Pregenerated sensors for UBAP1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000086228Ensembl transcript IDs: ENSMUST00000147185.3, ENSMUST00000215152.2, ENSMUST00000239433.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCAGATGGATGGCAGGTCTaGTCCTTCACTGTCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPDGWQV*SFTVSH Trigger: ATGGCTGACAGTGAAGGACCAGACCTGCCATCCATC...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| 3UTR TCA 72 bp | ATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTaGTCAGAGAGGTGTGGTCCCTGGGAGGGACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: IILYFGCFLQIC*SERCGPWEGQA Trigger: AGCCTGTCCCTCCCAGGGACCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | GGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTTGCTGGGCCAGGGGCTaGAGCCGGGCTGGTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GWMAGLVLHCQPCINVPACWARG*SRAGAQ Trigger: CTGAGCACCAGCCCGGCTCCAGCCCCTGGCCCAGCA...AGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | GGGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCGACATTTGGGAGCTGTaGTGCTGGGCCAGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GMDGRSGPSLSAMHQCPSDIWEL*CWARGW Trigger: CCAGCCCCTGGCCCAGCACCACAGCTCCCAAATGTC...GCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | GGGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCCAGCTCCGAGACATTTaGGAGCTGTGGTGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GMDGRSGPSLSAMHQCPSQLRDI*ELWCWA Trigger: GGCCCAGCACCACAGCTCCCAAATGTCTCGGAGCTG...GCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | GGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTCTTGTGGTTCCGCAATaGAGGCATGGCGCCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWMAGLVLHCQPCINVPALVVPQ*RHGAGG Trigger: ACCGCCGGCGCCATGCCTCCATTGCGGAACCACAAG...AGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR TCA 90 bp | GGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTCGACCACTGGCCCAATaGGGTCTTGCTCCTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: GWMAGLVLHCQPCINVPARPLAQ*GLAPLR Trigger: CCGAAGAGGAGCAAGACCTCATTGGGCCAGTGGTCG...AGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR TCA 90 bp | GGGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCGGAAGCCCATGTCACTaGACTGCTTCCAGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GMDGRSGPSLSAMHQCPSGSPCH*TASRAA Trigger: TGCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCC...GCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR GCA 90 bp | GATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTTCTGGAGCCGGGCTGGTaGTCAGGCTCAGTGTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGWQVWSFTVSHASMSQLLEPGW*SGSVCD Trigger: ATCGCACACTGAGCCTGAGCACCAGCCCGGCTCCAG...AAGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | GATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTTGCCCAAGGCGACCACTaGCCCAATGAGGTCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: DGWQVWSFTVSHASMSQLAQGDH*PNEVLL Trigger: GAGCAAGACCTCATTGGGCCAGTGGTCGCCTTGGGC...AAGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR TCA 90 bp | GATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTTCCAACAGCACCTCCTTaGTCCGGTCTTGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: DGWQVWSFTVSHASMSQLPTAPP*SGLAGS Trigger: GCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGG...AAGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR GCA 90 bp | GATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTTTGCCTCCCTGTCTTCTaGAGTGCCTCCATGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGWQVWSFTVSHASMSQLCLPVF*SASMAL Trigger: AAGGGCCATGGAGGCACTGCAGAAGACAGGGAGGCA...AAGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR GCA 90 bp | GGGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTCCTTGATCCGGTCTTaGTGGAAGCCCATGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: GMDGRSGPSLSAMHQCPSSLIRS*WKPMSL Trigger: CAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGA...GCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCAATTTGGGAGCTGTGGTaGTGGGCCAGGGGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPIWELW*WARGWS Trigger: GCTCCAGCCCCTGGCCCAGCACCACAGCTCCCAAAT...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTGGCGGTGGCGGGTCGTaGAGGCAGCTCCGAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SAGTKGVCHHHRHYLLMIGGGGS*RQLRDI Trigger: AATGTCTCGGAGCTGCCTCCACGACCCGCCACCGCC...AATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCATCTGCAGTGCCTCCATaGCCCTTCCCAGGGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPSAVPP*PFPGDS Trigger: GCTATCCCCTGGGAAGGGCCATGGAGGCACTGCAGA...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTGCTGGGCCAGGGGCTaGAGCCGGGCTGGTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWCWARG*SRAGAQ Trigger: CTGAGCACCAGCCCGGCTCCAGCCCCTGGCCCAGCA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGTAGGGGAGCCGGGCTaGGGGCTGCTGGAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWVGEPG*GLLESM Trigger: CATGGACTCCAGCAGCCCTCAGCCCGGCTCCCCTAC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | AGTGCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTGGCCCAATGAGGTCTTaGTCCTCTTCGGTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SAGTKGVCHHHRHYLLMIGPMRS*SSSVRA Trigger: TGCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCC...AATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCAAACTGGCTCAGGCTCTaGCTCCCTGTCTTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPNWLRL*LPVFCS Trigger: ACTGCAGAAGACAGGGAGGCAGAGCCTGAGCCAGTT...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCACCCATGTCACTGAACTaGTTCCAGAGCCGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPPMSLN*FQSRRN Trigger: GTTCCTGCGGCTCTGGAAGCAGTTCAGTGACATGGG...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGGGCTGGAGCCGGGCTaGTGCTCAGGCTCAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWGLEPG*CSGSVC Trigger: GCACACTGAGCCTGAGCACCAGCCCGGCTCCAGCCC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCGGGCTGAGGGCTGCTaGAGTCCATGCCCTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWRAEGC*SPCPPH Trigger: GTGAGGAGGGCATGGACTCCAGCAGCCCTCAGCCCG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGGCGGTGGCGGGTCGTaGAGGCAGCTCCGAGACATT | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWGGGGS*RQLRDI Trigger: AATGTCTCGGAGCTGCCTCCACGACCCGCCACCGCC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCAACTGAAACATCTCCATaGCCTCATCCACCAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPTETSP*PHPPAP Trigger: AGGCGCTGGTGGATGAGGCCATGGAGATGTTTCAGT...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCTGGAGCCGGGCTGGTaGTCAGGCTCAGTGTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWLEPGW*SGSVCD Trigger: ATCGCACACTGAGCCTGAGCACCAGCCCGGCTCCAG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGATTTGGGAGCTGTGGTaGTGGGCCAGGGGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWIWELW*WARGWS Trigger: GCTCCAGCCCCTGGCCCAGCACCACAGCTCCCAAAT...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGACATTTGGGAGCTGTaGTGCTGGGCCAGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWDIWEL*CWARGW Trigger: CCAGCCCCTGGCCCAGCACCACAGCTCCCAAATGTC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCTTGTGGTTCCGCAATaGAGGCATGGCGCCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWLVVPQ*RHGAGG Trigger: ACCGCCGGCGCCATGCCTCCATTGCGGAACCACAAG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCATTGATCCGGTCTTGCTaGAAGCCCATGTCACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPLIRSC*KPMSLN Trigger: GTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAA...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGAGCCCTTGGACACCTTaGAGGGGACACCATCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWSPWTP*RGHHRG Trigger: CCCTCGATGGTGTCCCCTTCAAGGTGTCCAAGGGCT...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCCAGGCTGGAGGGGCTaGTGCAATCCCCAGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWPGWRG*CNPQVI Trigger: AATGACCTGGGGATTGCATCAGCCCCTCCAGCCTGG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCGACCACTGGCCCAATaGGGTCTTGCTCCTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWRPLAQ*GLAPLR Trigger: CCGAAGAGGAGCAAGACCTCATTGGGCCAGTGGTCG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCAGCTCCGAGACATTTaGGAGCTGTGGTGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWQLRDI*ELWCWA Trigger: GGCCCAGCACCACAGCTCCCAAATGTCTCGGAGCTG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGCCCAAGGCGACCACTaGCCCAATGAGGTCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWAQGDH*PNEVLL Trigger: GAGCAAGACCTCATTGGGCCAGTGGTCGCCTTGGGC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTCTGCAGTGCCTCCATaGCCCTTCCCAGGGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWSAVPP*PFPGDS Trigger: GCTATCCCCTGGGAAGGGCCATGGAGGCACTGCAGA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGCAGGTGCAGGCACCTaGCTGTATTTTGGACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWAGAGT*LYFGLA Trigger: GGCCAGTCCAAAATACAGTCAGGTGCCTGCACCTGC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCAGCCTCTGGGTCTCTaGTTTGAGCAGGTGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWQPLGL*FEQVQA Trigger: TGCCTGCACCTGCTCAAATCAGAGACCCAGAGGCTG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGGAAGCCCATGTCACTaGACTGCTTCCAGAGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWGSPCH*TASRAA Trigger: TGCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCCAACAGCACCTCCTTaGTCCGGTCTTGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWPTAPP*SGLAGS Trigger: GCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGGCCCAATGAGGTCTTaGTCCTCTTCGGTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWGPMRS*SSSVRA Trigger: TGCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTGCCTCCCTGTCTTCTaGAGTGCCTCCATGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWCLPVF*SASMAL Trigger: AAGGGCCATGGAGGCACTGCAGAAGACAGGGAGGCA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGAACTGGCTCAGGCTCTaGCTCCCTGTCTTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWNWLRL*LPVFCS Trigger: ACTGCAGAAGACAGGGAGGCAGAGCCTGAGCCAGTT...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCCCATGTCACTGAACTaGTTCCAGAGCCGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWPMSLN*FQSRRN Trigger: GTTCCTGCGGCTCTGGAAGCAGTTCAGTGACATGGG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTCTTCAGGAGGTTCTTaGAGTCCAGCCTCTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWSSGGS*SPASGS Trigger: AGACCCAGAGGCTGGACTGCAAGAACCTCCTGAAGA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR GCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTCCTTGATCCGGTCTTaGTGGAAGCCCATGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWSLIRS*WKPMSL Trigger: CAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTTGCAGTCCAGCCTCTaGGTCTCTGATTTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWLQSSL*VSDLSR Trigger: CCTGCTCAAATCAGAGACCCAGAGGCTGGACTGCAA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGACTGAAACATCTCCATaGCCTCATCCACCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWTETSP*PHPPAP Trigger: AGGCGCTGGTGGATGAGGCCATGGAGATGTTTCAGT...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGAGCAAGATCCTCGGATaGCTGCTTCCACCCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWSKILG*LLPPKR Trigger: TCTTTTGGGTGGAAGCAGCCATCCGAGGATCTTGCT...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTTGATCCGGTCTTGCTaGAAGCCCATGTCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWLIRSC*KPMSLN Trigger: GTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR TCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCCTTCTTTTCCAGGCTaGAGTCATACATTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWPSFPG*SHTLCP Trigger: TGGGCACAATGTATGACTTCAGCCTGGAAAAGAAGG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CCA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGACTGTATTTTGGACTaGCCAGTAAGAACCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNPLFWMLSSNLLIREVWDCILD*PVRTRL Trigger: CAGCCTGGTTCTTACTGGCCAGTCCAAAATACAGTC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 90 bp | GGCGGTGGCGGGTCGTGGAGGCAGCTCCGAGACATTTGGGAGCTGTaGTGCTGGGCCAGGGGCTGGAGCCGGGCTGGTGCTCAGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGGGSWRQLRDIWEL*CWARGWSRAGAQAQ Trigger: CTGAGCCTGAGCACCAGCCCGGCTCCAGCCCCTGGCCCAGCACCACAGCTCCCAAATGTCTCGGAGCTGCCTCCACGACCCGCCACCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 90 bp | AGGCAGCTCCGAGACATTTGGGAGCTGTGGTGCTGGGCCAGGGGCTaGAGCCGGGCTGGTGCTCAGGCTCAGTGTGCGATGGCCGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RQLRDIWELWCWARG*SRAGAQAQCAMAAE Trigger: TTCCGCGGCCATCGCACACTGAGCCTGAGCACCAGCCCGGCTCCAGCCCCTGGCCCAGCACCACAGCTCCCAAATGTCTCGGAGCTGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS TCA 90 bp | AGCACATCCAGGGAGCAGCGACGATGGCTTGTAGGGGAGCCGGGCTaGGGGCTGCTGGAGTCCATGCCCTCCTCACAGGCAGAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STSREQRRWLVGEPG*GLLESMPSSQAEEV Trigger: CACCTCCTCTGCCTGTGAGGAGGGCATGGACTCCAGCAGCCCTCAGCCCGGCTCCCCTACAAGCCATCGTCGCTGCTCCCTGGATGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS TCA 90 bp | CCAGCGCCTCGTCGTAGCCCTGCCGCAGCAGCCTGTCGCAGGCACTaGGGTAGCCGAGAAACTGGCTCAGGCTCTGCCTCCCTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPRRSPAAAACRRH*GSRETGSGSASLSS Trigger: AGAAGACAGGGAGGCAGAGCCTGAGCCAGTTTCTCGGCTACCTCAGTGCCTGCGACAGGCTGCTGCGGCAGGGCTACGACGAGGCGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS TCA 90 bp | CCATGGCCCTTCCCAGGGGATAGCCCAAGGCGACCACTGGCCCAATaGGGTCTTGCTCCTCTTCGGTCAGGGCAGACAGCAGGTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PWPFPGDSPRRPLAQ*GLAPLRSGQTAGRV Trigger: CACCCGACCTGCTGTCTGCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCCAGTGGTCGCCTTGGGCTATCCCCTGGGAAGGGCCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 90 bp | GGGCTCGAGGACACGCGGTTAGTCTACTCTCCGAGAGCCGCCGCCTaGCGTCAGCCAGCTCAGACCTCATGTTTCGCAGCACATCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLEDTRLVYSPRAAA*RQPAQTSCFAAHPG Trigger: CCCTGGATGTGCTGCGAAACATGAGGTCTGAGCTGGCTGACGCCAGGCGGCGGCTCTCGGAGAGTAGACTAACCGCGTGTCCTCGAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 90 bp | CAGTGCCTCCATGGCCCTTCCCAGGGGATAGCCCAAGGCGACCACTaGCCCAATGAGGTCTTGCTCCTCTTCGGTCAGGGCAGACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QCLHGPSQGIAQGDH*PNEVLLLFGQGRQQ Trigger: CTGCTGTCTGCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCCAGTGGTCGCCTTGGGCTATCCCCTGGGAAGGGCCATGGAGGCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 90 bp | GCAGGAACTCCCCTGCCTGATGCTCGGAGAACTGAAACATCTCCATaGCCTCATCCACCAGCGCCTCGTCGTAGCCCTGCCGCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGTPLPDARRTETSP*PHPPAPRRSPAAAA Trigger: GGCTGCTGCGGCAGGGCTACGACGAGGCGCTGGTGGATGAGGCCATGGAGATGTTTCAGTTCTCCGAGCATCAGGCAGGGGAGTTCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 90 bp | GCACAGGCCACCAGCTCCTCCAGAGCCTGTTCGCGCCGATTACCGTaGACCAACAGCACCTCCTTGATCCGGTCTTGCTGGAAGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: AQATSSSRACSRRLP*TNSTSLIRSCWKPM Trigger: CATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAATCGGCGCGAACAGGCTCTGGAGGAGCTGGTGGCCTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS CCA 90 bp | AGGTCGGGTGCTGAATCAGGATGCAGTCTACAGGAGACGAGGGGCTaGGGTGTCTCCCTCAGAGGTGGTAAGCAGGTGTATGGGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSGAESGCSLQETRG*GVSLRGGKQVYGLR Trigger: CCTCAGCCCATACACCTGCTTACCACCTCTGAGGGAGACACCCCAGCCCCTCGTCTCCTGTAGACTGCATCCTGATTCAGCACCCGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS-3UTR CAA 90 bp | GGGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCGCAGCTCCGAGACATTaGGGAGCTGTGGTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMDGRSGPSLSAMHQCPSAAPRH*GAVVLG Trigger: GCCCAGCACCACAGCTCCCAAATGTCTCGGAGCTGC...GCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS GCA 90 bp | TCGCGCCGATTACCGTGGACCAACAGCACCTCCTTGATCCGGTCTTaGTGGAAGCCCATGTCACTGAACTGCTTCCAGAGCCGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRRLPWTNSTSLIRS*WKPMSLNCFQSRRN Trigger: GTTCCTGCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAATCGGCGCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS CCA 90 bp | CGCCGATTACCGTGGACCAACAGCACCTCCTTGATCCGGTCTTGCTaGAAGCCCATGTCACTGAACTGCTTCCAGAGCCGCAGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRLPWTNSTSLIRSC*KPMSLNCFQSRRNS Trigger: GGAGTTCCTGCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAATCGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS CCA 90 bp | CCTTCTGAAGCGTGGACCAACAGCACCTCCTTGATCCGGTCTTGCTaGAAGCCCATGTCACTGAACTGCTTCCAGAGCCGCAGGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSEAWTNSTSLIRSC*KPMSLNCFQSRRNS Trigger: GGAGTTCCTGCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGCTTCAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | GGATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTTGGCCCAATGAGGTCTaGCTCCTCTTCGGTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GWMAGLVLHCQPCINVPAWPNEV*LLFGQG Trigger: GCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCCA...AGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS GCA 90 bp | CCAGTAAGAACCAGGCTGGAGGGGCTGATGCAATCCCCAGGTCATTaGACTGATGGGAGCAAGATCCTCGGATGGCTGCTTCCACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVRTRLEGLMQSPGH*TDGSKILGWLLPPK Trigger: TTTGGGTGGAAGCAGCCATCCGAGGATCTTGCTCCCATCAGTGCAATGACCTGGGGATTGCATCAGCCCCTCCAGCCTGGTTCTTACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS GCA 90 bp | TTCCCTTCTGAAGCGTGGACCAACAGCACCTCCTTGATCCGGTCTTaGTGGAAGCCCATGTCACTGAACTGCTTCCAGAGCCGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPSEAWTNSTSLIRS*WKPMSLNCFQSRRN Trigger: GTTCCTGCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGCTTCAGAAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS TCA 90 bp | TCAGGGGTTCTGAGGTTGGGTGCAGGATGCTGCTGTTTTCCCTTCTaGAGCGTGGACCAACAGCACCTCCTTGATCCGGTCTTGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGVLRLGAGCCCFPF*SVDQQHLLDPVLLE Trigger: TTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGCTTCAGAAGGGAAAACAGCAGCATCCTGCACCCAACCTCAGAACCCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | GATGGATGGCAGGTCTGGTCCTTCACTGTCAGCCATGCATCAATGTCCCAGCTTGAAGCAACTGTGGGCTaGTGGTTCCGCAATGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGWQVWSFTVSHASMSQLEATVG*WFRNGG Trigger: GCCTCCATTGCGGAACCACAAGCCCACAGTTGCTTC...AAGCTGGGACATTGATGCATGGCTGACAGTGAAGGACCAGACCTGCCATCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS TCA 90 bp | CCTCCTCTTCTTCAGGAGGTTCTTGCAGTCCAGCCTCTGGGTCTCTaGTTTGAGCAGGTGCAGGCACCTGACTGTATTTTGGACTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPLLQEVLAVQPLGL*FEQVQAPDCILDWP Trigger: TGGCCAGTCCAAAATACAGTCAGGTGCCTGCACCTGCTCAAATCAGAGACCCAGAGGCTGGACTGCAAGAACCTCCTGAAGAAGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 90 bp | CTCCTCTTCCTCCTCTTCTTCAGGAGGTTCTTGCAGTCCAGCCTCTaGGTCTCTGATTTGAGCAGGTGCAGGCACCTGACTGTATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFLLFFRRFLQSSL*VSDLSRCRHLTVFW Trigger: CCAAAATACAGTCAGGTGCCTGCACCTGCTCAAATCAGAGACCCAGAGGCTGGACTGCAAGAACCTCCTGAAGAAGAGGAGGAAGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | GCTGGGACTAAAGGTGTGTGCCACCACCACCGGCATTATCTTTTAATGATTCCACTCCTTGATCCGGTCTaGCTGGAAGCCCATGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: AGTKGVCHHHRHYLLMIPLLDPV*LEAHVT Trigger: AGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAG...TGGAATCATTAAAAGATAATGCCGGTGGTGGTGGCACACACCTTTAGTCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGCAGCTCCGAGACATTaGGGAGCTGTGGTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWAAPRH*GAVVLG Trigger: GCCCAGCACCACAGCTCCCAAATGTCTCGGAGCTGC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTGGCCCAATGAGGTCTaGCTCCTCTTCGGTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWWPNEV*LLFGQG Trigger: GCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCCA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGAAGCCCTTGGACACCTaGAAGGGGACACCATCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWKPLDT*KGTPSR Trigger: CCTCGATGGTGTCCCCTTCAAGGTGTCCAAGGGCTT...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCTCTGGGTCTCTGATTaGAGCAGGTGCAGGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWLWVSD*SRCRHL Trigger: CAGGTGCCTGCACCTGCTCAAATCAGAGACCCAGAG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGAAGCAACTGTGGGCTaGTGGTTCCGCAATGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWEATVG*WFRNGG Trigger: GCCTCCATTGCGGAACCACAAGCCCACAGTTGCTTC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTCAGGGGTTCTGAGGTaGGGTGCAGGATGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWSGVLR*GAGCCC Trigger: ACAGCAGCATCCTGCACCCAACCTCAGAACCCCTGA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTTCTTCAGGAGGTTCTaGCAGTCCAGCCTCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWFFRRF*QSSLWV Trigger: GACCCAGAGGCTGGACTGCAAGAACCTCCTGAAGAA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGCTCCTTGATCCGGTCTaGCTGGAAGCCCATGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWLLDPV*LEAHVT Trigger: AGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAG...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGTCCATCACAAAGCCCTaGGACACCTTGAAGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWSITKP*DTLKGT Trigger: TGTCCCCTTCAAGGTGTCCAAGGGCTTTGTGATGGA...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS-3UTR CAA 90 bp | CATAATCCTTTATTTTGGATGCTTTCTTCAAATCTGCTGATCAGAGAGGTGTGGGCACCTGACTGTATTTaGGACTGGCCAGTAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HNPLFWMLSSNLLIREVWAPDCI*DWPVRT Trigger: GGTTCTTACTGGCCAGTCCAAAATACAGTCAGGTGC...CCACACCTCTCTGATCAGCAGATTTGAAGAAAGCATCCAAAATAAAGGATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 72 bp | GCTGGAGCCGGGCTGGTGCTCAGGCTCAGTGTGCGATaGCCGCGGAAGCGGTGCAGGAGGGCTCGAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: AGAGLVLRLSVR*PRKRCRRARGH Trigger: GTGTCCTCGAGCCCTCCTGCACCGCTTCCGCGGCCATCGCACACTGAGCCTGAGCACCAGCCCGGCTCCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 72 bp | CCGCAATGGAGGCATGGCGCCGGCGGTGGCGGGTCGTaGAGGCAGCTCCGAGACATTTGGGAGCTGTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQWRHGAGGGGS*RQLRDIWELWC Trigger: GCACCACAGCTCCCAAATGTCTCGGAGCTGCCTCCACGACCCGCCACCGCCGGCGCCATGCCTCCATTGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 72 bp | AAGCAACTGTGGGCTTGTGGTTCCGCAATGGAGGCATaGCGCCGGCGGTGGCGGGTCGTGGAGGCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: KQLWACGSAMEA*RRRWRVVEAAP Trigger: CGGAGCTGCCTCCACGACCCGCCACCGCCGGCGCCATGCCTCCATTGCGGAACCACAAGCCCACAGTTGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
||
| CDS TCA 72 bp | AGGGAGCAGCGACGATGGCTTGTAGGGGAGCCGGGCTaGGGGCTGCTGGAGTCCATGCCCTCCTCACAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: REQRRWLVGEPG*GLLESMPSSQA Trigger: TGCCTGTGAGGAGGGCATGGACTCCAGCAGCCCTCAGCCCGGCTCCCCTACAAGCCATCGTCGCTGCTCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
||
| CDS TCA 72 bp | CGTCGTAGCCCTGCCGCAGCAGCCTGTCGCAGGCACTaGGGTAGCCGAGAAACTGGCTCAGGCTCTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRSPAAAACRRH*GSRETGSGSAS Trigger: GGAGGCAGAGCCTGAGCCAGTTTCTCGGCTACCTCAGTGCCTGCGACAGGCTGCTGCGGCAGGGCTACGACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 72 bp | GCTTGTGGTTCCGCAATGGAGGCATGGCGCCGGCGGTaGCGGGTCGTGGAGGCAGCTCCGAGACATTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACGSAMEAWRRR*RVVEAAPRHLG Trigger: TCCCAAATGTCTCGGAGCTGCCTCCACGACCCGCCACCGCCGGCGCCATGCCTCCATTGCGGAACCACAAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
||
| CDS CCA 72 bp | CATGGCCCTTCCCAGGGGATAGCCCAAGGCGACCACTaGCCCAATGAGGTCTTGCTCCTCTTCGGTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HGPSQGIAQGDH*PNEVLLLFGQG Trigger: GCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCCAGTGGTCGCCTTGGGCTATCCCCTGGGAAGGGCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CAA 72 bp | GGGATAGCCCAAGGCGACCACTGGCCCAATGAGGTCTaGCTCCTCTTCGGTCAGGGCAGACAGCAGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GIAQGDHWPNEV*LLFGQGRQQVG Trigger: CCCGACCTGCTGTCTGCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCCAGTGGTCGCCTTGGGCTATCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CAA 90 bp | AGAGGTGGTAAGCAGGTGTATGGGCTGAGGGAAGCAACTGTGGGCTaGTGGTTCCGCAATGGAGGCATGGCGCCGGCGGTGGCGGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: RGGKQVYGLREATVG*WFRNGGMAPAVAGR Trigger: ACGACCCGCCACCGCCGGCGCCATGCCTCCATTGCGGAACCACAAGCCCACAGTTGCTTCCCTCAGCCCATACACCTGCTTACCACCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 72 bp | CCCCTGCCTGATGCTCGGAGAACTGAAACATCTCCATaGCCTCATCCACCAGCGCCTCGTCGTAGCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PLPDARRTETSP*PHPPAPRRSPA Trigger: GGCAGGGCTACGACGAGGCGCTGGTGGATGAGGCCATGGAGATGTTTCAGTTCTCCGAGCATCAGGCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS TCA 72 bp | CTCCTCTTCGGTCAGGGCAGACAGCAGGTCGGGTGCTaGATCAGGATGCAGTCTACAGGAGACGAGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLFGQGRQQVGC*IRMQSTGDEGL Trigger: CAGCCCCTCGTCTCCTGTAGACTGCATCCTGATTCAGCACCCGACCTGCTGTCTGCCCTGACCGAAGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS TCA 72 bp | TTCCCAGGGGATAGCCCAAGGCGACCACTGGCCCAATaGGGTCTTGCTCCTCTTCGGTCAGGGCAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: FPGDSPRRPLAQ*GLAPLRSGQTA Trigger: TGCTGTCTGCCCTGACCGAAGAGGAGCAAGACCTCATTGGGCCAGTGGTCGCCTTGGGCTATCCCCTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000239433.2 |
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| CDS CCA 72 bp | ACCAGCTCCTCCAGAGCCTGTTCGCGCCGATTACCGTaGACCAACAGCACCTCCTTGATCCGGTCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TSSSRACSRRLP*TNSTSLIRSCW Trigger: CCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAATCGGCGCGAACAGGCTCTGGAGGAGCTGGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS TCA 72 bp | GCTGGAGGGGCTGATGCAATCCCCAGGTCATTGCACTaGTGGGAGCAAGATCCTCGGATGGCTGCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: AGGADAIPRSLH*WEQDPRMAAST Trigger: GGTGGAAGCAGCCATCCGAGGATCTTGCTCCCATCAGTGCAATGACCTGGGGATTGCATCAGCCCCTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 72 bp | GCGTGGACCAACAGCACCTCCTTGATCCGGTCTTGCTaGAAGCCCATGTCACTGAACTGCTTCCAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AWTNSTSLIRSC*KPMSLNCFQSR Trigger: GCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 72 bp | CCGTGGACCAACAGCACCTCCTTGATCCGGTCTTGCTaGAAGCCCATGTCACTGAACTGCTTCCAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PWTNSTSLIRSC*KPMSLNCFQSR Trigger: GCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS CAA 90 bp | TTCGCGCCGATTACCGTGGACCAACAGCACCTCCTTGATCCGGTCTaGCTGGAAGCCCATGTCACTGAACTGCTTCCAGAGCCGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: FAPITVDQQHLLDPV*LEAHVTELLPEPQE Trigger: TTCCTGCGGCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAATCGGCGCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS GCA 72 bp | ACCAGGCTGGAGGGGCTGATGCAATCCCCAGGTCATTaGACTGATGGGAGCAAGATCCTCGGATGGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TRLEGLMQSPGH*TDGSKILGWLL Trigger: AAGCAGCCATCCGAGGATCTTGCTCCCATCAGTGCAATGACCTGGGGATTGCATCAGCCCCTCCAGCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS TCA 72 bp | CTGAGGTTGGGTGCAGGATGCTGCTGTTTTCCCTTCTaGAGCGTGGACCAACAGCACCTCCTTGATCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: LRLGAGCCCFPF*SVDQQHLLDPV Trigger: GACCGGATCAAGGAGGTGCTGTTGGTCCACGCTTCAGAAGGGAAAACAGCAGCATCCTGCACCCAACCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS GCA 72 bp | GAAGCGTGGACCAACAGCACCTCCTTGATCCGGTCTTaGTGGAAGCCCATGTCACTGAACTGCTTCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: EAWTNSTSLIRS*WKPMSLNCFQS Trigger: GCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 72 bp | TGGGTGCAGGATGCTGCTGTTTTCCCTTCTGAAGCGTaGACCAACAGCACCTCCTTGATCCGGTCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: WVQDAAVFPSEA*TNSTSLIRSCW Trigger: CCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGCTTCAGAAGGGAAAACAGCAGCATCCTGCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS GCA 72 bp | TTACCGTGGACCAACAGCACCTCCTTGATCCGGTCTTaGTGGAAGCCCATGTCACTGAACTGCTTCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LPWTNSTSLIRS*WKPMSLNCFQS Trigger: GCTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS CCA 72 bp | CTCCTCTTCTTCAGGAGGTTCTTGCAGTCCAGCCTCTaGGTCTCTGATTTGAGCAGGTGCAGGCACCTGACT | + |
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Preference number: 6 (lower is better) Translates to: LLFFRRFLQSSL*VSDLSRCRHLT Trigger: AGTCAGGTGCCTGCACCTGCTCAAATCAGAGACCCAGAGGCTGGACTGCAAGAACCTCCTGAAGAAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 72 bp | TTTGAGCAGGTGCAGGCACCTGACTGTATTTTGGACTaGCCAGTAAGAACCAGGCTGGAGGGGCTGATGCAA | + |
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Preference number: 6 (lower is better) Translates to: FEQVQAPDCILD*PVRTRLEGLMQ Trigger: TTGCATCAGCCCCTCCAGCCTGGTTCTTACTGGCCAGTCCAAAATACAGTCAGGTGCCTGCACCTGCTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CAA 72 bp | ATTACCGTGGACCAACAGCACCTCCTTGATCCGGTCTaGCTGGAAGCCCATGTCACTGAACTGCTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ITVDQQHLLDPV*LEAHVTELLPE Trigger: CTCTGGAAGCAGTTCAGTGACATGGGCTTCCAGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239433.2 |
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| CDS TCA 72 bp | CTTCAGGAGGTTCTTGCAGTCCAGCCTCTGGGTCTCTaGTTTGAGCAGGTGCAGGCACCTGACTGTATTTTG | + |
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Preference number: 6 (lower is better) Translates to: LQEVLAVQPLGL*FEQVQAPDCIL Trigger: CAAAATACAGTCAGGTGCCTGCACCTGCTCAAATCAGAGACCCAGAGGCTGGACTGCAAGAACCTCCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147185.3 |
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| CDS CCA 72 bp | CCAGGTCATTGCACTGATGGGAGCAAGATCCTCGGATaGCTGCTTCCACCCAAAAGAGAGCCTTCTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGHCTDGSKILG*LLPPKREPSFP Trigger: TGGAAAAGAAGGCTCTCTTTTGGGTGGAAGCAGCCATCCGAGGATCTTGCTCCCATCAGTGCAATGACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000215152.2 |
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| CDS TCA 72 bp | CTGCTTCCACCCAAAAGAGAGCCTTCTTTTCCAGGCTaGAGTCATACATTGTGCCCAGCAGGAGCTCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LLPPKREPSFPG*SHTLCPAGALY Trigger: GTAGAGAGCTCCTGCTGGGCACAATGTATGACTTCAGCCTGGAAAAGAAGGCTCTCTTTTGGGTGGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147185.3 ENSMUST00000215152.2 |
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