Pregenerated sensors for UBA52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090137Ensembl transcript IDs: ENSMUST00000081940.11, ENSMUST00000125184.8, ENSMUST00000129909.8, ENSMUST00000140679.8
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTGCTCCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTCTTGCGGCAGTTGACTaGACGAGGGTGCAGGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQWMEGDFIWSRGHMPGLAAVD*TRVQAC Trigger: GCACGCCTGCACCCTCGTGCAGTCAACTGCCGCAAG...ACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTGAAGGGATGGCTCAATaGTGCCACCGCGCAGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLQWMEGDFIWSRGHMPGEGMAQ*CHRADA Trigger: TGCGTCTGCGCGGTGGCATCATTGAGCCATCCCTTC...ACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGACGAGGGTGCAGGCGTaGGTAGCACTTGCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TAPVDGRGLYLVPGSHARTRVQA*VALAAD Trigger: ATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGT...CCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTATGACGAAGGGATGGCTCAATaGTGCCACCGCGCAGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVDGRGLYLVPGSHARYDEGMAQ*CHRADA Trigger: TGCGTCTGCGCGGTGGCATCATTGAGCCATCCCTTC...GTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTAGAAGGGATGGCTCAATaGTGCCACCGCGCAGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSGWKGTLFGPGVTCQVEGMAQ*CHRADA Trigger: TGCGTCTGCGCGGTGGCATCATTGAGCCATCCCTTC...TACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTAACGAGGGTGCAGGCGTaGGTAGCACTTGCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSGWKGTLFGPGVTCQVTRVQA*VALAAD Trigger: ATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGT...TACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTATGACCACGAGGGTGCAGGCGTaGGTAGCACTTGCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWMEGDFIWSRGHMPGMTTRVQA*VALAAD Trigger: ATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGT...GGTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTATGACACGAGGGTGCAGGCGTaGGTAGCACTTGCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVDGRGLYLVPGSHARYDTRVQA*VALAAD Trigger: ATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGT...GTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCCAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTATACTTCTGGGCAAGCTaGCGAAGGGATGGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CSSGWKGTLFGPGVTCQVYFWAS*RRDGSM Trigger: CATTGAGCCATCCCTTCGTCAGCTTGCCCAGAAGTA...TACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGGATGGAAGGGGACTTTATTTGGTCCCGGGGTCACATGCCAGGTATGACCTACTTCTGGGCAAGCTaGCGAAGGGATGGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QWMEGDFIWSRGHMPGMTYFWAS*RRDGSM Trigger: CATTGAGCCATCCCTTCGTCAGCTTGCCCAGAAGTA...GGTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000081940.11 ENSMUST00000125184.8 ENSMUST00000129909.8 ENSMUST00000140679.8 |
||