Pregenerated sensors for UBE2F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034343Ensembl transcript IDs: ENSMUST00000059743.12, ENSMUST00000171112.8, ENSMUST00000171165.8, ENSMUST00000178627.8, ENSMUST00000191368.7
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGAGCACATGCCATACATGTGGAAGCCAGAGGAGACAGCTCTGTaGAGCTGGCTCTCATTCCACCCTTACAGGGGCTGGGAGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: CEHMPYMWKPEETAL*SWLSFHPYRGWEEG Trigger: GCCCTCCTCCCAGCCCCTGTAAGGGTGGAATGAGAGCCAGCTCCACAGAGCTGTCTCCTCTGGCTTCCACATGTATGGCATGTGCTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR GCA 90 bp | AGGCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTaGATGGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: RQSKSSHWWAGLFGH*MAGQGTQLLGSSLG Trigger: GCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | CACATGCCATACATGTGGAAGCCAGAGGAGACAGCTCTGTGGAGCTaGCTCTCATTCCACCCTTACAGGGGCTGGGAGGAGGGCAAACTC | + |
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Preference number: 1 (lower is better) Translates to: HMPYMWKPEETALWS*LSFHPYRGWEEGKL Trigger: GAGTTTGCCCTCCTCCCAGCCCCTGTAAGGGTGGAATGAGAGCCAGCTCCACAGAGCTGTCTCCTCTGGCTTCCACATGTATGGCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | AAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATaGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTGGGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: KAKALIGGQVSLVTA*LARAPSFWVVPWAS Trigger: GCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR GCA 90 bp | AGCCCTGGCTCATGCTATGACCATGGCATAATCACCTACCAGCCTTaGTTAGAGAGCCCTAGCCTGCTGTGTCTGGGTAGCAATCGAGGG | + |
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Preference number: 1 (lower is better) Translates to: SPGSCYDHGIITYQP*LESPSLLCLGSNRG Trigger: CCCTCGATTGCTACCCAGACACAGCAGGCTAGGGCTCTCTAAGCAAGGCTGGTAGGTGATTATGCCATGGTCATAGCATGAGCCAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 90 bp | CCACAACTGAAGACCCTGCTTCCTGGGATCTGCTTGCAAGCTCCCTaGACAGTGGGTGTTGTGACACCTGCCATCCTAGCACTGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PQLKTLLPGICLQAP*TVGVVTPAILALRK Trigger: TTTCCTCAGTGCTAGGATGGCAGGTGTCACAACACCCACTGTTCAGGGAGCTTGCAAGCAGATCCCAGGAAGCAGGGTCTTCAGTTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | AGTGACAGACAGCCTAGACCTGCCGGCACCCAGTGCTTTACAGTGTaGCATCAGCTACCGCATGTCAGCTGTAGGCCTCAGAAACAAAGT | + |
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Preference number: 1 (lower is better) Translates to: SDRQPRPAGTQCFTV*HQLPHVSCRPQKQS Trigger: ACTTTGTTTCTGAGGCCTACAGCTGACATGCGGTAGCTGATGCCACACTGTAAAGCACTGGGTGCCGGCAGGTCTAGGCTGTCTGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | GTTCTTTTCCTGGGCTCTTTACTCAGGCAAAGCAAAAGCTCTCATTaGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGCCAGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: VLFLGSLLRQSKSSH*WAGLFGHCMAGQGT Trigger: GGTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCCTGAGTAAAGAGCCCAGGAAAAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | CAAACCTGTCCTCTGGGTTTTACCCACCGAGTCATCCCTGCCGTGTaGCTTTTGTCATGGCATGGCTTCCTGTTGCCTTTCACTTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: QTCPLGFTHRVIPAV*LLSWHGFLLPFTLA Trigger: GGCCAAAGTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGGGATGACTCGGTGGGTAAAACCCAGAGGACAGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 90 bp | CCTTCTGAGAGGCCCACCCTGCAAGTGTTTCCTTCTCTGAGCACTTaGGAATACACCACTTTCACTCAAGCTGAGCAGCAGCCTCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: PSERPTLQVFPSLST*EYTTFTQAEQQPPR Trigger: CCTTGGAGGCTGCTGCTCAGCTTGAGTGAAAGTGGTGTATTCTCAAGTGCTCAGAGAAGGAAACACTTGCAGGGTGGGCCTCTCAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR GCA 90 bp | TGGGAATCAAACCTGTCCTCTGGGTTTTACCCACCGAGTCATCCCTaGCGTGTGGCTTTTGTCATGGCATGGCTTCCTGTTGCCTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: WESNLSSGFYPPSHP*RVAFVMAWLPVAFH Trigger: GTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGGGATGACTCGGTGGGTAAAACCCAGAGGACAGGTTTGATTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 90 bp | AGCTGTAGGCCTCAGAAACAAAGTCACCACAGCTCCTTTCTTTTCTaGGTGGATACCTGCCGCAAGTGCTTCTGTCTGAGGCTGCGCATG | + |
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Preference number: 1 (lower is better) Translates to: SCRPQKQSHHSSFLF*VDTCRKCFCLRLRM Trigger: CATGCGCAGCCTCAGACAGAAGCACTTGCGGCAGGTATCCACTCAGAAAAGAAAGGAGCTGTGGTGACTTTGTTTCTGAGGCCTACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | AAGCATTCTTGTGAGGAAGTCCTATCTGTGATGCTAGCACTGCCTTaGTTAGCTGCTGGGCACCAGCCCAATGACAGCAACACTGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KHSCEEVLSVMLALP*LAAGHQPNDSNTGR Trigger: TCTGCCAGTGTTGCTGTCATTGGGCTGGTGCCCAGCAGCTAACCAAGGCAGTGCTAGCATCACAGATAGGACTTCCTCACAAGAATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | TTCACTTTCAGCAGAGTGGAGCTAGGGCAGCACAGTGGTGTTCCCTaGGAAGAAGCTCCACAAAGCTTCTCTACAGTATCTGCTCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: FTFSRVELGQHSGVP*EEAPQSFSTVSALA Trigger: TGCAAGAGCAGATACTGTAGAGAAGCTTTGTGGAGCTTCTTCCCAGGGAACACCACTGTGCTGCCCTAGCTCCACTCTGCTGAAAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | TCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGGCAGCACAGTaGTGTTCCCTGGGAAGAAGCTCCACAAAGCTTCTCTACAGTATC | + |
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Preference number: 1 (lower is better) Translates to: SESFHFQQSGARAAQ*CSLGRSSTKLLYSI Trigger: GATACTGTAGAGAAGCTTTGTGGAGCTTCTTCCCAGGGAACACCACTGTGCTGCCCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 90 bp | ATTCCACCCTTACAGGGGCTGGGAGGAGGGCAAACTCAGGTCACCTaGTGTACAAGCACTTTTGCCACTGAACTGTCTTGCCCATTATTT | + |
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Preference number: 1 (lower is better) Translates to: IPPLQGLGGGQTQVT*CTSTFATELSCPLF Trigger: AAATAATGGGCAAGACAGTTCAGTGGCAAAAGTGCTTGTACATCAGGTGACCTGAGTTTGCCCTCCTCCCAGCCCCTGTAAGGGTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 90 bp | GAACTGGGTATGGACAGAGCGCCAGGAGGAAAGCAGAGACTGGAGTaGACAGAGTACATGCTCTTTATCTCAGGGTGTAAAGGCACTACT | + |
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Preference number: 1 (lower is better) Translates to: ELGMDRAPGGKQRLE*TEYMLFISGCKGTT Trigger: AGTAGTGCCTTTACACCCTGAGATAAAGAGCATGTACTCTGTTCACTCCAGTCTCTGCTTTCCTCCTGGCGCTCTGTCCATACCCAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR GCA 90 bp | ATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTaGAGGACACCGATTGTTGGGGGAAAGGAAGCAAGCGCTATATCC | + |
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Preference number: 1 (lower is better) Translates to: IANLPVTWNMSLHHL*RTPIVGGKEASAIS Trigger: GGATATAGCGCTTGCTTCCTTTCCCCCAACAATCGGTGTCCTGCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| 3UTR TCA 90 bp | ACACTGACAGGCACTAGTGTCATTTCTTCCACTGAAGCATTCTTGTaGGGAAGTCCTATCTGTGATGCTAGCACTGCCTTGGTTAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TLTGTSVISSTEAFL*GSPICDASTALVSC Trigger: GCAGCTAACCAAGGCAGTGCTAGCATCACAGATAGGACTTCCTCACAAGAATGCTTCAGTGGAAGAAATGACACTAGTGCCTGTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 90 bp | CATCTAGAGCTCCTAGCTAGACCTCCATCATTTCAGACATTAGTGTaGGGCCAAACTTCTGAAGTAGAAGAAAGCTGTTCACCACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: HLELLARPPSFQTLV*GQTSEVEESCSPQL Trigger: GAGCTGTGGTGAACAGCTTTCTTCTACTTCAGAAGTTTGGCCTCACACTAATGTCTGAAATGATGGAGGTCTAGCTAGGAGCTCTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | GTTTTAAAAGTTATTTCTTTAATGTGTGAGCACATGCCATACATGTaGAAGCCAGAGGAGACAGCTCTGTGGAGCTGGCTCTCATTCCAC | + |
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Preference number: 1 (lower is better) Translates to: VLKVISLMCEHMPYM*KPEETALWSWLSFH Trigger: GTGGAATGAGAGCCAGCTCCACAGAGCTGTCTCCTCTGGCTTCCACATGTATGGCATGTGCTCACACATTAAAGAAATAACTTTTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 90 bp | GAAAGTTCTTCTTTGGCAAAAGCATGCCCAGCAACGTTACCATATTaGCATTTTACTCAGGATAACTTATTTCATGAACAGTGGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: ESSSLAKACPATLPY*HFTQDNLFHEQWDC Trigger: ACAGTCCCACTGTTCATGAAATAAGTTATCCTGAGTAAAATGCCAATATGGTAACGTTGCTGGGCATGCTTTTGCCAAAGAAGAACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGCATGGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTGGGCAAGCACGGAGTGGCTAGAAAGTaGAGCAGGGATGCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HCMAGQGTQLLGSSLGKHGVARK*SRDAEV Trigger: CACCTCTGCATCCCTGCTGCACTTTCTAGCCACTCC...GTGCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGCATGGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTGGGCAAGCACCAAACAAAACAACCCTaGTGGCCACAGGAACTCGTG | + |
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Preference number: 2 (lower is better) Translates to: HCMAGQGTQLLGSSLGKHQTKQP*WPQELV Trigger: CACGAGTTCCTGTGGCCACCAGGGTTGTTTTGTTTG...GTGCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGCACCTTTCTCACAGTaGAGGCAGGCTGCTCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: GKAKALIGGQVSLVTAWLAPFSQ*RQAALR Trigger: CCGGAGAGCAGCCTGCCTGCACTGTGAGAAAGGTGC...CAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCATGGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTGGGCAAGCACAAACAACAACAAAAATaGGCGAGAGCAGGGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: HCMAGQGTQLLGSSLGKHKQQQK*ARAGLG Trigger: TCCTAGCCCTGCTCTCGCTCATTTTTGTTGTTGTTT...GTGCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 90 bp | TTCCCTGGGAAGAAGCTCCACAAAGCTTCTCTACAGTATCTGCTCTaGCAAGTGCACACCTTGCAGGCTGTGCTCAGCGCGAAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: FPGKKLHKASLQYLL*QVHTLQAVLSAKDR Trigger: CCTGTCCTTCGCGCTGAGCACAGCCTGCAAGGTGTGCACTTGCAAGAGCAGATACTGTAGAGAAGCTTTGTGGAGCTTCTTCCCAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGTGCCTAGGGGTATGTaGACTGGGTATGGACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GKAKALIGGQVSLVTAWLVPRGM*TGYGQS Trigger: GCTCTGTCCATACCCAGTTCACATACCCCTAGGCAC...CAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTCAGTGTGGAGAAAGTGACAGACAGCCTAGACCTGCCGGCACCCAGTGCTTTGCTTTGGCCAGGGTaGGGAAATCAAGAAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: KLSVEKVTDSLDLPAPSALLWPG*GNQEAG Trigger: GCCAGCTTCTTGATTTCCCCACCCTGGCCAAAGCAA...AGCACTGGGTGCCGGCAGGTCTAGGCTGTCTGTCACTTTCTCCACACTGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTCAGTGTGGAGAAAGTGACAGACAGCCTAGACCTGCCGGCACCCAGTGCTATTGAGAGCACTGGCTaGCTCTTCCAGAGGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KLSVEKVTDSLDLPAPSAIESTG*LFQRSQ Trigger: TTGGGACCTCTGGAAGAGCCAGCCAGTGCTCTCAAT...AGCACTGGGTGCCGGCAGGTCTAGGCTGTCTGTCACTTTCTCCACACTGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 90 bp | TGTTCTTTTCCTGGGCTCTTTACTCAGGCAAAGCAAAAGCTCTCATaGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGCCAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: CSFPGLFTQAKQKLS*VGRSLWSLHGWPGH Trigger: GTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCCTGAGTAAAGAGCCCAGGAAAAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGGCAAGCACCTCTGGTACACTCTCCACATTCTCTACCTCGTTCCATATCATGCAACTCTCCTTCTaGGAGGCCCACCCTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PWASTSGTLSTFSTSFHIMQLSF*EAHPAS Trigger: ACTTGCAGGGTGGGCCTCTCAGAAGGAGAGTTGCAT...GATATGGAACGAGGTAGAGAATGTGGAGAGTGTACCAGAGGTGCTTGCCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACAACTGAAGACCCTGCTTCCTGGGATCTGCTTGCAAGCTCCCTGAACAGTAGACGCTGTCCTTCCTaGTCTGTTCCTCTAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: PTTEDPASWDLLASSLNSRRCPS*SVPLGM Trigger: CATACCTAGAGGAACAGAGCAGGAAGGACAGCGTCT...ACTGTTCAGGGAGCTTGCAAGCAGATCCCAGGAAGCAGGGTCTTCAGTTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACAACTGAAGACCCTGCTTCCTGGGATCTGCTTGCAAGCTCCCTGAACAGTTTCTTCAGGACAGCATaGTCGCAGGACTGGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: PTTEDPASWDLLASSLNSFFRTA*SQDWDN Trigger: ATTGTCCCAGTCCTGCGACCATGCTGTCCTGAAGAA...ACTGTTCAGGGAGCTTGCAAGCAGATCCCAGGAAGCAGGGTCTTCAGTTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGTTTCCCATAGAGGGCTaGCCCCACCTCTTCACAAGT | + |
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Preference number: 2 (lower is better) Translates to: GKAKALIGGQVSLVTAWLFPIEG*PHLFTS Trigger: ACTTGTGAAGAGGTGGGGCCAGCCCTCTATGGGAAA...CAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 90 bp | TGTCCTCTGGGTTTTACCCACCGAGTCATCCCTGCCGTGTGGCTTTaGTCATGGCATGGCTTCCTGTTGCCTTTCACTTTGGCCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: CPLGFTHRVIPAVWL*SWHGFLLPFTLACF Trigger: AAAACAGGCCAAAGTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGGGATGACTCGGTGGGTAAAACCCAGAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGCCAACTAAACCCAGAAGATaGCAGGCAGGAAGACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: KQKLSLVGRSLWSLHGWPTKPRR*QAGRLA Trigger: TGCCAGTCTTCCTGCCTGTCATCTTCTGGGTTTAGT...TGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGGCAGCACAGTCGGCACTGTGTACACTaGCAGGCACTAGTGTCATTT | + |
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Preference number: 2 (lower is better) Translates to: WVALRAFTFSRVELGQHSRHCVH*QALVSF Trigger: AAATGACACTAGTGCCTGTCAGTGTACACAGTGCCG...ACTGTGCTGCCCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGCAGTGCTTTACAGTGTaGCATCAGCTACCGCATGTC | + |
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Preference number: 2 (lower is better) Translates to: GKAKALIGGQVSLVTAWLQCFTV*HQLPHV Trigger: GACATGCGGTAGCTGATGCCACACTGTAAAGCACTG...CAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGGCAAGCACCTCTGGTACACTCTCCACATTCTCTACCTCGTTCCATATCCATCAGAGACAACTGTaGCAAAGTCCTCAGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PWASTSGTLSTFSTSFHIHQRQL*QSPQTC Trigger: GCAGGTCTGAGGACTTTGTCACAGTTGTCTCTGATG...GATATGGAACGAGGTAGAGAATGTGGAGAGTGTACCAGAGGTGCTTGCCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAAACGAGGCAGAAGGCCAGCTTGGACCAAGCAGCAACAAGCAAAACAAAACCCCTGGCTCATGCTATaGCCATGGCATAATCACCTA | + |
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Preference number: 2 (lower is better) Translates to: RKRGRRPAWTKQQQAKQNPWLML*PWHNHL Trigger: TAGGTGATTATGCCATGGTCATAGCATGAGCCAGGG...GTTTTGTTTTGCTTGTTGCTGCTTGGTCCAAGCTGGCCTTCTGCCTCGTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGGCAGCACAGTACTGAAGCATTCTTGTaGGGAAGTCCTATCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: WVALRAFTFSRVELGQHSTEAFL*GSPICD Trigger: ATCACAGATAGGACTTCCTCACAAGAATGCTTCAGT...ACTGTGCTGCCCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGGCAAGCACCTCTGGTACACTCTCCACATTCTCTACCTCGTTCCATATCACCTCTTCACAAGTTTaGGGATCATACTTCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PWASTSGTLSTFSTSFHITSSQV*GSYFLG Trigger: GCCAAGGAAGTATGATCCTCAAACTTGTGAAGAGGT...GATATGGAACGAGGTAGAGAATGTGGAGAGTGTACCAGAGGTGCTTGCCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGGCAGCACAGTAAGTGTTTCCTTCTCTaGGCACTTGAGAATACACCA | + |
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Preference number: 2 (lower is better) Translates to: WVALRAFTFSRVELGQHSKCFLL*ALENTP Trigger: TGGTGTATTCTCAAGTGCTCAGAGAAGGAAACACTT...ACTGTGCTGCCCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGAGGAAAGTTCTTCTTTaGCAAAAGCATGCCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GKAKALIGGQVSLVTAWLRKVLL*QKHAQQ Trigger: TTGCTGGGCATGCTTTTGCCAAAGAAGAACTTTCCT...CAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 90 bp | CTTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTaGTGCAGGACACCGATTGTTGGGGGAAAGGAAGCAAGCGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: LIANLPVTWNMSLHH*CRTPIVGGKEASAI Trigger: TATAGCGCTTGCTTCCTTTCCCCCAACAATCGGTGTCCTGCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
||
| 3UTR CAA 90 bp | ACTACCCTGATTATGGCGTATGCTGCAGCTATGAAACTCCCCCTCTaGGAACCACTGGCAAATTGGAAGACAGTCATAATGGAGTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TTLIMAYAAAMKLPL*EPLANWKTVIMELW Trigger: CCACAACTCCATTATGACTGTCTTCCAATTTGCCAGTGGTTCCAAGAGGGGGAGTTTCATAGCTGCAGCATACGCCATAATCAGGGTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAACGAGGCAGAAGGCCAGCTTGGACCAAGCAGCAACAAGCAAAACAAAACCCTTCTCTGAGCACTTaGGAATACACCACTTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: RKRGRRPAWTKQQQAKQNPSLST*EYTTFT Trigger: AGTGAAAGTGGTGTATTCTCAAGTGCTCAGAGAAGG...GTTTTGTTTTGCTTGTTGCTGCTTGGTCCAAGCTGGCCTTCTGCCTCGTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGCCAAGTGAACAGAGTACATaGTCTTTATCTCAGGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: KQKLSLVGRSLWSLHGWPSEQST*SLSQGV Trigger: TACACCCTGAGATAAAGAGCATGTACTCTGTTCACT...TGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTGCAGGTTCTTCAGGACAGCATaGTCGCAGGACTGGGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: LIANLPVTWNMSLHHLCRFFRTA*SQDWDN Trigger: ATTGTCCCAGTCCTGCGACCATGCTGTCCTGAAGAA...CCTGCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGGCAGCACAGTAATGACTATGCATTCTaGGAAGCTTCACATCTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: WVALRAFTFSRVELGQHSNDYAF*EASHLG Trigger: ACCTAGATGTGAAGCTTCCCAGAATGCATAGTCATT...ACTGTGCTGCCCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGCCAAAATCAAAACAACTGTaGCTTTGGGTTGCTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KQKLSLVGRSLWSLHGWPKSKQL*LWVALR Trigger: TCTCAGAGCAACCCAAAGCCACAGTTGTTTTGATTT...TGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCGTGGAAGAAGCTAAGAGAGTGTGCATCCAATCACAGTTTATAGCGGGTCATCAGAGACAACTGTaGCAAAGTCCTCAGACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TFVEEAKRVCIQSQFIAGHQRQL*QSPQTC Trigger: GCAGGTCTGAGGACTTTGTCACAGTTGTCTCTGATG...ACCCGCTATAAACTGTGATTGGATGCACACTCTCTTAGCTTCTTCCACGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGGCACTGTGTACACTGACAGGCACTAGTGTCATTTCTTCCACTGAAGCATTCAAGATCTACAGTGAATaGCTATGCATTCTGGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PALCTLTGTSVISSTEAFKIYSE*LCILGS Trigger: GCTTCCCAGAATGCATAGTCATTCACTGTAGATCTT...GAATGCTTCAGTGGAAGAAATGACACTAGTGCCTGTCAGTGTACACAGTGCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGGCAGCACAGTGAAGCTAAGAGAGTGTaGATCCAATCACAGTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: WVALRAFTFSRVELGQHSEAKRV*IQSQFI Trigger: TATAAACTGTGATTGGATGCACACTCTCTTAGCTTC...ACTGTGCTGCCCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTGCAGGATTCTTCAGGACAGCATaGTCGCAGGACTGGGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLPICQSHGTCHYTTCAGFFRTA*SQDWDN Trigger: ATTGTCCCAGTCCTGCGACCATGCTGTCCTGAAGAA...TCCTGCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTGCTTCTTCAGGACAGCATaGTCGCAGGACTGGGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: FLIANLPVTWNMSLHHLCFFRTA*SQDWDN Trigger: ATTGTCCCAGTCCTGCGACCATGCTGTCCTGAAGAA...GCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCACTGGTTCAGATGTCTAAAGCCAGAATAAGCCCACCTGTCTCTCCAGGGGAACCACTGGCAAATTaGAAGACAGTCATAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ISLVQMSKARISPPVSPGEPLAN*KTVIME Trigger: CTCCATTATGACTGTCTTCCAATTTGCCAGTGGTTC...CCCTGGAGAGACAGGTGGGCTTATTCTGGCTTTAGACATCTGAACCAGTGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAACTTCAGAGGGATTCCACCAGACAGCCTAGACAGTAGTTTCAGTAAACATCCAGACACACTTTCTTaGTGTATTATGTTGTTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: YNFRGIPPDSLDSSFSKHPDTLS*CIMLFA Trigger: GGCGAACAACATAATACAGCAAGAAAGTGTGTCTGG...ATGTTTACTGAAACTACTGTCTAGGCTGTCTGGTGGAATCCCTCTGAAGTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
||
| 3UTR-3UTR GCA 90 bp | GACAGCCTAGACAGTAGTTTCAGTAAACATGTTAAGGGAAGCAGACAACTCTCTCCAGACACACTTTCTTaGTGTATTATGTTGTTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: DSLDSSFSKHVKGSRQLSPDTLS*CIMLFA Trigger: GGCGAACAACATAATACAGCAAGAAAGTGTGTCTGG...AGAGAGTTGTCTGCTTCCCTTAACATGTTTACTGAAACTACTGTCTAGGCTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
||
| 3UTR CCA 72 bp | CAGCCTAGACCTGCCGGCACCCAGTGCTTTACAGTGTaGCATCAGCTACCGCATGTCAGCTGTAGGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPRPAGTQCFTV*HQLPHVSCRPQ Trigger: CTGAGGCCTACAGCTGACATGCGGTAGCTGATGCCACACTGTAAAGCACTGGGTGCCGGCAGGTCTAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | TTGGTCACTGCATGGCTGGCCAGGGCACCCAGCTTCTaGGTAGTTCCTTGGGCAAGCACCTCTGGTACACTC | + |
|
Preference number: 3 (lower is better) Translates to: LVTAWLARAPSF*VVPWASTSGTL Trigger: GAGTGTACCAGAGGTGCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTGACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | GCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTGCATaGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALIGGQVSLVTA*LARAPSFWVVP Trigger: AGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCATGGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTGGGCAAGCACGAACTAGTTAGAACGTaGCTTTGGCCAGGGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HCMAGQGTQLLGSSLGKHELVRT*LWPGWG Trigger: TCCCCACCCTGGCCAAAGCAACGTTCTAACTAGTTC...GTGCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | TACATGTGGAAGCCAGAGGAGACAGCTCTGTGGAGCTaGCTCTCATTCCACCCTTACAGGGGCTGGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YMWKPEETALWS*LSFHPYRGWEE Trigger: CTCCTCCCAGCCCCTGTAAGGGTGGAATGAGAGCCAGCTCCACAGAGCTGTCTCCTCTGGCTTCCACATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | ATCTCACATGGCCAAGGTAAGGCTCCAGGTGCTCACTaGTGTCACACCAGGTGCTCCCAGAGGGACAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ISHGQGKAPGAH*CHTRCSQRDRN Trigger: GTTCCTGTCCCTCTGGGAGCACCTGGTGTGACACCAGTGAGCACCTGGAGCCTTACCTTGGCCATGTGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | TGGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTaGGCAAGCACCTCTGGTACACTCTCCACATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WLARAPSFWVVP*ASTSGTLSTFS Trigger: AGAGAATGTGGAGAGTGTACCAGAGGTGCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR GCA 72 bp | AAAAGCTCTCATTGGTGGGCAGGTCTCTTTGGTCACTaGATGGCTGGCCAGGGCACCCAGCTTCTGGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSSHWWAGLFGH*MAGQGTQLLGS Trigger: ACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | ATGCCATACATGTGGAAGCCAGAGGAGACAGCTCTGTaGAGCTGGCTCTCATTCCACCCTTACAGGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MPYMWKPEETAL*SWLSFHPYRGW Trigger: CCAGCCCCTGTAAGGGTGGAATGAGAGCCAGCTCCACAGAGCTGTCTCCTCTGGCTTCCACATGTATGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | GCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTTaGTCACTGCATGGCTGGCCAGGGCACCCAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AKQKLSLVGRSL*SLHGWPGHPAS Trigger: AGAAGCTGGGTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCATGGCTGGCCAGGGCACCCAGCTTCTGGGTAGTTCCTTGGGCAAGCACAAAACAACTGTGGCTTaGGGTTGCTCTGAGAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HCMAGQGTQLLGSSLGKHKTTVA*GCSESF Trigger: AAAGCTCTCAGAGCAACCCAAAGCCACAGTTGTTTT...GTGCTTGCCCAAGGAACTACCCAGAAGCTGGGTGCCCTGGCCAGCCATGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | AGCACTGCCTTGGTTAGCTGCTGGGCACCAGCCCAATaGCAGCAACACTGGCAGAGGGTTAAGTCACAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: STALVSCWAPAQ*QQHWQRVKSQL Trigger: AAGCTGTGACTTAACCCTCTGCCAGTGTTGCTGTCATTGGGCTGGTGCCCAGCAGCTAACCAAGGCAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | ACCCACCGAGTCATCCCTGCCGTGTGGCTTTTGTCATaGCATGGCTTCCTGTTGCCTTTCACTTTGGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: THRVIPAVWLLS*HGFLLPFTLAC Trigger: ACAGGCCAAAGTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGGGATGACTCGGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | CCTCTGGGTTTTACCCACCGAGTCATCCCTGCCGTGTaGCTTTTGTCATGGCATGGCTTCCTGTTGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLGFTHRVIPAV*LLSWHGFLLPF Trigger: GAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGGGATGACTCGGTGGGTAAAACCCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGCTTTGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGGCAGGACACCGATTGTaGGGGGAAAGGAAGCAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: TVALGCSESFHFQQSGARAGHRL*GERKQA Trigger: CGCTTGCTTCCTTTCCCCCAACAATCGGTGTCCTGC...CCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCAAAGCCACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | CAGTGCAGGCAGGCTGCTCTCCGGCACTGTGTACACTaGCAGGCACTAGTGTCATTTCTTCCACTGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QCRQAALRHCVH*QALVSFLPLKH Trigger: ATGCTTCAGTGGAAGAAATGACACTAGTGCCTGTCAGTGTACACAGTGCCGGAGAGCAGCCTGCCTGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | AGAGGTCAGGTAAGCACCACTGCTCACTGTGAAGGGTaGGGTTATGGAGTCTGTGGACTGGGGAGAGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RGQVSTTAHCEG*GYGVCGLGRVV Trigger: AACCACTCTCCCCAGTCCACAGACTCCATAACCTCACCCTTCACAGTGAGCAGTGGTGCTTACCTGACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | AGGTGCTCCCAGAGGGACAGGAACACACATAGGCCATaGGACATCCCATTGTCTCCTGATGGCTGGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RCSQRDRNTHRP*DIPLSPDGWER Trigger: TCTTTCCCAGCCATCAGGAGACAATGGGATGTCTCATGGCCTATGTGTGTTCCTGTCCCTCTGGGAGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | GGCTCTTTACTCAGGCAAAGCAAAAGCTCTCATTGGTaGGCAGGTCTCTTTGGTCACTGCATGGCTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSLLRQSKSSHW*AGLFGHCMAGQ Trigger: CTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCCTGAGTAAAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | CTGGGCTCTTTACTCAGGCAAAGCAAAAGCTCTCATTaGTGGGCAGGTCTCTTTGGTCACTGCATGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGSLLRQSKSSH*WAGLFGHCMAG Trigger: GCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCCTGAGTAAAGAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | GTCATAATGGAGTTGTGGCAGAGTCTTAGACTGGGCTaGCTCCCCAGGCAGGATGGCAATGACAGAGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VIMELWQSLRLG*LPRQDGNDRVC Trigger: ACAGACTCTGTCATTGCCATCCTGCCTGGGGAGTCAGCCCAGTCTAAGACTCTGCCACAACTCCATTATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | ACACCTTGCAGGCTGTGCTCAGCGCGAAGGACAGGGTaGCTATGGGGTTCTCAGTGCTTGAACAGAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TPCRLCSARRTG*LWGSQCLNRMK Trigger: TTTCATTCTGTTCAAGCACTGAGAACCCCATAGTCACCCTGTCCTTCGCGCTGAGCACAGCCTGCAAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | ACCTCAATGACTGTTTCCTGTGGGGCTGGCACACTGTaGGGGCAATGGAAACACTGGACCTTGGACTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: TSMTVSCGAGTL*GQWKHWTLDYV Trigger: GACATAGTCCAAGGTCCAGTGTTTCCATTGCCCTCACAGTGTGCCAGCCCCACAGGAAACAGTCATTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | CCGAGTCATCCCTGCCGTGTGGCTTTTGTCATGGCATaGCTTCCTGTTGCCTTTCACTTTGGCCTGTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSHPCRVAFVMA*LPVAFHFGLFF Trigger: GAAAAACAGGCCAAAGTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGGGATGACTCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGCTTTGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGAAGCAGACAACTCTCTaGAGGCCCAGACACACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TVALGCSESFHFQQSGARKQTTL*RPRHTF Trigger: GAAAGTGTGTCTGGGCCTCAAGAGAGTTGTCTGCTT...CCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCAAAGCCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | AGGCCCACCCTGCAAGTGTTTCCTTCTCTGAGCACTTaGGAATACACCACTTTCACTCAAGCTGAGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPTLQVFPSLST*EYTTFTQAEQQ Trigger: CTGCTGCTCAGCTTGAGTGAAAGTGGTGTATTCTCAAGTGCTCAGAGAAGGAAACACTTGCAGGGTGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | TGCTTGAACAGAATGAAAAGGGAGGTCACCCACAACTaGAGACCCTGCTTCCTGGGATCTGCTTGCAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CLNRMKREVTHN*RPCFLGSACKL Trigger: GAGCTTGCAAGCAGATCCCAGGAAGCAGGGTCTTCAGTTGTGGGTGACCTCCCTTTTCATTCTGTTCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | GGCCTCCTGCATCAGCCCTCTGTGCTGCTGAGTGCTTaGTATAGGTCATGGAAGGAAAGTTCTTCTTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLLHQPSVLLSA*YRSWKESSSLA Trigger: TGCCAAAGAAGAACTTTCCTTCCATGACCTATATCAAGCACTCAGCAGCACAGAGGGCTGATGCAGGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR TCA 72 bp | ATCTATGTAAAAGCAGCCAGAGTGCCTAGGGGTATGTaGACTGGGTATGGACAGAGCGCCAGGAGGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IYVKAARVPRGM*TGYGQSARRKA Trigger: TGCTTTCCTCCTGGCGCTCTGTCCATACCCAGTTCACATACCCCTAGGCACTCTGGCTGCTTTTACATAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR GCA 72 bp | CTGGGAAGAAGCTCCACAAAGCTTCTCTACAGTATCTaGTCTTGCAAGTGCACACCTTGCAGGCTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGRSSTKLLYSI*SCKCTPCRLCS Trigger: TGAGCACAGCCTGCAAGGTGTGCACTTGCAAGAGCAGATACTGTAGAGAAGCTTTGTGGAGCTTCTTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR GCA 72 bp | AAGCTGAAAACCACCCTGGGCCAGGCAATAAGAAAGTaGCTACTCGAGATTGTGGCTGCTGGCTTAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KLKTTLGQAIRK*LLEIVAAGLAF Trigger: AAAGGCTAAGCCAGCAGCCACAATCTCGAGTAGGCACTTTCTTATTGCCTGGCCCAGGGTGGTTTTCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | TGGCTGGGGTCACAAGAACTAGTTAGAACGTTGCTTTaGCCAGGGTGGGGAAATCAAGAAGCTGGCAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: WLGSQELVRTLL*PGWGNQEAGSL Trigger: TAGACTGCCAGCTTCTTGATTTCCCCACCCTGGCCAAAGCAACGTTCTAACTAGTTCTTGTGACCCCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR CCA 72 bp | CCCCACCTCTTCACAAGTTTGAGGATCATACTTCCTTaGCAGACTAGAAACTACCAGCTTGGCTGGGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PHLFTSLRIILP*QTRNYQLGWGH Trigger: GTGACCCCAGCCAAGCTGGTAGTTTCTAGTCTGCCAAGGAAGTATGATCCTCAAACTTGTGAAGAGGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGCTTTGGGTTGCTCTGAGAGCTTTCACTTTCAGCAGAGTGGAGCTAGGTGGGGTTCTCAGTGCTaGAACAGAATGAAAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TVALGCSESFHFQQSGARWGSQC*NRMKRE Trigger: CTCCCTTTTCATTCTGTTCAAGCACTGAGAACCCCA...CCTAGCTCCACTCTGCTGAAAGTGAAAGCTCTCAGAGCAACCCAAAGCCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 72 bp | GACAGTATGGCCTCCTGCATCAGCCCTCTGTGCTGCTaGGTGCTTGATATAGGTCATGGAAGGAAAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: DSMASCISPLCC*VLDIGHGRKVL Trigger: AAGAACTTTCCTTCCATGACCTATATCAAGCACTCAGCAGCACAGAGGGCTGATGCAGGAGGCCATACTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 72 bp | CCTCAGAAACAAAGTCACCACAGCTCCTTTCTTTTCTaGGTGGATACCTGCCGCAAGTGCTTCTGTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: PQKQSHHSSFLF*VDTCRKCFCLR Trigger: CCTCAGACAGAAGCACTTGCGGCAGGTATCCACTCAGAAAAGAAAGGAGCTGTGGTGACTTTGTTTCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CAA 90 bp | ATTTCACTGGTTCAGATGTCTAAAGCCAGAATAAGCCCACCTGTCTCTCCAGGGATGAAACTCCCCCTCTaGGAACCACTGGCAAATTGG | + |
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Preference number: 3 (lower is better) Translates to: ISLVQMSKARISPPVSPGMKLPL*EPLANW Trigger: CCAATTTGCCAGTGGTTCCAAGAGGGGGAGTTTCAT...CCCTGGAGAGACAGGTGGGCTTATTCTGGCTTTAGACATCTGAACCAGTGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 72 bp | TTGGGGGAAAGGAAGCAAGCGCTATATCCTCAGTGGTaGGTTCATTACAACTTCAGAGGGATTCCACCAGAC | + |
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Preference number: 3 (lower is better) Translates to: LGERKQALYPQW*VHYNFRGIPPD Trigger: GTCTGGTGGAATCCCTCTGAAGTTGTAATGAACTCACCACTGAGGATATAGCGCTTGCTTCCTTTCCCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| 3UTR TCA 72 bp | GTGTTTAAGCGACAATTAGAGATGCAACTCTCCTTCTaGGAGGCCCACCCTGCAAGTGTTTCCTTCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: VFKRQLEMQLSF*EAHPASVSFSE Trigger: CTCAGAGAAGGAAACACTTGCAGGGTGGGCCTCTCAGAAGGAGAGTTGCATCTCTAATTGTCGCTTAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR GCA 72 bp | CTGCCGTGTGGCTTTTGTCATGGCATGGCTTCCTGTTaGCTTTCACTTTGGCCTGTTTTTCCCTGCTTTATT | + |
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Preference number: 3 (lower is better) Translates to: LPCGFCHGMASC*LSLWPVFPCFI Trigger: AATAAAGCAGGGAAAAACAGGCCAAAGTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 72 bp | AAGGGTGAGGTTATGGAGTCTGTGGACTGGGGAGAGTaGTTTCCACTTAACAGAATGAGAGGGTATCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: KGEVMESVDWGE*FPLNRMRGYPL Trigger: AAGAGGATACCCTCTCATTCTGTTAAGTGGAAACCACTCTCCCCAGTCCACAGACTCCATAACCTCACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 72 bp | CTGTGGACTGGGGAGAGTGGTTTCCACTTAACAGAATaGGAGGGTATCCTCTTACCTGGGAATGTATCATAC | + |
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Preference number: 3 (lower is better) Translates to: LWTGESGFHLTE*EGILLPGNVSY Trigger: GTATGATACATTCCCAGGTAAGAGGATACCCTCTCATTCTGTTAAGTGGAAACCACTCTCCCCAGTCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CAA 90 bp | GGTTTCTTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTAAGCAGACAACTCTCTaGAGGCCCAGACACACTTTC | + |
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Preference number: 3 (lower is better) Translates to: GFLLPICQSHGTCHYTTCKQTTL*RPRHTF Trigger: GAAAGTGTGTCTGGGCCTCAAGAGAGTTGTCTGCTT...ACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAAGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| 3UTR-3UTR CAA 90 bp | AGGAAACGAGGCAGAAGGCCAGCTTGGACCAAGCAGCAACAAGCAAAACAAAACCCTAGCATGGTCTCTTaGTATTTCTCTTCAGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: RKRGRRPAWTKQQQAKQNPSMVS*YFSSVV Trigger: AACTACTGAAGAGAAATACAAAGAGACCATGCTAGG...GTTTTGTTTTGCTTGTTGCTGCTTGGTCCAAGCTGGCCTTCTGCCTCGTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 72 bp | TCCATCATTTCAGACATTAGTGTGAGGCCAAACTTCTaGAGTAGAAGAAAGCTGTTCACCACAGCTCGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SIISDISVRPNF*SRRKLFTTARP Trigger: AGGCCGAGCTGTGGTGAACAGCTTTCTTCTACTTCAGAAGTTTGGCCTCACACTAATGTCTGAAATGATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR-3UTR CAA 90 bp | ACATTCGTGGAAGAAGCTAAGAGAGTGTGCATCCAATCACAGTTTATAGCGGGTCCCAGACACACTTTCTaGCTGTATTATGTTGTTCGC | + |
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Preference number: 3 (lower is better) Translates to: TFVEEAKRVCIQSQFIAGPRHTF*LYYVVR Trigger: GCGAACAACATAATACAGCAAGAAAGTGTGTCTGGG...ACCCGCTATAAACTGTGATTGGATGCACACTCTCTTAGCTTCTTCCACGAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTGCCCCAGACACACTTTCTaGCTGTATTATGTTGTTCGC | + |
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Preference number: 3 (lower is better) Translates to: FLIANLPVTWNMSLHHLCPRHTF*LYYVVR Trigger: GCGAACAACATAATACAGCAAGAAAGTGTGTCTGGG...GCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| 3UTR TCA 72 bp | CTCCTAGCTAGACCTCCATCATTTCAGACATTAGTGTaGGGCCAAACTTCTGAAGTAGAAGAAAGCTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: LLARPPSFQTLV*GQTSEVEESCS Trigger: TGAACAGCTTTCTTCTACTTCAGAAGTTTGGCCTCACACTAATGTCTGAAATGATGGAGGTCTAGCTAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR TCA 72 bp | AACTCAGGTCACCTGATGTACAAGCACTTTTGCCACTaGACTGTCTTGCCCATTATTTGGATATTTTTAACC | + |
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Preference number: 3 (lower is better) Translates to: NSGHLMYKHFCH*TVLPIIWIFLT Trigger: GGTTAAAAATATCCAAATAATGGGCAAGACAGTTCAGTGGCAAAAGTGCTTGTACATCAGGTGACCTGAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR GCA 72 bp | TTTATCTATAACGGGATCCAATTCCTTTTTCTGGCATaGAGGAGTACATGCAGACAGAGCACTCATATACAT | + |
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Preference number: 3 (lower is better) Translates to: FIYNGIQFLFLA*RSTCRQSTHIH Trigger: ATGTATATGAGTGCTCTGTCTGCATGTACTCCTGCATGCCAGAAAAAGGAATTGGATCCCGTTATAGATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR GCA 72 bp | GGGATCCAATTCCTTTTTCTGGCATGCAGGAGTACATaGAGACAGAGCACTCATATACATAAAATAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: GIQFLFLACRST*RQSTHIHKINK Trigger: TTTGTTTATTTTATGTATATGAGTGCTCTGTCTGCATGTACTCCTGCATGCCAGAAAAAGGAATTGGATCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CCA 72 bp | TGGCATTTTACTCAGGATAACTTATTTCATGAACAGTaGGACTGTAGTAGTCTGAATCTTAGATGGAATAGC | + |
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Preference number: 3 (lower is better) Translates to: WHFTQDNLFHEQ*DCSSLNLRWNS Trigger: GCTATTCCATCTAAGATTCAGACTACTACAGTCCCACTGTTCATGAAATAAGTTATCCTGAGTAAAATGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | GGCAAAGCAAAAGCTCTCATTGGTGGGCAGGTCTCTTaGGTCACTGCATGGCTGGCCAGGGCACCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GKAKALIGGQVS*VTAWLARAPSF Trigger: GAAGCTGGGTGCCCTGGCCAGCCATGCAGTGACCAAAGAGACCTGCCCACCAATGAGAGCTTTTGCTTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | GCTTCTCTACAGTATCTGCTCTTGCAAGTGCACACCTaGCAGGCTGTGCTCAGCGCGAAGGACAGGGTGACT | + |
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Preference number: 4 (lower is better) Translates to: ASLQYLLLQVHT*QAVLSAKDRVT Trigger: AGTCACCCTGTCCTTCGCGCTGAGCACAGCCTGCAAGGTGTGCACTTGCAAGAGCAGATACTGTAGAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | CCAGCTTGGCTGGGGTCACAAGAACTAGTTAGAACGTaGCTTTGGCCAGGGTGGGGAAATCAAGAAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PAWLGSQELVRT*LWPGWGNQEAG Trigger: GCCAGCTTCTTGATTTCCCCACCCTGGCCAAAGCAACGTTCTAACTAGTTCTTGTGACCCCAGCCAAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | AAGAAGCTCCACAAAGCTTCTCTACAGTATCTGCTCTaGCAAGTGCACACCTTGCAGGCTGTGCTCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: KKLHKASLQYLL*QVHTLQAVLSA Trigger: CGCGCTGAGCACAGCCTGCAAGGTGTGCACTTGCAAGAGCAGATACTGTAGAGAAGCTTTGTGGAGCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | GGTTTTACCCACCGAGTCATCCCTGCCGTGTGGCTTTaGTCATGGCATGGCTTCCTGTTGCCTTTCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: GFTHRVIPAVWL*SWHGFLLPFTL Trigger: CAAAGTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGGGATGACTCGGTGGGTAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | ACATGTCATTACACCACTTGTGCAGGACACCGATTGTaGGGGGAAAGGAAGCAAGCGCTATATCCTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TCHYTTCAGHRL*GERKQALYPQW Trigger: CCACTGAGGATATAGCGCTTGCTTCCTTTCCCCCAACAATCGGTGTCCTGCACAAGTGGTGTAATGACATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| 3UTR CAA 72 bp | CCTGCCGTGTGGCTTTTGTCATGGCATGGCTTCCTGTaGCCTTTCACTTTGGCCTGTTTTTCCCTGCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: PAVWLLSWHGFL*PFTLACFSLLY Trigger: ATAAAGCAGGGAAAAACAGGCCAAAGTGAAAGGCAACAGGAAGCCATGCCATGACAAAAGCCACACGGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| CDS-3UTR TCA 90 bp | GACAGGGAGTATGAGGATGGGGAGGAGGGCTACCTCGAGCTGTTTCACATCAGAATCTGGCATAGCGTTTaGTGTATTCATCCACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: DREYEDGEEGYLELFHIRIWHSV*CIHPLC Trigger: ACAAAGTGGATGAATACATCAAACGCTATGCCAGAT...TCTGATGTGAAACAGCTCGAGGTAGCCCTCCTCCCCATCCTCATACTCCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| 3UTR CAA 72 bp | TTTCCCATAGAGGGCTGGCCCCACCTCTTCACAAGTTaGAGGATCATACTTCCTTGGCAGACTAGAAACTAC | + |
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Preference number: 4 (lower is better) Translates to: FPIEGWPHLFTS*RIILPWQTRNY Trigger: GTAGTTTCTAGTCTGCCAAGGAAGTATGATCCTCAAACTTGTGAAGAGGTGGGGCCAGCCCTCTATGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | TACATGCTCTTTATCTCAGGGTGTAAAGGCACTACTTaGAGGCCAGGGACCTCAATGACTGTTTCCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YMLFISGCKGTT*RPGTSMTVSCG Trigger: CCCACAGGAAACAGTCATTGAGGTCCCTGGCCTCAAAGTAGTGCCTTTACACCCTGAGATAAAGAGCATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| 3UTR CAA 72 bp | ATTATGGCGTATGCTGCAGCTATGAAACTCCCCCTCTaGGAACCACTGGCAAATTGGAAGACAGTCATAATG | + |
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Preference number: 4 (lower is better) Translates to: IMAYAAAMKLPL*EPLANWKTVIM Trigger: CATTATGACTGTCTTCCAATTTGCCAGTGGTTCCAAGAGGGGGAGTTTCATAGCTGCAGCATACGCCATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171165.8 |
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| CDS-3UTR TCA 90 bp | ACATTCGTGGAAGAAGCTAAGAGAGTGTGCATCCAATCACAGTTTATAGCGGGTATCTGGCATAGCGTTTaGTGTATTCATCCACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: TFVEEAKRVCIQSQFIAGIWHSV*CIHPLC Trigger: ACAAAGTGGATGAATACATCAAACGCTATGCCAGAT...ACCCGCTATAAACTGTGATTGGATGCACACTCTCTTAGCTTCTTCCACGAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 |
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| CDS-3UTR TCA 90 bp | TTCAGAGGGATTCCACCAGACAGCCTAGACAGTAGTTTCAGTAAACATGTTAAGATCTGGCATAGCGTTTaGTGTATTCATCCACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: FRGIPPDSLDSSFSKHVKIWHSV*CIHPLC Trigger: ACAAAGTGGATGAATACATCAAACGCTATGCCAGAT...CTTAACATGTTTACTGAAACTACTGTCTAGGCTGTCTGGTGGAATCCCTCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| CDS-3UTR TCA 90 bp | TTTCTTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTGCATCTGGCATAGCGTTTaGTGTATTCATCCACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: FLIANLPVTWNMSLHHLCIWHSV*CIHPLC Trigger: ACAAAGTGGATGAATACATCAAACGCTATGCCAGAT...GCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| CDS-3UTR CAA 90 bp | GACAGGGAGTATGAGGATGGGGAGGAGGGCTACCTCGAGCTGTTTCACATCAGAGATGTCCGGGATCCTTaGAGACCATCATCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DREYEDGEEGYLELFHIRDVRDP*RPSSRF Trigger: GAAGCGGGATGATGGTCTCAAAGGATCCCGGACATC...TCTGATGTGAAACAGCTCGAGGTAGCCCTCCTCCCCATCCTCATACTCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| CDS-3UTR CAA 90 bp | AGGAGGGCTACCTCGAGCTGTTTCACATCAGAGACAACTGTGACAAAGTCCTCAGATGTCCGGGATCCTTaGAGACCATCATCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRATSSCFTSETTVTKSSDVRDP*RPSSRF Trigger: GAAGCGGGATGATGGTCTCAAAGGATCCCGGACATC...TGAGGACTTTGTCACAGTTGTCTCTGATGTGAAACAGCTCGAGGTAGCCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059743.12 ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| CDS-3UTR CAA 90 bp | TATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTGCAGGACGATGTCCGGGATCCTTaGAGACCATCATCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YCQSASHMEHVITPLVQDDVRDP*RPSSRF Trigger: GAAGCGGGATGATGGTCTCAAAGGATCCCGGACATC...GTCCTGCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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| CDS-3UTR CAA 90 bp | CTTATTGCCAATCTGCCAGTCACATGGAACATGTCATTACACCACTTGTGCAGGGATGTCCGGGATCCTTaGAGACCATCATCCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LIANLPVTWNMSLHHLCRDVRDP*RPSSRF Trigger: GAAGCGGGATGATGGTCTCAAAGGATCCCGGACATC...CCTGCACAAGTGGTGTAATGACATGTTCCATGTGACTGGCAGATTGGCAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000171112.8 ENSMUST00000171165.8 ENSMUST00000178627.8 ENSMUST00000191368.7 |
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