Pregenerated sensors for UBAC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041765Ensembl transcript IDs: ENSMUST00000039803.7, ENSMUST00000226998.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGCAAGGATGGGGCCAGGGAAGGTGTGCTGCCAGAAGGGCTGGTaGTGTATGGAGGGCTGCAGGCTGGCCCAGGGTGGGCAGGCCGGG | + |
|
Preference number: 1 (lower is better) Translates to: GARMGPGKVCCQKGW*CMEGCRLAQGGQAG Trigger: CCCGGCCTGCCCACCCTGGGCCAGCCTGCAGCCCTCCATACACCACCAGCCCTTCTGGCAGCACACCTTCCCTGGCCCCATCCTTGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 90 bp | CCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGGTGTGCTaGCAGAAGGGCTGGTGGTGTATGGAGGGCTGCAGGCTGGCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: PHPLQGARMGPGKVC*QKGWWCMEGCRLAQ Trigger: CTGGGCCAGCCTGCAGCCCTCCATACACCACCAGCCCTTCTGGCAGCACACCTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 90 bp | GCTGCCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTaGCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: AASCLHLPDCLHSGH*LTHYKGQGWGQGRC Trigger: ACACCTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CCA 90 bp | TGTCTGCACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATaGGGCCAGGGAAGGTGTGCTGCCAGAAGGGCTGGTGGTGTATGG | + |
|
Preference number: 1 (lower is better) Translates to: CLHSGHCLTHYKGQG*GQGRCAARRAGGVW Trigger: CCATACACCACCAGCCCTTCTGGCAGCACACCTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGCAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR TCA 90 bp | ACAGCTGCTCTTGCTCACAGGGGCTGCCTCCTGCTTACACCTCCCTaGCTGTCTGCACAGTGGGCACTGCCTCACCCACTACAAGGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: TAALAHRGCLLLTPP*LSAQWALPHPLQGA Trigger: TGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 90 bp | TCTTGCTCACAGGGGCTGCCTCCTGCTTACACCTCCCTGACTGTCTaGACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATGGG | + |
|
Preference number: 1 (lower is better) Translates to: SCSQGLPPAYTSLTV*TVGTASPTTRGKDG Trigger: CCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 90 bp | CACCCGGTGCAGTTTGCTTACGGGACAGTCGTCAATTCCTACAGCTaGTCTTGCTCACAGGGGCTGCCTCCTGCTTACACCTCCCTGACT | + |
|
Preference number: 1 (lower is better) Translates to: HPVQFAYGTVVNSYS*SCSQGLPPAYTSLT Trigger: AGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTCCCGTAAGCAAACTGCACCGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 90 bp | GTGCAGTTTGCTTACGGGACAGTCGTCAATTCCTACAGCTGCTCTTaGTCACAGGGGCTGCCTCCTGCTTACACCTCCCTGACTGTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: VQFAYGTVVNSYSCS*SQGLPPAYTSLTVC Trigger: GCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTCCCGTAAGCAAACTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGAGGGCTGGTGGTGTATaGAGGGCTGCAGGCTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: AQWALPHPLQGARMGPGKRAGGV*RAAGWP Trigger: GGGCCAGCCTGCAGCCCTCCATACACCACCAGCCCT...CTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACTCCAGGGAAGGTGTGCTaGCAGAAGGGCTGGTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PPAYTSLTVCTVGTASPTPGKVC*QKGWWC Trigger: ACACCACCAGCCCTTCTGGCAGCACACCTTCCCTGG...AGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACTGGGCAGACTCTAGGCTaGAGGAGGCTCATCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PPAYTSLTVCTVGTASPTGQTLG*RRLISS Trigger: GCTGGAGATGAGCCTCCTCCAGCCTAGAGTCTGCCC...AGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR GCA 90 bp | GGGGCAGACTCTAGGCTGGAGGAGGCTCATCTCCAGCTCCCTCTGTCACTGAGAACCTGTGCTGGGGTCTaGTTGGTCCTCAGGCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: GADSRLEEAHLQLPLSLRTCAGV*LVLRLM Trigger: CATCAGCCTGAGGACCAAGCAGACCCCAGCACAGGT...TCTCAGTGACAGAGGGAGCTGGAGATGAGCCTCCTCCAGCCTAGAGTCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CAA 90 bp | GGTGCAGTTTGCTTACGGGACAGTCGTCAATTCCTACAGCTGCTCTaGCTCACAGGGGCTGCCTCCTGCTTACACCTCCCTGACTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GAVCLRDSRQFLQLL*LTGAASCLHLPDCL Trigger: CAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTCCCGTAAGCAAACTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR GCA 90 bp | GACAGTCGTCAATTCCTACAGCTGCTCTTGCTCACAGGGGCTGCCTCCTGCTTAACCTCCCTGACTGTCTaGACAGTGGGCACTGCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: DSRQFLQLLLLTGAASCLTSLTV*TVGTAS Trigger: TGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGT...TAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR TCA 90 bp | GGCAACCATCTTGGATTTAAGGACAGTGTATGGTGGGAACCACCGTCTCCTCTTGCTTGGTCCTCAGGCTaGTGTGGTGGCGGGCACATC | + |
|
Preference number: 2 (lower is better) Translates to: GNHLGFKDSVWWEPPSPLAWSSG*CGGGHI Trigger: GATGTGCCCGCCACCACATCAGCCTGAGGACCAAGC...AAGAGGAGACGGTGGTTCCCACCATACACTGTCCTTAAATCCAAGATGGTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCAGACTCTAGGCTGGAGGAGGCTCATCTCCAGCTCCCTCTGTCACTGAGATTTAAGGACAGTGTATaGTGGGAACCACCGTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GADSRLEEAHLQLPLSLRFKDSV*WEPPSP Trigger: AGGAGACGGTGGTTCCCACCATACACTGTCCTTAAA...TCTCAGTGACAGAGGGAGCTGGAGATGAGCCTCCTCCAGCCTAGAGTCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR GCA 90 bp | TTGACACATTGCTGCTCACTGTGCAGAATACACCCGGTGCAGTTTGCTTACGGGACAGTTGTCTCTCTCTaGGGTGCTATAAAACAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LTHCCSLCRIHPVQFAYGTVVSL*GAIKQP Trigger: TGGCTGTTTTATAGCACCGCAGAGAGAGACAACTGT...CCCGTAAGCAAACTGCACCGGGTGTATTCTGCACAGTGAGCAGCAATGTGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR TCA 90 bp | CGGGGCATTCTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGAAATGGCAAACTTATTTaGTACTACACGGCAACCATC | + |
|
Preference number: 2 (lower is better) Translates to: RGILEPHTSTGLSVLKAGNGKLI*YYTATI Trigger: GATGGTTGCCGTGTAGTATCAAATAAGTTTGCCATT...TCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGAATGCCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CAA 90 bp | TTTATTGTAAGTATCACACACCTAGATTTGCATCAATTTGACACATaGCTGCTCACTGTGCAGAATACACCCGGTGCAGTTTGCTTACGG | + |
|
Preference number: 2 (lower is better) Translates to: FIVSITHLDLHQFDT*LLTVQNTPGAVCLR Trigger: CCGTAAGCAAACTGCACCGGGTGTATTCTGCACAGTGAGCAGCAATGTGTCAAATTGATGCAAATCTAGGTGTGTGATACTTACAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 72 bp | GGCTGGCCCAGGGTGGGCAGGCCGGGGCTGAGCCATTaGTGGCCAGCGCCTGCTCTCTGCACAGCCCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: GWPRVGRPGLSH*WPAPALCTAPL Trigger: TAGTGGGGCTGTGCAGAGAGCAGGCGCTGGCCAGCAATGGCTCAGCCCCGGCCTGCCCACCCTGGGCCAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CCA 72 bp | TGGCCCAGGGTGGGCAGGCCGGGGCTGAGCCATTGCTaGCCAGCGCCTGCTCTCTGCACAGCCCCACTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: WPRVGRPGLSHC*PAPALCTAPLS Trigger: ACTTAGTGGGGCTGTGCAGAGAGCAGGCGCTGGCCAGCAATGGCTCAGCCCCGGCCTGCCCACCCTGGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CCA 72 bp | ATGGGGCCAGGGAAGGTGTGCTGCCAGAAGGGCTGGTaGTGTATGGAGGGCTGCAGGCTGGCCCAGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MGPGKVCCQKGW*CMEGCRLAQGG Trigger: CCCACCCTGGGCCAGCCTGCAGCCCTCCATACACCACCAGCCCTTCTGGCAGCACACCTTCCCTGGCCCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 72 bp | CCACTACAAGGGGCAAGGATGGGGCCAGGGAAGGTGTaGTGCCAGAAGGGCTGGTGGTGTATGGAGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLQGARMGPGKV*CQKGWWCMEGC Trigger: GCAGCCCTCCATACACCACCAGCCCTTCTGGCAGCACACCTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 72 bp | CAGGGGCTGCCTCCTGCTTACACCTCCCTGACTGTCTaGACAGTGGGCACTGCCTCACCCACTACAAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGLPPAYTSLTV*TVGTASPTTRG Trigger: GCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CCA 72 bp | AGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATaGGGCCAGGGAAGGTGTGCTGCCAGAAGGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SGHCLTHYKGQG*GQGRCAARRAG Trigger: ACCAGCCCTTCTGGCAGCACACCTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR TCA 72 bp | CTTGCTCACAGGGGCTGCCTCCTGCTTACACCTCCCTaGCTGTCTGCACAGTGGGCACTGCCTCACCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: LAHRGCLLLTPP*LSAQWALPHPL Trigger: TAGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 72 bp | CCACCGTCTCCTCTTGAGAACACCTGTGCTGGGGTCTaGTTGGTCCTCAGGCTGATGTGGTGGCGGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: PPSPLENTCAGV*LVLRLMWWRAH Trigger: ATGTGCCCGCCACCACATCAGCCTGAGGACCAAGCAGACCCCAGCACAGGTGTTCTCAAGAGGAGACGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR TCA 72 bp | AGCCTTTCTGAGGTCACATGGCCTGCCGCCCTTCCCTaGCGTGAGGATGAGCAGACTGCACTCGAGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLSEVTWPAALP*REDEQTALELQ Trigger: CTGAAGCTCGAGTGCAGTCTGCTCATCCTCACGTCAGGGAAGGGCGGCAGGCCATGTGACCTCAGAAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGAAGGGCTGGTGGTGTATGGAGGGCTGCAGGCTGGCCCAGGGTGGGCAGGTACACGGCAACCATCTaGGATTTAAGGACAGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ARRAGGVWRAAGWPRVGRYTATI*DLRTVY Trigger: ATACACTGTCCTTAAATCCAAGATGGTTGCCGTGTA...CCTGCCCACCCTGGGCCAGCCTGCAGCCCTCCATACACCACCAGCCCTTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR TCA 72 bp | AGAACACCTGTGCTGGGGTCTGCTTGGTCCTCAGGCTaGTGTGGTGGCGGGCACATCACTGTCATACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RTPVLGSAWSSG*CGGGHITVIQW Trigger: CCACTGTATGACAGTGATGTGCCCGCCACCACATCAGCCTGAGGACCAAGCAGACCCCAGCACAGGTGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 72 bp | GCTTACGGGACAGTCGTCAATTCCTACAGCTGCTCTTaGTCACAGGGGCTGCCTCCTGCTTACACCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AYGTVVNSYSCS*SQGLPPAYTSL Trigger: CAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTCCCGTAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGCATTCTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGATGTGCTGGGGTCTGCTaGGTCCTCAGGCTGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RGILEPHTSTGLSVLKAGCAGVC*VLRLMW Trigger: CCACATCAGCCTGAGGACCAAGCAGACCCCAGCACA...TCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGAATGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CCA 72 bp | GGCATCACGGGGCATTCTAGAACCTCACACCAGCACTaGATTATCTGTACTGAAAGCAGGAGTTGGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GITGHSRTSHQH*IICTESRSWGR Trigger: TCTGCCCCAACTCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGAATGCCCCGTGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR GCA 72 bp | AGACTGCACTCGAGCTTCAGGACAGTTGTCTCTCTCTaGGGTGCTATAAAACAGCCACCGAAACCTGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: RLHSSFRTVVSL*GAIKQPPKPVT Trigger: GGTTACAGGTTTCGGTGGCTGTTTTATAGCACCGCAGAGAGAGACAACTGTCCTGAAGCTCGAGTGCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CCA 72 bp | CTACACGGCAACCATCTTGGATTTAAGGACAGTGTATaGTGGGAACCACCGTCTCCTCTTGAGAACACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHGNHLGFKDSV*WEPPSPLENTC Trigger: ACAGGTGTTCTCAAGAGGAGACGGTGGTTCCCACCATACACTGTCCTTAAATCCAAGATGGTTGCCGTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGAACGGGCCCAGGATCTaGGCCACCTGGACTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQWALPHPLQGARMGPGKNGPRI*ATWTLG Trigger: CCCAAGAGTCCAGGTGGCGCAGATCCTGGGCCCGTT...CTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGCTCCCATCCCAACCCTaGCCTCGCTGGTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQWALPHPLQGARMGPGKLPSQP*PRWWVL Trigger: CAGAACCCACCAGCGAGGCCAGGGTTGGGATGGGAG...CTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | CACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGGTGTGCTGCCAGAAGGGCCCATTCTGCCAGGGATaGGGAGCACCTGGTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HPLQGARMGPGKVCCQKGPFCQG*GAPGGP Trigger: AGGTCCACCAGGTGCTCCGCATCCCTGGCAGAATGG...GCCCTTCTGGCAGCACACCTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | CACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGGTGTGCTGCCAGAAGGGCTCTGGATGTCCACGGTaGCTCCCATCCCAACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPLQGARMGPGKVCCQKGSGCPR*LPSQPW Trigger: CCAGGGTTGGGATGGGAGCCACCGTGGACATCCAGA...GCCCTTCTGGCAGCACACCTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | AACTCGGCCATTCTGCCAGGGATGCGGAGCACCTGGTGGACCTGGAGCACTTTGAACGGGCCCAGGATCTaGGCCACCTGGACTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSAILPGMRSTWWTWSTLNGPRI*ATWTLG Trigger: CCCAAGAGTCCAGGTGGCGCAGATCCTGGGCCCGTT...CAAAGTGCTCCAGGTCCACCAGGTGCTCCGCATCCCTGGCAGAATGGCCGAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCTGCCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCAGGATCTGCGCCACCTaGACTCTTGGGATGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAASCLHLPDCLHSGHCLRICAT*TLGMEQ Trigger: CTGCTCCATCCCAAGAGTCCAGGTGGCGCAGATCCT...GAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGCCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCCTCACTTGTGCAAACTaGGAGAGCATCAGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GAASCLHLPDCLHSGHCLLTCAN*ESISCR Trigger: CCGGCAGCTGATGCTCTCTCAGTTTGCACAAGTGAG...GAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CAA 72 bp | CCGTCTCCTCTTGAGAACACCTGTGCTGGGGTCTGCTaGGTCCTCAGGCTGATGTGGTGGCGGGCACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLENTCAGVC*VLRLMWWRAHH Trigger: GTGATGTGCCCGCCACCACATCAGCCTGAGGACCAAGCAGACCCCAGCACAGGTGTTCTCAAGAGGAGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | AGGGATGCGGAGCACCTGGTGGACCTGGAGCACTTTGCGGTCATAGCACATGCCAGGATCTGCGCCACCTaGACTCTTGGGATGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDAEHLVDLEHFAVIAHARICAT*TLGMEQ Trigger: CTGCTCCATCCCAAGAGTCCAGGTGGCGCAGATCCT...GGCATGTGCTATGACCGCAAAGTGCTCCAGGTCCACCAGGTGCTCCGCATCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGCCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCTCTGCAAGTCGTGCTTaGCAGCATGGAGGTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: GAASCLHLPDCLHSGHCLSASRA*QHGGHT Trigger: TGTATGACCTCCATGCTGTCAAGCACGACTTGCAGA...GAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | CGGCCATTCTGCCAGGGATGCGGAGCACCTGGTGGACCTGGAGCACTTTGCGGTTCAATGTCTTGTTTGTaGTGGACAACGGGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPFCQGCGAPGGPGALCGSMSCL*WTTGPG Trigger: TCCTGGGCCCGTTGTCCATCACAAACAAGACATTGA...ACCGCAAAGTGCTCCAGGTCCACCAGGTGCTCCGCATCCCTGGCAGAATGGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACTCAACCCTGGCCTCGCTaGTGGGTTCTGAAGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPAYTSLTVCTVGTASPTQPWPR*WVLKMR Trigger: TCTCATCTTCAGAACCCACCAGCGAGGCCAGGGTTG...AGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | TCCTACAGCTGCTCTTGCTCACAGGGGCTGCCTCCTGCTTACACCTCCCTGACTGGACCTGGAGCACTTTaGGGTCATAGCACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYSCSCSQGLPPAYTSLTGPGAL*GHSTCQ Trigger: CTGGCATGTGCTATGACCGCAAAGTGCTCCAGGTCC...AGTCAGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | GACAGTCGTCAATTCCTACAGCTGCTCTTGCTCACAGGGGCTGCCTCCTGCTTAAGCTGCCGGTCCAGCTaGTCCATCCTCTGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSRQFLQLLLLTGAASCLSCRSS*SILCCL Trigger: GAGACAGCAGAGGATGGAGCAGCTGGACCGGCAGCT...TAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACTCTTGGGATGGAGCAGTaGAATGGAACAAAGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPAYTSLTVCTVGTASPTLGMEQ*NGTKRA Trigger: CGCTCTCTTTGTTCCATTTCACTGCTCCATCCCAAG...AGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CAA 72 bp | TGCTTACGGGACAGTCGTCAATTCCTACAGCTGCTCTaGCTCACAGGGGCTGCCTCCTGCTTACACCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLRDSRQFLQLL*LTGAASCLHLP Trigger: AGGGAGGTGTAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTCCCGTAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | GCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACTACAAGGTCAATGTCTTGTTTGTaGTGGACAACGGGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AYTSLTVCTVGTASPTTRSMSCL*WTTGPG Trigger: TCCTGGGCCCGTTGTCCATCACAAACAAGACATTGA...CCTTGTAGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACGATGGAGCAGTGAAATaGAACAAAGAGAGCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ASCLHLPDCLHSGHCLTHDGAVK*NKESEH Trigger: GTGTTCGCTCTCTTTGTTCCATTTCACTGCTCCATC...GTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACTCCTGGACTCTTGGGATaGAGCAGTGAAATGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PPAYTSLTVCTVGTASPTPGLLG*SSEMEQ Trigger: TTGTTCCATTTCACTGCTCCATCCCAAGAGTCCAGG...AGTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | GACAGTCGTCAATTCCTACAGCTGCTCTTGCTCACAGGGGCTGCCTCCTGCTTACCCTGGCCTCGCTGGTaGGTTCTGAAGATGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSRQFLQLLLLTGAASCLPWPRW*VLKMRR Trigger: TCTTCTCATCTTCAGAACCCACCAGCGAGGCCAGGG...TAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | CTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGAGTTGGGGCAGGGATGCGGAGCACCTaGTGGACCTGGAGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEPHTSTGLSVLKAGVGAGMRST*WTWSTL Trigger: CAAAGTGCTCCAGGTCCACCAGGTGCTCCGCATCCC...TGCCCCAACTCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CAA 72 bp | TTAAGGACAGTGTATGGTGGGAACCACCGTCTCCTCTaGAGAACACCTGTGCTGGGGTCTGCTTGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRTVYGGNHRLL*RTPVLGSAWSS Trigger: TGAGGACCAAGCAGACCCCAGCACAGGTGTTCTCAAGAGGAGACGGTGGTTCCCACCATACACTGTCCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | CTTGGATTTAAGGACAGTGTATGGTGGGAACCACCGTCTCCTCTTGAGAACACCATCCTCTGCTGTCTCTaGATGTCCACGGTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGFKDSVWWEPPSPLENTILCCL*MSTVAP Trigger: GGGAGCCACCGTGGACATCCAGAGACAGCAGAGGAT...GGTGTTCTCAAGAGGAGACGGTGGTTCCCACCATACACTGTCCTTAAATCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | TCTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGAGTTGGGGCAAAATCCCATCTCCATaGGGCGGGCAACCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTSHQHWIICTESRSWGKIPSP*GGQPAL Trigger: AAGAGCAGGTTGCCCGCCTCATGGAGATGGGATTTT...GCCCCAACTCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | TCTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGAGTTGGGGCAGTTGGTGGCCACATTaGGGTCATTGTTTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTSHQHWIICTESRSWGSWWPH*GHCLRP Trigger: GGGCCTCAAACAATGACCTCAATGTGGCCACCAACT...GCCCCAACTCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | GGATTATCTGTACTGAAAGCAGGAGTTGGGGCAGACTCTAGGCTGGAGGAGGCTCAAATCTGCAAGTCGTaGTTGACAGCATGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLSVLKAGVGADSRLEEAQICKS*LTAWRS Trigger: TGACCTCCATGCTGTCAAGCACGACTTGCAGATTTG...AGCCTCCTCCAGCCTAGAGTCTGCCCCAACTCCTGCTTTCAGTACAGATAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | GGCAACCATCTTGGATTTAAGGACAGTGTATGGTGGGAACCACCGTCTCCTCTTATGAGGCGGGCAACCTaGTCTTCAGAAACTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNHLGFKDSVWWEPPSPLMRRAT*SSETSR Trigger: CCTGGAAGTTTCTGAAGAGCAGGTTGCCCGCCTCAT...AAGAGGAGACGGTGGTTCCCACCATACACTGTCCTTAAATCCAAGATGGTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR GCA 90 bp | TTGACACATTGCTGCTCACTGTGCAGAATACACCCGGTGCAGTTTGCTTACGGGTTGACGCCTCACTTGTaGAAACTGAGAGAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTHCCSLCRIHPVQFAYGLTPHL*KLREHQ Trigger: CTGATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAA...CCCGTAAGCAAACTGCACCGGGTGTATTCTGCACAGTGAGCAGCAATGTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | CGGGGCATTCTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGAAAAATCAAACAAGGCTaGCAAGACCCAGGAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGILEPHTSTGLSVLKAGKIKQG*QDPGTQ Trigger: CTGGGTTCCTGGGTCTTGTCAGCCTTGTTTGATTTT...TCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGAATGCCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGATAAGTCCACTCATGGCTACAATCCAGATGTAGGACCCAGAGGTGAAAAAATCAAACAAGGCTaGCAAGACCCAGGAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARDKSTHGYNPDVGPRGEKIKQG*QDPGTQ Trigger: CTGGGTTCCTGGGTCTTGTCAGCCTTGTTTGATTTT...TTCACCTCTGGGTCCTACATCTGGATTGTAGCCATGAGTGGACTTATCTCTGGC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR TCA 90 bp | ATAGCACATGCCAGAGATAAGTCCACTCATGGCTACAATCCAGATGTAGGACCCCTTGGGATGGAGCAGTaGAATGGAACAAAGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IAHARDKSTHGYNPDVGPLGMEQ*NGTKRA Trigger: CGCTCTCTTTGTTCCATTTCACTGCTCCATCCCAAG...GGGTCCTACATCTGGATTGTAGCCATGAGTGGACTTATCTCTGGCATGTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR GCA 90 bp | GGCAACCATCTTGGATTTAAGGACAGTGTATGGTGGGAACCACCGTCTCCTCTTACCCAGCAAGAAGGATaGGAACTTCCTGCTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GNHLGFKDSVWWEPPSPLTQQEG*ELPASI Trigger: TATGGAAGCAGGAAGTTCGCATCCTTCTTGCTGGGT...AAGAGGAGACGGTGGTTCCCACCATACACTGTCCTTAAATCCAAGATGGTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | TCTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGAGTTGGGGCTCGTGCTTGACAGCATaGAGGTCATACACGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRTSHQHWIICTESRSWGSCLTA*RSYTKN Trigger: GTTCTTCGTGTATGACCTCCATGCTGTCAAGCACGA...GCCCCAACTCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CCA 90 bp | GATAAGTCCACTCATGGCTACAATCCAGATGTAGGACCCAGAGGTGAAAAGCTGCCTGGACTCTTGGGATaGAGCAGTGAAATGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: DKSTHGYNPDVGPRGEKLPGLLG*SSEMEQ Trigger: TTGTTCCATTTCACTGCTCCATCCCAAGAGTCCAGG...CAGCTTTTCACCTCTGGGTCCTACATCTGGATTGTAGCCATGAGTGGACTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR CCA 90 bp | ATAGCACATGCCAGAGATAAGTCCACTCATGGCTACAATCCAGATGTAGGACCCGATGGAGCAGTGAAATaGAACAAAGAGAGCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: IAHARDKSTHGYNPDVGPDGAVK*NKESEH Trigger: GTGTTCGCTCTCTTTGTTCCATTTCACTGCTCCATC...GGGTCCTACATCTGGATTGTAGCCATGAGTGGACTTATCTCTGGCATGTGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGAACCTCACACCAGCACTGGATTATCTGTACTGAAAGCAGGAGTTGGGGCAGGATGCGAACTTCCTaGTTCCATATCTTCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRTSHQHWIICTESRSWGRMRTS*FHIFFQ Trigger: TTGAAAGAAGATATGGAAGCAGGAAGTTCGCATCCT...GCCCCAACTCCTGCTTTCAGTACAGATAATCCAGTGCTGGTGTGAGGTTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| 3UTR CAA 72 bp | AGTATCACACACCTAGATTTGCATCAATTTGACACATaGCTGCTCACTGTGCAGAATACACCCGGTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SITHLDLHQFDT*LLTVQNTPGAV Trigger: AACTGCACCGGGTGTATTCTGCACAGTGAGCAGCAATGTGTCAAATTGATGCAAATCTAGGTGTGTGATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CCA 90 bp | GCCGGTCCAGCTGCTCCATCCTCTGCTGTCTCTGGATGTCCACGGTaGCTCCCATCCCAACCCTGGCCTCGCTGGTGGGTTCTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AGPAAPSSAVSGCPR*LPSQPWPRWWVLKM Trigger: CATCTTCAGAACCCACCAGCGAGGCCAGGGTTGGGATGGGAGCCACCGTGGACATCCAGAGACAGCAGAGGATGGAGCAGCTGGACCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS GCA 90 bp | TGGGCTCAAGGGCCCAGGAGAAGAACTCGGCCATTCTGCCAGGGATaGGGAGCACCTGGTGGACCTGGAGCACTTTGCGGTCATAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: WAQGPRRRTRPFCQG*GAPGGPGALCGHST Trigger: TGTGCTATGACCGCAAAGTGCTCCAGGTCCACCAGGTGCTCCGCATCCCTGGCAGAATGGCCGAGTTCTTCTCCTGGGCCCTTGAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CCA 90 bp | GTCTCTGGATGTCCACGGTGGCTCCCATCCCAACCCTGGCCTCGCTaGTGGGTTCTGAAGATGAGAAGATGGGCTCAAGGGCCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSGCPRWLPSQPWPR*WVLKMRRWAQGPRR Trigger: TCTCCTGGGCCCTTGAGCCCATCTTCTCATCTTCAGAACCCACCAGCGAGGCCAGGGTTGGGATGGGAGCCACCGTGGACATCCAGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACGCCACATTGAGGTCATaGTTTGAGGCCCTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASCLHLPDCLHSGHCLTHATLRS*FEALRA Trigger: GGCCCTGAGGGCCTCAAACAATGACCTCAATGTGGC...GTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CCA 90 bp | CCATCCCAACCCTGGCCTCGCTGGTGGGTTCTGAAGATGAGAAGATaGGCTCAAGGGCCCAGGAGAAGAACTCGGCCATTCTGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSQPWPRWWVLKMRR*AQGPRRRTRPFCQG Trigger: TCCCTGGCAGAATGGCCGAGTTCTTCTCCTGGGCCCTTGAGCCCATCTTCTCATCTTCAGAACCCACCAGCGAGGCCAGGGTTGGGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGAATCCAGAAGGTAAGTaGCTGGCCACTGTGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: AQWALPHPLQGARMGPGKNPEGK*LATVTP Trigger: TGGTGTCACAGTGGCCAGCAACTTACCTTCTGGATT...CTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGAAAAGCCGGTTCCAATaGATCATTCCTCCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQWALPHPLQGARMGPGKKSRFQ*IIPPCC Trigger: GCAGCAGGGAGGAATGATCAATTGGAACCGGCTTTT...CTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGGGCACTGCCTCACCCACTACAAGGGGCAAGGATGGGGCCAGGGAAGAAGTTGGTGGCCACATaGAGGTCATTGTTTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQWALPHPLQGARMGPGKKLVAT*RSLFEA Trigger: GGCCTCAAACAATGACCTCAATGTGGCCACCAACTT...CTTCCCTGGCCCCATCCTTGCCCCTTGTAGTGGGTGAGGCAGTGCCCACTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGACTCTAGGCTGGAGGAGGCTCATCTCCAGCTCCCTCTGTCACTGAGATGCTGCAGCAGGAAGTaGGTGGCCACATTGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GADSRLEEAHLQLPLSLRCCSRK*VATLRS Trigger: TGACCTCAATGTGGCCACCAACTTCCTGCTGCAGCA...TCTCAGTGACAGAGGGAGCTGGAGATGAGCCTCCTCCAGCCTAGAGTCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CCA 90 bp | GTTTGTGATGGACAACGGGCCCAGGATCTGCGCCACCTGGACTCTTaGGATGGAGCAGTGAAATGGAACAAAGAGAGCGAACACGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VCDGQRAQDLRHLDS*DGAVKWNKESEHGR Trigger: GCGCCCGTGTTCGCTCTCTTTGTTCCATTTCACTGCTCCATCCCAAGAGTCCAGGTGGCGCAGATCCTGGGCCCGTTGTCCATCACAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTGCTTACACCTCCCTGACTGTCTGCACAGTGGGCACTGCCTCACCCACATCTGCAAGTCGTGCTaGACAGCATGGAGGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: ASCLHLPDCLHSGHCLTHICKSC*TAWRSY Trigger: GTATGACCTCCATGCTGTCAAGCACGACTTGCAGAT...GTGGGTGAGGCAGTGCCCACTGTGCAGACAGTCAGGGAGGTGTAAGCAGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS TCA 90 bp | AACGGGCCCAGGATCTGCGCCACCTGGACTCTTGGGATGGAGCAGTaGAATGGAACAAAGAGAGCGAACACGGGCGCCAAGAATCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NGPRICATWTLGMEQ*NGTKRANTGAKNPE Trigger: TTCTGGATTCTTGGCGCCCGTGTTCGCTCTCTTTGTTCCATTTCACTGCTCCATCCCAAGAGTCCAGGTGGCGCAGATCCTGGGCCCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS GCA 90 bp | CCAATTGATCATTCCTCCCTGCTGCTGCCTTTGACGCCTCACTTGTaGAAACTGAGAGAGCATCAGCTGCCGGTCCAGCTGCTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PIDHSSLLLPLTPHL*KLREHQLPVQLLHP Trigger: AGGATGGAGCAGCTGGACCGGCAGCTGATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAAAGGCAGCAGCAGGGAGGAATGATCAATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS-3UTR CAA 90 bp | GATGCGGAGCACCTGGTGGACCTGGAGCACTTTGCGGTCATAGCACATGCCAGAAATCCAGAAGGTAAGTaGCTGGCCACTGTGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: DAEHLVDLEHFAVIAHARNPEGK*LATVTP Trigger: TGGTGTCACAGTGGCCAGCAACTTACCTTCTGGATT...TCTGGCATGTGCTATGACCGCAAAGTGCTCCAGGTCCACCAGGTGCTCCGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226998.2 |
||
| CDS-3UTR CAA 90 bp | GACAGTCGTCAATTCCTACAGCTGCTCTTGCTCACAGGGGCTGCCTCCTGCTTACCTTTGACGCCTCACTaGTGCAAACTGAGAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DSRQFLQLLLLTGAASCLPLTPH*CKLREH Trigger: ATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAAAGG...TAAGCAGGAGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS TCA 90 bp | AAGCGAATACTGCACGGCTTCCACGAGGATAAAATCAAACAAGGCTaGCAAGACCCAGGAACCCAGCAAGAAGGATGCGAACTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRILHGFHEDKIKQG*QDPGTQQEGCELPA Trigger: AGCAGGAAGTTCGCATCCTTCTTGCTGGGTTCCTGGGTCTTGTCAGCCTTGTTTGATTTTATCCTCGTGGAAGCCGTGCAGTATTCGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS GCA 90 bp | AATCCAGAAGGTAAGTTGCTGGCCACTGTGACACCAAGCGAATACTaGACGGCTTCCACGAGGATAAAATCAAACAAGGCTGACAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: NPEGKLLATVTPSEY*TASTRIKSNKADKT Trigger: GGTCTTGTCAGCCTTGTTTGATTTTATCCTCGTGGAAGCCGTGCAGTATTCGCTTGGTGTCACAGTGGCCAGCAACTTACCTTCTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS GCA 72 bp | TGGGCTCAAGGGCCCAGGAGAAGAACTCGGCCATTCTaGCAGGGATGCGGAGCACCTGGTGGACCTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WAQGPRRRTRPF*QGCGAPGGPGA Trigger: TGCTCCAGGTCCACCAGGTGCTCCGCATCCCTGGCAGAATGGCCGAGTTCTTCTCCTGGGCCCTTGAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CCA 72 bp | GCTGCTCCATCCTCTGCTGTCTCTGGATGTCCACGGTaGCTCCCATCCCAACCCTGGCCTCGCTGGTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAPSSAVSGCPR*LPSQPWPRWWV Trigger: AACCCACCAGCGAGGCCAGGGTTGGGATGGGAGCCACCGTGGACATCCAGAGACAGCAGAGGATGGAGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS GCA 72 bp | GAGAGCATCAGCTGCCGGTCCAGCTGCTCCATCCTCTaGTGTCTCTGGATGTCCACGGTGGCTCCCATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESISCRSSCSIL*CLWMSTVAPIP Trigger: TGGGATGGGAGCCACCGTGGACATCCAGAGACAGCAGAGGATGGAGCAGCTGGACCGGCAGCTGATGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CAA 72 bp | TGCTGCAGCAGGAAGTTGGTGGCCACATTGAGGTCATaGTTTGAGGCCCTCAGGGCCTCCAAGGCGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CCSRKLVATLRS*FEALRASKASP Trigger: AGGGGACGCCTTGGAGGCCCTGAGGGCCTCAAACAATGACCTCAATGTGGCCACCAACTTCCTGCTGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS GCA 72 bp | CATTCCTCCCTGCTGCTGCCTTTGACGCCTCACTTGTaGAAACTGAGAGAGCATCAGCTGCCGGTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSSLLLPLTPHL*KLREHQLPVQL Trigger: CAGCTGGACCGGCAGCTGATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAAAGGCAGCAGCAGGGAGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS TCA 72 bp | AGGATCTGCGCCACCTGGACTCTTGGGATGGAGCAGTaGAATGGAACAAAGAGAGCGAACACGGGCGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RICATWTLGMEQ*NGTKRANTGAK Trigger: CTTGGCGCCCGTGTTCGCTCTCTTTGTTCCATTTCACTGCTCCATCCCAAGAGTCCAGGTGGCGCAGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS CAA 72 bp | GATCATTCCTCCCTGCTGCTGCCTTTGACGCCTCACTaGTGCAAACTGAGAGAGCATCAGCTGCCGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DHSSLLLPLTPH*CKLREHQLPVQ Trigger: CTGGACCGGCAGCTGATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAAAGGCAGCAGCAGGGAGGAATGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CAA 90 bp | GGAACAAAGAGAGCGAACACGGGCGCCAAGAATCCAGAAGGTAAGTaGCTGGCCACTGTGACACCAAGCGAATACTGCACGGCTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GTKRANTGAKNPEGK*LATVTPSEYCTAST Trigger: CGTGGAAGCCGTGCAGTATTCGCTTGGTGTCACAGTGGCCAGCAACTTACCTTCTGGATTCTTGGCGCCCGTGTTCGCTCTCTTTGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS TCA 72 bp | GCGCCAAGAATCCAGAAGGTAAGTTGCTGGCCACTGTaGCACCAAGCGAATACTGCACGGCTTCCACGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: APRIQKVSCWPL*HQANTARLPRG Trigger: TCCTCGTGGAAGCCGTGCAGTATTCGCTTGGTGTCACAGTGGCCAGCAACTTACCTTCTGGATTCTTGGCGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS CAA 72 bp | AGAGCGAACACGGGCGCCAAGAATCCAGAAGGTAAGTaGCTGGCCACTGTGACACCAAGCGAATACTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RANTGAKNPEGK*LATVTPSEYCT Trigger: CGTGCAGTATTCGCTTGGTGTCACAGTGGCCAGCAACTTACCTTCTGGATTCTTGGCGCCCGTGTTCGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039803.7 ENSMUST00000226998.2 |
||
| CDS CAA 90 bp | GTTCCAATTGATCATTCCTCCCTGCTGCTGCCTTTGACGCCTCACTaGTGCAAACTGAGAGAGCATCAGCTGCCGGTCCAGCTGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VPIDHSSLLLPLTPH*CKLREHQLPVQLLH Trigger: ATGGAGCAGCTGGACCGGCAGCTGATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAAAGGCAGCAGCAGGGAGGAATGATCAATTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS CAA 72 bp | CCGGTTCCAATTGATCATTCCTCCCTGCTGCTGCCTTaGACGCCTCACTTGTGCAAACTGAGAGAGCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPIDHSSLLLP*TPHLCKLREHQ Trigger: CTGATGCTCTCTCAGTTTGCACAAGTGAGGCGTCAAAGGCAGCAGCAGGGAGGAATGATCAATTGGAACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||
| CDS TCA 72 bp | TTCCGCATATCAGCCTCCAAATCTGCAAGTCGTGCTTaGCAGCATGGAGGTCATACACGAAGAACTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FRISASKSASRA*QHGGHTRRTSD Trigger: GTCAGAAGTTCTTCGTGTATGACCTCCATGCTGTCAAGCACGACTTGCAGATTTGGAGGCTGATATGCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039803.7 |
||