Pregenerated sensors for UBAC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036352Ensembl transcript IDs: ENSMUST00000036509.14, ENSMUST00000136750.3, ENSMUST00000146363.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAAGGGTCAATTCAAGTAGCACTTCAGGAGCCCAGCAGAGTATCTaGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LRVNSSSTSGAQQSI*RDGQQSFTFPMQQP Trigger: TGGCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGCTGGGCTCCTGAAGTGCTACTTGAATTGACCCTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCAACTTTCAAGCCATGTaGCAGAAGTTGATAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRVSGGTGSNHSPSQCNSNFQAM*QKLISC Trigger: ACAGCTTATCAACTTCTGCCACATGGCTTGAAAGTT...GCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| 3UTR CAA 90 bp | CTTGACATAACACTTTGGATCAGAACATGCCTTCTTTTAAATACATaGGGCTCCACAAGCAAACACCTAAGGGTCAATTCAAGTAGCACT | + |
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Preference number: 2 (lower is better) Translates to: LDITLWIRTCLLLNT*GSTSKHLRVNSSST Trigger: AGTGCTACTTGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTGATCCAAAGTGTTATGTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| 3UTR TCA 72 bp | CCGGCTGAACCCTGTGCCCACTGCCTCACAGACTGCTaGGACTGCACAGCCAAGGAGCACAGTAGGTACCAC | + |
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Preference number: 3 (lower is better) Translates to: PAEPCAHCLTDC*DCTAKEHSRYH Trigger: GTGGTACCTACTGTGCTCCTTGGCTGTGCAGTCTCAGCAGTCTGTGAGGCAGTGGGCACAGGGTTCAGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| 3UTR TCA 72 bp | GAGTCCGAGAAGCTGTGGTCCAGGCAAGATCCCGGCTaGACCCTGTGCCCACTGCCTCACAGACTGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: ESEKLWSRQDPG*TLCPLPHRLLR Trigger: TCTCAGCAGTCTGTGAGGCAGTGGGCACAGGGTTCAGCCGGGATCTTGCCTGGACCACAGCTTCTCGGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| 3UTR CCA 72 bp | AATTCAAGTAGCACTTCAGGAGCCCAGCAGAGTATCTaGAGGGACGGGCAGCAATCATTCACCTTCCCAATG | + |
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Preference number: 3 (lower is better) Translates to: NSSSTSGAQQSI*RDGQQSFTFPM Trigger: CATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGCTGGGCTCCTGAAGTGCTACTTGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| 3UTR GCA 72 bp | ATTAGCACACTTGACATAACACTTTGGATCAGAACATaGCTTCTTTTAAATACATTGGGCTCCACAAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: ISTLDITLWIRT*LLLNTLGSTSK Trigger: TTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTGATCCAAAGTGTTATGTCAAGTGTGCTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | TCAAGTAGCACTTCAGGAGCCCAGCAGAGTATCTGGAGGGACGGGCAGCAATCAGACCGGGCCCGTCTCTaGGTCGTTCATCCACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SSSTSGAQQSIWRDGQQSDRARL*VVHPLG Trigger: ACCCAGTGGATGAACGACCCAGAGACGGGCCCGGTC...TGATTGCTGCCCGTCCCTCCAGATACTCTGCTGGGCTCCTGAAGTGCTACTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR TCA 90 bp | TCAATTCAAGTAGCACTTCAGGAGCCCAGCAGAGTATCTGGAGGGACGGGCAGCCAGCCGAAGGGCCTTTaGGGCTCTGCTCTCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SIQVALQEPSRVSGGTGSQPKGL*GSALRK Trigger: TTTCCTGAGAGCAGAGCCTCAAAGGCCCTTCGGCTG...GCTGCCCGTCCCTCCAGATACTCTGCTGGGCTCCTGAAGTGCTACTTGAATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCAATTCCTCAGGGGATaGCTTCCGGTCCCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QQSIWRDGQQSFTFPMQQQFLRG*LPVPQQ Trigger: CTGCTGGGGGACCGGAAGCCATCCCCTGAGGAATTG...CTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | CAGCAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGGCAGCCGAAGCACCTTaGCCGCGAAGATCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QQSIWRDGQQSFTFPMQQAAEAP*PRRSSP Trigger: AGGAGAAGATCTTCGCGGGCAAGGTGCTTCGGCTGC...CTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | GAAGTTGATAAGCTGTTAGGTCTGGAAAGGAGAGTCCGAGAAGCTGTGGTCCAGTCGGCTGCGCAGATGTaGAGCCGAAGCACCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: EVDKLLGLERRVREAVVQSAAQM*SRSTLP Trigger: GGGCAAGGTGCTTCGGCTGCACATCTGCGCAGCCGA...CTGGACCACAGCTTCTCGGACTCTCCTTTCCAGACCTAACAGCTTATCAACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR TCA 90 bp | CTTTCTGTAGACACCTGTCAGAAGCTAGGACTGCAACTTTCAAGCCATGTGGCAGCACTGGCCCCTGCTTaGGCAGCATGGCCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LSVDTCQKLGLQLSSHVAALAPA*AAWPGR Trigger: TCTTCCAGGCCATGCTGCTCAAGCAGGGGCCAGTGC...TGCCACATGGCTTGAAAGTTGCAGTCCTAGCTTCTGACAGGTGTCTACAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | CAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCCATCTGGAAGTCTCTCATaGTGGTCTGGACAGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QSIWRDGQQSFTFPMQQPSGSLS*WSGQQS Trigger: GGACTGCTGTCCAGACCACCATGAGAGACTTCCAGA...TGGCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | AGCAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCGGGTCGTTCATCCACTaGGTGCTGTTAAGCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: SRVSGGTGSNHSPSQCNSGSFIH*VLLSGF Trigger: GAATCCGCTTAACAGCACCCAGTGGATGAACGACCC...GCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR TCA 90 bp | CTTTCTGTAGACACCTGTCAGAAGCTAGGACTGCAACTTTCAAGCCATGTGGCAAGCCACTCCATGGCCTaGGGCACTGACATGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSVDTCQKLGLQLSSHVASHSMA*GTDMWF Trigger: GAACCACATGTCAGTGCCTCAGGCCATGGAGTGGCT...TGCCACATGGCTTGAAAGTTGCAGTCCTAGCTTCTGACAGGTGTCTACAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | CTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTCAATTCAAGTAGCCTCGGCGCCGTCGGCTaGGCAGATGTGCAGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLNTLGSTSKHLRVNSSSLGAVG*ADVQPK Trigger: CTTCGGCTGCACATCTGCGCAGCCGACGGCGCCGAG...GCTACTTGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR TCA 90 bp | ATTCAAGTAGCACTTCAGGAGCCCAGCAGAGTATCTGGAGGGACGGGCAGCAATCTTCTTTTCTTCTGCTaGGACGTCAGCCATCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: IQVALQEPSRVSGGTGSNLLFFC*DVSHLR Trigger: CCTAAGATGGCTGACGTCTCAGCAGAAGAAAAGAAG...ATTGCTGCCCGTCCCTCCAGATACTCTGCTGGGCTCCTGAAGTGCTACTTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | ACAAGCAAACACCTAAGGGTCAATTCAAGTAGCACTTCAGGAGCCCAGCAGAGTGGGCCTTTGAGGCTCTaGTCTCAGGAAAGCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: TSKHLRVNSSSTSGAQQSGPLRL*SQESPS Trigger: AGATGGGCTTTCCTGAGAGCAGAGCCTCAAAGGCCC...ACTCTGCTGGGCTCCTGAAGTGCTACTTGAATTGACCCTTAGGTGTTTGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | GCAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCCAGCCATCTTAGGGAGTaGAGAAGGAACACGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: AEYLEGRAAIIHLPNATASHLRE*RRNTLF Trigger: AAAAAGCGTGTTCCTTCTCCACTCCCTAAGATGGCT...GGCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | ACAAGCAAACACCTAAGGGTCAATTCAAGTAGCACTTCAGGAGCCCAGCAGAGTCAAGCAGCGTTCTGCTaGTTGTTGTTCACTCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TSKHLRVNSSSTSGAQQSQAAFC*LLFTRR Trigger: CCTCCGAGTGAACAACAACCAGCAGAACGCTGCTTG...ACTCTGCTGGGCTCCTGAAGTGCTACTTGAATTGACCCTTAGGTGTTTGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | AATACATTGGGCTCCACAAGCAAACACCTAAGGGTCAATTCAAGTAGCACTTCAACCCAGCTGCACCACTaGGTTGTCCAGGATGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NTLGSTSKHLRVNSSSTSTQLHH*VVQDGL Trigger: CAGGCCATCCTGGACAACCCAGTGGTGCAGCTGGGT...TGAAGTGCTACTTGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR TCA 90 bp | AATACATTGGGCTCCACAAGCAAACACCTAAGGGTCAATTCAAGTAGCACTTCAGAAAGCCCATCTCTGTaGGCTGCCGCAAGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: NTLGSTSKHLRVNSSSTSESPSL*AAARQS Trigger: AGACTGCCTTGCGGCAGCTCACAGAGATGGGCTTTC...TGAAGTGCTACTTGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | CTTTCTGTAGACACCTGTCAGAAGCTAGGACTGCAACTTTCAAGCCATGTGGCATTCCGGAGTTCTGTCTaGAAGTCTCTCATGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSVDTCQKLGLQLSSHVAFRSSV*KSLMVV Trigger: GACCACCATGAGAGACTTCCAGACAGAACTCCGGAA...TGCCACATGGCTTGAAAGTTGCAGTCCTAGCTTCTGACAGGTGTCTACAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | GCAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCCTTGTCTGGAGCCTTTTaGTCTTGTTTCTTCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: AEYLEGRAAIIHLPNATALSGAF*SCFFFS Trigger: AGAAAAGAAGAAACAAGAGCAAAAGGCTCCAGACAA...GGCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | AGAACATGCCTTCTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTCGGAAGTCTCTCATGGTaGTCTGGACAGCAGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: RTCLLLNTLGSTSKHLRVGSLSW*SGQQSG Trigger: ACCGGACTGCTGTCCAGACCACCATGAGAGACTTCC...GACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | GATCAGAACATGCCTTCTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTGGGTCACATTCTTaGGGTCTTCTAGGCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: DQNMPSFKYIGLHKQTPKGGSHS*GLLGSH Trigger: ATGGGAGCCTAGAAGACCCCAAGAATGTGACCCACC...CTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | CAGAACATGCCTTCTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTGTGCGATTCAGCGTCTaGAAGATCCTAGAGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: QNMPSFKYIGLHKQTPKGVRFSV*KILEIC Trigger: GCAGATCTCTAGGATCTTCCAGACGCTGAATCGCAC...ACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | CTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTCAATTCAAGTAGCCAATTAGCCACTCCATaGCCTGAGGCACTGACATGT | + |
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Preference number: 4 (lower is better) Translates to: LLNTLGSTSKHLRVNSSSQLATP*PEALTC Trigger: ACATGTCAGTGCCTCAGGCCATGGAGTGGCTAATTG...GCTACTTGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | TTGGATCAGAACATGCCTTCTTTTAAATACATTGGGCTCCACAAGCAAACACCTCTTCCAAGATCGTTTTaGTGTCACTCAGCACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LDQNMPSFKYIGLHKQTPLPRSF*CHSAPS Trigger: AGAGGGTGCTGAGTGACAGCAAAACGATCTTGGAAG...AGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTGATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | TTGGATCAGAACATGCCTTCTTTTAAATACATTGGGCTCCACAAGCAAACACCTGACAGCCCGAGCATCTaGTCGAAATTCCTTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LDQNMPSFKYIGLHKQTPDSPSI*SKFLFP Trigger: AGGAAAAAGGAATTTCGAGCAGATGCTCGGGCTGTC...AGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTGATCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CCA 90 bp | AGAACATGCCTTCTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTCTGTATTAGCTTGTGGTaGGTCACATTCTTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RTCLLLNTLGSTSKHLRVCISLW*VTFLGS Trigger: AGACCCCAAGAATGTGACCCACCACAAGCTAATACA...GACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| 3UTR CAA 72 bp | ACACTTTGGATCAGAACATGCCTTCTTTTAAATACATaGGGCTCCACAAGCAAACACCTAAGGGTCAATTCA | + |
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Preference number: 4 (lower is better) Translates to: TLWIRTCLLLNT*GSTSKHLRVNS Trigger: TGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTGATCCAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR GCA 90 bp | CTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTCAATTCAAGTAGCATCCAGCATAGCATTTaGCTTCTTAAACAATTCAAC | + |
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Preference number: 4 (lower is better) Translates to: LLNTLGSTSKHLRVNSSSIQHSI*LLKQFN Trigger: GTTGAATTGTTTAAGAAGGCAAATGCTATGCTGGAT...GCTACTTGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS GCA 90 bp | TCGGTCGCCTCCTCCAGCCACTCGGCGCCGTCGGCTGCGCAGATGTaGAGCCGAAGCACCTTGCCCGCGAAGATCTTCTCCTCCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: SVASSSHSAPSAAQM*SRSTLPAKIFSSCT Trigger: CGTGCAGGAGGAGAAGATCTTCGCGGGCAAGGTGCTTCGGCTGCACATCTGCGCAGCCGACGGCGCCGAGTGGCTGGAGGAGGCGACCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS GCA 90 bp | CGATGTGTCCTCGGTCGCCTCCTCCAGCCACTCGGCGCCGTCGGCTaGGCAGATGTGCAGCCGAAGCACCTTGCCCGCGAAGATCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RCVLGRLLQPLGAVG*ADVQPKHLAREDLL Trigger: GAGAAGATCTTCGCGGGCAAGGTGCTTCGGCTGCACATCTGCGCAGCCGACGGCGCCGAGTGGCTGGAGGAGGCGACCGAGGACACATCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS-3UTR CAA 90 bp | TCCCGGCTGAACCCTGTGCCCACTGCCTCACAGACTGCTGAGACTGCACAGCCAGCAGCGTTCTGCTGGTaGTTGTTCACTCGGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SRLNPVPTASQTAETAQPAAFCW*LFTRRA Trigger: TGCCCTCCGAGTGAACAACAACCAGCAGAACGCTGC...TGGCTGTGCAGTCTCAGCAGTCTGTGAGGCAGTGGGCACAGGGTTCAGCCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS GCA 90 bp | ACTAGTTCCCACAGCAGCTTCAGAGGAGGTGGAGGAGGTAGTGGCTaGAGCACTGGCCCCTGCTTGAGCAGCATGGCCTGGAAGAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: TSSHSSFRGGGGGSG*STGPCLSSMAWKRC Trigger: ACACCTCTTCCAGGCCATGCTGCTCAAGCAGGGGCCAGTGCTGCAGCCACTACCTCCTCCACCTCCTCTGAAGCTGCTGTGGGAACTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS CCA 90 bp | GAGAGGGCTATTGGGATCGATGCCCTGGTCCAATTCCTCAGGGGATaGCTTCCGGTCCCCCAGCAGCCATTCACAAGCAGCGTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ERAIGIDALVQFLRG*LPVPQQPFTSSVLL Trigger: CAGCAGAACGCTGCTTGTGAATGGCTGCTGGGGGACCGGAAGCCATCCCCTGAGGAATTGGACCAGGGCATCGATCCCAATAGCCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS GCA 90 bp | AGCTTCAGAGGAGGTGGAGGAGGTAGTGGCTGCAGCACTGGCCCCTaGTTGAGCAGCATGGCCTGGAAGAGGTGTGTCAATAGCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: SFRGGGGGSGCSTGP*LSSMAWKRCVNSWI Trigger: GATCCAGCTATTGACACACCTCTTCCAGGCCATGCTGCTCAAGCAGGGGCCAGTGCTGCAGCCACTACCTCCTCCACCTCCTCTGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS TCA 90 bp | GCCGAAGGGCCTTTGAGGCTCTGCTCTCAGGAAAGCCCATCTCTGTaGGCTGCCGCAAGGCAGTCTCATCCACTCGCTCATCCTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: AEGPLRLCSQESPSL*AAARQSHPLAHPHL Trigger: AAGATGAGGATGAGCGAGTGGATGAGACTGCCTTGCGGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAGCCTCAAAGGCCCTTCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS TCA 90 bp | TCAGAGGAGGTGGAGGAGGTAGTGGCTGCAGCACTGGCCCCTGCTTaGGCAGCATGGCCTGGAAGAGGTGTGTCAATAGCTGGATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SEEVEEVVAAALAPA*AAWPGRGVSIAGSS Trigger: AGAAGATCCAGCTATTGACACACCTCTTCCAGGCCATGCTGCTCAAGCAGGGGCCAGTGCTGCAGCCACTACCTCCTCCACCTCCTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS CCA 90 bp | ACGAGGATCTTCCGGAGTTCTGTCTGGAAGTCTCTCATGGTGGTCTaGACAGCAGTCCGGTCAGTGCTGCAGGCAGGCAGGTTTGCCGTT | + |
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Preference number: 5 (lower is better) Translates to: TRIFRSSVWKSLMVV*TAVRSVLQAGRFAV Trigger: AACGGCAAACCTGCCTGCCTGCAGCACTGACCGGACTGCTGTCCAGACCACCATGAGAGACTTCCAGACAGAACTCCGGAAGATCCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS CCA 90 bp | GAGACACGAGGATCTTCCGGAGTTCTGTCTGGAAGTCTCTCATGGTaGTCTGGACAGCAGTCCGGTCAGTGCTGCAGGCAGGCAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: ETRGSSGVLSGSLSW*SGQQSGQCCRQAGL Trigger: CAAACCTGCCTGCCTGCAGCACTGACCGGACTGCTGTCCAGACCACCATGAGAGACTTCCAGACAGAACTCCGGAAGATCCTCGTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS GCA 90 bp | GGTGGTCTGGACAGCAGTCCGGTCAGTGCTGCAGGCAGGCAGGTTTaGCGTTGCTCGAAGAATAGCATCTTTGTCTGGAGCCTTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: GGLDSSPVSAAGRQV*RCSKNSIFVWSLLL Trigger: GAGCAAAAGGCTCCAGACAAAGATGCTATTCTTCGAGCAACGGCAAACCTGCCTGCCTGCAGCACTGACCGGACTGCTGTCCAGACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS CCA 90 bp | CGTCTGGAAGATCCTAGAGATCTGCAGCATGACCGGGCCCGTCTCTaGGTCGTTCATCCACTGGGTGCTGTTAAGCGGATTCTCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: RLEDPRDLQHDRARL*VVHPLGAVKRILQH Trigger: ATGCTGGAGAATCCGCTTAACAGCACCCAGTGGATGAACGACCCAGAGACGGGCCCGGTCATGCTGCAGATCTCTAGGATCTTCCAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CCA 90 bp | GAGATCTGCAGCATGACCGGGCCCGTCTCTGGGTCGTTCATCCACTaGGTGCTGTTAAGCGGATTCTCCAGCATGTCTTCAAATGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: EICSMTGPVSGSFIH*VLLSGFSSMSSNAS Trigger: GCTAGCATTTGAAGACATGCTGGAGAATCCGCTTAACAGCACCCAGTGGATGAACGACCCAGAGACGGGCCCGGTCATGCTGCAGATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CAA 90 bp | CAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCCATCAGCCGAAGGGCCTTaGAGGCTCTGCTCTCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: QSIWRDGQQSFTFPMQQPSAEGP*RLCSQE Trigger: TTCCTGAGAGCAGAGCCTCAAAGGCCCTTCGGCTGA...TGGCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CAA 90 bp | TCAAGTAGCACTTCAGGAGCCCAGCAGAGTATCTGGAGGGACGGGCAGCAATCAGCGTTCTGCTGGTTGTaGTTCACTCGGAGGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: SSSTSGAQQSIWRDGQQSAFCWL*FTRRAS Trigger: TGATGCCCTCCGAGTGAACAACAACCAGCAGAACGC...TGATTGCTGCCCGTCCCTCCAGATACTCTGCTGGGCTCCTGAAGTGCTACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS GCA 90 bp | CTGGACAGCAGTCCGGTCAGTGCTGCAGGCAGGCAGGTTTGCCGTTaGTCGAAGAATAGCATCTTTGTCTGGAGCCTTTTGCTCTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LDSSPVSAAGRQVCR*SKNSIFVWSLLLLF Trigger: AAACAAGAGCAAAAGGCTCCAGACAAAGATGCTATTCTTCGAGCAACGGCAAACCTGCCTGCCTGCAGCACTGACCGGACTGCTGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS TCA 90 bp | CAACTGCATCGGGATTCAGTGCTAACAGCTTCTGTGCCACCTCAATaGGAGACACGAGGATCTTCCGGAGTTCTGTCTGGAAGTCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: QLHRDSVLTASVPPQ*ETRGSSGVLSGSLS Trigger: TGAGAGACTTCCAGACAGAACTCCGGAAGATCCTCGTGTCTCTCATTGAGGTGGCACAGAAGCTGTTAGCACTGAATCCCGATGCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS-3UTR CAA 90 bp | CAGAACATGCCTTCTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTTGCAGCCGAAGCACCTaGCCCGCGAAGATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QNMPSFKYIGLHKQTPKGCSRST*PAKIFS Trigger: GGAGAAGATCTTCGCGGGCAAGGTGCTTCGGCTGCA...ACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAGAAGGCATGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CAA 90 bp | CTTTTAAATACATTGGGCTCCACAAGCAAACACCTAAGGGTCAATTCAAGTAGCAGCACTGGCCCCTGCTaGAGCAGCATGGCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLNTLGSTSKHLRVNSSSSTGPC*SSMAWK Trigger: CTTCCAGGCCATGCTGCTCAAGCAGGGGCCAGTGCT...GCTACTTGAATTGACCCTTAGGTGTTTGCTTGTGGAGCCCAATGTATTTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CAA 90 bp | CTTTCTGTAGACACCTGTCAGAAGCTAGGACTGCAACTTTCAAGCCATGTGGCATCTTCCAAGATCGTTTaGCTGTCACTCAGCACCCTC | + |
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Preference number: 5 (lower is better) Translates to: LSVDTCQKLGLQLSSHVASSKIV*LSLSTL Trigger: GAGGGTGCTGAGTGACAGCAAAACGATCTTGGAAGA...TGCCACATGGCTTGAAAGTTGCAGTCCTAGCTTCTGACAGGTGTCTACAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS-3UTR CAA 90 bp | AGCAGAGTATCTGGAGGGACGGGCAGCAATCATTCACCTTCCCAATGCAACAGCTTCCTGCGTATCTTCTaGAAGATTTCTGTGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SRVSGGTGSNHSPSQCNSFLRIF*KISVSS Trigger: TGAGCTCACAGAAATCTTCAAGAAGATACGCAGGAA...GCTGTTGCATTGGGAAGGTGAATGATTGCTGCCCGTCCCTCCAGATACTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS TCA 90 bp | CATCAATCACTTCCTTCTCGTCAAAGCCCATCTCCATCAGCGAAATaGCAGCCCGAGCATCTGCTCGAAATTCCTTTTTCCTGCGTATCT | + |
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Preference number: 5 (lower is better) Translates to: HQSLPSRQSPSPSAK*QPEHLLEIPFSCVS Trigger: AGATACGCAGGAAAAAGGAATTTCGAGCAGATGCTCGGGCTGTCATTTCGCTGATGGAGATGGGCTTTGACGAGAAGGAAGTGATTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS CCA 90 bp | GCAGGCAGGCAGGTTTGCCGTTGCTCGAAGAATAGCATCTTTGTCTaGAGCCTTTTGCTCTTGTTTCTTATGTTTGAGGCAACTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: AGRQVCRCSKNSIFV*SLLLLFLMFEATLL Trigger: AAGGAGAGTTGCCTCAAACATAAGAAACAAGAGCAAAAGGCTCCAGACAAAGATGCTATTCTTCGAGCAACGGCAAACCTGCCTGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136750.3 |
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| CDS GCA 90 bp | ATAACAAGACGTCTTGGTCCTGGATGTTTTCTTCCAAGATCGTTTTaGTGTCACTCAGCACCCTCTCTGAAGCAGCATGTATTAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: ITRRLGPGCFLPRSF*CHSAPSLKQHVLAC Trigger: ACAAGCTAATACATGCTGCTTCAGAGAGGGTGCTGAGTGACAGCAAAACGATCTTGGAAGAAAACATCCAGGACCAAGACGTCTTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS GCA 72 bp | CTCGGTCGCCTCCTCCAGCCACTCGGCGCCGTCGGCTaGGCAGATGTGCAGCCGAAGCACCTTGCCCGCGAA | + |
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Preference number: 6 (lower is better) Translates to: LGRLLQPLGAVG*ADVQPKHLARE Trigger: TTCGCGGGCAAGGTGCTTCGGCTGCACATCTGCGCAGCCGACGGCGCCGAGTGGCTGGAGGAGGCGACCGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS GCA 72 bp | TCCTCCAGCCACTCGGCGCCGTCGGCTGCGCAGATGTaGAGCCGAAGCACCTTGCCCGCGAAGATCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSHSAPSAAQM*SRSTLPAKIFS Trigger: GGAGAAGATCTTCGCGGGCAAGGTGCTTCGGCTGCACATCTGCGCAGCCGACGGCGCCGAGTGGCTGGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS GCA 72 bp | CACAGCAGCTTCAGAGGAGGTGGAGGAGGTAGTGGCTaGAGCACTGGCCCCTGCTTGAGCAGCATGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HSSFRGGGGGSG*STGPCLSSMAW Trigger: CCAGGCCATGCTGCTCAAGCAGGGGCCAGTGCTGCAGCCACTACCTCCTCCACCTCCTCTGAAGCTGCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS CCA 72 bp | TTCCGGAGTTCTGTCTGGAAGTCTCTCATGGTGGTCTaGACAGCAGTCCGGTCAGTGCTGCAGGCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: FRSSVWKSLMVV*TAVRSVLQAGR Trigger: CCTGCCTGCCTGCAGCACTGACCGGACTGCTGTCCAGACCACCATGAGAGACTTCCAGACAGAACTCCGGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS CCA 72 bp | ATTGGGATCGATGCCCTGGTCCAATTCCTCAGGGGATaGCTTCCGGTCCCCCAGCAGCCATTCACAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IGIDALVQFLRG*LPVPQQPFTSS Trigger: GCTGCTTGTGAATGGCTGCTGGGGGACCGGAAGCCATCCCCTGAGGAATTGGACCAGGGCATCGATCCCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS GCA 72 bp | GAGGCTCTGCTCTCAGGAAAGCCCATCTCTGTGAGCTaGCGCAAGGCAGTCTCATCCACTCGCTCATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: EALLSGKPISVS*RKAVSSTRSSS Trigger: TGAGGATGAGCGAGTGGATGAGACTGCCTTGCGGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS CCA 72 bp | GGATCTTCCGGAGTTCTGTCTGGAAGTCTCTCATGGTaGTCTGGACAGCAGTCCGGTCAGTGCTGCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GSSGVLSGSLSW*SGQQSGQCCRQ Trigger: CTGCCTGCAGCACTGACCGGACTGCTGTCCAGACCACCATGAGAGACTTCCAGACAGAACTCCGGAAGATCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS TCA 72 bp | CCTTTGAGGCTCTGCTCTCAGGAAAGCCCATCTCTGTaGGCTGCCGCAAGGCAGTCTCATCCACTCGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PLRLCSQESPSL*AAARQSHPLAH Trigger: ATGAGCGAGTGGATGAGACTGCCTTGCGGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAGCCTCAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 |
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| CDS GCA 72 bp | TACGTGCGATTCAGCGTCTGGAAGATCCTAGAGATCTaGAGCATGACCGGGCCCGTCTCTGGGTCGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: YVRFSVWKILEI*SMTGPVSGSFI Trigger: GATGAACGACCCAGAGACGGGCCCGGTCATGCTGCAGATCTCTAGGATCTTCCAGACGCTGAATCGCACGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CCA 72 bp | CGGTCCCCCAGCAGCCATTCACAAGCAGCGTTCTGCTaGTTGTTGTTCACTCGGAGGGCATCAATCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSPSSHSQAAFC*LLFTRRASITS Trigger: GGAAGTGATTGATGCCCTCCGAGTGAACAACAACCAGCAGAACGCTGCTTGTGAATGGCTGCTGGGGGACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000146363.8 |
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| CDS CCA 72 bp | AGCATGACCGGGCCCGTCTCTGGGTCGTTCATCCACTaGGTGCTGTTAAGCGGATTCTCCAGCATGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SMTGPVSGSFIH*VLLSGFSSMSS Trigger: TGAAGACATGCTGGAGAATCCGCTTAACAGCACCCAGTGGATGAACGACCCAGAGACGGGCCCGGTCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CCA 72 bp | GATCCTAGAGATCTGCAGCATGACCGGGCCCGTCTCTaGGTCGTTCATCCACTGGGTGCTGTTAAGCGGATT | + |
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Preference number: 6 (lower is better) Translates to: DPRDLQHDRARL*VVHPLGAVKRI Trigger: AATCCGCTTAACAGCACCCAGTGGATGAACGACCCAGAGACGGGCCCGGTCATGCTGCAGATCTCTAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CAA 90 bp | TTCCGGTCCCCCAGCAGCCATTCACAAGCAGCGTTCTGCTGGTTGTaGTTCACTCGGAGGGCATCAATCACTTCCTTCTCGTCAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FRSPSSHSQAAFCWL*FTRRASITSFSSKP Trigger: GGGCTTTGACGAGAAGGAAGTGATTGATGCCCTCCGAGTGAACAACAACCAGCAGAACGCTGCTTGTGAATGGCTGCTGGGGGACCGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000146363.8 |
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| CDS GCA 72 bp | AGTCCGGTCAGTGCTGCAGGCAGGCAGGTTTGCCGTTaGTCGAAGAATAGCATCTTTGTCTGGAGCCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SPVSAAGRQVCR*SKNSIFVWSLL Trigger: CAAAAGGCTCCAGACAAAGATGCTATTCTTCGAGCAACGGCAAACCTGCCTGCCTGCAGCACTGACCGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS CAA 72 bp | CCCAGCAGCCATTCACAAGCAGCGTTCTGCTGGTTGTaGTTCACTCGGAGGGCATCAATCACTTCCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: PSSHSQAAFCWL*FTRRASITSFS Trigger: CGAGAAGGAAGTGATTGATGCCCTCCGAGTGAACAACAACCAGCAGAACGCTGCTTGTGAATGGCTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000146363.8 |
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| CDS CAA 72 bp | TCCCCCAGCAGCCATTCACAAGCAGCGTTCTGCTGGTaGTTGTTCACTCGGAGGGCATCAATCACTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPSSHSQAAFCW*LFTRRASITSF Trigger: GAAGGAAGTGATTGATGCCCTCCGAGTGAACAACAACCAGCAGAACGCTGCTTGTGAATGGCTGCTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000146363.8 |
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| CDS CAA 90 bp | TCTGGAGCCTTTTGCTCTTGTTTCTTATGTTTGAGGCAACTCTCCTaGAGCTTCTCCACCGATGTGTCCTCGGTCGCCTCCTCCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SGAFCSCFLCLRQLS*SFSTDVSSVASSSH Trigger: GTGGCTGGAGGAGGCGACCGAGGACACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATAAGAAACAAGAGCAAAAGGCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136750.3 |
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| CDS TCA 72 bp | CGGGATTCAGTGCTAACAGCTTCTGTGCCACCTCAATaGGAGACACGAGGATCTTCCGGAGTTCTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RDSVLTASVPPQ*ETRGSSGVLSG Trigger: TCCAGACAGAACTCCGGAAGATCCTCGTGTCTCTCATTGAGGTGGCACAGAAGCTGTTAGCACTGAATCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS CCA 72 bp | CTCAGCACCCTCTCTGAAGCAGCATGTATTAGCTTGTaGTGGGTCACATTCTTGGGGTCTTCTAGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSTLSEAACISL*WVTFLGSSRLP Trigger: TGGGAGCCTAGAAGACCCCAAGAATGTGACCCACCACAAGCTAATACATGCTGCTTCAGAGAGGGTGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CAA 72 bp | TCACTCAGCACCCTCTCTGAAGCAGCATGTATTAGCTaGTGGTGGGTCACATTCTTGGGGTCTTCTAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLSTLSEAACIS*WWVTFLGSSRL Trigger: GAGCCTAGAAGACCCCAAGAATGTGACCCACCACAAGCTAATACATGCTGCTTCAGAGAGGGTGCTGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS TCA 72 bp | CTTCCTTCTCGTCAAAGCCCATCTCCATCAGCGAAATaGCAGCCCGAGCATCTGCTCGAAATTCCTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LPSRQSPSPSAK*QPEHLLEIPFS Trigger: GGAAAAAGGAATTTCGAGCAGATGCTCGGGCTGTCATTTCGCTGATGGAGATGGGCTTTGACGAGAAGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036509.14 ENSMUST00000136750.3 ENSMUST00000146363.8 |
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| CDS GCA 72 bp | CGTCTTGGTCCTGGATGTTTTCTTCCAAGATCGTTTTaGTGTCACTCAGCACCCTCTCTGAAGCAGCATGTA | + |
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Preference number: 6 (lower is better) Translates to: RLGPGCFLPRSF*CHSAPSLKQHV Trigger: TACATGCTGCTTCAGAGAGGGTGCTGAGTGACAGCAAAACGATCTTGGAAGAAAACATCCAGGACCAAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CAA 72 bp | ACGTCTTGGTCCTGGATGTTTTCTTCCAAGATCGTTTaGCTGTCACTCAGCACCCTCTCTGAAGCAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: TSWSWMFSSKIV*LSLSTLSEAAC Trigger: ACATGCTGCTTCAGAGAGGGTGCTGAGTGACAGCAAAACGATCTTGGAAGAAAACATCCAGGACCAAGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CAA 72 bp | GCAGGCAGGTTTGCCGTTGCTCGAAGAATAGCATCTTaGTCTGGAGCCTTTTGCTCTTGTTTCTTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AGRFAVARRIAS*SGAFCSCFFFS Trigger: AGAAAAGAAGAAACAAGAGCAAAAGGCTCCAGACAAAGATGCTATTCTTCGAGCAACGGCAAACCTGCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036509.14 ENSMUST00000146363.8 |
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| CDS CAA 90 bp | AATAACAAGACGTCTTGGTCCTGGATGTTTTCTTCCAAGATCGTTTaGCTGTCACTCAGCACCCTCTCTGAAGCAGCATGTATTAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: NNKTSWSWMFSSKIV*LSLSTLSEAACISL Trigger: CAAGCTAATACATGCTGCTTCAGAGAGGGTGCTGAGTGACAGCAAAACGATCTTGGAAGAAAACATCCAGGACCAAGACGTCTTGTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036509.14 |
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| CDS CAA 72 bp | TCGAAGAATAGCATCTTTGTCTGGAGCCTTTTGCTCTaGTTTCTTATGTTTGAGGCAACTCTCCTTGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SKNSIFVWSLLL*FLMFEATLLEL Trigger: AAGCTCAAGGAGAGTTGCCTCAAACATAAGAAACAAGAGCAAAAGGCTCCAGACAAAGATGCTATTCTTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136750.3 |
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