Pregenerated sensors for UBASH3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032020Ensembl transcript IDs: ENSMUST00000044155.15, ENSMUST00000129906.2, ENSMUST00000136530.8, ENSMUST00000151485.8
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATCCTCTCCCCAGTTGGATTCCAGACACAGTCCTTCCTCTTGCATaGCTCTCCGGGAGGGAGCAGCTCTCTGGGAGAAGAATGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: YPLPSWIPDTVLPLA*LSGREQLSGRRMRL Trigger: GAGCCTCATTCTTCTCCCAGAGAGCTGCTCCCTCCCGGAGAGGCATGCAAGAGGAAGGACTGTGTCTGGAATCCAACTGGGGAGAGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | CTCTTGCATGCCTCTCCGGGAGGGAGCAGCTCTCTGGGAGAAGAATaGGGCTCTTTAGCCATGCATAGCCTGAAGGAGGATGGTAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLHASPGGSSSLGEE*GSLAMHSLKEDGSF Trigger: GAAACTACCATCCTCCTTCAGGCTATGCATGGCTAAAGAGCCTCATTCTTCTCCCAGAGAGCTGCTCCCTCCCGGAGAGGCATGCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CCA 90 bp | TTCACAGATAGAAGCATGAAGGGCCAGATTGCTCTGGAGATCAAGTaGTGTGGTACCAGGGTGAATGTCGGGAGACCTCAAGTGGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: FTDRSMKGQIALEIK*CGTRVNVGRPQVGA Trigger: GGCACCCACTTGAGGTCTCCCGACATTCACCCTGGTACCACACCACTTGATCTCCAGAGCAATCTGGCCCTTCATGCTTCTATCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR GCA 90 bp | TTTCACAGGGAAACATGTAGAGTGGAAAGGAGATGTCCAGGCCAGTaGTACACACAGCAGGATCCCACCTACACGGACTCCAAACAGAAC | + |
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Preference number: 1 (lower is better) Translates to: FHRETCRVERRCPGQ*YTQQDPTYTDSKQN Trigger: GTTCTGTTTGGAGTCCGTGTAGGTGGGATCCTGCTGTGTGTAGCACTGGCCTGGACATCTCCTTTCCACTCTACATGTTTCCCTGTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CCA 90 bp | TCTATTCGGAAGATCAGCTTCCCGGCCATGGAAGCACGAACAGCATaGGGAGTGTACAAGGAACTTGGCAGACCAACTAGGTGTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: SIRKISFPAMEARTA*GVYKELGRPTRCGF Trigger: AAAACCACACCTAGTTGGTCTGCCAAGTTCCTTGTACACTCCCCATGCTGTTCGTGCTTCCATGGCCGGGAAGCTGATCTTCCGAATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | CACAGCGGCAGTGAATGGAGTCTGCTGAGGGTAGAATCTGCTGTCTaGCACAGGACTATTCTTACGGTCCCTAACAACCATCAAAGCACT | + |
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Preference number: 1 (lower is better) Translates to: HSGSEWSLLRVESAV*HRTILTVPNNHQST Trigger: AGTGCTTTGATGGTTGTTAGGGACCGTAAGAATAGTCCTGTGTCAGACAGCAGATTCTACCCTCAGCAGACTCCATTCACTGCCGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | TACCATAGAAAAGCAAAGAGGGCAGCAAAAGAAGCAGTGCAGTTGTaGCTGTCACCATTCACGTTAGTCCCTGGGCTTCCTGGACAACCT | + |
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Preference number: 1 (lower is better) Translates to: YHRKAKRAAKEAVQL*LSPFTLVPGLPGQP Trigger: AGGTTGTCCAGGAAGCCCAGGGACTAACGTGAATGGTGACAGTCACAACTGCACTGCTTCTTTTGCTGCCCTCTTTGCTTTTCTATGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CCA 90 bp | AGAAATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTaGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCATCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: RNMLNDSELSALNAA*AFPLLQGILRTHLQ Trigger: TTGCAGATGAGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| 3UTR TCA 90 bp | AATTCTGTTCTTGGAGCACAGAAACGAAGTTTTCTACAAAGGCAGTaGGCTAGGACCTTCTCTTCCTGTTGCCACTGTGTTCCCCATGAC | + |
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Preference number: 1 (lower is better) Translates to: NSVLGAQKRSFLQRQ*ARTFSSCCHCVPHD Trigger: GTCATGGGGAACACAGTGGCAACAGGAAGAGAAGGTCCTAGCTCACTGCCTTTGTAGAAAACTTCGTTTCTGTGCTCCAAGAACAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR GCA 90 bp | ACCCTCTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTaGATGAATCTCAATGCAAAGGGAAAGAGACACTGTCATCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: TLFQPSDGHVMSHSG*MNLNAKGKRHCHLN Trigger: ATTCAGATGACAGTGTCTCTTTCCCTTTGCATTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAGAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CCA 90 bp | CTTTCAAATGTCAATCTCCTTAACTGCTTAACACAGTCTAGAGTCTaGGTGGAAAGACACGTCCTGATTCAGGCAGGCTTGGGGACTTCA | + |
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Preference number: 1 (lower is better) Translates to: LSNVNLLNCLTQSRV*VERHVLIQAGLGTS Trigger: TGAAGTCCCCAAGCCTGCCTGAATCAGGACGTGTCTTTCCACCCAGACTCTAGACTGTGTTAAGCAGTTAAGGAGATTGACATTTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | TCAGGGTCTACTGCCAGCAGAGACATTCTGTATGCATATGAAGTCTaGCTATCCAGATATCTCTCTACACACAGATTCAGTGTGACTCCC | + |
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Preference number: 1 (lower is better) Translates to: SGSTASRDILYAYEV*LSRYLSTHRFSVTP Trigger: GGGAGTCACACTGAATCTGTGTGTAGAGAGATATCTGGATAGTCAGACTTCATATGCATACAGAATGTCTCTGCTGGCAGTAGACCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CCA 90 bp | GTGAGAAAGAGACTAACATGCCTTCCTAACACAGCTGGTTCAGTGTaGTGTACGCAGGAGTCAAAGGCTCTGGGATGTTGTTTTTATCTT | + |
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Preference number: 1 (lower is better) Translates to: VRKRLTCLPNTAGSV*CTQESKALGCCFYL Trigger: AAGATAAAAACAACATCCCAGAGCCTTTGACTCCTGCGTACACCACACTGAACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | CCTCAACTCAGGGTCTACTGCCAGCAGAGACATTCTGTATGCATATaGAGTCTGACTATCCAGATATCTCTCTACACACAGATTCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: PQLRVYCQQRHSVCI*SLTIQISLYTQIQC Trigger: ACACTGAATCTGTGTGTAGAGAGATATCTGGATAGTCAGACTTCATATGCATACAGAATGTCTCTGCTGGCAGTAGACCCTGAGTTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CCA 90 bp | GATGCTTCAACGACACATTTGTTTTACATCCGTGTTCCTTCTCAGTaGCCAGGGTTTCAATTTGCACACACACGCTACACAACGAACTAT | + |
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Preference number: 1 (lower is better) Translates to: DASTTHLFYIRVPSQ*PGFQFAHTRYTTNY Trigger: ATAGTTCGTTGTGTAGCGTGTGTGTGCAAATTGAAACCCTGGCCACTGAGAAGGAACACGGATGTAAAACAAATGTGTCGTTGAAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR GCA 90 bp | CTTTTTCTCCTCCTCACGTGCATGTGCCGGATTAGACAATTTAAATaGAAATCTCCAGGAGTCTCATTATCCAACTTTGTGCAGATTTGG | + |
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Preference number: 1 (lower is better) Translates to: LFLLLTCMCRIRQFK*KSPGVSLSNFVQIW Trigger: CCAAATCTGCACAAAGTTGGATAATGAGACTCCTGGAGATTTGCATTTAAATTGTCTAATCCGGCACATGCACGTGAGGAGGAGAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | ATGAAGTCTGACTATCCAGATATCTCTCTACACACAGATTCAGTGTaGCTCCCAAGACTGCTCAACTGGACCCAACCTTTAATTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: MKSDYPDISLHTDSV*LPRLLNWTQPLILF Trigger: AAAAAGAATTAAAGGTTGGGTCCAGTTGAGCAGTCTTGGGAGTCACACTGAATCTGTGTGTAGAGAGATATCTGGATAGTCAGACTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | TTTATTAAGTCATCTCTGAACCATATCATGTCAGTGGATATGAACTaGTCACAAAGCTGCCATAGCTCTATTCGGAAGATCAGCTTCCCG | + |
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Preference number: 1 (lower is better) Translates to: FIKSSLNHIMSVDMN*SQSCHSSIRKISFP Trigger: CGGGAAGCTGATCTTCCGAATAGAGCTATGGCAGCTTTGTGATCAGTTCATATCCACTGACATGATATGGTTCAGAGATGACTTAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 90 bp | TATACATTGTTTCCGTTTAAAACATGTATCACATACAGGGTTCCATaGATAGTTGAACAGCTGCAAAATTTCTGTGCAAGGAACAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: YTLFPFKTCITYRVP*IVEQLQNFCARNSG Trigger: GCCACTGTTCCTTGCACAGAAATTTTGCAGCTGTTCAACTATTCATGGAACCCTGTATGTGATACATGTTTTAAACGGAAACAATGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR CCA 90 bp | CGGAAGATCAGCTTCCCGGCCATGGAAGCACGAACAGCATGGGGAGTGTACAAGGAGGGAGCAGCTCTCTaGGAGAAGAATGAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RKISFPAMEARTAWGVYKEGAAL*EKNEAL Trigger: AAGAGCCTCATTCTTCTCCCAGAGAGCTGCTCCCTC...CTTGTACACTCCCCATGCTGTTCGTGCTTCCATGGCCGGGAAGCTGATCTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR TCA 90 bp | TCAACTCAGGGTCTACTGCCAGCAGAGCTAGCCTCAACTCAGGGTCTACTGCCACATCACTCGTTCTCTTaGTCCCTCCTGAGTATCTCA | + |
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Preference number: 2 (lower is better) Translates to: STQGLLPAELASTQGLLPHHSFS*SLLSIS Trigger: TGAGATACTCAGGAGGGATCAAGAGAACGAGTGATG...TGGCAGTAGACCCTGAGTTGAGGCTAGCTCTGCTGGCAGTAGACCCTGAGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR CCA 90 bp | TCAACTCAGGGTCTACTGCCAGCAGAGCTAGCCTCAACTCAGGGTCTACTGCCATATCCTCTCCCCAGTTaGATTCCAGACACAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: STQGLLPAELASTQGLLPYPLPS*IPDTVL Trigger: AAGGACTGTGTCTGGAATCCAACTGGGGAGAGGATA...TGGCAGTAGACCCTGAGTTGAGGCTAGCTCTGCTGGCAGTAGACCCTGAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CAA 90 bp | GCCTGGGAAAAGGGCAGCCTCAGTGTGTGTATTAACACGCACCAATaGTTCCAGTCAGACACCCAGAAATCACAGGGACAAAGTCCTACC | + |
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Preference number: 2 (lower is better) Translates to: AWEKGSLSVCINTHQ*FQSDTQKSQGQSPT Trigger: GGTAGGACTTTGTCCCTGTGATTTCTGGGTGTCTGACTGGAACAATTGGTGCGTGTTAATACACACACTGAGGCTGCCCTTTTCCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | CGGAAGATCAGCTTCCCGGCCATGGAAGCACGAACAGCATGGGGAGTGTACAAGAGAGCAATTCACCACTaGTTTGAAATGAAACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RKISFPAMEARTAWGVYKRAIHH*FEMKPS Trigger: GCTGGGTTTCATTTCAAAGCAGTGGTGAATTGCTCT...CTTGTACACTCCCCATGCTGTTCGTGCTTCCATGGCCGGGAAGCTGATCTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTGCATGAATCTCAAGCAGTGAGAAGAGCCTaGGAAAAGGGCAGCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LSAIRWPRNEPFRLHESQAVRRA*EKGSLS Trigger: ACTGAGGCTGCCCTTTTCCCAGGCTCTTCTCACTGC...TTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | TCAACTCAGGGTCTACTGCCAGCAGAGCTAGCCTCAACTCAGGGTCTACTGCCAGTCAATCTCCTTAACTaGTTAACACAGTCTAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: STQGLLPAELASTQGLLPVNLLN*LTQSRV Trigger: GACTCTAGACTGTGTTAAGCAGTTAAGGAGATTGAC...TGGCAGTAGACCCTGAGTTGAGGCTAGCTCTGCTGGCAGTAGACCCTGAGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTGCATGAATCTCAATCATCTGAATGTTACTaGGACCCCAGGGTGAACCAA | + |
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Preference number: 2 (lower is better) Translates to: LSAIRWPRNEPFRLHESQSSECY*DPRVNQ Trigger: TTGGTTCACCCTGGGGTCCCAGTAACATTCAGATGA...TTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CAA 90 bp | CTAAGCATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTaGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSMKRNMLNDSELSA*NAAWAFPLLQGILR Trigger: CCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCATGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| 3UTR CAA 90 bp | ATCTCCAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTaGACTGTGCCGATGCCTGTGAAACTTAGTGGGAGGCTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: ISRSLIIQLCADLVQ*TVPMPVKLSGRLIC Trigger: ACAGATGAGCCTCCCACTAAGTTTCACAGGCATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTGGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGTCTCACGCGTGAGAAAGAGACTAACATGCCTTCCTAACACAGCTGGTTTTCTCCTCCTCACGTaGATGTGCCGGATTAGACAA | + |
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Preference number: 2 (lower is better) Translates to: TKVSRVRKRLTCLPNTAGFLLLT*MCRIRQ Trigger: TTGTCTAATCCGGCACATGCACGTGAGGAGGAGAAA...ACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCACGCGTGAGACTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CAA 90 bp | AACTTTTCTGTTATCCACTTAAGTTCTTCAGAAAGTTACTTCAGATaGTGCCCTCCCTGGCTCTGTAGACAGTTGCCCAGGACGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: NFSVIHLSSSESYFR*CPPWLCRQLPRTLS Trigger: AGACAGCGTCCTGGGCAACTGTCTACAGAGCCAGGGAGGGCACAATCTGAAGTAACTTTCTGAAGAACTTAAGTGGATAACAGAAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGTGTATTAACACGCACCAATTGTTCCAGTCAGACACCCAGAAATCACAGAGTACAGGAAGTAGGTaGAGTGAGAGCCCACAGATA | + |
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Preference number: 2 (lower is better) Translates to: SVCINTHQLFQSDTQKSQSTGSR*SESPQI Trigger: TATCTGTGGGCTCTCACTGCACCTACTTCCTGTACT...CTGTGATTTCTGGGTGTCTGACTGGAACAATTGGTGCGTGTTAATACACACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | ACGTGCATGTGCCGGATTAGACAATTTAAATGCAAATCTCCAGGAGTCTCATTAGGCTCTGTAGACAGTTaGCCAGGACGCTGTCTATAT | + |
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Preference number: 2 (lower is better) Translates to: TCMCRIRQFKCKSPGVSLGSVDS*PGRCLY Trigger: ATATAGACAGCGTCCTGGGCAACTGTCTACAGAGCC...TAATGAGACTCCTGGAGATTTGCATTTAAATTGTCTAATCCGGCACATGCACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR TCA 90 bp | CCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATTGCTACAGGGCATCCTaGGGACTCATCTGCAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLSMKRNMLNDSELSALNCYRAS*GLICKR Trigger: CCTTTTGCAGATGAGTCCTCAGGATGCCCTGTAGCA...ATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCATGCTTAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| 3UTR-3UTR TCA 90 bp | ACGTGCATGTGCCGGATTAGACAATTTAAATGCAAATCTCCAGGAGTCTCATTATCTCTGGGAGAAGAATaGGGCTCTTTAGCCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: TCMCRIRQFKCKSPGVSLSLGEE*GSLAMH Trigger: ATGCATGGCTAAAGAGCCTCATTCTTCTCCCAGAGA...TAATGAGACTCCTGGAGATTTGCATTTAAATTGTCTAATCCGGCACATGCACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATATGAGCCATTCAGGCTaGATGAATCTCAATGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QESHYPTLCRFGTVDCADMSHSG*MNLNAK Trigger: CTTTGCATTGAGATTCATGCAGCCTGAATGGCTCAT...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATGCTTTGAATGCAGCGTaGGCTTTCCCACTGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: FLSQSHRPLSMKRNMLNDALNAA*AFPLLQ Trigger: CTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGC...ATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| 3UTR CAA 90 bp | ACATGCACATACAGGCACATACAATGTGATGCTTCAACGACACATTaGTTTTACATCCGTGTTCCTTCTCAGTGGCCAGGGTTTCAATTT | + |
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Preference number: 2 (lower is better) Translates to: TCTYRHIQCDASTTH*FYIRVPSQWPGFQF Trigger: AAATTGAAACCCTGGCCACTGAGAAGGAACACGGATGTAAAACAAATGTGTCGTTGAAGCATCACATTGTATGTGCCTGTATGTGCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCAACCAAAGAACCAGTATACATTGTTTCCGTTTAAAACATGTATCACATCCCACAGATAGGCTCTaGCTCTCCAGCTTCCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SGNQRTSIHCFRLKHVSHPTDRL*LSSFLQ Trigger: TTGAAGGAAGCTGGAGAGTCAGAGCCTATCTGTGGG...ATGTGATACATGTTTTAAACGGAAACAATGTATACTGGTTCTTTGGTTGCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATCATTCTGTATGCATATaGAGTCTGACTATCCAGATA | + |
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Preference number: 2 (lower is better) Translates to: QESHYPTLCRFGTVDCADHSVCI*SLTIQI Trigger: TATCTGGATAGTCAGACTTCATATGCATACAGAATG...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | ACGTGCATGTGCCGGATTAGACAATTTAAATGCAAATCTCCAGGAGTCTCATTACTGCATGAATCTCAATaGAAAGGGAAAGAGACACTG | + |
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Preference number: 2 (lower is better) Translates to: TCMCRIRQFKCKSPGVSLLHESQ*KGKETL Trigger: CAGTGTCTCTTTCCCTTTGCATTGAGATTCATGCAG...TAATGAGACTCCTGGAGATTTGCATTTAAATTGTCTAATCCGGCACATGCACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CAA 90 bp | TTAGACAATTTAAATGCAAATCTCCAGGAGTCTCATTATCCAACTTaGTGCAGATTTGGTACAGTTGACTGTGCCGATGCCTGTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: LDNLNANLQESHYPT*CRFGTVDCADACET Trigger: AGTTTCACAGGCATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTGGAGATTTGCATTTAAATTGTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR CCA 90 bp | TATATTGGATTAAGGACAATGGAATACAGCCCAATCAAAGTGATGCATTTACCTAAATGGGCTAACCTATaGACATTCTGCTACAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: YIGLRTMEYSPIKVMHLPKWANL*TFCYSG Trigger: TCCACTGTAGCAGAATGTCCATAGGTTAGCCCATTT...AGGTAAATGCATCACTTTGATTGGGCTGTATTCCATTGTCCTTAATCCAATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR-3UTR GCA 90 bp | TATATTGGATTAAGGACAATGGAATACAGCCCAATCAAAGTGATGCATTTACCTTGGCTTTCCCTAACTTaGAAATGGAGTACAAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: YIGLRTMEYSPIKVMHLPWLSLT*KWSTKR Trigger: TCTTTTTGTACTCCATTTGCAAGTTAGGGAAAGCCA...AGGTAAATGCATCACTTTGATTGGGCTGTATTCCATTGTCCTTAATCCAATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR GCA 72 bp | TCTCCCCAGTTGGATTCCAGACACAGTCCTTCCTCTTaGATGCCTCTCCGGGAGGGAGCAGCTCTCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SPQLDSRHSPSS*MPLREGAALWE Trigger: CTCCCAGAGAGCTGCTCCCTCCCGGAGAGGCATGCAAGAGGAAGGACTGTGTCTGGAATCCAACTGGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR TCA 72 bp | GTCGGGAGACCTCAAGTGGGTGCCTCACAGCGGCAGTaGATGGAGTCTGCTGAGGGTAGAATCTGCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VGRPQVGASQRQ*MESAEGRICCL Trigger: CAGACAGCAGATTCTACCCTCAGCAGACTCCATTCACTGCCGCTGTGAGGCACCCACTTGAGGTCTCCCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CCA 72 bp | AGGGCCCCTCACAGCCAAGCAGCAGTGAGAAGAGCCTaGGAAAAGGGCAGCCTCAGTGTGTGTATTAACACG | + |
|
Preference number: 3 (lower is better) Translates to: RAPHSQAAVRRA*EKGSLSVCINT Trigger: CGTGTTAATACACACACTGAGGCTGCCCTTTTCCCAGGCTCTTCTCACTGCTGCTTGGCTGTGAGGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CCA 72 bp | TGCAAAGGGAAAGAGACACTGTCATCTGAATGTTACTaGGACCCCAGGGTGAACCAAAGGGCCCCTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CKGKETLSSECY*DPRVNQRAPHS Trigger: GCTGTGAGGGGCCCTTTGGTTCACCCTGGGGTCCCAGTAACATTCAGATGACAGTGTCTCTTTCCCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CCA 72 bp | AGAAGCATGAAGGGCCAGATTGCTCTGGAGATCAAGTaGTGTGGTACCAGGGTGAATGTCGGGAGACCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RSMKGQIALEIK*CGTRVNVGRPQ Trigger: TTGAGGTCTCCCGACATTCACCCTGGTACCACACCACTTGATCTCCAGAGCAATCTGGCCCTTCATGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR TCA 72 bp | AAAGCAAAGAGGGCAGCAAAAGAAGCAGTGCAGTTGTaGCTGTCACCATTCACGTTAGTCCCTGGGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KAKRAAKEAVQL*LSPFTLVPGLP Trigger: AGGAAGCCCAGGGACTAACGTGAATGGTGACAGTCACAACTGCACTGCTTCTTTTGCTGCCCTCTTTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CCA 72 bp | CTGGGCTTCCTGGACAACCTAAAATGGGCTAACCTATaGACATTCTGCTACAGTGGACATGGCCTGTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGFLDNLKWANL*TFCYSGHGLYV Trigger: CACATACAGGCCATGTCCACTGTAGCAGAATGTCCATAGGTTAGCCCATTTTAGGTTGTCCAGGAAGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CCA 72 bp | CCACAGATAGGCTCTGACTCTCCAGCTTCCTTCAAGTaGTCCTCCCTCCCGTCTGTTCTAAATTACCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: PQIGSDSPASFK*SSLPSVLNYHR Trigger: TCTATGGTAATTTAGAACAGACGGGAGGGAGGACCACTTGAAGGAAGCTGGAGAGTCAGAGCCTATCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CCA 72 bp | AGACTAACATGCCTTCCTAACACAGCTGGTTCAGTGTaGTGTACGCAGGAGTCAAAGGCTCTGGGATGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLTCLPNTAGSV*CTQESKALGCC Trigger: ACAACATCCCAGAGCCTTTGACTCCTGCGTACACCACACTGAACCAGCTGTGTTAGGAAGGCATGTTAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR TCA 72 bp | CATTCAACACACATCACTCGTTCTCTTGATCCCTCCTaGGTATCTCAACGTGCAAAGGGCTGTTCTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HSTHITRSLDPS*VSQRAKGCSPH Trigger: ATGGGGAGAACAGCCCTTTGCACGTTGAGATACTCAGGAGGGATCAAGAGAACGAGTGATGTGTGTTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR GCA 72 bp | ACTTCAGATTGTGCCCTCCCTGGCTCTGTAGACAGTTaGCCAGGACGCTGTCTATATTGGATTAAGGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSDCALPGSVDS*PGRCLYWIKDN Trigger: ATTGTCCTTAATCCAATATAGACAGCGTCCTGGGCAACTGTCTACAGAGCCAGGGAGGGCACAATCTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR GCA 72 bp | ATCCACTTAAGTTCTTCAGAAAGTTACTTCAGATTGTaGCCTCCCTGGCTCTGTAGACAGTTGCCCAGGACG | + |
|
Preference number: 3 (lower is better) Translates to: IHLSSSESYFRL*PPWLCRQLPRT Trigger: CGTCCTGGGCAACTGTCTACAGAGCCAGGGAGGGCACAATCTGAAGTAACTTTCTGAAGAACTTAAGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR GCA 72 bp | GACACAAAAGTCTCACGCGTGAGAAAGAGACTAACATaGCTTCCTAACACAGCTGGTTCAGTGTGGTGTACG | + |
|
Preference number: 3 (lower is better) Translates to: DTKVSRVRKRLT*LPNTAGSVWCT Trigger: CGTACACCACACTGAACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCACGCGTGAGACTTTTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR GCA 72 bp | CCATCAAAGCACTCCTCAGTGTGGCTTTCCCTAACTTaGAAATGGAGTACAAAAAGACTATCCTCTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSKHSSVWLSLT*KWSTKRLSSPQ Trigger: CTGGGGAGAGGATAGTCTTTTTGTACTCCATTTGCAAGTTAGGGAAAGCCACACTGAGGAGTGCTTTGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR-3UTR CAA 90 bp | TTTAACCTACACACAGCAAACCTAATACTATATGTATGTAACAGCCCAGCTATTACACAGTCCTTCCTCTaGCATGCCTCTCCGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FNLHTANLILYVCNSPAITQSFL*HASPGG Trigger: CCCTCCCGGAGAGGCATGCAAGAGGAAGGACTGTGT...AATAGCTGGGCTGTTACATACATATAGTATTAGGTTTGCTGTGTGTAGGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR TCA 72 bp | GACTATCCAGATATCTCTCTACACACAGATTCAGTGTaGCTCCCAAGACTGCTCAACTGGACCCAACCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: DYPDISLHTDSV*LPRLLNWTQPL Trigger: TAAAGGTTGGGTCCAGTTGAGCAGTCTTGGGAGTCACACTGAATCTGTGTGTAGAGAGATATCTGGATAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR TCA 72 bp | AGGGTCTACTGCCAGCAGAGACATTCTGTATGCATATaGAGTCTGACTATCCAGATATCTCTCTACACACAG | + |
|
Preference number: 3 (lower is better) Translates to: RVYCQQRHSVCI*SLTIQISLYTQ Trigger: CTGTGTGTAGAGAGATATCTGGATAGTCAGACTTCATATGCATACAGAATGTCTCTGCTGGCAGTAGACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR GCA 72 bp | CCACGTAATGAGCCATTCAGGCTGCATGAATCTCAATaGAAAGGGAAAGAGACACTGTCATCTGAATGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PRNEPFRLHESQ*KGKETLSSECY Trigger: GTAACATTCAGATGACAGTGTCTCTTTCCCTTTGCATTGAGATTCATGCAGCCTGAATGGCTCATTACGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR TCA 72 bp | TCATCTCTGAACCATATCATGTCAGTGGATATGAACTaGTCACAAAGCTGCCATAGCTCTATTCGGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SSLNHIMSVDMN*SQSCHSSIRKI Trigger: GATCTTCCGAATAGAGCTATGGCAGCTTTGTGATCAGTTCATATCCACTGACATGATATGGTTCAGAGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR TCA 72 bp | AATGGAATACAGCCCAATCAAAGTGATGCATTTACCTaGACACCTAAGACTAAGACATACATGCACATACAG | + |
|
Preference number: 3 (lower is better) Translates to: NGIQPNQSDAFT*TPKTKTYMHIQ Trigger: CTGTATGTGCATGTATGTCTTAGTCTTAGGTGTTCAGGTAAATGCATCACTTTGATTGGGCTGTATTCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR TCA 72 bp | TTTCCGTTTAAAACATGTATCACATACAGGGTTCCATaGATAGTTGAACAGCTGCAAAATTTCTGTGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FPFKTCITYRVP*IVEQLQNFCAR Trigger: CCTTGCACAGAAATTTTGCAGCTGTTCAACTATTCATGGAACCCTGTATGTGATACATGTTTTAAACGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | GTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACCGCGGGGAAAGCCCATaGACAGGAGCACGTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VCFECSVGFPTATGHPEDRGESP*TGARPA Trigger: CGCTGGACGTGCTCCTGTCCATGGGCTTTCCCCGCG...GTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | CGGAAGATCAGCTTCCCGGCCATGGAAGCACGAACAGCATGGGGAGTGTACAAGGGTCCCTGCGCGGGGTaGCTTTGCTGTACAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKISFPAMEARTAWGVYKGPCAG*LCCTAP Trigger: AGGAGCTGTACAGCAAAGTCACCCCGCGCAGGGACC...CTTGTACACTCCCCATGCTGTTCGTGCTTCCATGGCCGGGAAGCTGATCTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | CGGAAGATCAGCTTCCCGGCCATGGAAGCACGAACAGCATGGGGAGTGTACAAGGTCCAGGCTGGCTGTTaGCTCTCAGGGGCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RKISFPAMEARTAWGVYKVQAGC*LSGAAW Trigger: CCATGCAGCCCCTGAGAGTCAACAGCCAGCCTGGAC...CTTGTACACTCCCCATGCTGTTCGTGCTTCCATGGCCGGGAAGCTGATCTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CAA 72 bp | CTCTCCCCAGTTGGATTCCAGACACAGTCCTTCCTCTaGCATGCCTCTCCGGGAGGGAGCAGCTCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPVGFQTQSFL*HASPGGSSSLG Trigger: TCCCAGAGAGCTGCTCCCTCCCGGAGAGGCATGCAAGAGGAAGGACTGTGTCTGGAATCCAACTGGGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCATCTGCAAAAGGCCAGTGGGTGGGTAGGTGGCTaGCTTGGAAGTGGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WAFPLLQGILRTHLQKASGWVGG*LGSGRP Trigger: TGGCCTACCACTTCCAAGCCAGCCACCTACCCACCC...ACTGGCCTTTTGCAGATGAGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGATTGTGCCCTCCCTGGCTCTGTAGACAGTTGCCCAGGACGCTGTCTATAAAGAGGCATCGCTTCTaGGGTCCAGGCTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FRLCPPWLCRQLPRTLSIKRHRF*GPGWLL Trigger: CAACAGCCAGCCTGGACCCCAGAAGCGATGCCTCTT...TATAGACAGCGTCCTGGGCAACTGTCTACAGAGCCAGGGAGGGCACAATCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | CCCACTGCTACAGGGCATCCTGAGGACTCATCTGCAAAAGGCCAGTTCTTCCCATGCAGCTGCTTCTTATaGGGCTCCACGTGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTATGHPEDSSAKGQFFPCSCFL*GSTCTS Trigger: AGAAGTGCACGTGGAGCCTCATAAGAAGCAGCTGCA...TGGGAAGAACTGGCCTTTTGCAGATGAGTCCTCAGGATGCCCTGTAGCAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTGCTACAGGGCATCCTGAGGACTCATCTGCAAAAGGCCAGTTCTTCCCATTTGGATGCAGCCTCTaGAGCAAAGTCAGCCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTATGHPEDSSAKGQFFPFGCSL*SKVSRE Trigger: TTCGCGGCTGACTTTGCTGCAGAGGCTGCATCCAAA...TGGGAAGAACTGGCCTTTTGCAGATGAGTCCTCAGGATGCCCTGTAGCAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTGGCGGGTCTGTCAGTTaGCATATTCCAGTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SALNAAWAFPLLQGILRTGGSVS*HIPVSP Trigger: GGGAGAAACTGGAATATGGCAACTGACAGACCCGCC...AGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATTCCAGACACAGTCCTTCCTCTTGCATGCCTCTCCGGGAGGGAGCAGCTCGTGCACTTCTGTTTTaGATGCAGCCTCTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSRHSPSSCMPLREGAARALLF*MQPLQQ Trigger: TTGCTGCAGAGGCTGCATCCAAAACAGAAGTGCACG...AGCTGCTCCCTCCCGGAGAGGCATGCAAGAGGAAGGACTGTGTCTGGAATCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCAGAGGCATGTTCAGGTTaGTGCGTATGTAGCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFECSVGFPTATGHPEDSEACSG*CVCSGL Trigger: AAGGCCGCTACATACGCACCAACCTGAACATGCCTC...TGAGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACACTCATCAGCCTTGGTaGTGTAGTTCTCAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCFECSVGFPTATGHPEDTHQPW*CSSQEA Trigger: TGCTTCCTGAGAACTACATCACCAAGGCTGATGAGT...GTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATCTCCAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTCCAGCGCCGACCCATaGTTGACTGTGCCCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ANLQESHYPTLCRFGTVDSSADP*LTVPGR Trigger: GCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGA...GTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTGGAGATTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | TGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCAATCTGCTTGGACTGCTaGCAGAAGTCAGAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFECSVGFPTATGHPEDSICLDC*QKSESF Trigger: GAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGAT...TGAGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | TCTCAACGTGCAAAGGGCTGTTCTCCCCATTTCACAGATAGAAGCATGAAGGGCCGACTGACAGTAGTCTaGAGGGCTTCCCCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQRAKGCSPHFTDRSMKGRLTVV*RASPRA Trigger: TGCTCTGGGGGAAGCCCTGCAGACTACTGTCAGTCG...GCCCTTCATGCTTCTATCTGTGAAATGGGGAGAACAGCCCTTTGCACGTTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | CCCACTGCTACAGGGCATCCTGAGGACTCATCTGCAAAAGGCCAGTTCTTCCCATCCATCCTCTCCCCATaGCGACATACAAAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTATGHPEDSSAKGQFFPSILSP*RHTKRH Trigger: ATGCCTCTTTGTATGTCGGCATGGGGAGAGGATGGA...TGGGAAGAACTGGCCTTTTGCAGATGAGTCCTCAGGATGCCCTGTAGCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | AATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGAGGGGCTGCATGGGCTaGCAGATGATAGTGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NDSELSALNAAWAFPLLQRGCMG*QMIVRG Trigger: ACCCCTCACTATCATCTGCCAGCCCATGCAGCCCCT...CTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR TCA 90 bp | TTGGATTCCAGACACAGTCCTTCCTCTTGCATGCCTCTCCGGGAGGGAGCAGCTTACACCCAAACACAGTaGTTGGAGCATCTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LDSRHSPSSCMPLREGAAYTQTQ*LEHLSR Trigger: ACGAGAAAGATGCTCCAATCACTGTGTTTGGGTGTA...AGCTGCTCCCTCCCGGAGAGGCATGCAAGAGGAAGGACTGTGTCTGGAATCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | GTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACAAATCGCCAATTTGCTaGCTGGAATGTGAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCFECSVGFPTATGHPEDKSPIC*LECEVC Trigger: ACAGACCTCACATTCCAGTCAGCAAATTGGCGATTT...GTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | AATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGTCTTCCTCCCGTGGATaGCAGAGCTTTTTGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NDSELSALNAAWAFPLLQSSSRG*QSFLCA Trigger: CGCGCACAAAAAGCTCTGGCATCCACGGGAGGAAGA...CTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAACGACTGACAGTAGTCTaGAGGGCTTCCCCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPSESRLSLTISPSPKHERLTVV*RASPRA Trigger: TGCTCTGGGGGAAGCCCTGCAGACTACTGTCAGTCG...TTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCACTTCTGTTTTGGATaGAGCCTCTGCAGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SALNAAWAFPLLQGILRTHFCFG*SLCSKV Trigger: GACTTTGCTGCAGAGGCTGCATCCAAAACAGAAGTG...AGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCATTGGCATCAAAGCATTaGGACAGCCAGTACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFECSVGFPTATGHPEDSLASKH*DSQYFP Trigger: TGGGAAGTACTGGCTGTCCCAATGCTTTGATGCCAA...TGAGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCACGCCAATTTGCTGACTaGAATGTGAGGTCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFECSVGFPTATGHPEDSRQFAD*NVRSVG Trigger: ACCTACAGACCTCACATTCCAGTCAGCAAATTGGCG...TGAGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGGCAGTGGGGCTaGGAACTTACATTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LNDSELSALNAAWAFPLLQGQWG*ELTFPS Trigger: CGATGGAAATGTAAGTTCTCAGCCCCACTGCCCCTG...TAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | AATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGTCCATGCCGGTAATGTaGTCCCAGCAACCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NDSELSALNAAWAFPLLQSMPVM*SQQPTL Trigger: CAAAGTGGGTTGCTGGGAGCACATTACCGGCATGGA...CTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTATCCCGCAGATCTGCTTaGACTGCTGCCAGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNDSELSALNAAWAFPLLSRRSA*TAARSQ Trigger: CTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGA...TAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTGCATGAATCTCAACCCGAGAGAATATGGTaGCCACCCAGTCGCATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSAIRWPRNEPFRLHESQPERIW*PPSRIL Trigger: TAGGATGCGACTGGGTGGCCACCATATTCTCTCGGG...TTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTCACAAACGCGAGTGAGCTaGATGATACGGTATTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CFECSVGFPTATGHPEDSQTRVS*MIRYLG Trigger: TCCTAAATACCGTATCATCCAGCTCACTCGCGTTTG...TGAGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGTCTCACGCGTGAGAAAGAGACTAACATGCCTTCCTAACACAGCTGGTCAGGGGCAGTGGGGCTaGGAACTTACATTTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TKVSRVRKRLTCLPNTAGQGQWG*ELTFPS Trigger: CGATGGAAATGTAAGTTCTCAGCCCCACTGCCCCTG...ACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCACGCGTGAGACTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | CTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTAGCATGTTCAGGTTGGTaGGTATGTAGCGGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNDSELSALNAAWAFPLLACSGW*VCSGLW Trigger: CCAAAGGCCGCTACATACGCACCAACCTGAACATGC...TAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTATCGCACATGAAGAACTaGCAGAGAGTGATGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNDSELSALNAAWAFPLLSHMKN*QRVMWG Trigger: CCCCCACATCACTCTCTGCCAGTTCTTCATGTGCGA...TAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | CTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTAAAATCCAGCCCTCACTaGTGCTGGTCTGTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LNDSELSALNAAWAFPLLKSSPH*CWSVPW Trigger: CCATGGAACAGACCAGCACCAGTGAGGGCTGGATTT...TAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAATCCAGCCCTCACTaGTGCTGGTCTGTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSESRLSLTISPSPKHEKSSPH*CWSVPW Trigger: CCATGGAACAGACCAGCACCAGTGAGGGCTGGATTT...TTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATAGGGGCTGCATGGGCTaGCAGATGATAGTGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QESHYPTLCRFGTVDCADRGCMG*QMIVRG Trigger: ACCCCTCACTATCATCTGCCAGCCCATGCAGCCCCT...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | AATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCAAAGAGGCATCGCTTCTaGGGTCCAGGCTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDSELSALNAAWAFPKRHRF*GPGWLL Trigger: CAACAGCCAGCCTGGACCCCAGAAGCGATGCCTCTT...TGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTGCATGAATCTCAAGAGGCATGTTCAGGTTaGTGCGTATGTAGCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAIRWPRNEPFRLHESQEACSG*CVCSGL Trigger: AAGGCCGCTACATACGCACCAACCTGAACATGCCTC...TTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTGCATGAATCTCAAAGTCGCATCCTAGCTTaGCGTCAATGTTCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAIRWPRNEPFRLHESQSRILA*RQCSGQ Trigger: TTGCCCAGAACATTGACGTCAAGCTAGGATGCGACT...TTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | CTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGTCCAGGCTGGCTGTTaGCTCTCAGGGGCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQSHRPLSMKRNMLNDSVQAGC*LSGAAW Trigger: CCATGCAGCCCCTGAGAGTCAACAGCCAGCCTGGAC...AGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGTCCATCCTCTCCCCATaGCGACATACAAAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPLNHDFLSQSHRPLSMSILSP*RHTKRH Trigger: ATGCCTCTTTGTATGTCGGCATGGGGAGAGGATGGA...CATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGTCTCACGCGTGAGAAAGAGACTAACATGCCTTCCTAACACAGCTGGTGCATGTTCAGGTTGGTaGGTATGTAGCGGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKVSRVRKRLTCLPNTAGACSGW*VCSGLW Trigger: CCAAAGGCCGCTACATACGCACCAACCTGAACATGC...ACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCACGCGTGAGACTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATCAAGCTTCTCTAGGGTaGGTAGGTGGCTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QESHYPTLCRFGTVDCADQASLG*VGGWLG Trigger: TCCAAGCCAGCCACCTACCCACCCTAGAGAAGCTTG...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | TCTCAACGTGCAAAGGGCTGTTCTCCCCATTTCACAGATAGAAGCATGAAGGGCTTGACGTCAATGTTCTaGGCAAGCTTCTCTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQRAKGCSPHFTDRSMKGLTSMF*ASFSRV Trigger: CACCCTAGAGAAGCTTGCCCAGAACATTGACGTCAA...GCCCTTCATGCTTCTATCTGTGAAATGGGGAGAACAGCCCTTTGCACGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | AATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGTTGACGTCAATGTTCTaGGCAAGCTTCTCTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NDSELSALNAAWAFPLLQLTSMF*ASFSRV Trigger: CACCCTAGAGAAGCTTGCCCAGAACATTGACGTCAA...CTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| 3UTR CAA 72 bp | ACATCCGTGTTCCTTCTCAGTGGCCAGGGTTTCAATTaGCACACACACGCTACACAACGAACTATCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSVFLLSGQGFN*HTHATQRTISN Trigger: GTTCGAGATAGTTCGTTGTGTAGCGTGTGTGTGCAAATTGAAACCCTGGCCACTGAGAAGGAACACGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CAA 72 bp | AAGGGCAGCCTCAGTGTGTGTATTAACACGCACCAATaGTTCCAGTCAGACACCCAGAAATCACAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSLSVCINTHQ*FQSDTQKSQGQ Trigger: TTGTCCCTGTGATTTCTGGGTGTCTGACTGGAACAATTGGTGCGTGTTAATACACACACTGAGGCTGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATTTCTTCCCGCAGATCTaGTTGGACTGCTGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QESHYPTLCRFGTVDCADFFPQI*LDCCQK Trigger: CTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAA...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | CTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACCCACTAGTCTTGCTTaGATACACCCAAACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNDSELSALNAAWAFPLLPTSLA*IHPNTV Trigger: CACTGTGTTTGGGTGTATGCAAGCAAGACTAGTGGG...TAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | AATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACGCTTCGAGGGAAGATaGGTGGGCCACAATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDSELSALNAAWAFPRFEGR*VGHNQN Trigger: ATTCTGATTGTGGCCCACGCATCTTCCCTCGAAGCG...TGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGTCTCACGCGTGAGAAAGAGACTAACATGCCTTCCTAACACAGCTGGTAAGGGGTCACCCACATaGGAGAACAACCAGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TKVSRVRKRLTCLPNTAGKGSPT*ENNQSH Trigger: ATGTGACTGGTTGTTCTCCCATGTGGGTGACCCCTT...ACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCACGCGTGAGACTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | CTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGGGTGGGTAGGTGGCTaGCTTGGAAGTGGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQSHRPLSMKRNMLNDSGWVGG*LGSGRP Trigger: TGGCCTACCACTTCCAAGCCAGCCACCTACCCACCC...AGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAATCGAGGGAAGATGCGTaGGCCACAATCAGAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FPSESRLSLTISPSPKHESREDA*ATIRML Trigger: TAACATTCTGATTGTGGCCCACGCATCTTCCCTCGA...TTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATAGAACTGGCAGAGAGTaGTGTGGGGGAAGATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QESHYPTLCRFGTVDCADRTGRE*CGGRCC Trigger: ACAACATCTTCCCCCACATCACTCTCTGCCAGTTCT...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAATACACCCAAACACAGTaGTTGGAGCATCTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSESRLSLTISPSPKHEYTQTQ*LEHLSR Trigger: ACGAGAAAGATGCTCCAATCACTGTGTTTGGGTGTA...TTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAATCGCCAATTTGCTaGCTGGAATGTGAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPLNHDFLSQSHRPLSMKSPIC*LECEVC Trigger: ACAGACCTCACATTCCAGTCAGCAAATTGGCGATTT...CATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | AATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCAGAACAACCAGTCACATaGTGCCTGAACGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDSELSALNAAWAFPEQPVT*CLNASS Trigger: GGAAGAAGCGTTCAGGCAGCATGTGACTGGTTGTTC...TGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | CCTGTGAAACTTAGTGGGAGGCTCATCTGTATTCTAACACACACATATACTGAGTTTGGATGCAGCCTCTaGAGCAAAGTCAGCCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVKLSGRLICILTHTYTEFGCSL*SKVSRE Trigger: TTCGCGGCTGACTTTGCTGCAGAGGCTGCATCCAAA...CTCAGTATATGTGTGTGTTAGAATACAGATGAGCCTCCCACTAAGTTTCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGTCTCACGCGTGAGAAAGAGACTAACATGCCTTCCTAACACAGCTGGTCCCACTAGTCTTGCTTaGATACACCCAAACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKVSRVRKRLTCLPNTAGPTSLA*IHPNTV Trigger: CACTGTGTTTGGGTGTATGCAAGCAAGACTAGTGGG...ACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCACGCGTGAGACTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTGCATGAATCTCAATATCAACACTCAGGTTaGCTGCAGCTAACTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSAIRWPRNEPFRLHESQYQHSG*LQLTLM Trigger: CATCAGAGTTAGCTGCAGCCAACCTGAGTGTTGATA...TTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CAA 72 bp | GTTATCCACTTAAGTTCTTCAGAAAGTTACTTCAGATaGTGCCCTCCCTGGCTCTGTAGACAGTTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIHLSSSESYFR*CPPWLCRQLPR Trigger: CCTGGGCAACTGTCTACAGAGCCAGGGAGGGCACAATCTGAAGTAACTTTCTGAAGAACTTAAGTGGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CAA 72 bp | GAAACCCAGCGCCTAGGTAACAGGGGAATTCTGTTCTaGGAGCACAGAAACGAAGTTTTCTACAAAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETQRLGNRGILF*EHRNEVFYKGS Trigger: ACTGCCTTTGTAGAAAACTTCGTTTCTGTGCTCCAAGAACAGAATTCCCCTGTTACCTAGGCGCTGGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR TCA 90 bp | ATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGTCTCCCCAAGTCCTTaGTCTTCATACTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MKRNMLNDSELSALNAAWVSPSP*SSYCRL Trigger: GAGGCGGCAGTATGAAGATCAAGGACTTGGGGAGAC...CCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | CGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAACAGATCTGCTTGGACTaGTGCCAGAAGTCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTISPSPKHEKKYAKQICLD*CQKSES Trigger: GCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTG...TTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | CGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAACGCTTCGAGGGAAGATaGGTGGGCCACAATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTISPSPKHEKKYAKRFEGR*VGHNQN Trigger: ATTCTGATTGTGGCCCACGCATCTTCCCTCGAAGCG...TTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTTGGGGGAAGATGTTGTaGGCCTTGTTCTTCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQSHRPLSMKRNMLNDSWGKML*ALFFPQ Trigger: CTGCGGGAAGAACAAGGCCCACAACATCTTCCCCCA...AGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | GACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATTGGCAGAGAGTGATGTaGGGGAAGATGTTGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DFLSQSHRPLSMKRNMLNWQRVM*GKMLWA Trigger: GGCCCACAACATCTTCCCCCACATCACTCTCTGCCA...ATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAACCCAAACACAGTGATTaGAGCATCTTTCTCGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: FPSESRLSLTISPSPKHEPKHSD*SIFLVI Trigger: GATTACGAGAAAGATGCTCCAATCACTGTGTTTGGG...TTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTGTATTAACACGCACCAATTGTTCCAGTCAGACACCCAGAAATCACAGTCGAGGGAAGATGCGTaGGCCACAATCAGAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVCINTHQLFQSDTQKSQSREDA*ATIRML Trigger: TAACATTCTGATTGTGGCCCACGCATCTTCCCTCGA...CTGTGATTTCTGGGTGTCTGACTGGAACAATTGGTGCGTGTTAATACACACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| 3UTR CAA 72 bp | AGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTaGACTGTGCCGATGCCTGTGAAACTTAGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLIIQLCADLVQ*TVPMPVKLSGR Trigger: CCTCCCACTAAGTTTCACAGGCATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGTCCATGCCGGTAATGTaGTCCCAGCAACCCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MKRNMLNDSELSALNAAWSMPVM*SQQPTL Trigger: CAAAGTGGGTTGCTGGGAGCACATTACCGGCATGGA...CCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATCAAGCTTCTCTAGGGTaGGTAGGTGGCTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLSQSHRPLSMKRNMLNDQASLG*VGGWLG Trigger: TCCAAGCCAGCCACCTACCCACCCTAGAGAAGCTTG...ATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATCCCGAGAGAATATGGTaGCCACCCAGTCGCATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLSQSHRPLSMKRNMLNDPERIW*PPSRIL Trigger: TAGGATGCGACTGGGTGGCCACCATATTCTCTCGGG...ATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTGAAACTTAGTGGGAGGCTCATCTGTATTCTAACACACACATATACTGAGCGCCAATTTGCTGACTaGAATGTGAGGTCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVKLSGRLICILTHTYTERQFAD*NVRSVG Trigger: ACCTACAGACCTCACATTCCAGTCAGCAAATTGGCG...CTCAGTATATGTGTGTGTTAGAATACAGATGAGCCTCCCACTAAGTTTCACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| 3UTR CAA 72 bp | ATCTCCAGGAGTCTCATTATCCAACTTTGTGCAGATTaGGTACAGTTGACTGTGCCGATGCCTGTGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ISRSLIIQLCAD*VQLTVPMPVKL Trigger: AAGTTTCACAGGCATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTGGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR TCA 90 bp | GACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATAGTCGCATCCTAGCTTaGCGTCAATGTTCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DFLSQSHRPLSMKRNMLNSRILA*RQCSGQ Trigger: TTGCCCAGAACATTGACGTCAAGCTAGGATGCGACT...ATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS-3UTR TCA 90 bp | ACGTGCATGTGCCGGATTAGACAATTTAAATGCAAATCTCCAGGAGTCTCATTAACTCATCAGCCTTGGTaGTGTAGTTCTCAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TCMCRIRQFKCKSPGVSLTHQPW*CSSQEA Trigger: TGCTTCCTGAGAACTACATCACCAAGGCTGATGAGT...TAATGAGACTCCTGGAGATTTGCATTTAAATTGTCTAATCCGGCACATGCACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR TCA 90 bp | TATATTGGATTAAGGACAATGGAATACAGCCCAATCAAAGTGATGCATTTACCTGTCTCCCCAAGTCCTTaGTCTTCATACTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YIGLRTMEYSPIKVMHLPVSPSP*SSYCRL Trigger: GAGGCGGCAGTATGAAGATCAAGGACTTGGGGAGAC...AGGTAAATGCATCACTTTGATTGGGCTGTATTCCATTGTCCTTAATCCAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CCA 90 bp | CACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTCAAACGCGAGTGAGCTaGATGATACGGTATTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRPLSMKRNMLNDSELSAQTRVS*MIRYLG Trigger: TCCTAAATACCGTATCATCCAGCTCACTCGCGTTTG...AGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS-3UTR CCA 90 bp | CACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTATCAACACTCAGGTTaGCTGCAGCTAACTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HRPLSMKRNMLNDSELSAYQHSG*LQLTLM Trigger: CATCAGAGTTAGCTGCAGCCAACCTGAGTGTTGATA...AGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| 3UTR CAA 72 bp | TTAAATGCAAATCTCCAGGAGTCTCATTATCCAACTTaGTGCAGATTTGGTACAGTTGACTGTGCCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNANLQESHYPT*CRFGTVDCADA Trigger: GGCATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTGGAGATTTGCATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR GCA 90 bp | TTTAACCTACACACAGCAAACCTAATACTATATGTATGTAACAGCCCAGCTATTGGCGGGTCTGTCAGTTaGCATATTCCAGTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNLHTANLILYVCNSPAIGGSVS*HIPVSP Trigger: GGGAGAAACTGGAATATGGCAACTGACAGACCCGCC...AATAGCTGGGCTGTTACATACATATAGTATTAGGTTTGCTGTGTGTAGGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR CCA 90 bp | TTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATCGTGCACTTCTGTTTTaGATGCAGCCTCTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLSQSHRPLSMKRNMLNDRALLF*MQPLQQ Trigger: TTGCTGCAGAGGCTGCATCCAAAACAGAAGTGCACG...ATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CCA 90 bp | GCAAATCTCCAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACCCCAAACACAGTGATTaGAGCATCTTTCTCGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ANLQESHYPTLCRFGTVDPKHSD*SIFLVI Trigger: GATTACGAGAAAGATGCTCCAATCACTGTGTTTGGG...GTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTGGAGATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR CCA 90 bp | CCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATTTGGCATCAAAGCATTaGGACAGCCAGTACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSMKRNMLNDSELSALNLASKH*DSQYFP Trigger: TGGGAAGTACTGGCTGTCCCAATGCTTTGATGCCAA...ATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCATGCTTAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS-3UTR GCA 90 bp | AGTGGCAACCAAAGAACCAGTATACATTGTTTCCGTTTAAAACATGTATCACATCACTTCTGTTTTGGATaGAGCCTCTGCAGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNQRTSIHCFRLKHVSHHFCFG*SLCSKV Trigger: GACTTTGCTGCAGAGGCTGCATCCAAAACAGAAGTG...ATGTGATACATGTTTTAAACGGAAACAATGTATACTGGTTCTTTGGTTGCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR TCA 90 bp | CGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAAACTCGAATCTTCAAGTaGTTGTCTTGTTGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLTISPSPKHEKKYAKTRIFK*LSCCKP Trigger: AGGTTTACAACAAGACAATCACTTGAAGATTCGAGT...TTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATTTTCAAAATATTATGTaGAGTCTGAACGCAGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFLSQSHRPLSMKRNMLNFQNIM*SLNAAE Trigger: CTCCGCTGCGTTCAGACTGCACATAATATTTTGAAA...ATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS-3UTR TCA 90 bp | ATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGACTCGAATCTTCAAGTaGTTGTCTTGTTGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: MKRNMLNDSELSALNAAWTRIFK*LSCCKP Trigger: AGGTTTACAACAAGACAATCACTTGAAGATTCGAGT...CCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTTTCAAAATATTATGTaGAGTCTGAACGCAGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSQSHRPLSMKRNMLNDFQNIM*SLNAAE Trigger: CTCCGCTGCGTTCAGACTGCACATAATATTTTGAAA...ATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 90 bp | GCGCGGGGAAAGCCCATGGACAGGAGCACGTCCAGCGCCGACCCATaGTTGACTGTGCCCGGGCGCTGCAGGCGGTCCCTGCGCGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARGKPMDRSTSSADP*LTVPGRCRRSLRGV Trigger: CACCCCGCGCAGGGACCGCCTGCAGCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGACGTGCTCCTGTCCATGGGCTTTCCCCGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000136530.8 |
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| CDS GCA 90 bp | AGGAGCACGTCCAGCGCCGACCCATGCTTGACTGTGCCCGGGCGCTaGAGGCGGTCCCTGCGCGGGGTGACTTTGCTGTACAGCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSTSSADPCLTVPGR*RRSLRGVTLLYSSS Trigger: CGAGGAGCTGTACAGCAAAGTCACCCCGCGCAGGGACCGCCTGCAGCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGACGTGCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000136530.8 |
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| CDS CCA 90 bp | TCGGTTCACAAGATGCCTCAGAGAAGAACAGTGTCTCCCGGGCTGTaGCGCGGGCGCGGGGAAAGCCCATGGACAGGAGCACGTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SVHKMPQRRTVSPGL*RGRGESPWTGARPA Trigger: CGCTGGACGTGCTCCTGTCCATGGGCTTTCCCCGCGCCCGCGCCACAGCCCGGGAGACACTGTTCTTCTCTGAGGCATCTTGTGAACCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136530.8 |
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| CDS CCA 90 bp | GGGAGAACAACCAGTCACATGCTGCCTGAACGCTTCTTCCTCCCGTaGATGCCAGAGCTTTTTGTGCGCGGGCGCGGGGAAAGCCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTTSHMLPERFFLP*MPELFVRGRGESPW Trigger: CCATGGGCTTTCCCCGCGCCCGCGCACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGTTGTTCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS GCA 90 bp | GAACAACCAGTCACATGCTGCCTGAACGCTTCTTCCTCCCGTGGATaGCAGAGCTTTTTGTGCGCGGGCGCGGGGAAAGCCCATGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: EQPVTCCLNASSSRG*QSFLCAGAGKAHGQ Trigger: CTGTCCATGGGCTTTCCCCGCGCCCGCGCACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGTTGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR CAA 90 bp | TTGGATTCCAGACACAGTCCTTCCTCTTGCATGCCTCTCCGGGAGGGAGCAGCTGGATGCCAGAGCTTTTaGTGCGCGGGCGCGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDSRHSPSSCMPLREGAAGCQSF*CAGAGK Trigger: TTTCCCCGCGCCCGCGCACAAAAAGCTCTGGCATCC...AGCTGCTCCCTCCCGGAGAGGCATGCAAGAGGAAGGACTGTGTCTGGAATCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR CAA 90 bp | CCCACTGCTACAGGGCATCCTGAGGACTCATCTGCAAAAGGCCAGTTCTTCCCAAGGGTCTCTCTCCAGTaGAAGCCCCCAGTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTATGHPEDSSAKGQFFPRVSLQ*KPPVGP Trigger: TGGCCCCACTGGGGGCTTCAACTGGAGAGAGACCCT...TGGGAAGAACTGGCCTTTTGCAGATGAGTCCTCAGGATGCCCTGTAGCAGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 90 bp | AAGATGTTGTGGGCCTTGTTCTTCCCGCAGATCTGCTTGGACTGCTaGCAGAAGTCAGAGAGCTTCTGGGCTAATGGCCCTGTCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KMLWALFFPQICLDC*QKSESFWANGPVGR Trigger: CCGCCCGACAGGGCCATTAGCCCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS GCA 90 bp | GGGAAGATGTTGTGGGCCTTGTTCTTCCCGCAGATCTGCTTGGACTaGTGCCAGAAGTCAGAGAGCTTCTGGGCTAATGGCCCTGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKMLWALFFPQICLD*CQKSESFWANGPVG Trigger: CCCGACAGGGCCATTAGCCCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS GCA 90 bp | TGTAGTTCTCAGGAAGCAGCCCAGAGCAGCCAGTGGTCAGCGAGGTaGCATAAATCCAGCCCTCACTGGTGCTGGTCTGTTCCATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSQEAAQSSQWSAR*HKSSPHWCWSVPWE Trigger: CTCCCATGGAACAGACCAGCACCAGTGAGGGCTGGATTTATGGCACCTCGCTGACCACTGGCTGCTCTGGGCTGCTTCCTGAGAACTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 90 bp | GGCAGTGGGGCTGAGAACTTACATTTCCATCGACTGACAGTAGTCTaGAGGGCTTCCCCCAGAGCATCCACCTTGCTGTCCTCGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: GSGAENLHFHRLTVV*RASPRASTLLSSHM Trigger: CATGTGCGAGGACAGCAAGGTGGATGCTCTGGGGGAAGCCCTGCAGACTACTGTCAGTCGATGGAAATGTAAGTTCTCAGCCCCACTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS GCA 90 bp | TGGGACAGCCAGTACTTCCCAAATACAACGTCCATCCTCTCCCCATaGCGACATACAAAGAGGCATCGCTTCTGGGGTCCAGGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WDSQYFPNTTSILSP*RHTKRHRFWGPGWL Trigger: CAGCCAGCCTGGACCCCAGAAGCGATGCCTCTTTGTATGTCGGCATGGGGAGAGGATGGACGTTGTATTTGGGAAGTACTGGCTGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 90 bp | CTGCCTGAACGCTTCTTCCTCCCGTGGATGCCAGAGCTTTTTGTCTaGCAGGAGAATTCAGCAGACTCCAGGCTCTCAGCTTCCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPERFFLPWMPELFV*QENSADSRLSASPD Trigger: GTCTGGGGAAGCTGAGAGCCTGGAGTCTGCTGAATTCTCCTGGCAGACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136530.8 |
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| CDS TCA 90 bp | GGATATCCCGAGAGAATATGGTGGCCACCCAGTCGCATCCTAGCTTaGCGTCAATGTTCTGGGCAAGCTTCTCTAGGGTGGGTAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GYPERIWWPPSRILA*RQCSGQASLGWVGG Trigger: GCCACCTACCCACCCTAGAGAAGCTTGCCCAGAACATTGACGTCAAGCTAGGATGCGACTGGGTGGCCACCATATTCTCTCGGGATATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS TCA 90 bp | ATGGGCTGGCAGATGATAGTGAGGGGTGTTGTCTCCCCAAGTCCTTaGTCTTCATACTGCCGCCTCTCTAACGCTCCATCGCCAAACGCG | + |
|
Preference number: 5 (lower is better) Translates to: MGWQMIVRGVVSPSP*SSYCRLSNAPSPNA Trigger: CGCGTTTGGCGATGGAGCGTTAGAGAGGCGGCAGTATGAAGATCAAGGACTTGGGGAGACAACACCCCTCACTATCATCTGCCAGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 90 bp | GTGATGTGGGGGAAGATGTTGTGGGCCTTGTTCTTCCCGCAGATCTaGTTGGACTGCTGCCAGAAGTCAGAGAGCTTCTGGGCTAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VMWGKMLWALFFPQI*LDCCQKSESFWANG Trigger: GCCATTAGCCCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTTCCCCCACATCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS GCA 90 bp | CCAGTGGGGCCATGGGTAAGGGGAAGGATGGGCGGGTCTGTCAGTTaGCATATTCCAGTTTCTCCCAATTCTTCGCAGGAACAGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVGPWVRGRMGGSVS*HIPVSPNSSQEQKP Trigger: AGGCTTCTGTTCCTGCGAAGAATTGGGAGAAACTGGAATATGGCAACTGACAGACCCGCCCATCCTTCCCCTTACCCATGGCCCCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS CCA 90 bp | AATATGGTGGCCACCCAGTCGCATCCTAGCTTGACGTCAATGTTCTaGGCAAGCTTCTCTAGGGTGGGTAGGTGGCTGGCTTGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NMVATQSHPSLTSMF*ASFSRVGRWLAWKW Trigger: CCACTTCCAAGCCAGCCACCTACCCACCCTAGAGAAGCTTGCCCAGAACATTGACGTCAAGCTAGGATGCGACTGGGTGGCCACCATATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS-3UTR CAA 90 bp | TTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAACTGCGCGGGGTGACTTaGCTGTACAGCTCCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FPSESRLSLTISPSPKHELRGVT*LYSSSR Trigger: GCGCGAGGAGCTGTACAGCAAAGTCACCCCGCGCAG...TTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR CAA 90 bp | CCCACTGCTACAGGGCATCCTGAGGACTCATCTGCAAAAGGCCAGTTCTTCCCATTCCCGCAGATCTGCTaGGACTGCTGCCAGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PTATGHPEDSSAKGQFFPFPQIC*DCCQKS Trigger: TGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAA...TGGGAAGAACTGGCCTTTTGCAGATGAGTCCTCAGGATGCCCTGTAGCAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS-3UTR CAA 90 bp | TTCAGATTGTGCCCTCCCTGGCTCTGTAGACAGTTGCCCAGGACGCTGTCTATACCCAGAGCATCCACCTaGCTGTCCTCGCACATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FRLCPPWLCRQLPRTLSIPRAST*LSSHMK Trigger: CTTCATGTGCGAGGACAGCAAGGTGGATGCTCTGGG...TATAGACAGCGTCCTGGGCAACTGTCTACAGAGCCAGGGAGGGCACAATCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS TCA 90 bp | AGTAGGAACCATGGAAGATCCAGGTGCTACACTCATCAGCCTTGGTaGTGTAGTTCTCAGGAAGCAGCCCAGAGCAGCCAGTGGTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRNHGRSRCYTHQPW*CSSQEAAQSSQWSA Trigger: CGCTGACCACTGGCTGCTCTGGGCTGCTTCCTGAGAACTACATCACCAAGGCTGATGAGTGTAGCACCTGGATCTTCCATGGTTCCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 90 bp | GAACAACCAGTCACATGCTGCCTGAACGCTTCTTCCTCCCGTGGATaGCAGAGCTTTTTGTCTGCCAGGAGAATTCAGCAGACTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EQPVTCCLNASSSRG*QSFLSARRIQQTPG Trigger: GCCTGGAGTCTGCTGAATTCTCCTGGCAGACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGTTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136530.8 |
||
| CDS CCA 90 bp | TCGCACATGAAGAACTGGCAGAGAGTGATGTGGGGGAAGATGTTGTaGGCCTTGTTCTTCCCGCAGATCTGCTTGGACTGCTGCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHMKNWQRVMWGKML*ALFFPQICLDCCQK Trigger: CTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTTCCCCCACATCACTCTCTGCCAGTTCTTCATGTGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS CCA 90 bp | TCCACCTTGCTGTCCTCGCACATGAAGAACTGGCAGAGAGTGATGTaGGGGAAGATGTTGTGGGCCTTGTTCTTCCCGCAGATCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: STLLSSHMKNWQRVM*GKMLWALFFPQICL Trigger: CAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTTCCCCCACATCACTCTCTGCCAGTTCTTCATGTGCGAGGACAGCAAGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS CCA 90 bp | GGGAGAACAACCAGTCACATGCTGCCTGAACGCTTCTTCCTCCCGTaGATGCCAGAGCTTTTTGTCTGCCAGGAGAATTCAGCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRTTSHMLPERFFLP*MPELFVCQENSADS Trigger: GGAGTCTGCTGAATTCTCCTGGCAGACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGTTGTTCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136530.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGGGCATCCTGAGGACTACGTGCACTTCTGTTTaGGATGCAGCCTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SALNAAWAFPLLQGILRTTCTSV*DAASAA Trigger: TGCTGCAGAGGCTGCATCCAAAACAGAAGTGCACGT...AGTCCTCAGGATGCCCTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS TCA 90 bp | GAAAGTCCGAAGGCTACTTCCAGGTCTGAGGGCCGAGTGTGCTCCTaGCGAATGAAAGCAGCTTTTGAACCTCTGGGAGTGACTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESPKATSRSEGRVCS*RMKAAFEPLGVTVA Trigger: AGCTACAGTCACTCCCAGAGGTTCAAAAGCTGCTTTCATTCGTCAGGAGCACACTCGGCCCTCAGACCTGGAAGTAGCCTTCGGACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129906.2 |
||
| CDS GCA 90 bp | GGTTGGCTGCAGCTAACTCTGATGGAGGTATCCATGCCGGTAATGTaGTCCCAGCAACCCACTTTGTCCATTCAAATAAGCCCGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWLQLTLMEVSMPVM*SQQPTLSIQISPAP Trigger: TGGAGCCGGGCTTATTTGAATGGACAAAGTGGGTTGCTGGGAGCACATTACCGGCATGGATACCTCCATCAGAGTTAGCTGCAGCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS TCA 90 bp | ATTTGTACGAAGTCCTTTGAGTTCTGCGGGGATAGACCTTGGAGCTaGCAGGTACACGCTTCGAGGGAAGATGCGTGGGCCACAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICTKSFEFCGDRPWS*QVHASREDAWATIR Trigger: TCTGATTGTGGCCCACGCATCTTCCCTCGAAGCGTGTACCTGTCAGCTCCAAGGTCTATCCCCGCAGAACTCAAAGGACTTCGTACAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS TCA 90 bp | ACAAGGCTTCACCCACTAGTCTTGCTTGCATACACCCAAACACAGTaGTTGGAGCATCTTTCTCGTAATCCCGGAAACCGCCGCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TRLHPLVLLAYTQTQ*LEHLSRNPGNRRSS Trigger: AGAGGAGCGGCGGTTTCCGGGATTACGAGAAAGATGCTCCAATCACTGTGTTTGGGTGTATGCAAGCAAGACTAGTGGGTGAAGCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS CCA 90 bp | CTCCATCGCCAAACGCGAGTGAGCTGGATGATACGGTATTTAGGATaGAGTAGGAACCATGGAAGATCCAGGTGCTACACTCATCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHRQTRVSWMIRYLG*SRNHGRSRCYTHQP Trigger: AGGCTGATGAGTGTAGCACCTGGATCTTCCATGGTTCCTACTCCATCCTAAATACCGTATCATCCAGCTCACTCGCGTTTGGCGATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | AATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTACAGAAGATGTTGTGGGCCTaGTTCTTCCCGCAGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NDSELSALNAAWAFPLLQKMLWA*FFPQIC Trigger: GCAGATCTGCGGGAAGAACAAGGCCCACAACATCTT...CTGTAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTCTGAATCACGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAGGGCGGGTCTGTCAGTaGCCATATTCCAGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPSESRLSLTISPSPKHEGRVCQ*PYSSFS Trigger: GGAGAAACTGGAATATGGCAACTGACAGACCCGCCC...TTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCGTGATTCAGAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | CTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCACTGCTAACGTGCACTTCTGTTTaGGATGCAGCCTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LNDSELSALNAAWAFPLLTCTSV*DAASAA Trigger: TGCTGCAGAGGCTGCATCCAAAACAGAAGTGCACGT...TAGCAGTGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | CGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAAAGGGTCTCTCTCCAGTaGAAGCCCCCAGTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLSLTISPSPKHEKKYAKRVSLQ*KPPVGP Trigger: TGGCCCCACTGGGGGCTTCAACTGGAGAGAGACCCT...TTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS CCA 90 bp | TTGTTCTTTCAGAAGTCTGTTCTGTCTTTCCCCCTCTCCTTCTCTTaGGCCAGGAGGAAAGGTCAACAATTGCTTCAGAACAGCGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFFQKSVLSFPLSFS*ARRKGQQLLQNSGE Trigger: TTCCCCGCTGTTCTGAAGCAATTGTTGACCTTTCCTCCTGGCCCAAGAGAAGGAGAGGGGGAAAGACAGAACAGACTTCTGAAAGAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129906.2 |
||
| CDS CCA 90 bp | GGGAGAACAACCAGTCACATGCTGCCTGAACGCTTCTTCCTCCCGTaGATGCCAGAGCTTTTTGTTCTTTCAGAAGTCTGTTCTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRTTSHMLPERFFLP*MPELFVLSEVCSVF Trigger: AAAGACAGAACAGACTTCTGAAAGAACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGTTGTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129906.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATATGTGGGGGAAGATGTaGTGGGCCTTGTTCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QESHYPTLCRFGTVDCADMWGKM*WALFFP Trigger: CGGGAAGAACAAGGCCCACAACATCTTCCCCCACAT...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CAA 90 bp | AATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCAAAGAGCCCGATGAAGTaGGAGGAGGTGTACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NMLNDSELSALNAAWAFPKSPMK*EEVYSS Trigger: GGAGCTGTACACCTCCTCCAACTTCATCGGGCTCTT...TGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGGTCCAGGCTGGCTGTaGACTCTCAGGGGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DFLSQSHRPLSMKRNMLNGPGWL*TLRGCM Trigger: CATGCAGCCCCTGAGAGTCAACAGCCAGCCTGGACC...ATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGCCATCAGATGGCCACGTAATGAGCCATTCAGGCTGCATGAATCTCAATTTGGCATCAAAGCATaGGGACAGCCAGTACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSAIRWPRNEPFRLHESQFGIKA*GQPVLP Trigger: GGGAAGTACTGGCTGTCCCAATGCTTTGATGCCAAA...TTGAGATTCATGCAGCCTGAATGGCTCATTACGTGGCCATCTGATGGCTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CAA 90 bp | CCTGTGAAACTTAGTGGGAGGCTCATCTGTATTCTAACACACACATATACTGAGAAGAGCCCGATGAAGTaGGAGGAGGTGTACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVKLSGRLICILTHTYTEKSPMK*EEVYSS Trigger: GGAGCTGTACACCTCCTCCAACTTCATCGGGCTCTT...CTCAGTATATGTGTGTGTTAGAATACAGATGAGCCTCCCACTAAGTTTCACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CAA 90 bp | TTTAACCTACACACAGCAAACCTAATACTATATGTATGTAACAGCCCAGCTATTGGTCCAGGCTGGCTGTaGACTCTCAGGGGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FNLHTANLILYVCNSPAIGPGWL*TLRGCM Trigger: CATGCAGCCCCTGAGAGTCAACAGCCAGCCTGGACC...AATAGCTGGGCTGTTACATACATATAGTATTAGGTTTGCTGTGTGTAGGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CAA 90 bp | AATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGGCTTTCCCATTTGGCATCAAAGCATaGGGACAGCCAGTACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NMLNDSELSALNAAWAFPFGIKA*GQPVLP Trigger: GGGAAGTACTGGCTGTCCCAATGCTTTGATGCCAAA...TGGGAAAGCCCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGTCTCACGCGTGAGAAAGAGACTAACATGCCTTCCTAACACAGCTGGTTTTGTACGAAGTCCTTaGAGTTCTGCGGGGATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TKVSRVRKRLTCLPNTAGFVRSP*SSAGID Trigger: GTCTATCCCCGCAGAACTCAAAGGACTTCGTACAAA...ACCAGCTGTGTTAGGAAGGCATGTTAGTCTCTTTCTCACGCGTGAGACTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTCTCATTATCCAACTTTGTGCAGATTTGGTACAGTTGACTGTGCCGATTGTGAGGTCTGTAGGTaGTATCAACACTCAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QESHYPTLCRFGTVDCADCEVCR*YQHSGW Trigger: CCAACCTGAGTGTTGATACAACCTACAGACCTCACA...ATCGGCACAGTCAACTGTACCAAATCTGCACAAAGTTGGATAATGAGACTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS-3UTR CAA 90 bp | CTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGGGCGGGTCTGTCAGTaGCCATATTCCAGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQSHRPLSMKRNMLNDSGRVCQ*PYSSFS Trigger: GGAGAAACTGGAATATGGCAACTGACAGACCCGCCC...AGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | CACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTCTTCACCCACTAGTCTaGCTTGCATACACCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: HRPLSMKRNMLNDSELSALHPLV*LAYTQT Trigger: TGTTTGGGTGTATGCAAGCAAGACTAGTGGGTGAAG...AGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | CACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTGTATCAACACTCAGGTaGGCTGCAGCTAACTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HRPLSMKRNMLNDSELSAVSTLR*AAANSD Trigger: ATCAGAGTTAGCTGCAGCCAACCTGAGTGTTGATAC...AGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | CGACTTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAACTTCACCCACTAGTCTaGCTTGCATACACCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RLSLTISPSPKHEKKYAKLHPLV*LAYTQT Trigger: TGTTTGGGTGTATGCAAGCAAGACTAGTGGGTGAAG...TTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAAGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAAAGAAATATGCTAAATGATTCTGAGCTGTCTGCTTTGAATGCAGCGTGGTGTGAGGTCTGTAGGTaGTATCAACACTCAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MKRNMLNDSELSALNAAWCEVCR*YQHSGW Trigger: CCAACCTGAGTGTTGATACAACCTACAGACCTCACA...CCACGCTGCATTCAAAGCAGACAGCTCAGAATCATTTAGCATATTTCTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS-3UTR CAA 90 bp | CTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATTCTTTTGTACGAAGTCCTTaGAGTTCTGCGGGGATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSQSHRPLSMKRNMLNDSFVRSP*SSAGID Trigger: GTCTATCCCCGCAGAACTCAAAGGACTTCGTACAAA...AGAATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCACAATCTCACCGTCCCCTAAGCATGAAAAGAAATATGCTAAATGATGTATCAACACTCAGGTaGGCTGCAGCTAACTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSQSHRPLSMKRNMLNDVSTLR*AAANSD Trigger: ATCAGAGTTAGCTGCAGCCAACCTGAGTGTTGATAC...ATCATTTAGCATATTTCTTTTCATGCTTAGGGGACGGTGAGATTGTGAGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS TCA 72 bp | CCATGGACAGGAGCACGTCCAGCGCCGACCCATGCTTaGCTGTGCCCGGGCGCTGCAGGCGGTCCCTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PWTGARPAPTHA*LCPGAAGGPCA Trigger: CGCGCAGGGACCGCCTGCAGCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGACGTGCTCCTGTCCATGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000136530.8 |
||
| CDS CAA 72 bp | CCCATGGACAGGAGCACGTCCAGCGCCGACCCATGCTaGACTGTGCCCGGGCGCTGCAGGCGGTCCCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PMDRSTSSADPC*TVPGRCRRSLR Trigger: GCGCAGGGACCGCCTGCAGCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGACGTGCTCCTGTCCATGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000136530.8 |
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| CDS CAA 90 bp | CGGGGAAAGCCCATGGACAGGAGCACGTCCAGCGCCGACCCATGCTaGACTGTGCCCGGGCGCTGCAGGCGGTCCCTGCGCGGGGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: RGKPMDRSTSSADPC*TVPGRCRRSLRGVT Trigger: AGTCACCCCGCGCAGGGACCGCCTGCAGCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGACGTGCTCCTGTCCATGGGCTTTCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000136530.8 |
||
| CDS GCA 72 bp | TCCAGCGCCGACCCATGCTTGACTGTGCCCGGGCGCTaGAGGCGGTCCCTGCGCGGGGTGACTTTGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SSADPCLTVPGR*RRSLRGVTLLY Trigger: GTACAGCAAAGTCACCCCGCGCAGGGACCGCCTGCAGCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000136530.8 |
||
| CDS GCA 72 bp | AAGCCCATGGACAGGAGCACGTCCAGCGCCGACCCATaGTTGACTGTGCCCGGGCGCTGCAGGCGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPMDRSTSSADP*LTVPGRCRRSL Trigger: CAGGGACCGCCTGCAGCGCCCGGGCACAGTCAAGCATGGGTCGGCGCTGGACGTGCTCCTGTCCATGGGCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000136530.8 |
||
| CDS GCA 72 bp | GTCACATGCTGCCTGAACGCTTCTTCCTCCCGTGGATaGCAGAGCTTTTTGTGCGCGGGCGCGGGGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VTCCLNASSSRG*QSFLCAGAGKA Trigger: GGCTTTCCCCGCGCCCGCGCACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS CCA 72 bp | ACCAGTCACATGCTGCCTGAACGCTTCTTCCTCCCGTaGATGCCAGAGCTTTTTGTGCGCGGGCGCGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSHMLPERFFLP*MPELFVRGRGE Trigger: TTCCCCGCGCCCGCGCACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS CCA 72 bp | CGACATACAAAGAGGCATCGCTTCTGGGGTCCAGGCTaGCTGTTGACTCTCAGGGGCTGCATGGGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHTKRHRFWGPG*LLTLRGCMGWQ Trigger: CTGCCAGCCCATGCAGCCCCTGAGAGTCAACAGCCAGCCTGGACCCCAGAAGCGATGCCTCTTTGTATGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS GCA 72 bp | CCAGGCTCTCAGCTTCCCCAGACTCGGTTCACAAGATaGCTCAGAGAAGAACAGTGTCTCCCGGGCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGSQLPQTRFTR*LREEQCLPGCG Trigger: GCCACAGCCCGGGAGACACTGTTCTTCTCTGAGGCATCTTGTGAACCGAGTCTGGGGAAGCTGAGAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136530.8 |
||
| CDS CCA 72 bp | TGTTCTGGGCAAGCTTCTCTAGGGTGGGTAGGTGGCTaGCTTGGAAGTGGTAGGCCAGCGTCACATGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSGQASLGWVGG*LGSGRPASHAA Trigger: AGCTGCATGTGACGCTGGCCTACCACTTCCAAGCCAGCCACCTACCCACCCTAGAGAAGCTTGCCCAGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS TCA 72 bp | AAGTCCTTTGAGTTCTGCGGGGATAGACCTTGGAGCTaGCAGGTACACGCTTCGAGGGAAGATGCGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KSFEFCGDRPWS*QVHASREDAWA Trigger: GGCCCACGCATCTTCCCTCGAAGCGTGTACCTGTCAGCTCCAAGGTCTATCCCCGCAGAACTCAAAGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS GCA 72 bp | TGGGCCTTGTTCTTCCCGCAGATCTGCTTGGACTGCTaGCAGAAGTCAGAGAGCTTCTGGGCTAATGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WALFFPQICLDC*QKSESFWANGP Trigger: AGGGCCATTAGCCCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS CAA 72 bp | ACAGTAGTCTGCAGGGCTTCCCCCAGAGCATCCACCTaGCTGTCCTCGCACATGAAGAACTGGCAGAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVVCRASPRAST*LSSHMKNWQRV Trigger: CACTCTCTGCCAGTTCTTCATGTGCGAGGACAGCAAGGTGGATGCTCTGGGGGAAGCCCTGCAGACTACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS CAA 90 bp | ATGTGGGGGAAGATGTTGTGGGCCTTGTTCTTCCCGCAGATCTGCTaGGACTGCTGCCAGAAGTCAGAGAGCTTCTGGGCTAATGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: MWGKMLWALFFPQIC*DCCQKSESFWANGP Trigger: AGGGCCATTAGCCCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTTCCCCCACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS CAA 90 bp | CGGATATCCCGAGAGAATATGGTGGCCACCCAGTCGCATCCTAGCTaGACGTCAATGTTCTGGGCAAGCTTCTCTAGGGTGGGTAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RISRENMVATQSHPS*TSMFWASFSRVGRW Trigger: CCACCTACCCACCCTAGAGAAGCTTGCCCAGAACATTGACGTCAAGCTAGGATGCGACTGGGTGGCCACCATATTCTCTCGGGATATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS CAA 90 bp | ACATGCTGCCTGAACGCTTCTTCCTCCCGTGGATGCCAGAGCTTTTaGTCTGCCAGGAGAATTCAGCAGACTCCAGGCTCTCAGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TCCLNASSSRGCQSF*SARRIQQTPGSQLP Trigger: GGGAAGCTGAGAGCCTGGAGTCTGCTGAATTCTCCTGGCAGACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136530.8 |
||
| CDS TCA 72 bp | ATGCAGCCTCTGCAGCAAAGTCAGCCGCGAACTTCTTaGGGACTTCAGCGCTGTCTTCCTTCACGAAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MQPLQQSQPRTS*GLQRCLPSRRA Trigger: GGCTCTTCGTGAAGGAAGACAGCGCTGAAGTCCTCAAGAAGTTCGCGGCTGACTTTGCTGCAGAGGCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS GCA 72 bp | TTGTGGGCCTTGTTCTTCCCGCAGATCTGCTTGGACTaGTGCCAGAAGTCAGAGAGCTTCTGGGCTAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWALFFPQICLD*CQKSESFWANG Trigger: GCCATTAGCCCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS GCA 72 bp | GGGAAGATGTTGTGGGCCTTGTTCTTCCCGCAGATCTaGTTGGACTGCTGCCAGAAGTCAGAGAGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GKMLWALFFPQI*LDCCQKSESFW Trigger: CCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
||
| CDS TCA 72 bp | GAGAGAATATGGTGGCCACCCAGTCGCATCCTAGCTTaGCGTCAATGTTCTGGGCAAGCTTCTCTAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ERIWWPPSRILA*RQCSGQASLGW Trigger: CCACCCTAGAGAAGCTTGCCCAGAACATTGACGTCAAGCTAGGATGCGACTGGGTGGCCACCATATTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
||
| CDS TCA 72 bp | CATGGAAGATCCAGGTGCTACACTCATCAGCCTTGGTaGTGTAGTTCTCAGGAAGCAGCCCAGAGCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGRSRCYTHQPW*CSSQEAAQSSQ Trigger: CTGGCTGCTCTGGGCTGCTTCCTGAGAACTACATCACCAAGGCTGATGAGTGTAGCACCTGGATCTTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS TCA 72 bp | AAGGCTACTTCCAGGTCTGAGGGCCGAGTGTGCTCCTaGCGAATGAAAGCAGCTTTTGAACCTCTGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: KATSRSEGRVCS*RMKAAFEPLGV Trigger: CACTCCCAGAGGTTCAAAAGCTGCTTTCATTCGTCAGGAGCACACTCGGCCCTCAGACCTGGAAGTAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129906.2 |
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| CDS GCA 72 bp | GCTGAGAACTTACATTTCCATCGACTGACAGTAGTCTaGAGGGCTTCCCCCAGAGCATCCACCTTGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AENLHFHRLTVV*RASPRASTLLS Trigger: GGACAGCAAGGTGGATGCTCTGGGGGAAGCCCTGCAGACTACTGTCAGTCGATGGAAATGTAAGTTCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS CCA 72 bp | AAGAACTGGCAGAGAGTGATGTGGGGGAAGATGTTGTaGGCCTTGTTCTTCCCGCAGATCTGCTTGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: KNWQRVMWGKML*ALFFPQICLDC Trigger: GCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTTCCCCCACATCACTCTCTGCCAGTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS CAA 72 bp | AAGATGTTGTGGGCCTTGTTCTTCCCGCAGATCTGCTaGGACTGCTGCCAGAAGTCAGAGAGCTTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: KMLWALFFPQIC*DCCQKSESFWA Trigger: AGCCCAGAAGCTCTCTGACTTCTGGCAGCAGTCCAAGCAGATCTGCGGGAAGAACAAGGCCCACAACATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044155.15 |
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| CDS TCA 72 bp | CAGATGATAGTGAGGGGTGTTGTCTCCCCAAGTCCTTaGTCTTCATACTGCCGCCTCTCTAACGCTCCATCG | + |
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Preference number: 6 (lower is better) Translates to: QMIVRGVVSPSP*SSYCRLSNAPS Trigger: CGATGGAGCGTTAGAGAGGCGGCAGTATGAAGATCAAGGACTTGGGGAGACAACACCCCTCACTATCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 72 bp | CAGTACTTCCCAAATACAACGTCCATCCTCTCCCCATaGCGACATACAAAGAGGCATCGCTTCTGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QYFPNTTSILSP*RHTKRHRFWGP Trigger: TGGACCCCAGAAGCGATGCCTCTTTGTATGTCGGCATGGGGAGAGGATGGACGTTGTATTTGGGAAGTACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 72 bp | CCATGGGTAAGGGGAAGGATGGGCGGGTCTGTCAGTTaGCATATTCCAGTTTCTCCCAATTCTTCGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PWVRGRMGGSVS*HIPVSPNSSQE Trigger: TTCCTGCGAAGAATTGGGAGAAACTGGAATATGGCAACTGACAGACCCGCCCATCCTTCCCCTTACCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS CCA 72 bp | ACCAGTCACATGCTGCCTGAACGCTTCTTCCTCCCGTaGATGCCAGAGCTTTTTGTCTGCCAGGAGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: TSHMLPERFFLP*MPELFVCQENS Trigger: TGAATTCTCCTGGCAGACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGACTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136530.8 |
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| CDS CAA 72 bp | GGTATGGGATCTTCCGGACCATTTGTACGAAGTCCTTaGAGTTCTGCGGGGATAGACCTTGGAGCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GMGSSGPFVRSP*SSAGIDLGADR Trigger: CCTGTCAGCTCCAAGGTCTATCCCCGCAGAACTCAAAGGACTTCGTACAAATGGTCCGGAAGATCCCATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS CAA 72 bp | CTCTCCTTCTCTTGGGCCAGGAGGAAAGGTCAACAATaGCTTCAGAACAGCGGGGAAAGTCCGAAGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: LSFSWARRKGQQ*LQNSGESPKAT Trigger: AGTAGCCTTCGGACTTTCCCCGCTGTTCTGAAGCAATTGTTGACCTTTCCTCCTGGCCCAAGAGAAGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129906.2 |
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| CDS CAA 90 bp | AGAAGCCTAGGTATGGGATCTTCCGGACCATTTGTACGAAGTCCTTaGAGTTCTGCGGGGATAGACCTTGGAGCTGACAGGTACACGCTT | + |
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Preference number: 6 (lower is better) Translates to: RSLGMGSSGPFVRSP*SSAGIDLGADRYTL Trigger: AAGCGTGTACCTGTCAGCTCCAAGGTCTATCCCCGCAGAACTCAAAGGACTTCGTACAAATGGTCCGGAAGATCCCATACCTAGGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 72 bp | TCCTCTGAGGTAAACTGTGAGGCATGTTCAGGTTGGTaGGTATGTAGCGGCCTTTGGCATCAAAGCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: SSEVNCEACSGW*VCSGLWHQSIG Trigger: CCCAATGCTTTGATGCCAAAGGCCGCTACATACGCACCAACCTGAACATGCCTCACAGTTTACCTCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS CCA 72 bp | CGCTCCTCTGAGGTAAACTGTGAGGCATGTTCAGGTTaGTGCGTATGTAGCGGCCTTTGGCATCAAAGCATT | + |
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Preference number: 6 (lower is better) Translates to: RSSEVNCEACSG*CVCSGLWHQSI Trigger: AATGCTTTGATGCCAAAGGCCGCTACATACGCACCAACCTGAACATGCCTCACAGTTTACCTCAGAGGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS TCA 72 bp | CACCCACTAGTCTTGCTTGCATACACCCAAACACAGTaGTTGGAGCATCTTTCTCGTAATCCCGGAAACCGC | + |
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Preference number: 6 (lower is better) Translates to: HPLVLLAYTQTQ*LEHLSRNPGNR Trigger: GCGGTTTCCGGGATTACGAGAAAGATGCTCCAATCACTGTGTTTGGGTGTATGCAAGCAAGACTAGTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 72 bp | GTCACATGCTGCCTGAACGCTTCTTCCTCCCGTGGATaGCAGAGCTTTTTGTTCTTTCAGAAGTCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VTCCLNASSSRG*QSFLFFQKSVL Trigger: CAGAACAGACTTCTGAAAGAACAAAAAGCTCTGGCATCCACGGGAGGAAGAAGCGTTCAGGCAGCATGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129906.2 |
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| CDS CAA 72 bp | GTTGGTGCGTATGTAGCGGCCTTTGGCATCAAAGCATaGGGACAGCCAGTACTTCCCAAATACAACGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VGAYVAAFGIKA*GQPVLPKYNVH Trigger: ATGGACGTTGTATTTGGGAAGTACTGGCTGTCCCAATGCTTTGATGCCAAAGGCCGCTACATACGCACCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 72 bp | CAGCTAACTCTGATGGAGGTATCCATGCCGGTAATGTaGTCCCAGCAACCCACTTTGTCCATTCAAATAAGC | + |
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Preference number: 6 (lower is better) Translates to: QLTLMEVSMPVM*SQQPTLSIQIS Trigger: GCTTATTTGAATGGACAAAGTGGGTTGCTGGGAGCACATTACCGGCATGGATACCTCCATCAGAGTTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 72 bp | ACCTTGGAGCTGACAGGTACACGCTTCGAGGGAAGATaGGTGGGCCACAATCAGAATGTTATTTCCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: TLELTGTRFEGR*VGHNQNVISFT Trigger: AGTAAAGGAAATAACATTCTGATTGTGGCCCACGCATCTTCCCTCGAAGCGTGTACCTGTCAGCTCCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS CAA 72 bp | TCAGAAGTCTGTTCTGTCTTTCCCCCTCTCCTTCTCTaGGGCCAGGAGGAAAGGTCAACAATTGCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SEVCSVFPPLLL*GQEERSTIASE Trigger: TTCTGAAGCAATTGTTGACCTTTCCTCCTGGCCCAAGAGAAGGAGAGGGGGAAAGACAGAACAGACTTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129906.2 |
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| CDS TCA 72 bp | TGTAGGTGTCATAGGATTCCGAAATCGCCAATTTGCTaGCTGGAATGTGAGGTCTGTAGGTTGTATCAACAC | + |
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Preference number: 6 (lower is better) Translates to: CRCHRIPKSPIC*LECEVCRLYQH Trigger: GTGTTGATACAACCTACAGACCTCACATTCCAGTCAGCAAATTGGCGATTTCGGAATCCTATGACACCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS GCA 72 bp | TTACTTTCTAACAAGGCTTCACCCACTAGTCTTGCTTaGATACACCCAAACACAGTGATTGGAGCATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLSNKASPTSLA*IHPNTVIGASF Trigger: GAAAGATGCTCCAATCACTGTGTTTGGGTGTATGCAAGCAAGACTAGTGGGTGAAGCCTTGTTAGAAAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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| CDS TCA 72 bp | CACTTATTATCTCTTTCGTCACCTGGAAACTCCTATTaGTGTAGGTGTCATAGGATTCCGAAATCGCCAATT | + |
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Preference number: 6 (lower is better) Translates to: HLLSLSSPGNSY*CRCHRIPKSPI Trigger: AATTGGCGATTTCGGAATCCTATGACACCTACATCAATAGGAGTTTCCAGGTGACGAAAGAGATAATAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044155.15 ENSMUST00000151485.8 |
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