGCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: ETSGQSAWRSCRTAPGHPLHSHR*ALPACS Trigger: TGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAG...GGGATGACCGGGAGCAGTTCTACAAGATCGCCAAGCAGATTGTCCAGAAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR CAA 90 bp | TCCCGCCACATCTTGGAAGCATCTACGTTTGCTCCACTCTCATCGTaGGGCTCTGCCAGCATGCTCACAACAGAAAGCAGGATCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SRHILEASTFAPLSS*GSASMLTTESRIFS Trigger: GGAGAAGATCCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATGTGGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCCCTGGAGCCCCAGGGCTGGGAACTATGAACACCATGAAACATGCACAGTGAAAAGAAGCTCAAAATaGTTCCTGGGACACCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: APWSPRAGNYEHHETCTVKRSSK*FLGHLG Trigger: TCCCAGGTGTCCCAGGAAGCATTTTGAGCTTCTTTT...CACTGTGCATGTTTCATGGTGTTCATAGTTCCCAGCCCTGGGGCTCCAGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGGCATGGGACAGAAGCAGACAATGCGCAGTGAGATCGGCCACACACCCCCCACTAACTCAGACATaGATGCAACCAGAAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: MWAWDRSRQCAVRSATHPPLTQT*MQPEKA Trigger: TGCTTTTTCTGGTTGCATCCATGTCTGAGTTAGTGG...GGGGTGTGTGGCCGATCTCACTGCGCATTGTCTGCTTCTGTCCCATGCCCACAT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGGCTATGGTGACATCTGTGACTCATATAGCAAGCTTCTGTCACCATGCTCATTATCCCAGTCATaGTCTAGGGAGCTGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GRGYGDICDSYSKLLSPCSLSQS*SRELPG Trigger: GCCAGGCAGCTCCCTAGATCATGACTGGGATAATGA...GCATGGTGACAGAAGCTTGCTATATGAGTCACAGATGTCACCATAGCCCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTAAGTGCAAAGTGTCAAAAGAAGCTCAAAATGCTTCCTGGGACACCTGGCTGCACTGCCTGTGTTaGTGTTGGCATGGCAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: ASKCKVSKEAQNASWDTWLHCLC*CWHGSA Trigger: AGCGCTGCCATGCCAACACCAACACAGGCAGTGCAG...CCAGGTGTCCCAGGAAGCATTTTGAGCTTCTTTTGACACTTTGCACTTAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| 3UTR CCA 72 bp | ACGGGGGCTGTGGCTCTGCACTGCCTGTGTTGGTGTTaGCATGGCAGCGCTGTCGCCACAGGTTCTCGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TGAVALHCLCWC*HGSAVATGSRA Trigger: TGCTCGAGAACCTGTGGCGACAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCCCCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | AGGACCCCATGGCTGAGAGAGGTAGTGAGGACAGCCTaGGCCCTCCCTGAGGTGCGCACACAACACAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTPWLREVVRTA*ALPEVRTQHSR Trigger: CCTGCTGTGTTGTGTGCGCACCTCAGGGAGGGCCCAGGCTGTCCTCACTACCTCTCTCAGCCATGGGGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | TCCCGCACTTGCCAGGGAGGCCTGAGGACAGCGACATaGCCTGTGACCACTCTGTGTGTGGACATCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRTCQGGLRTAT*PVTTLCVDITP Trigger: TGGGGTGATGTCCACACACAGAGTGGTCACAGGGCATGTCGCTGTCCTCAGGCCTCCCTGGCAAGTGCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | GGCTGTGGCTCTGCACTGCCTGTGTTGGTGTTGGCATaGCAGCGCTGTCGCCACAGGTTCTCGAGCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GCGSALPVLVLA*QRCRHRFSSRV Trigger: CACTCTGCTCGAGAACCTGTGGCGACAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR TCA 72 bp | GTATGCAGGGCCCCCAGGAGACCCACACTAAAGCTCTaGCAGTCCCGCCTGTCGGTCGAGTGTGCACCACTA | + |
|
Preference number: 3 (lower is better) Translates to: VCRAPRRPTLKL*QSRLSVECAPL Trigger: TAGTGGTGCACACTCGACCGACAGGCGGGACTGTCAGAGCTTTAGTGTGGGTCTCCTGGGGGCCCTGCATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | GGAAAGGAAGAAACAACGGGGGCTGTGGCTCTGCACTaGCTGTGTTGGTGTTGGCATGGCAGCGCTGTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: GKEETTGAVALH*LCWCWHGSAVA Trigger: GGCGACAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCCCCCGTTGTTTCTTCCTTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | GGACACCTGGGAACTGAGAGGCAGGGACAACAGGCCTaGACTGCTTTTCCAAGGCCCCATGTCCCAAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GHLGTERQGQQA*TAFPRPHVPRG Trigger: CCCTCTTGGGACATGGGGCCTTGGAAAAGCAGTGCAGGCCTGTTGTCCCTGCCTCTCAGTTCCCAGGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | CAAGCATCCACCGCACTCCACATCTGTTATTGCTTGTaGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QASTALHICYCL*GRLGPCGSAGP Trigger: AGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAACAGATGTGGAGTGCGGTGGATGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACAGTGCTGGCCACTGACATGTGGGCATGGGACAGAAGCAGACAATGCGCAGTCTGCACTGCCTGTGTaGGTGTTGGCATGGCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: AQCWPLTCGHGTEADNAQSALPV*VLAWQR Trigger: GCGCTGCCATGCCAACACCAACACAGGCAGTGCAGA...CTGCGCATTGTCTGCTTCTGTCCCATGCCCACATGTCAGTGGCCAGCACTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR TCA 72 bp | GCTGAGAGAGGTAGTGAGGACAGCCTGGGCCCTCCCTaGGGTGCGCACACAACACAGCAGGAGGAGTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AERGSEDSLGPP*GAHTTQQEESL Trigger: TAAAGACTCCTCCTGCTGTGTTGTGTGCGCACCTCAGGGAGGGCCCAGGCTGTCCTCACTACCTCTCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR TCA 72 bp | TCCCCAGCCCATCCAGTTCAGAAGGAGCTCCTCTGCTaGGCACCCAGTGGCAGATTCCCTCCAACCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SPAHPVQKELLC*APSGRFPPTLT Trigger: TGTCAGGGTTGGAGGGAATCTGCCACTGGGTGCTCAGCAGAGGAGCTCCTTCTGAACTGGATGGGCTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | TGGGTGGAAAGGAAGAAACAACGGGGGCTGTGGCTCTaGACTGCCTGTGTTGGTGTTGGCATGGCAGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WVERKKQRGLWL*TACVGVGMAAL Trigger: CAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCCCCCGTTGTTTCTTCCTTTCCACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | TCTCCACACTCTGCACTGGGCTCCACCGCTCGGCACTaGTCTCATAACCCATGGGATCATCACCTGGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SPHSALGSTARH*SHNPWDHHLEH Trigger: ATGCTCCAGGTGATGATCCCATGGGTTATGAGAGCAGTGCCGAGCGGTGGAGCCCAGTGCAGAGTGTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
||
| 3UTR CCA 72 bp | CTGGCTTGGGTGGAAAGGAAGAAACAACGGGGGCTGTaGCTCTGCACTGCCTGTGTTGGTGTTGGCATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LAWVERKKQRGL*LCTACVGVGMA Trigger: TGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCCCCCGTTGTTTCTTCCTTTCCACCCAAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | ATGTCCCAAGAGGGAGCAGCATTAGTATCCAGTCCCTaGCAGACAACAGGACAGGCCCTCGGCACTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MSQEGAALVSSP*QTTGQALGTAG Trigger: TCCTGCAGTGCCGAGGGCCTGTCCTGTTGTCTGCCAGGGACTGGATACTAATGCTGCTCCCTCTTGGGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | AGCCCCAGGGCTGGGAACTATGAACACCATGAAACATaGACAGTGCTGGCCACTGACATGTGGGCATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SPRAGNYEHHET*TVLATDMWAWD Trigger: GTCCCATGCCCACATGTCAGTGGCCAGCACTGTGCATGTTTCATGGTGTTCATAGTTCCCAGCCCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | CTCCCAACACCAGACTCTGTTGCGTTTCAAACAGACTaGGCTCCCCCGAGAAGGAAAGCACAAGGTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LPTPDSVAFQTD*APPRRKAQGAH Trigger: GTGGGCACCTTGTGCTTTCCTTCTCGGGGGAGCCCAGTCTGTTTGAAACGCAACAGAGTCTGGTGTTGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | CATTATCCCAGTCATGATCTAGGGAGCTGCCTGGCTTaGGTGGAAAGGAAGAAACAACGGGGGCTGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HYPSHDLGSCLA*VERKKQRGLWL Trigger: GAGCCACAGCCCCCGTTGTTTCTTCCTTTCCACCCAAGCCAGGCAGCTCCCTAGATCATGACTGGGATAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | TCCAGTTCAGAAGGAGCTCCTCTGCTGAGCACCCAGTaGCAGATTCCCTCCAACCCTGACAGCGAACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSEGAPLLSTQ*QIPSNPDSEQQ Trigger: TTGTTGTTCGCTGTCAGGGTTGGAGGGAATCTGCCACTGGGTGCTCAGCAGAGGAGCTCCTTCTGAACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | GGGCTGGGAACTATGAACACCATGAAACATGCACAGTaGTGGCCACTGACATGTGGGCATGGGACAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLGTMNTMKHAQ*WPLTCGHGTEA Trigger: TGCTTCTGTCCCATGCCCACATGTCAGTGGCCAGCACTGTGCATGTTTCATGGTGTTCATAGTTCCCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | GTGTCAAAAGAAGCTCAAAATGCTTCCTGGGACACCTaGGAACTGAGAGGCAGGGACAACAGGCCTGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: VSKEAQNASWDT*ELRGRDNRPAL Trigger: CAGTGCAGGCCTGTTGTCCCTGCCTCTCAGTTCCCAGGTGTCCCAGGAAGCATTTTGAGCTTCTTTTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | CACCATGAAACATGCACAGTGCTGGCCACTGACATGTaGGCATGGGACAGAAGCAGACAATGCGCAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HHETCTVLATDM*AWDRSRQCAVR Trigger: TCTCACTGCGCATTGTCTGCTTCTGTCCCATGCCCACATGTCAGTGGCCAGCACTGTGCATGTTTCATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR TCA 72 bp | TCTTTAGCAGCGCAGCAGCTGTCATTATCCCAGTCATaGTCTAGGGAGCTGCCTGGCTTGGGTGGAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLAAQQLSLSQS*SRELPGLGGKE Trigger: TTCCTTTCCACCCAAGCCAGGCAGCTCCCTAGATCATGACTGGGATAATGACAGCTGCTGCGCTGCTAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | CCACTTCCTTACAGAGAGGCCTTCATCTCAGTGGCCTaGAATACTATTTCGGTACAACCCCCTTCCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PLPYREAFISVA*NTISVQPPSCT Trigger: GGTGCAGGAAGGGGGTTGTACCGAAATAGTATTGCAGGCCACTGAGATGAAGGCCTCTCTGTAAGGAAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | CGTTTGCTCCACTCTCATCGTTGGGCTCTGCCAGCATaGTCACAACAGAAAGCAGGATCTTCTCCACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLLHSHRWALPA*SQQKAGSSPHS Trigger: AGAGTGTGGAGAAGATCCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
||
| 3UTR CCA 72 bp | CTGGGAACTATGAACACCATGAAACATGCACAGTGCTaGCCACTGACATGTGGGCATGGGACAGAAGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGTMNTMKHAQC*PLTCGHGTEAD Trigger: GTCTGCTTCTGTCCCATGCCCACATGTCAGTGGCCAGCACTGTGCATGTTTCATGGTGTTCATAGTTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | TCTTGTAGAACTGCTCCCGGTCATCCCGCCACATCTTaGAAGCATCTACGTTTGCTCCACTCTCATCGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCRTAPGHPATS*KHLRLLHSHRW Trigger: CCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATGTGGCGGGATGACCGGGAGCAGTTCTACAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
||
| 3UTR GCA 72 bp | GTGGCCTGCAATACTATTTCGGTACAACCCCCTTCCTaGACCTCCCAACACCAGACTCTGTTGCGTTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VACNTISVQPPS*TSQHQTLLRFK Trigger: TTTGAAACGCAACAGAGTCTGGTGTTGGGAGGTGCAGGAAGGGGGTTGTACCGAAATAGTATTGCAGGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CCA 72 bp | ACAGACCACTTCCTTACAGAGAGGCCTTCATCTCAGTaGCCTGCAATACTATTTCGGTACAACCCCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TDHFLTERPSSQ*PAILFRYNPLP Trigger: AGGAAGGGGGTTGTACCGAAATAGTATTGCAGGCCACTGAGATGAAGGCCTCTCTGTAAGGAAGTGGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR TCA 72 bp | AGACATGGATGCAACCAGAAAAAGCAGCAGTCTTGCTaGCCCATGTCCCCTCTTCTCATGAACCCATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: RHGCNQKKQQSC*PMSPLLMNPFT Trigger: TGTAAATGGGTTCATGAGAAGAGGGGACATGGGTCAGCAAGACTGCTGCTTTTTCTGGTTGCATCCATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR GCA 72 bp | GACATCTGTGACTCATATAGCAAGCTTCTGTCACCATaGCAAAGGCAACCTAGGCTTCTAAGTGCAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: DICDSYSKLLSP*QRQPRLLSAKC Trigger: ACACTTTGCACTTAGAAGCCTAGGTTGCCTTTGGCATGGTGACAGAAGCTTGCTATATGAGTCACAGATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCAGACAACAGGACAGGCCCTCGGCACTGCAGGAAGGAGCAGAGGTGAGATCTTCTCCACACTCTaGACTGGGCTCCACCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PWQTTGQALGTAGRSRGEIFSTL*TGLHRS Trigger: CGAGCGGTGGAGCCCAGTGCAGAGTGTGGAGAAGAT...CTCACCTCTGCTCCTTCCTGCAGTGCCGAGGGCCTGTCCTGTTGTCTGCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR CCA 90 bp | GACTGGGCTCCCCCGAGAAGGAAAGCACAAGGTGCCCACAGGTGCCCCCTGGAGCAAGGGGTAGTCAAGTaGGAAACTCAGGATGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DWAPPRRKAQGAHRCPLEQGVVK*ETQDGG Trigger: CCCGCCATCCTGAGTTTCCCACTTGACTACCCCTTG...CTCCAGGGGGCACCTGTGGGCACCTTGTGCTTTCCTTCTCGGGGGAGCCCAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CAA 72 bp | GGCCAAGCATCCACCGCACTCCACATCTGTTATTGCTaGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQASTALHICYC*WGRLGPCGSAG Trigger: ACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAACAGATGTGGAGTGCGGTGGATGCTTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CAA 72 bp | AGAAACAACGGGGGCTGTGGCTCTGCACTGCCTGTGTaGGTGTTGGCATGGCAGCGCTGTCGCCACAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNNGGCGSALPV*VLAWQRCRHRF Trigger: GAACCTGTGGCGACAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGAGCCACAGCCCCCGTTGTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTGCTTGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTCACTCCACTCTCATCGTTaGGCTCTGCCAGCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIACGVGSGPVAQQVLLSLHSHR*ALPACS Trigger: TGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAG...TGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR GCA 90 bp | GACTGGGCTCCCCCGAGAAGGAAAGCACAAGGTGCCCACAGGTGCCCCCTGGAGTGGAGATGCAGACTCTaGCATCAGGATAGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DWAPPRRKAQGAHRCPLEWRCRL*HQDRCW Trigger: CCAACATCTATCCTGATGGCAGAGTCTGCATCTCCA...CTCCAGGGGGCACCTGTGGGCACCTTGTGCTTTCCTTCTCGGGGGAGCCCAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR CCA 90 bp | GTTATTGCTTGTGGGGTCGGCTCGGGCCCTGTGGCTCAGCAGGTCCTGCTGTCACTGGAGCATGCAGGATaGAGATGCAGACTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VIACGVGSGPVAQQVLLSLEHAG*RCRLCH Trigger: ATGGCAGAGTCTGCATCTCCATCCTGCATGCTCCAG...TGACAGCAGGACCTGCTGAGCCACAGGGCCCGAGCCGACCCCACAAGCAATAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAGCCCATCCAGTTCAGAAGGAGCTCCTCTGCTGAGCACCCAGTGGCAGAGCCCCAGAGACTTCTaGACAATCTGCTTGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPSSSEGAPLLSTQWQSPRDF*TICLAI Trigger: GATCGCCAAGCAGATTGTCCAGAAGTCTCTGGGGCT...CTGCCACTGGGTGCTCAGCAGAGGAGCTCCTTCTGAACTGGATGGGCTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CAA 72 bp | CCCGGTCATCCCGCCACATCTTGGAAGCATCTACGTTaGCTCCACTCTCATCGTTGGGCTCTGCCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGHPATSWKHLR*LHSHRWALPAC Trigger: GCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGATGTGGCGGGATGACCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGGCCCCATGTCCCAAGAGGGAGCAGCATTAGTATCCAGTCCCTGGCAGACTGGGCTCTGCCAGCATaGTCACAACAGAAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRPHVPRGSSISIQSLADWALPA*SQQKAG Trigger: TCCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCA...GTCTGCCAGGGACTGGATACTAATGCTGCTCCCTCTTGGGACATGGGGCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR TCA 90 bp | GCGTTTCAAACAGACTGGGCTCCCCCGAGAAGGAAAGCACAAGGTGCCCACAGGTGTCTTCAGGGCCCATaGTCAATGCCTCCCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AFQTDWAPPRRKAQGAHRCLQGP*SMPPIQ Trigger: TTGAATGGGAGGCATTGATCATGGGCCCTGAAGACA...CCTGTGGGCACCTTGTGCTTTCCTTCTCGGGGGAGCCCAGTCTGTTTGAAACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCCAGCCCATCCAGTTCAGAAGGAGCTCCTCTGCTGAGCACCCAGTGGCAGGGATTCAGGGTTAATTaGTTATACTCGGCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPSSSEGAPLLSTQWQGFRVN*LYSAIS Trigger: GCTGATGGCCGAGTATAAGCAATTAACCCTGAATCC...CTGCCACTGGGTGCTCAGCAGAGGAGCTCCTTCTGAACTGGATGGGCTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATCTTCTCCACACTCTGCACTGGGCTCCACCGCTCGGCACTGCTCTCATAGGATTCAGGGTTAATTaGTTATACTCGGCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDLLHTLHWAPPLGTALIGFRVN*LYSAIS Trigger: GCTGATGGCCGAGTATAAGCAATTAACCCTGAATCC...TATGAGAGCAGTGCCGAGCGGTGGAGCCCAGTGCAGAGTGTGGAGAAGATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGGGCATGGGACAGAAGCAGACAATGCGCAGTGAGATCGGCCACACACCCCCATCAGGATAGATGTTaGGATGGAACATCTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MWAWDRSRQCAVRSATHPHQDRC*DGTSHR Trigger: CCTGTGAGATGTTCCATCCCAACATCTATCCTGATG...GGGGTGTGTGGCCGATCTCACTGCGCATTGTCTGCTTCTGTCCCATGCCCACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| 3UTR CAA 72 bp | ATCTTGGAAGCATCTACGTTTGCTCCACTCTCATCGTaGGGCTCTGCCAGCATGCTCACAACAGAAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILEASTFAPLSS*GSASMLTTESR Trigger: CCTGCTTTCTGTTGTGAGCATGCTGGCAGAGCCCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCAACCTAGGCTTCTAAGTGCAAAGTGTCAAAAGAAGCTCAAAATGCTTCTCCACACTCTGCACTaGGCTCCACCGCTCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QRQPRLLSAKCQKKLKMLLHTLH*APPLGT Trigger: AGTGCCGAGCGGTGGAGCCCAGTGCAGAGTGTGGAG...AAGCATTTTGAGCTTCTTTTGACACTTTGCACTTAGAAGCCTAGGTTGCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTAAGTGCAAAGTGTCAAAAGAAGCTCAAAATGCTTCCTGGGACACCTGGGGAACATCTCACAGGTaGATCTCATCTTCGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKCKVSKEAQNASWDTWGTSHR*ISSSEG Trigger: GCCCTCCGAAGATGAGATTCACCTGTGAGATGTTCC...CCAGGTGTCCCAGGAAGCATTTTGAGCTTCTTTTGACACTTTGCACTTAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCCCCAGAGACTTCTGGACAATCTGCTTGGCGATCTTGTAGAACTGCTCAATTCTCTTCATTCATaGGGCCTGCCACGATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEPQRLLDNLLGDLVELLNSLHS*GLPRFL Trigger: AAGGAATCGTGGCAGGCCCCATGAATGAAGAGAATT...GAGCAGTTCTACAAGATCGCCAAGCAGATTGTCCAGAAGTCTCTGGGGCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174546.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCAACCTAGGCTTCTAAGTGCAAAGTGTCAAAAGAAGCTCAAAATGCTTGTGGGAAACTCAGGATaGCGGGAAAAACACCAAACT | + |
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Preference number: 4 (lower is better) Translates to: QRQPRLLSAKCQKKLKMLVGNSG*REKHQT Trigger: AGTTTGGTGTTTTTCCCGCCATCCTGAGTTTCCCAC...AAGCATTTTGAGCTTCTTTTGACACTTTGCACTTAGAAGCCTAGGTTGCCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| CDS-3UTR CCA 90 bp | CAAAGGCAACCTAGGCTTCTAAGTGCAAAGTGTCAAAAGAAGCTCAAAATGCTTAATTCTCTTCATTCATaGGGCCTGCCACGATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QRQPRLLSAKCQKKLKMLNSLHS*GLPRFL Trigger: AAGGAATCGTGGCAGGCCCCATGAATGAAGAGAATT...AAGCATTTTGAGCTTCTTTTGACACTTTGCACTTAGAAGCCTAGGTTGCCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGCCCTCCCTGAGGTGCGCACACAACACAGCAGGAGGAGTCTTTAGCAGCTGGAAGCATCTACGTTaGCTCCACTCTCATCGTTGG | + |
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Preference number: 5 (lower is better) Translates to: PGPSLRCAHNTAGGVFSSWKHLR*LHSHRW Trigger: CCAACGATGAGAGTGGAGCAAACGTAGATGCTTCCA...GCTGCTAAAGACTCCTCCTGCTGTGTTGTGTGCGCACCTCAGGGAGGGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| CDS GCA 90 bp | CAAGTGTCTTCAGGGCCCCAAAGAATAAAAGCCCAGCCAGTTCTCTaGCAGAACAGCAGGGTGAGACAAACCCACAGGAGGACAGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: QVSSGPQRIKAQPVL*QNSRVRQTHRRTVN Trigger: ATTAACTGTCCTCCTGTGGGTTTGTCTCACCCTGCTGTTCTGGCAGAGAACTGGCTGGGCTTTTATTCTTTGGGGCCCTGAAGACACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172772.2 |
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| CDS CCA 90 bp | CACTGCTCTCATAACCCATGGGATCATCACCTGGAGCATGCAGGATaGAGATGCAGACTCTGCCATCAGGATAGATGTTGGGATGGAACA | + |
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Preference number: 5 (lower is better) Translates to: HCSHNPWDHHLEHAG*RCRLCHQDRCWDGT Trigger: TGTTCCATCCCAACATCTATCCTGATGGCAGAGTCTGCATCTCCATCCTGCATGCTCCAGGTGATGATCCCATGGGTTATGAGAGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172813.2 ENSMUST00000174510.8 |
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| CDS CCA 72 bp | GAATCTCATCTTCGGAGGGCTCAAGGGGTAGTCAAGTaGGAAACTCAGGATGGCGGGAAAAACACCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: ESHLRRAQGVVK*ETQDGGKNTKL Trigger: GAGTTTGGTGTTTTTCCCGCCATCCTGAGTTTCCCACTTGACTACCCCTTGAGCCCTCCGAAGATGAGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| CDS CCA 72 bp | CATAACCCATGGGATCATCACCTGGAGCATGCAGGATaGAGATGCAGACTCTGCCATCAGGATAGATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: HNPWDHHLEHAG*RCRLCHQDRCW Trigger: CCAACATCTATCCTGATGGCAGAGTCTGCATCTCCATCCTGCATGCTCCAGGTGATGATCCCATGGGTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172813.2 ENSMUST00000174510.8 |
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| CDS TCA 72 bp | CATCAGGATAGATGTTGGGATGGAACATCTCACAGGTaGATCTCATCTTCGGAGGGCTCAAGGGGTAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: HQDRCWDGTSHR*ISSSEGSRGSQ Trigger: TTGACTACCCCTTGAGCCCTCCGAAGATGAGATTCACCTGTGAGATGTTCCATCCCAACATCTATCCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174510.8 |
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| CDS CAA 72 bp | AGGGTGAGACAAACCCACAGGAGGACAGTTAATTCCTaGATAGATGTTCTAAGAACATTTGTAAACGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RVRQTHRRTVNS*IDVLRTFVNGL Trigger: GAGGCCGTTTACAAATGTTCTTAGAACATCTATCAAGGAATTAACTGTCCTCCTGTGGGTTTGTCTCACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172772.2 |
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