Pregenerated sensors for UBE2D2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091896Ensembl transcript IDs: ENSMUST00000167406.2, ENSMUST00000170693.9
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAGATTGTGCTCATGTTTCCCAGGTTCGGTCAGCTACTCTTTATaGTTACAATCAATTAACTTAACAAACAGCAACCAACACCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: TRLCSCFPGSVSYSL*LQSINLTNSNQHLC Trigger: GCAAAGGTGTTGGTTGCTGTTTGTTAAGTTAATTGATTGTAATCATAAAGAGTAGCTGACCGAACCTGGGAAACATGAGCACAATCTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR CAA 90 bp | GGGGCTAAAAGGAGGAAGGCTGAAAGGGCAGGGAGATGTGAAGTGTaGGGAACAAAGCCCACCACACTTTATGTACTAACAGCTCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GAKRRKAERAGRCEV*GTKPTTLYVLTAPV Trigger: GACTGGAGCTGTTAGTACATAAAGTGTGGTGGGCTTTGTTCCCAACACTTCACATCTCCCTGCCCTTTCAGCCTTCCTCCTTTTAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR CCA 90 bp | TATGGAAAGGGGCTAAAAGGAGGAAGGCTGAAAGGGCAGGGAGATGTGAAGTGTTCTCCTATGGGTCACTaGAGCTTTTCCTCCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: YGKGLKGGRLKGQGDVKCSPMGH*SFSSHP Trigger: TGGATGGGAGGAAAAGCTCCAGTGACCCATAGGAGA...ACACTTCACATCTCCCTGCCCTTTCAGCCTTCCTCCTTTTAGCCCCTTTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTGGTGACTAAAGAGCATTGGCCTTCAAGCTGGCCTGGCTTACATTTAGGTAAGGGCAGGGAGATGTaGAGTGTTGGGAACAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ILVTKEHWPSSWPGLHLGKGREM*SVGNKA Trigger: GGCTTTGTTCCCAACACTTCACATCTCCCTGCCCTT...ACCTAAATGTAAGCCAGGCCAGCTTGAAGGCCAATGCTCTTTAGTCACCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAGATGTGAAGTGTTGGGAACAAAGCCCACCACACTTTATGTACTAACAGCTTGTCAGGTAAACATGTaGACAGGGGAAGATGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: GRCEVLGTKPTTLYVLTACQVNM*TGEDEA Trigger: CGCCTCATCTTCCCCTGTGCACATGTTTACCTGACA...AGCTGTTAGTACATAAAGTGTGGTGGGCTTTGTTCCCAACACTTCACATCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR CCA 90 bp | AACAACACAGACTCTCCAATACAAGATTGTGCTCATGTTTCCCAGGTTCGGTCAGGAGATGTGAAGTGTTaGGAACAAAGCCCACCACAC | + |
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Preference number: 2 (lower is better) Translates to: NNTDSPIQDCAHVSQVRSGDVKC*EQSPPH Trigger: GTGTGGTGGGCTTTGTTCCCAACACTTCACATCTCC...TGACCGAACCTGGGAAACATGAGCACAATCTTGTATTGGAGAGTCTGTGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | TATGGAAAGGGGCTAAAAGGAGGAAGGCTGAAAGGGCAGGGAGATGTGAAGTGTTCACCTTGCTTTTTATaGCTGTTTGAGATTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: YGKGLKGGRLKGQGDVKCSPCFL*LFEIGW Trigger: CCATCCAATCTCAAACAGTCATAAAAAGCAAGGTGA...ACACTTCACATCTCCCTGCCCTTTCAGCCTTCCTCCTTTTAGCCCCTTTCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR GCA 90 bp | GGAACAAAGCCCACCACACTTTATGTACTAACAGCTCCAGTCCATTTAAATGTTTGTCAGGTAAACATGTaGACAGGGGAAGATGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: GTKPTTLYVLTAPVHLNVCQVNM*TGEDEA Trigger: CGCCTCATCTTCCCCTGTGCACATGTTTACCTGACA...AACATTTAAATGGACTGGAGCTGTTAGTACATAAAGTGTGGTGGGCTTTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR CCA 90 bp | GGAACAAAGCCCACCACACTTTATGTACTAACAGCTCCAGTCCATTTAAATGTTTCTCCTATGGGTCACTaGAGCTTTTCCTCCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: GTKPTTLYVLTAPVHLNVSPMGH*SFSSHP Trigger: TGGATGGGAGGAAAAGCTCCAGTGACCCATAGGAGA...AACATTTAAATGGACTGGAGCTGTTAGTACATAAAGTGTGGTGGGCTTTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTGGTGACTAAAGAGCATTGGCCTTCAAGCTGGCCTGGCTTACATTTAGGTCTTTTTATGACTGTTTaGGATTGGATGGACTCCACT | + |
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Preference number: 2 (lower is better) Translates to: ILVTKEHWPSSWPGLHLGLFMTV*DWMDST Trigger: AGTGGAGTCCATCCAATCTCAAACAGTCATAAAAAG...ACCTAAATGTAAGCCAGGCCAGCTTGAAGGCCAATGCTCTTTAGTCACCAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTTGGTGACTAAAGAGCATTGGCCTTCAAGCTGGCCTGGCTTACATTTAGGTCTACCCCTCACATCTTaGCATTATCCAAAGTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: ILVTKEHWPSSWPGLHLGLPLTS*HYPKLS Trigger: ACTTAACTTTGGATAATGGCAAGATGTGAGGGGTAG...ACCTAAATGTAAGCCAGGCCAGCTTGAAGGCCAATGCTCTTTAGTCACCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAGATGTGAAGTGTTGGGAACAAAGCCCACCACACTTTATGTACTAACAGCTAGTCCATTTAAATGTTaGTCCGTTAACCTTAGACCT | + |
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Preference number: 2 (lower is better) Translates to: GRCEVLGTKPTTLYVLTASPFKC*SVNLRP Trigger: AGGTCTAAGGTTAACGGATCAACATTTAAATGGACT...AGCTGTTAGTACATAAAGTGTGGTGGGCTTTGTTCCCAACACTTCACATCTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTCATGTTCCTGGAATGGTGCACATATAAGTTTCATGAAAATGCCTTTAAGCCAGATGAATCATTCGTaGACGTACAAGCTCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QSCSWNGAHISFMKMPLSQMNHS*TYKLQR Trigger: CCTCTGGAGCTTGTACGTTCACGAATGATTCATCTG...GCTTAAAGGCATTTTCATGAAACTTATATGTGCACCATTCCAGGAACATGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAGCAACCAACACCTTTGCATTCTATGCCCTATGTACCAAGAGACTGTCAGTCCATTTAAATGTTaGTCCGTTAACCTTAGACCT | + |
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Preference number: 2 (lower is better) Translates to: TNSNQHLCILCPMYQETVSPFKC*SVNLRP Trigger: AGGTCTAAGGTTAACGGATCAACATTTAAATGGACT...GACAGTCTCTTGGTACATAGGGCATAGAATGCAAAGGTGTTGGTTGCTGTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAGCAACCAACACCTTTGCATTCTATGCCCTATGTACCAAGAGACTGTCTGCAACAAATATAGATaGAAACATTTCAGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TNSNQHLCILCPMYQETVCNKYR*KHFRGE Trigger: CTCACCCCTGAAATGTTTTCATCTATATTTGTTGCA...GACAGTCTCTTGGTACATAGGGCATAGAATGCAAAGGTGTTGGTTGCTGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR CCA 90 bp | AACAACACAGACTCTCCAATACAAGATTGTGCTCATGTTTCCCAGGTTCGGTCAGTCATGTTCCTGGAATaGTGCACATATAAGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: NNTDSPIQDCAHVSQVRSVMFLE*CTYKFH Trigger: ATGAAACTTATATGTGCACCATTCCAGGAACATGAC...TGACCGAACCTGGGAAACATGAGCACAATCTTGTATTGGAGAGTCTGTGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR-3UTR TCA 90 bp | CCAATACAAGATTGTGCTCATGTTTCCCAGGTTCGGTCAGCTACTCTTTATGATTGCAACAAATATAGATaGAAACATTTCAGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PIQDCAHVSQVRSATLYDCNKYR*KHFRGE Trigger: CTCACCCCTGAAATGTTTTCATCTATATTTGTTGCA...ATCATAAAGAGTAGCTGACCGAACCTGGGAAACATGAGCACAATCTTGTATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR TCA 72 bp | TGCTCATGTTTCCCAGGTTCGGTCAGCTACTCTTTATaGTTACAATCAATTAACTTAACAAACAGCAACCAA | + |
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Preference number: 3 (lower is better) Translates to: CSCFPGSVSYSL*LQSINLTNSNQ Trigger: TTGGTTGCTGTTTGTTAAGTTAATTGATTGTAATCATAAAGAGTAGCTGACCGAACCTGGGAAACATGAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR CCA 90 bp | TGGAAAGGGGCTAAAAGGAGGAAGGCTGAAAGGGCAGGGAGATGTGAAGTGTTGATAGGGGCTGTCATTTaGCCCCATTATTGTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: WKGAKRRKAERAGRCEVLIGAVI*PHYCSL Trigger: CAGGCTACAATAATGGGGCCAAATGACAGCCCCTAT...CAACACTTCACATCTCCCTGCCCTTTCAGCCTTCCTCCTTTTAGCCCCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| 3UTR CAA 72 bp | AGGAGGAAGGCTGAAAGGGCAGGGAGATGTGAAGTGTaGGGAACAAAGCCCACCACACTTTATGTACTAACA | + |
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Preference number: 4 (lower is better) Translates to: RRKAERAGRCEV*GTKPTTLYVLT Trigger: TGTTAGTACATAAAGTGTGGTGGGCTTTGTTCCCAACACTTCACATCTCCCTGCCCTTTCAGCCTTCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR GCA 90 bp | AACAACACAGACTCTCCAATACAAGATTGTGCTCATGTTTCCCAGGTTCGGTCAAATTCTTGTTGTAAATaGAACCTTAGGCGGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: NNTDSPIQDCAHVSQVRSNSCCK*NLRRFE Trigger: TTCAAACCGCCTAAGGTTGCATTTACAACAAGAATT...TGACCGAACCTGGGAAACATGAGCACAATCTTGTATTGGAGAGTCTGTGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR GCA 90 bp | AACAAACAGCAACCAACACCTTTGCATTCTATGCCCTATGTACCAAGAGACTGTAATTCTTGTTGTAAATaGAACCTTAGGCGGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: NKQQPTPLHSMPYVPRDCNSCCK*NLRRFE Trigger: TTCAAACCGCCTAAGGTTGCATTTACAACAAGAATT...ACAGTCTCTTGGTACATAGGGCATAGAATGCAAAGGTGTTGGTTGCTGTTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR CAA 90 bp | TGGAAAGGGGCTAAAAGGAGGAAGGCTGAAAGGGCAGGGAGATGTGAAGTGTTGAGGTCATTCAATTCCTaGTGGATTCTCTTCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: WKGAKRRKAERAGRCEVLRSFNS*WILFRA Trigger: GGCTCTGAAGAGAATCCACAAGGAATTGAATGACCT...CAACACTTCACATCTCCCTGCCCTTTCAGCCTTCCTCCTTTTAGCCCCTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR CAA 90 bp | TGGAGCTTTTCCTCCCATCCAAGCACACACTGTGTACCTACTACCCCTCACATCAAAGGATCATCTGGATaGGGATCACACAACAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: WSFSSHPSTHCVPTTPHIKGSSG*GSHNRE Trigger: TTCTCTGTTGTGTGATCCCAATCCAGATGATCCTTT...GATGTGAGGGGTAGTAGGTACACAGTGTGTGCTTGGATGGGAGGAAAAGCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR CAA 90 bp | TTGAGATTGGATGGACTCCACTTAAGGACAATCTCCTATGGGTCACTGGAGCTTAAAGGATCATCTGGATaGGGATCACACAACAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LRLDGLHLRTISYGSLELKGSSG*GSHNRE Trigger: TTCTCTGTTGTGTGATCCCAATCCAGATGATCCTTT...AAGCTCCAGTGACCCATAGGAGATTGTCCTTAAGTGGAGTCCATCCAATCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR CAA 90 bp | CCAATACAAGATTGTGCTCATGTTTCCCAGGTTCGGTCAGCTACTCTTTATGATAGGTCATTCAATTCCTaGTGGATTCTCTTCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PIQDCAHVSQVRSATLYDRSFNS*WILFRA Trigger: GGCTCTGAAGAGAATCCACAAGGAATTGAATGACCT...ATCATAAAGAGTAGCTGACCGAACCTGGGAAACATGAGCACAATCTTGTATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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| CDS-3UTR CAA 90 bp | AACAAACAGCAACCAACACCTTTGCATTCTATGCCCTATGTACCAAGAGACTGTTCCCGAGCTATTCTGTaGTACTTTTCTCTATCTGTT | + |
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Preference number: 5 (lower is better) Translates to: NKQQPTPLHSMPYVPRDCSRAIL*YFSLSV Trigger: AACAGATAGAGAAAAGTACAACAGAATAGCTCGGGA...ACAGTCTCTTGGTACATAGGGCATAGAATGCAAAGGTGTTGGTTGCTGTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167406.2 ENSMUST00000170693.9 |
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