Pregenerated sensors for UBE2G1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020794Ensembl transcript IDs: ENSMUST00000021148.13, ENSMUST00000138247.8
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTACACTGCCATGGCCATGAGATTTTCAAGTATTAAGTTTGTTTaGATAAGGAATCAACCTGAGATTTTTCTAAACTGCACTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: EYTAMAMRFSSIKFV*IRNQPEIFLNCTSL Trigger: CAGAGAAGTGCAGTTTAGAAAAATCTCAGGTTGATTCCTTATGCAAACAAACTTAATACTTGAAAATCTCATGGCCATGGCAGTGTACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR GCA 90 bp | TACTACTTGTTGAGCGGTCAAACCCTGGATTTTAATTCAACAGACTaGTTGAATCACAACAATAGATCAAAAATCCAACTCCACATTTGT | + |
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Preference number: 1 (lower is better) Translates to: YYLLSGQTLDFNSTD*LNHNNRSKIQLHIC Trigger: ACAAATGTGGAGTTGGATTTTTGATCTATTGTTGTGATTCAAGCAGTCTGTTGAATTAAAATCCAGGGTTTGACCGCTCAACAAGTAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCGTTTCATGTGTAGCAAATGGTCAGGGCACCATGAGGGAAACGAAGGGAAAAGTGCACTATGTCAGTaGCAGAGTCTGAATGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ARFMCSKWSGHHEGNEGKSALCQ*QSLNVS Trigger: GCTGACATTCAGACTCTGTCACTGACATAGTGCACT...TTTCCCTTCGTTTCCCTCATGGTGCCCTGACCATTTGCTACACATGAAACGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATTCCACCAACTAGAGACCAGACAATGATACATAGGCACCAAGACCCAAAGACTGGCATGTTTTATTaGAGCCCAGTTCCAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: AIPPTRDQTMIHRHQDPKTGMFY*SPVPAR Trigger: TCTGGCTGGAACTGGGCTGCAATAAAACATGCCAGT...CTTTGGGTCTTGGTGCCTATGTATCATTGTCTGGTCTCTAGTTGGTGGAATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGGTCATAGCCACATCTTaGTCCATTTCCCCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: TNDDVLLGEMPPGLVPPEVIATS*SISPLL Trigger: AAGCAGAGGGGAAATGGATCAAGATGTGGCTATGAC...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCGTTTCATGTGTAGCAAATGGTCAGGGCACCATGAGGGAAACGAAGGGAAACAAAGGACTCTCCTCTaGAACACCTTCAGATTTAAA | + |
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Preference number: 2 (lower is better) Translates to: ARFMCSKWSGHHEGNEGKQRTLL*NTFRFK Trigger: TTTAAATCTGAAGGTGTTCCAGAGGAGAGTCCTTTG...TTTCCCTTCGTTTCCCTCATGGTGCCCTGACCATTTGCTACACATGAAACGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGTGGAAGCAACCACTGTaGGAACAATTTCTGACGGTC | + |
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Preference number: 2 (lower is better) Translates to: TNDDVLLGEMPPGLVPPEWKQPL*EQFLTV Trigger: GACCGTCAGAAATTGTTCCCACAGTGGTTGCTTCCA...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGGTTCCAGCCAGAGCTTaGCAACTTATTACAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: TNDDVLLGEMPPGLVPPEVPARA*QLITTE Trigger: TTCTGTTGTAATAAGTTGGCAAGCTCTGGCTGGAAC...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTGGGCTCCAACAAAACTaGGGTGTTCACAGTTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: PKETQGYPKVNKYITVPLGLQQN*GVHSCS Trigger: GGAGCAACTGTGAACACCTCAGTTTTGTTGGAGCCC...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | CACACCTATTCTCGCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCGTGCAGGAAAAACAGTaGCATGTTTCTCAATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HTYSRTQTASSDKYCFMLVQEKQ*HVSQLE Trigger: CTCCAATTGAGAAACATGGCACTGTTTTTCCTGCAC...GAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGCGAGAATAGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | TTATGCTCTCTAGCTCTTGTATACCAAACACAACTTCCCATCTCAGCTAAAACCAATAGGTGGGTAGAGTaGAGGAAAAACAGTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: LCSLALVYQTQLPISAKTNRWVE*RKNSAM Trigger: CATGGCACTGTTTTTCCTGCACTCTACCCACCTATT...GGTTTTAGCTGAGATGGGAAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATTCCACCAACTAGAGACCAGACAATGATACATAGGCACCAAGACCCAAAGGTAATCATCTTTAGTTaGCACTTGTTAGGCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: AIPPTRDQTMIHRHQDPKVIIFS*HLLGSC Trigger: ACAAGAGCCTAACAAGTGCCAACTAAAGATGATTAC...CTTTGGGTCTTGGTGCCTATGTATCATTGTCTGGTCTCTAGTTGGTGGAATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGCAAAGGACTCTCCTCTaGAACACCTTCAGATTTAAA | + |
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Preference number: 2 (lower is better) Translates to: TNDDVLLGEMPPGLVPPEQRTLL*NTFRFK Trigger: TTTAAATCTGAAGGTGTTCCAGAGGAGAGTCCTTTG...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGCATAAGGAATCAACCTaGGATTTTTCTAAACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: TNDDVLLGEMPPGLVPPEHKEST*DFSKLH Trigger: GTGCAGTTTAGAAAAATCTCAGGTTGATTCCTTATG...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | CACACCTATTCTCGCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCACACTGCCATGGCCATaGGATTTTCAAGTATTAAGT | + |
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Preference number: 2 (lower is better) Translates to: HTYSRTQTASSDKYCFMLTLPWP*DFQVLS Trigger: ACTTAATACTTGAAAATCTCATGGCCATGGCAGTGT...GAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGCGAGAATAGGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTATACCAAACACAACTTGTCAGTGACAGAGTCTaGATGTCAGCTAGCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: QVTSTVLCSLALVYQTQLVSDRV*MSASKG Trigger: TCCTTTGCTAGCTGACATTCAGACTCTGTCACTGAC...AAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTACACTGCCATGGCCATGAGATTTTCAAGTATTAAGTTTGTTTGCATAAGGAATAGGTGGGTAGAGTaGAGGAAAAACAGTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: EYTAMAMRFSSIKFVCIRNRWVE*RKNSAM Trigger: CATGGCACTGTTTTTCCTGCACTCTACCCACCTATT...CCTTATGCAAACAAACTTAATACTTGAAAATCTCATGGCCATGGCAGTGTACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTAAGAAGAAACAAATATGGACTAAGGAGAAGGGTAATAGGACAAATAGCAACTGGCATGTTTTATTaGAGCCCAGTTCCAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: AVRRNKYGLRRRVIGQIATGMFY*SPVPAR Trigger: TCTGGCTGGAACTGGGCTGCAATAAAACATGCCAGT...TGCTATTTGTCCTATTACCCTTCTCCTTAGTCCATATTTGTTTCTTCTTACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGATCCGGATCATGTTGTaGTATGTACATGTCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: TNDDVLLGEMPPGLVPPEIRIML*YVHVFT Trigger: TGTAAAGACATGTACATAGCACAACATGATCCGGAT...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTAACACTGCCATGGCCATaGGATTTTCAAGTATTAAGT | + |
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Preference number: 2 (lower is better) Translates to: ALKQHQVTSTVLCSLALVTLPWP*DFQVLS Trigger: ACTTAATACTTGAAAATCTCATGGCCATGGCAGTGT...TACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | CACACCTATTCTCGCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCATCCGGATCATGTTGTaGTATGTACATGTCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: HTYSRTQTASSDKYCFMLIRIML*YVHVFT Trigger: TGTAAAGACATGTACATAGCACAACATGATCCGGAT...GAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGCGAGAATAGGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR TCA 90 bp | TTATGCTCTCTAGCTCTTGTATACCAAACACAACTTCCCATCTCAGCTAAAACCCATAAGGAATCAACCTaGGATTTTTCTAAACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LCSLALVYQTQLPISAKTHKEST*DFSKLH Trigger: GTGCAGTTTAGAAAAATCTCAGGTTGATTCCTTATG...GGTTTTAGCTGAGATGGGAAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR CAA 90 bp | TACTTGTTGAGCGGTCAAACCCTGGATTTTAATTCAACAGACTGCTaGAATCACAACAATAGATCAAAAATCCAACTCCACATTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: YLLSGQTLDFNSTDC*NHNNRSKIQLHICG Trigger: TCCACAAATGTGGAGTTGGATTTTTGATCTATTGTTGTGATTCAAGCAGTCTGTTGAATTAAAATCCAGGGTTTGACCGCTCAACAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTGTGCAGGAAAAACAGTaGCATGTTTCTCAATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PKETQGYPKVNKYITVPLVQEKQ*HVSQLE Trigger: CTCCAATTGAGAAACATGGCACTGTTTTTCCTGCAC...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | GCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTAGAGATTTTTCTAAACTaGACTTCTCTGGTATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: ALKQHQVTSTVLCSLALVEIFLN*TSLVFS Trigger: ACTGAATACCAGAGAAGTGCAGTTTAGAAAAATCTC...TACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTACACTGCCATGGCCATGAGATTTTCAAGTATTAAGTTTGTTTGCATAAGGGTAATCATCTTTAGTTaGCACTTGTTAGGCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: EYTAMAMRFSSIKFVCIRVIIFS*HLLGSC Trigger: ACAAGAGCCTAACAAGTGCCAACTAAAGATGATTAC...CCTTATGCAAACAAACTTAATACTTGAAAATCTCATGGCCATGGCAGTGTACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | TTATGCTCTCTAGCTCTTGTATACCAAACACAACTTCCCATCTCAGCTAAAACCTACAAGGTGTGTTTGTaGATGTACATGAACAGTATA | + |
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Preference number: 2 (lower is better) Translates to: LCSLALVYQTQLPISAKTYKVCL*MYMNSI Trigger: TATACTGTTCATGTACATCCACAAACACACCTTGTA...GGTTTTAGCTGAGATGGGAAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTATAACTCTTCTAGTCTaGGGTGGAAAACAGCTATCT | + |
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Preference number: 2 (lower is better) Translates to: PKETQGYPKVNKYITVPLITLLV*GGKQLS Trigger: AGATAGCTGTTTTCCACCCCAGACTAGAAGAGTTAT...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTAAAATCACATCTAAGTaGACTATGTCAGTGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: PKETQGYPKVNKYITVPLKITSK*TMSVTE Trigger: CTCTGTCACTGACATAGTGCACTTAGATGTGATTTT...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTATACCAAACACAACTTACTTTTCATCCTTATTaGTTTTCACCTGACATGCTT | + |
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Preference number: 2 (lower is better) Translates to: QVTSTVLCSLALVYQTQLTFHPY*FSPDML Trigger: AAGCATGTCAGGTGAAAACCAATAAGGATGAAAAGT...AAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTTTTCATTCCCTCTTCTaGCAAAAGATTTATCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PKETQGYPKVNKYITVPLFHSLF*QKIYPN Trigger: GTTTGGATAAATCTTTTGGCAGAAGAGGGAATGAAA...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTTACAAGGTGTGTTTGTaGATGTACATGAACAGTATA | + |
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Preference number: 2 (lower is better) Translates to: PKETQGYPKVNKYITVPLYKVCL*MYMNSI Trigger: TATACTGTTCATGTACATCCACAAACACACCTTGTA...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCGTTTCATGTGTAGCAAATGGTCAGGGCACCATGAGGGAAACGAAGGGAAAAATCCAACTCCACATTaGTGGAAGCAACCACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: ARFMCSKWSGHHEGNEGKNPTPH*WKQPLW Trigger: CCACAGTGGTTGCTTCCACAAATGTGGAGTTGGATT...TTTCCCTTCGTTTCCCTCATGGTGCCCTGACCATTTGCTACACATGAAACGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | GCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTAGACTGGCATGTTTTATaGCAGCCCAGTTCCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ALKQHQVTSTVLCSLALVDWHVL*QPSSSQ Trigger: CTGGCTGGAACTGGGCTGCAATAAAACATGCCAGTC...TACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGAATCCAACTCCACATTaGTGGAAGCAACCACTGTGG | + |
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Preference number: 3 (lower is better) Translates to: TNDDVLLGEMPPGLVPPENPTPH*WKQPLW Trigger: CCACAGTGGTTGCTTCCACAAATGTGGAGTTGGATT...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTACACTGCCATGGCCATGAGATTTTCAAGTATTAAGTTTGTTTGCATAAGGGACTGGCATGTTTTATaGCAGCCCAGTTCCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: EYTAMAMRFSSIKFVCIRDWHVL*QPSSSQ Trigger: CTGGCTGGAACTGGGCTGCAATAAAACATGCCAGTC...CCTTATGCAAACAAACTTAATACTTGAAAATCTCATGGCCATGGCAGTGTACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCGTTTCATGTGTAGCAAATGGTCAGGGCACCATGAGGGAAACGAAGGGAAAATTATCCGGATCATGTaGTGCTATGTACATGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: ARFMCSKWSGHHEGNEGKIIRIM*CYVHVF Trigger: AAAGACATGTACATAGCACAACATGATCCGGATAAT...TTTCCCTTCGTTTCCCTCATGGTGCCCTGACCATTTGCTACACATGAAACGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR CCA 72 bp | AAAAATCCAACTCCACATTTGTGGAAGCAACCACTGTaGGAACAATTTCTGACGGTCCCTTATAGGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: KNPTPHLWKQPL*EQFLTVPYRRT Trigger: TGTCCTCCTATAAGGGACCGTCAGAAATTGTTCCCACAGTGGTTGCTTCCACAAATGTGGAGTTGGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR TCA 72 bp | CCAAGACCCAAAGGGGGCAGGTTTGTAGAGAATGAATaGGCTCATATAAAATTTCACAATTGGGACCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: PRPKGGRFVENE*AHIKFHNWDQR Trigger: CCTTTGGTCCCAATTGTGAAATTTTATATGAGCTCATTCATTCTCTACAAACCTGCCCCCTTTGGGTCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | CACACCTATTCTCGCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCATCTTTAGTTGGCACTaGTTAGGCTCTTGTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: HTYSRTQTASSDKYCFMLIFSWH*LGSCQH Trigger: ATGCTGACAAGAGCCTAACAAGTGCCAACTAAAGAT...GAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGCGAGAATAGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | GCAATTCCACCAACTAGAGACCAGACAATGATACATAGGCACCAAGACCCAAAGACAAGAAAGCATTATTaGGTACAAGGTGTGTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: AIPPTRDQTMIHRHQDPKTRKHY*VQGVFV Trigger: CACAAACACACCTTGTACCAAATAATGCTTTCTTGT...CTTTGGGTCTTGGTGCCTATGTATCATTGTCTGGTCTCTAGTTGGTGGAATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTATACCAAACACAACTTGCACTTGTTAGGCTCTaGTCAGCATTAATGACTGGC | + |
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Preference number: 3 (lower is better) Translates to: QVTSTVLCSLALVYQTQLALVRL*SALMTG Trigger: GCCAGTCATTAATGCTGACAAGAGCCTAACAAGTGC...AAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | GCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTAATCTTTAGTTGGCACTaGTTAGGCTCTTGTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: ALKQHQVTSTVLCSLALVIFSWH*LGSCQH Trigger: ATGCTGACAAGAGCCTAACAAGTGCCAACTAAAGAT...TACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | ACTAATGATGATGTATTACTGGGAGAAATGCCTCCTGGTTTAGTGCCACCTGAGGAAAACTTTAAAATGTaGCTGTGTCATAGCCACATC | + |
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Preference number: 3 (lower is better) Translates to: TNDDVLLGEMPPGLVPPEENFKM*LCHSHI Trigger: GATGTGGCTATGACACAGCAACATTTTAAAGTTTTC...CTCAGGTGGCACTAAACCAGGAGGCATTTCTCCCAGTAATACATCATCATTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGTAAGAAGAAACAAATATGGACTAAGGAGAAGGGTAATAGGACAAATAGCAAGTTCCAGCCAGAGCTaGCCAACTTATTACAACAGA | + |
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Preference number: 3 (lower is better) Translates to: AVRRNKYGLRRRVIGQIASSSQS*PTYYNR Trigger: TCTGTTGTAATAAGTTGGCAAGCTCTGGCTGGAACT...TGCTATTTGTCCTATTACCCTTCTCCTTAGTCCATATTTGTTTCTTCTTACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTAGTTCCAGCCAGAGCTaGCCAACTTATTACAACAGA | + |
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Preference number: 3 (lower is better) Translates to: PKETQGYPKVNKYITVPLSSSQS*PTYYNR Trigger: TCTGTTGTAATAAGTTGGCAAGCTCTGGCTGGAACT...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | TTATGCTCTCTAGCTCTTGTATACCAAACACAACTTCCCATCTCAGCTAAAACCACAAGAAAGCATTATTaGGTACAAGGTGTGTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LCSLALVYQTQLPISAKTTRKHY*VQGVFV Trigger: CACAAACACACCTTGTACCAAATAATGCTTTCTTGT...GGTTTTAGCTGAGATGGGAAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTATACCAAACACAACTTATTATCCGGATCATGTaGTGCTATGTACATGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: QVTSTVLCSLALVYQTQLIIRIM*CYVHVF Trigger: AAAGACATGTACATAGCACAACATGATCCGGATAAT...AAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR CCA 72 bp | CTACAAGAAAGCATTATTTGGTACAAGGTGTGTTTGTaGATGTACATGAACAGTATATATATTATCCGGATC | + |
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Preference number: 3 (lower is better) Translates to: LQESIIWYKVCL*MYMNSIYIIRI Trigger: GATCCGGATAATATATATACTGTTCATGTACATCCACAAACACACCTTGTACCAAATAATGCTTTCTTGTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| CDS-3UTR TCA 90 bp | GCAATTCCACCAACTAGAGACCAGACAATGATACATAGGCACCAAGACCCAAAGATCTACATTTGCAGGTaGGTCTCCATTAGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: AIPPTRDQTMIHRHQDPKIYICR*VSIRIC Trigger: GCAGATCCTAATGGAGACTCACCTGCAAATGTAGAT...CTTTGGGTCTTGGTGCCTATGTATCATTGTCTGGTCTCTAGTTGGTGGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| CDS-3UTR CCA 90 bp | GCAATTCCACCAACTAGAGACCAGACAATGATACATAGGCACCAAGACCCAAAGATGGTTTCCACAGTATaGATAGGTAACCAGCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: AIPPTRDQTMIHRHQDPKMVSTV*IGNQRS Trigger: GGAACGCTGGTTACCTATCCATACTGTGGAAACCAT...CTTTGGGTCTTGGTGCCTATGTATCATTGTCTGGTCTCTAGTTGGTGGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR CAA 72 bp | TGGCATGTTTTATTGCAGCCCAGTTCCAGCCAGAGCTaGCCAACTTATTACAACAGAAGTCCAGCAATAGGT | + |
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Preference number: 4 (lower is better) Translates to: WHVLLQPSSSQS*PTYYNRSPAIG Trigger: ACCTATTGCTGGACTTCTGTTGTAATAAGTTGGCAAGCTCTGGCTGGAACTGGGCTGCAATAAAACATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| CDS-3UTR TCA 90 bp | GCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTACCACTGGATTTTTGTTaGGTTCTGCCAGCTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ALKQHQVTSTVLCSLALVPLDFC*VLPAVF Trigger: GAAGACAGCTGGCAGAACTCAACAAAAATCCAGTGG...TACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021148.13 |
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| CDS-3UTR TCA 90 bp | TTATGCTCTCTAGCTCTTGTATACCAAACACAACTTCCCATCTCAGCTAAAACCTTTGGGAAAGTGAGATaGGCCTTAAAAACACCACCT | + |
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Preference number: 4 (lower is better) Translates to: LCSLALVYQTQLPISAKTFGKVR*ALKTPP Trigger: AGGTGGTGTTTTTAAGGCTCATCTCACTTTCCCAAA...GGTTTTAGCTGAGATGGGAAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021148.13 |
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| CDS-3UTR CCA 90 bp | GCACTCAAACAGCATCAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTAGAGGGGATAATCTTTTaGGAAAGTGAGATGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ALKQHQVTSTVLCSLALVEGIIF*ESEMSL Trigger: AAGGCTCATCTCACTTTCCCAAAAGATTATCCCCTC...TACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTGATGCTGTTTGAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021148.13 |
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| CDS-3UTR TCA 90 bp | AATTCAAAATGCGTAATCATCTTTAGTTGGCACTTGTTAGGCTCTTGTCAGCATATCTACATTTGCAGGTaGGTCTCCATTAGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: NSKCVIIFSWHLLGSCQHIYICR*VSIRIC Trigger: GCAGATCCTAATGGAGACTCACCTGCAAATGTAGAT...ATGCTGACAAGAGCCTAACAAGTGCCAACTAAAGATGATTACGCATTTTGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGACAAGTACTGTTTTATGCTCTCTAGCTCTTGTATACCAAACACAACTTATGGTTTCCACAGTATaGATAGGTAACCAGCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QVTSTVLCSLALVYQTQLMVSTV*IGNQRS Trigger: GGAACGCTGGTTACCTATCCATACTGTGGAAACCAT...AAGTTGTGTTTGGTATACAAGAGCTAGAGAGCATAAAACAGTACTTGTCACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| 3UTR CAA 72 bp | CTACTACAAGAAAGCATTATTTGGTACAAGGTGTGTTaGTGGATGTACATGAACAGTATATATATTATCCGG | + |
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Preference number: 4 (lower is better) Translates to: LLQESIIWYKVC*WMYMNSIYIIR Trigger: CCGGATAATATATATACTGTTCATGTACATCCACAAACACACCTTGTACCAAATAATGCTTTCTTGTAGTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021148.13 ENSMUST00000138247.8 |
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| CDS-3UTR CAA 90 bp | CCCAAAGAAACACAAGGTTATCCAAAGGTAAATAAGTATATTACAGTGCCACTTTCCACTGGATTTTTGTaGAGTTCTGCCAGCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: PKETQGYPKVNKYITVPLSTGFL*SSASCL Trigger: AAGACAGCTGGCAGAACTCAACAAAAATCCAGTGGA...AAGTGGCACTGTAATATACTTATTTACCTTTGGATAACCTTGTGTTTCTTTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021148.13 |
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