Pregenerated sensors for UBA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032557Ensembl transcript IDs: ENSMUST00000035166.12, ENSMUST00000140768.3, ENSMUST00000144195.3, ENSMUST00000214222.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACACCAGCTCAATGCCCCACTCGTTGTCCTCATGAACCACCTCTaGCTCCTCCTGGGGCTCAGCCTCCTGCGTGGGCAGTGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RHQLNAPLVVLMNHL*LLLGLSLLRGQCCC Trigger: GCAGCAGCACTGCCCACGCAGGAGGCTGAGCCCCAGGAGGAGGCAGAGGTGGTTCATGAGGACAACGAGTGGGGCATTGAGCTGGTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR CCA 90 bp | GGTGGCGCACACGCGAAGCAAGCCGACTCTCCAGGGATCATCAGCTaGATGTGCCCGGAAACTGCATTTTCACTGACCCCAGATTCCATC | + |
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Preference number: 1 (lower is better) Translates to: GGAHAKQADSPGIIS*MCPETAFSLTPDSI Trigger: GATGGAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTTCGCGTGTGCGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR GCA 90 bp | TCAGCCACAGCCACCAGGCCACACAGTCAGTCCATCCTCCATTTGTaGTATTTATCGTCCAGAGCCGTAGGCCACAGACACGGATGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SATATRPHSQSILHL*YLSSRAVGHRHGWD Trigger: ATCCCATCCGTGTCTGTGGCCTACGGCTCTGGACGATAAATAGCACAAATGGAGGATGGACTGACTGTGTGGCCTGGTGGCTGTGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR GCA 90 bp | GCACACGCGAAGCAAGCCGACTCTCCAGGGATCATCAGCTGGATGTaGCCGGAAACTGCATTTTCACTGACCCCAGATTCCATCCATGTC | + |
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Preference number: 1 (lower is better) Translates to: AHAKQADSPGIISWM*PETAFSLTPDSIHV Trigger: GACATGGATGGAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTTCGCGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR TCA 90 bp | TTCCTCAGGGTGTGTTCTGCTGCGTGGACCTTACTCAGTCCTGCTTaGTATGGCTGGAAGAAAAGCCGATTCATGTTGGCCAGCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: FLRVCSAAWTLLSPA*YGWKKSRFMLASST Trigger: GGTGGAGCTGGCCAACATGAATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR TCA 90 bp | CCCTTGCAGGGAATAAATACCTGTGCACCTCTGCAGAGGCAGGTTTaGGTTGTTTTGCCCACCACTCAGACAAGCCTTGCTAGCATGTCA | + |
|
Preference number: 1 (lower is better) Translates to: PLQGINTCAPLQRQV*VVLPTTQTSLASMS Trigger: TGACATGCTAGCAAGGCTTGTCTGAGTGGTGGGCAAAACAACTCAAACCTGCCTCTGCAGAGGTGCACAGGTATTTATTCCCTGCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR GCA 90 bp | AATGTTCCTCAGGGTGTGTTCTGCTGCGTGGACCTTACTCAGTCCTaGTTGATATGGCTGGAAGAAAAGCCGATTCATGTTGGCCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: NVPQGVFCCVDLTQS*LIWLEEKPIHVGQL Trigger: GAGCTGGCCAACATGAATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGGAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR TCA 90 bp | CTCCAGGGATCATCAGCTGGATGTGCCCGGAAACTGCATTTTCACTaGCCCCAGATTCCATCCATGTCTGACCAAGTTCATTACAAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: LQGSSAGCARKLHFH*PQIPSMSDQVHYKL Trigger: CAGCTTGTAATGAACTTGGTCAGACATGGATGGAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR TCA 90 bp | CTCCAGGGATCATCAGCTGGATGTGCCCGGAAACTGCATTTTCACTaGCCCCAGATTCCATCCATGTCTGACCAAGTTCATTACAAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: LQGSSAGCARKLHFH*PQIPSMSDQVHYKP Trigger: TGGCTTGTAATGAACTTGGTCAGACATGGATGGAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214222.3 |
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| 3UTR GCA 90 bp | CTGTGTAAAGCAAGCAGAACCAACACGGGTTACTCCTCAGTTCTCTaGAGCACTCAGGAATTCACACAGGCATTTGATCTTGTATTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: LCKASRTNTGYSSVL*STQEFTQAFDLVFF Trigger: GAAGAATACAAGATCAAATGCCTGTGTGAATTCCTGAGTGCTGCAGAGAACTGAGGAGTAACCCGTGTTGGTTCTGCTTGCTTTACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140768.3 |
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| 3UTR GCA 90 bp | AACCAATGTTTCCTGAACGTAATTCTGTCTGCCGTGAACATAGCTTaGTTTTATCTATGCTTCATCTTAAATATTCAATCCATGGGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: NQCFLNVILSAVNIA*FYLCFILNIQSMGL Trigger: TAAACCCATGGATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGACAGAATTACGTTCAGGAAACATTGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR-3UTR GCA 90 bp | CACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGACGCCTTCTCGTTTCAGGATGTGCCCGGAAACTaGATTTTCACTGACCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HHPHGGGETGCADAFSFQDVPGN*IFTDPR Trigger: TCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATC...CTGAAACGAGAAGGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR-3UTR TCA 90 bp | TGTACCAAGATCCCGGCCACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGAAACTGCATTTTCACTaGCCCCAGATTCCATCCATG | + |
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Preference number: 2 (lower is better) Translates to: CTKIPATTPMVVGRLAAQKLHFH*PQIPSM Trigger: CATGGATGGAATCTGGGGTCAGTGAAAATGCAGTTT...CTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCGGGATCTTGGTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR CAA 90 bp | CTGTCAGCCACAGCCACCAGGCCACACAGTCAGTCCATCCTCCATTaGTGCTATTTATCGTCCAGAGCCGTAGGCCACAGACACGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: LSATATRPHSQSILH*CYLSSRAVGHRHGW Trigger: CCATCCGTGTCTGTGGCCTACGGCTCTGGACGATAAATAGCACAAATGGAGGATGGACTGACTGTGTGGCCTGGTGGCTGTGGCTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTGCGTGGGCAGTGCTGCTGCCCTCTTCTTGTATTCTTCTTGTTGCTTTCCCTCAGGGTGTGTTCTaGTGCGTGGACCTTACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PPAWAVLLPSSCILLVAFPQGVF*CVDLTQ Trigger: CTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGG...GAAAGCAACAAGAAGAATACAAGAAGAGGGCAGCAGCACTGCCCACGCAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR CAA 90 bp | GTTCCTCAGGGTGTGTTCTGCTGCGTGGACCTTACTCAGTCCTGCTaGATATGGCTGGAAGAAAAGCCGATTCATGTTGGCCAGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VPQGVFCCVDLTQSC*IWLEEKPIHVGQLH Trigger: GTGGAGCTGGCCAACATGAATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCATGGTGGTGGGGAGACTGGCTGCGCAGACGCCTTCTCGTTTCAGGGTTTTGATTCCATCCATGTCTaGCCAAGTTCATTACAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PHGGGETGCADAFSFQGFDSIHV*PSSLQA Trigger: AGCTTGTAATGAACTTGGTCAGACATGGATGGAATC...AAAACCCTGAAACGAGAAGGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR-3UTR GCA 90 bp | CCACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGACGCCTTCTCGTTTCAACTCACTGTATTTATTaGCATTCGAGCTTCAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PPPPWWWGDWLRRRLLVSTHCIY*HSSFKV Trigger: AACTTTGAAGCTCGAATGGCAATAAATACAGTGAGT...TGAAACGAGAAGGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214222.3 |
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| 3UTR-3UTR GCA 90 bp | AACAGAAACTTTAGTACATTTTGTACCAAGATCCCGGCCACCACCCCCATGGTGCCTCAGGGTGTGTTCTaGTGCGTGGACCTTACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NRNFSTFCTKIPATTPMVPQGVF*CVDLTQ Trigger: CTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGG...CACCATGGGGGTGGTGGCCGGGATCTTGGTACAAAATGTACTAAAGTTTCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCATGGTGGTGGGGAGACTGGCTGCGCAGACGCCTTCTCGTTTCAGGGTTTTACAAGCTGTATTTATTaGCATTCGAGCTTCAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PHGGGETGCADAFSFQGFTSCIY*HSSFKV Trigger: AACTTTGAAGCTCGAATGGCAATAAATACAGCTTGT...AAAACCCTGAAACGAGAAGGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGATCATCAGCTGGATGTGCCCGGAAACTGCATTTTCACTGACCCCAGATTCAGTGTTCCACTGTGGTaGTATTGTAGTTGTGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: RDHQLDVPGNCIFTDPRFSVPLW*YCSCGL Trigger: AAGTCCACAACTACAATATCACCACAGTGGAACACT...GAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCACATCAGGCCTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCAGGTTTGAGTTGTTTTaGCCACCACTCAGACAAGCC | + |
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Preference number: 2 (lower is better) Translates to: VHIRPRFTIEVVTLGKWSRFELF*PPLRQA Trigger: GGCTTGTCTGAGTGGTGGGCAAAACAACTCAAACCT...GCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAGGCCTGATGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAACTTTAGTACATTTTGTACCAAGATCCCGGCCACCACCCCCATGGTGGCAGTCCTGCTTGATATaGCTGGAAGAAAAGCCGATT | + |
|
Preference number: 2 (lower is better) Translates to: TETLVHFVPRSRPPPPWWQSCLI*LEEKPI Trigger: AATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTG...CCACCATGGGGGTGGTGGCCGGGATCTTGGTACAAAATGTACTAAAGTTTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCATCAATATTTGAAGCAACTACAAGTGGTGGCGCACACGCGAAGCAAGCCGAAACTGCATTTTCACTaGCCCCAGATTCCATCCATG | + |
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Preference number: 2 (lower is better) Translates to: FHQYLKQLQVVAHTRSKPKLHFH*PQIPSM Trigger: CATGGATGGAATCTGGGGTCAGTGAAAATGCAGTTT...CGGCTTGCTTCGCGTGTGCGCCACCACTTGTAGTTGCTTCAAATATTGATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR-3UTR GCA 90 bp | CAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACACTCCATCCTCCATTTGTaGTATTTATCGTCCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: QTSLASMSVFMESSMEEHSILHL*YLSSRA Trigger: GGCTCTGGACGATAAATAGCACAAATGGAGGATGGA...GTGTTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR CAA 90 bp | CATTACAAGCCACTCACTGTATTTATTGCCATTCGAGCTTCAAAGTaGTCCACACAGCTAAGAACTAGGTCAACAGGTTGTCCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HYKPLTVFIAIRASK*STQLRTRSTGCPSS Trigger: AGAAGAAGGACAACCTGTTGACCTAGTTCTTAGCTGTGTGGACAACTTTGAAGCTCGAATGGCAATAAATACAGTGAGTGGCTTGTAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214222.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCACATCAGGCCTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCAATGAAGACATTCTaGTTCAATTTCATCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VHIRPRFTIEVVTLGKWSPMKTF*FNFIQN Trigger: ATTCTGGATGAAATTGAAGCAGAATGTCTTCATTGG...GCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAGGCCTGATGTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR CAA 90 bp | CCAAGTTCATTACAAGCTGTATTTATTGCCATTCGAGCTTCAAAGTaGTCCACACAGCTAAGAACTAGGTCAACAGGTTGTCCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PSSLQAVFIAIRASK*STQLRTRSTGCPSS Trigger: AGAAGAAGGACAACCTGTTGACCTAGTTCTTAGCTGTGTGGACAACTTTGAAGCTCGAATGGCAATAAATACAGCTTGTAATGAACTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR CCA 72 bp | TTTGTACCAAGATCCCGGCCACCACCCCCATGGTGGTaGGGAGACTGGCTGCGCAGACGCCTTCTCGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: FVPRSRPPPPWW*GDWLRRRLLVS Trigger: TGAAACGAGAAGGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCGGGATCTTGGTACAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGATCCCGGCCACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGACGCCATTCGAGCTTCAAAGTaGTCCACACAGCTAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: QDPGHHPHGGGETGCADAIRASK*STQLRT Trigger: AGTTCTTAGCTGTGTGGACAACTTTGAAGCTCGAAT...GGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCGGGATCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR-3UTR CAA 90 bp | TGTACCAAGATCCCGGCCACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGCTTACTCAGTCCTGCTaGATATGGCTGGAAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: CTKIPATTPMVVGRLAAQLTQSC*IWLEEK Trigger: CTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAG...CTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCGGGATCTTGGTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR-3UTR CAA 90 bp | GATCCCGGCCACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGACGCCTTCCACTCACTGTATTTATaGCCATTCGAGCTTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: DPGHHPHGGGETGCADAFHSLYL*PFELQS Trigger: ACTTTGAAGCTCGAATGGCAATAAATACAGTGAGTG...GAAGGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCGGGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214222.3 |
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| 3UTR GCA 72 bp | TGCCTCCTCCTGGGGCTCAGCCTCCTGCGTGGGCAGTaGTGCTGCCCTCTTCTTGTATTCTTCTTGTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: CLLLGLSLLRGQ*CCPLLVFFLLL Trigger: AAGCAACAAGAAGAATACAAGAAGAGGGCAGCAGCACTGCCCACGCAGGAGGCTGAGCCCCAGGAGGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGATCCCGGCCACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGACGCCTACAAGCTGTATTTATaGCCATTCGAGCTTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: QDPGHHPHGGGETGCADAYKLYL*PFELQS Trigger: ACTTTGAAGCTCGAATGGCAATAAATACAGCTTGTA...GGCGTCTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCGGGATCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR CCA 72 bp | CACGCGAAGCAAGCCGACTCTCCAGGGATCATCAGCTaGATGTGCCCGGAAACTGCATTTTCACTGACCCCA | + |
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Preference number: 3 (lower is better) Translates to: HAKQADSPGIIS*MCPETAFSLTP Trigger: TGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTTCGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR-3UTR CAA 90 bp | GGTGGCGCACACGCGAAGCAAGCCGACTCTCCAGGGATCATCAGCTGGATGTGCCTTACTCAGTCCTGCTaGATATGGCTGGAAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: GGAHAKQADSPGIISWMCLTQSC*IWLEEK Trigger: CTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAG...GCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTTCGCGTGTGCGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR GCA 72 bp | AAGCAAGCCGACTCTCCAGGGATCATCAGCTGGATGTaGCCGGAAACTGCATTTTCACTGACCCCAGATTCC | + |
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Preference number: 3 (lower is better) Translates to: KQADSPGIISWM*PETAFSLTPDS Trigger: GGAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR-3UTR CAA 90 bp | CGAAGCAAGCCGACTCTCCAGGGATCATCAGCTGGATGTGCCCGGAAACTGCATATTCGAGCTTCAAAGTaGTCCACACAGCTAAGAACT | + |
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Preference number: 3 (lower is better) Translates to: RSKPTLQGSSAGCARKLHIRASK*STQLRT Trigger: AGTTCTTAGCTGTGTGGACAACTTTGAAGCTCGAAT...ATGCAGTTTCCGGGCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR TCA 72 bp | GTGTGTTCTGCTGCGTGGACCTTACTCAGTCCTGCTTaGTATGGCTGGAAGAAAAGCCGATTCATGTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: VCSAAWTLLSPA*YGWKKSRFMLA Trigger: GGCCAACATGAATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR-3UTR CAA 90 bp | CTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCTTGCAGGGAATTCTGCAGAGGCAGGTTaGAGTTGTTTTGCCCACCAC | + |
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Preference number: 3 (lower is better) Translates to: LGLQLKWSHLGNGALAGNSAEAG*SCFAHH Trigger: GTGGTGGGCAAAACAACTCAAACCTGCCTCTGCAGA...ATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR TCA 72 bp | GGAATAAATACCTGTGCACCTCTGCAGAGGCAGGTTTaGGTTGTTTTGCCCACCACTCAGACAAGCCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: GINTCAPLQRQV*VVLPTTQTSLA Trigger: AGCAAGGCTTGTCTGAGTGGTGGGCAAAACAACTCAAACCTGCCTCTGCAGAGGTGCACAGGTATTTATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR GCA 72 bp | AACATCAGGGTTAATGTTCCTCAGGGTGTGTTCTGCTaGGTGGACCTTACTCAGTCCTGCTTGATATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: NIRVNVPQGVFC*VDLTQSCLIWL Trigger: CAGCCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGGAACATTAACCCTGATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR GCA 72 bp | CAGAACATCAGGGTTAATGTTCCTCAGGGTGTGTTCTaGTGCGTGGACCTTACTCAGTCCTGCTTGATATGG | + |
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Preference number: 3 (lower is better) Translates to: QNIRVNVPQGVF*CVDLTQSCLIW Trigger: CCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGGAACATTAACCCTGATGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR GCA 72 bp | CAGGGTGTGTTCTGCTGCGTGGACCTTACTCAGTCCTaGTTGATATGGCTGGAAGAAAAGCCGATTCATGTT | + |
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Preference number: 3 (lower is better) Translates to: QGVFCCVDLTQS*LIWLEEKPIHV Trigger: AACATGAATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| 3UTR TCA 72 bp | CAAAGTATGGACGGTGTCTGTTCTTCAGTAACATGGTaGCCAGACACTTCCGCTACAGAGAGCGATGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: QSMDGVCSSVTW*PDTSATESDAF Trigger: AAAGGCATCGCTCTCTGTAGCGGAAGTGTCTGGTCACCATGTTACTGAAGAACAGACACCGTCCATACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR TCA 72 bp | TCATCAGCTGGATGTGCCCGGAAACTGCATTTTCACTaGCCCCAGATTCCATCCATGTCTGACCAAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SSAGCARKLHFH*PQIPSMSDQVH Trigger: ATGAACTTGGTCAGACATGGATGGAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
||
| 3UTR GCA 72 bp | GCAAGCAGAACCAACACGGGTTACTCCTCAGTTCTCTaGAGCACTCAGGAATTCACACAGGCATTTGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: ASRTNTGYSSVL*STQEFTQAFDL Trigger: AAGATCAAATGCCTGTGTGAATTCCTGAGTGCTGCAGAGAACTGAGGAGTAACCCGTGTTGGTTCTGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140768.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCTTGCAGGGAATTGCCGTGAACATAGCTaGCTTTTATCTATGCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LGLQLKWSHLGNGALAGNCREHS*LLSMLH Trigger: ATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCA...ATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTCATCAATATTTGAAGCAACTACAAGTGGTGGCGCACACGCGAAGCAAGCCGTACAAGCTGTATTTATaGCCATTCGAGCTTCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FHQYLKQLQVVAHTRSKPYKLYL*PFELQS Trigger: ACTTTGAAGCTCGAATGGCAATAAATACAGCTTGTA...CGGCTTGCTTCGCGTGTGCGCCACCACTTGTAGTTGCTTCAAATATTGATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
||
| 3UTR TCA 72 bp | ACTGCATTTTCACTGACCCCAGATTCCATCCATGTCTaGCCAAGTTCATTACAAGCTGTATTTATTGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: TAFSLTPDSIHV*PSSLQAVFIAI Trigger: AATGGCAATAAATACAGCTTGTAATGAACTTGGTCAGACATGGATGGAATCTGGGGTCAGTGAAAATGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCCAGTCCATCCTCCATTaGTGCTATTTATCGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VCREHSLLLSMLHLKYSIQSILH*CYLSSR Trigger: TCTGGACGATAAATAGCACAAATGGAGGATGGACTG...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| 3UTR TCA 72 bp | AGTTCTCTGCAGCACTCAGGAATTCACACAGGCATTTaGTCTTGTATTCTTCTTGTTGCTTTCTACAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSLQHSGIHTGI*SCILLVAFYSF Trigger: AAAACTGTAGAAAGCAACAAGAAGAATACAAGATCAAATGCCTGTGTGAATTCCTGAGTGCTGCAGAGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140768.3 |
||
| 3UTR GCA 72 bp | TTCCTGAACGTAATTCTGTCTGCCGTGAACATAGCTTaGTTTTATCTATGCTTCATCTTAAATATTCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: FLNVILSAVNIA*FYLCFILNIQS Trigger: GGATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGACAGAATTACGTTCAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| 3UTR GCA 72 bp | ATTCTGTCTGCCGTGAACATAGCTTGCTTTTATCTATaGTTCATCTTAAATATTCAATCCATGGGTTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: ILSAVNIACFYL*FILNIQSMGLY Trigger: GTATAAACCCATGGATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGACAGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | GTGGCGCACACGCGAAGCAAGCCGACTCTCCAGGGATCATCAGCTGGATGTGCCGACGGCTGTAGGGATTaGAATCCAACACCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VAHTRSKPTLQGSSAGCADGCRD*NPTPRR Trigger: GCGACGAGGTGTTGGATTCCAATCCCTACAGCCGTC...GGCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTTCGCGTGTGCGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
||
| CDS-3UTR CCA 90 bp | ACACGCGAAGCAAGCCGACTCTCCAGGGATCATCAGCTGGATGTGCCCGGAAACGACGGCTGTAGGGATTaGAATCCAACACCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TREASRLSRDHQLDVPGNDGCRD*NPTPRR Trigger: GCGACGAGGTGTTGGATTCCAATCCCTACAGCCGTC...GTTTCCGGGCACATCCAGCTGATGATCCCTGGAGAGTCGGCTTGCTTCGCGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
||
| CDS-3UTR GCA 90 bp | GAGGAAACCACTAGTTCCACACAGCATAACAACTCCGTGAAGATACACATGCCATGGGGCTCAGCCTCCTaGGTGGGCAGTGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EETTSSTQHNNSVKIHMPWGSAS*VGSAAA Trigger: GGCAGCAGCACTGCCCACGCAGGAGGCTGAGCCCCA...TGGCATGTGTATCTTCACGGAGTTGTTATGCTGTGTGGAACTAGTGGTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCCACAGCCACCAGGCCACACAGTCAGTCCATCCTCCATTTGTGCTATGACGGCTGTAGGGATTaGAATCCAACACCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSATATRPHSQSILHLCYDGCRD*NPTPRR Trigger: GCGACGAGGTGTTGGATTCCAATCCCTACAGCCGTC...ATAGCACAAATGGAGGATGGACTGACTGTGTGGCCTGGTGGCTGTGGCTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGCCACAGCCACCAGGCCACACAGTCAGTCCATCCTCCATTTGTGCTATCGTGGGCAGTGCTGCTaGCCTCTTCTTGTATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSATATRPHSQSILHLCYRGQCC*PLLVFF Trigger: GAAGAATACAAGAAGAGGGCAGCAGCACTGCCCACG...ATAGCACAAATGGAGGATGGACTGACTGTGTGGCCTGGTGGCTGTGGCTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACACCCACCCCCATGGTGGTaGGGAGACTGGCTGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSLASMSVFMESSMEEHPPPWW*GDWLRR Trigger: TCTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGG...GTGTTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | ACTCAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACCACCACCCCCATGGTaGTGGGGAGACTGGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQTSLASMSVFMESSMEEPPPPW*WGDWLR Trigger: GCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGG...TTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCCACAGCCACCAGGCCACACAGTCAGTCCATCCTCCATTTGTGCTATATCCTCCGTCTTCTTTaGGACTGTGTATGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSATATRPHSQSILHLCYILRLL*DCVCHC Trigger: ACAGTGGCATACACAGTCCCAAAGAAGACGGAGGAT...ATAGCACAAATGGAGGATGGACTGACTGTGTGGCCTGGTGGCTGTGGCTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | AACAGAAACTTTAGTACATTTTGTACCAAGATCCCGGCCACCACCCCCATGGTGGACGGCTGTAGGGATTaGAATCCAACACCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NRNFSTFCTKIPATTPMVDGCRD*NPTPRR Trigger: GCGACGAGGTGTTGGATTCCAATCCCTACAGCCGTC...CACCATGGGGGTGGTGGCCGGGATCTTGGTACAAAATGTACTAAAGTTTCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
||
| CDS-3UTR CCA 90 bp | GTTCACATCAGGCCTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCAGCAACTACAAGTGGTaGCGCACACGCGAAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHIRPRFTIEVVTLGKWSSNYKW*RTREAS Trigger: GCTTGCTTCGCGTGTGCGCCACCACTTGTAGTTGCT...GCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAGGCCTGATGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| 3UTR CAA 72 bp | GGGAATAAATACCTGTGCACCTCTGCAGAGGCAGGTTaGAGTTGTTTTGCCCACCACTCAGACAAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNKYLCTSAEAG*SCFAHHSDKPC Trigger: GCAAGGCTTGTCTGAGTGGTGGGCAAAACAACTCAAACCTGCCTCTGCAGAGGTGCACAGGTATTTATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| 3UTR CAA 72 bp | GGTGTGTTCTGCTGCGTGGACCTTACTCAGTCCTGCTaGATATGGCTGGAAGAAAAGCCGATTCATGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVFCCVDLTQSC*IWLEEKPIHVG Trigger: GCCAACATGAATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACACCTCATGAACCACCTCTaGCTCCTCCTGGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTSLASMSVFMESSMEEHLMNHL*LLLGLS Trigger: GCTGAGCCCCAGGAGGAGGCAGAGGTGGTTCATGAG...GTGTTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACACCACTCGTTGTCCTCATaGACCACCTCTGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTSLASMSVFMESSMEEHHSLSS*TTSASS Trigger: GGAGGAGGCAGAGGTGGTTCATGAGGACAACGAGTG...GTGTTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | GAGGAAACCACTAGTTCCACACAGCATAACAACTCCGTGAAGATACACATGCCACAGACACCAGCTCAATaGCCCACTCGTTGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EETTSSTQHNNSVKIHMPQTPAQ*PTRCPH Trigger: ATGAGGACAACGAGTGGGGCATTGAGCTGGTGTCTG...TGGCATGTGTATCTTCACGGAGTTGTTATGCTGTGTGGAACTAGTGGTTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | CGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCCATGGGCGGCCACCACCCCCATaGTGGTGGGGAGACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: REHSLLLSMLHLKYSIHGRPPPP*WWGDWL Trigger: CAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCG...CCCATGGATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | TCCATGGGTTTATACACTACCAATGAAGACATTCTGCTTCAATTTCATCCAGAAGCTCAGCCTCCTGCGTaGGCAGTGCTGCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMGLYTTNEDILLQFHPEAQPPA*AVLLPS Trigger: AGAGGGCAGCAGCACTGCCCACGCAGGAGGCTGAGC...TTCTGGATGAAATTGAAGCAGAATGTCTTCATTGGTAGTGTATAAACCCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | AATGTTCCTCAGGGTGTGTTCTGCTGCGTGGACCTTACTCAGTCCTGCTTGATAACCAACACCTACTATTaGTACAGCGTAGGTACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NVPQGVFCCVDLTQSCLITNTYY*YSVGTD Trigger: ATCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGT...TATCAAGCAGGACTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGGAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
||
| CDS-3UTR GCA 90 bp | AAGCAACTACAAGTGGTGGCGCACACGCGAAGCAAGCCGACTCTCCAGGGATCATTTTTACCTTACCAATaGCACATCTTGTCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KQLQVVAHTRSKPTLQGSFLPYQ*HILSAF Trigger: AAATGCTGACAAGATGTGGCATTGGTAAGGTAAAAA...TGATCCCTGGAGAGTCGGCTTGCTTCGCGTGTGCGCCACCACTTGTAGTTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000214222.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAAACTTTAGTACATTTTGTACCAAGATCCCGGCCACCACCCCCATGGTGGAAAGAGCAGCAGCAATaGCACATCTTGTCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TETLVHFVPRSRPPPPWWKEQQQ*HILSAF Trigger: AAATGCTGACAAGATGTGGCATTGCTGCTGCTCTTT...CCACCATGGGGGTGGTGGCCGGGATCTTGGTACAAAATGTACTAAAGTTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCTTGCAGGGAATCAGTCCTGCTTGATATaGCTGGAAGAAAAGCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGLQLKWSHLGNGALAGNQSCLI*LEEKPI Trigger: AATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTG...ATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCTGGTGGTGGGGAGACTaGCTGCGCAGACGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCREHSLLLSMLHLKYSIWWWGD*LRRRLL Trigger: GAGAAGGCGTCTGCGCAGCCAGTCTCCCCACCACCA...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| 3UTR CAA 72 bp | ACATCAGGCCTCGGTTTACAATTGAAGTGGTCACACTaGGGAAATGGAGCCCTTGCAGGGAATAAATACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGLGLQLKWSH*GNGALAGNKYL Trigger: CAGGTATTTATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAGGCCTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR TCA 90 bp | AGGGATCATCAGCTGGATGTGCCCGGAAACTGCATTTTCACTGACCCCAGATTCTTTTCTTATAGTCACTaGCAATTCCCATCCGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDHQLDVPGNCIFTDPRFFSYSH*QFPSVS Trigger: TGAAACGGATGGGAATTGTCAGTGACTATAAGAAAA...GAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGATCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
||
| CDS-3UTR TCA 90 bp | CTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCTTGCAGGGAATAGTGTTCCACTGTGGTaGTATTGTAGTTGTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLQLKWSHLGNGALAGNSVPLW*YCSCGL Trigger: AAGTCCACAACTACAATATCACCACAGTGGAACACT...ATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | CGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCCATGGGGGTGGGGAGACTGGCTaGGCAGACGCCTTCTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: REHSLLLSMLHLKYSIHGGGETG*ADAFSF Trigger: AAACGAGAAGGCGTCTGCGCAGCCAGTCTCCCCACC...CCCATGGATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR TCA 90 bp | ATCATCAGCTGGATGTGCCCGGAAACTGCATTTTCACTGACCCCAGATTCCATCTTTTCTTATAGTCACTaGCAATTCCCATCCGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IISWMCPETAFSLTPDSIFSYSH*QFPSVS Trigger: TGAAACGGATGGGAATTGTCAGTGACTATAAGAAAA...GATGGAATCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATCCAGCTGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
||
| CDS-3UTR TCA 90 bp | ACTCAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACTTCAGTTCCTCTTCTaGAACCTCAGACACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQTSLASMSVFMESSMEELQFLF*NLRHQL Trigger: GAGCTGGTGTCTGAGGTTTCAGAAGAGGAACTGAAG...TTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | CCCCAGATTCCATCCATGTCTGACCAAGTTCATTACAAGCCACTCACTGTATTTACCAACACCTACTATTaGTACAGCGTAGGTACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQIPSMSDQVHYKPLTVFTNTYY*YSVGTD Trigger: ATCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGT...AAATACAGTGAGTGGCTTGTAATGAACTTGGTCAGACATGGATGGAATCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214222.3 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACACCTTTGGGACTGTGTATaGCACTGTAATGCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLASMSVFMESSMEEHLWDCV*HCNAFR Trigger: CCTGAAGGCATTACAGTGGCATACACAGTCCCAAAG...GTGTTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR TCA 90 bp | CTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCTTGCAGGGAATTTTTCTTATAGTCACTaGCAATTCCCATCCGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLQLKWSHLGNGALAGNFSYSH*QFPSVS Trigger: TGAAACGGATGGGAATTGTCAGTGACTATAAGAAAA...ATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCCCTCAGGGTGTGTTCTaGTGCGTGGACCTTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCREHSLLLSMLHLKYSIPQGVF*CVDLTQ Trigger: CTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGG...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| 3UTR CAA 72 bp | CCACTCACTGTATTTATTGCCATTCGAGCTTCAAAGTaGTCCACACAGCTAAGAACTAGGTCAACAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLTVFIAIRASK*STQLRTRSTGC Trigger: ACAACCTGTTGACCTAGTTCTTAGCTGTGTGGACAACTTTGAAGCTCGAATGGCAATAAATACAGTGAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214222.3 |
||
| CDS-3UTR TCA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCGGTGGGAACAGGACCTaGAGAGTTCTTCAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCREHSLLLSMLHLKYSIGGNRT*RVLQFL Trigger: GAGGAACTGAAGAACTCTTCAGGTCCTGTTCCCACC...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTTCCACTGTGGTGATATTGTAGTTGTGGACTTCAAACAGAACATCAGGACCAACACCTACTATTaGTACAGCGTAGGTACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVFHCGDIVVVDFKQNIRTNTYY*YSVGTD Trigger: ATCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGT...CCTGATGTTCTGTTTGAAGTCCACAACTACAATATCACCACAGTGGAACACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
||
| CDS-3UTR GCA 90 bp | ACTCAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAAGCAGCAGCTTACCAATaGCACATCTTGTCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSLASMSVFMESSMEEAAAYQ*HILSAF Trigger: AAATGCTGACAAGATGTGGCATTGGTAAGCTGCTGC...TTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR GCA 90 bp | CGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCCATGGGGATGTGCCCGGAAACTaGATTTTCACTGACCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: REHSLLLSMLHLKYSIHGDVPGN*IFTDPR Trigger: TCTGGGGTCAGTGAAAATGCAGTTTCCGGGCACATC...CCCATGGATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
||
| CDS-3UTR TCA 90 bp | GTGTTCCACTGTGGTGATATTGTAGTTGTGGACTTCAAACAGAACATCAGGGTTTTTTCTTATAGTCACTaGCAATTCCCATCCGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFHCGDIVVVDFKQNIRVFSYSH*QFPSVS Trigger: TGAAACGGATGGGAATTGTCAGTGACTATAAGAAAA...AACCCTGATGTTCTGTTTGAAGTCCACAACTACAATATCACCACAGTGGAACAC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| 3UTR CAA 72 bp | TTACAAGCTGTATTTATTGCCATTCGAGCTTCAAAGTaGTCCACACAGCTAAGAACTAGGTCAACAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LQAVFIAIRASK*STQLRTRSTGC Trigger: ACAACCTGTTGACCTAGTTCTTAGCTGTGTGGACAACTTTGAAGCTCGAATGGCAATAAATACAGCTTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| 3UTR CAA 72 bp | CAGTTCTCTGCAGCACTCAGGAATTCACACAGGCATTaGATCTTGTATTCTTCTTGTTGCTTTCTACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: QFSAALRNSHRH*ILYSSCCFLQF Trigger: AAACTGTAGAAAGCAACAAGAAGAATACAAGATCAAATGCCTGTGTGAATTCCTGAGTGCTGCAGAGAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140768.3 |
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| CDS-3UTR TCA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCAAACTGCATTTTCACTaGCCCCAGATTCCATCCATG | + |
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Preference number: 4 (lower is better) Translates to: VCREHSLLLSMLHLKYSIKLHFH*PQIPSM Trigger: CATGGATGGAATCTGGGGTCAGTGAAAATGCAGTTT...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR GCA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCACCAACACCTACTATTaGTACAGCGTAGGTACGGAT | + |
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Preference number: 4 (lower is better) Translates to: VCREHSLLLSMLHLKYSITNTYY*YSVGTD Trigger: ATCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGT...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| 3UTR CAA 72 bp | TCTGCAGCACTCAGGAATTCACACAGGCATTTGATCTaGTATTCTTCTTGTTGCTTTCTACAGTTTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SAALRNSHRHLI*YSSCCFLQFLS Trigger: TGACAAAAACTGTAGAAAGCAACAAGAAGAATACAAGATCAAATGCCTGTGTGAATTCCTGAGTGCTGCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140768.3 |
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| CDS-3UTR TCA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCGATTCCATCCATGTCTaGCCAAGTTCATTACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: VCREHSLLLSMLHLKYSIDSIHV*PSSLQA Trigger: AGCTTGTAATGAACTTGGTCAGACATGGATGGAATC...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR GCA 90 bp | TTACAAGCCACTCACTGTATTTATTGCCATTCGAGCTTCAAAGTTGTCCACACATTTTTACCTTACCAATaGCACATCTTGTCAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: LQATHCIYCHSSFKVVHTFLPYQ*HILSAF Trigger: AAATGCTGACAAGATGTGGCATTGGTAAGGTAAAAA...TGTGTGGACAACTTTGAAGCTCGAATGGCAATAAATACAGTGAGTGGCTTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214222.3 |
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| 3UTR CAA 72 bp | TTTCCTGAACGTAATTCTGTCTGCCGTGAACATAGCTaGCTTTTATCTATGCTTCATCTTAAATATTCAATC | + |
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Preference number: 4 (lower is better) Translates to: FPERNSVCREHS*LLSMLHLKYSI Trigger: GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGACAGAATTACGTTCAGGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR GCA 90 bp | GTCTGCCGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCACAAGCTGTATTTATTaGCATTCGAGCTTCAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: VCREHSLLLSMLHLKYSITSCIY*HSSFKV Trigger: AACTTTGAAGCTCGAATGGCAATAAATACAGCTTGT...GATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACGGCAGAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS GCA 90 bp | GGCTGTAGGGATTGGAATCCAACACCTCGTCGCTCATCTCCTGGATaGGGGTCCGGCCGCAGTGGCCGTCCCCTCCAGAGCGCCGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GCRDWNPTPRRSSPG*GSGRSGRPLQSAGF Trigger: GAACCCGGCGCTCTGGAGGGGACGGCCACTGCGGCCGGACCCGCATCCAGGAGATGAGCGACGAGGTGTTGGATTCCAATCCCTACAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035166.12 ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS-3UTR CAA 90 bp | TGTACCAAGATCCCGGCCACCACCCCCATGGTGGTGGGGAGACTGGCTGCGCAGCACCAACACCTACTATaGCTACAGCGTAGGTACGGA | + |
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Preference number: 5 (lower is better) Translates to: CTKIPATTPMVVGRLAAQHQHLL*LQRRYG Trigger: TCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGTG...CTGCGCAGCCAGTCTCCCCACCACCATGGGGGTGGTGGCCGGGATCTTGGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS-3UTR CAA 90 bp | ATCAGGGTTAATGTTCCTCAGGGTGTGTTCTGCTGCGTGGACCTTACTCAGTCCCACCAACACCTACTATaGCTACAGCGTAGGTACGGA | + |
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Preference number: 5 (lower is better) Translates to: IRVNVPQGVFCCVDLTQSHQHLL*LQRRYG Trigger: TCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGTG...GGACTGAGTAAGGTCCACGCAGCAGAACACACCCTGAGGAACATTAACCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| CDS GCA 90 bp | TGGCCAGCTCCACCTTATCATAGTCAAAGAGCAGCAGCTTACCAATaGCACATCTTGTCAGCATTTCAGCAGTCACACTACCAACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: WPAPPYHSQRAAAYQ*HILSAFQQSHYQLH Trigger: GTGGAGTTGGTAGTGTGACTGCTGAAATGCTGACAAGATGTGGCATTGGTAAGCTGCTGCTCTTTGACTATGATAAGGTGGAGCTGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS GCA 90 bp | GTTGGCCAGCTCCACCTTATCATAGTCAAAGAGCAGCAGCTGATTTaGTCCCGGAGTGAACAGTTTCCTACTGGACAGGCAAAGAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: VGQLHLIIVKEQQLI*SRSEQFPTGQAKRN Trigger: ATTTCTCTTTGCCTGTCCAGTAGGAAACTGTTCACTCCGGGAGCAAATCAGCTGCTGCTCTTTGACTATGATAAGGTGGAGCTGGCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000214222.3 |
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| CDS-3UTR CAA 90 bp | AACAGAAACTTTAGTACATTTTGTACCAAGATCCCGGCCACCACCCCCATGGTGCACCAACACCTACTATaGCTACAGCGTAGGTACGGA | + |
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Preference number: 5 (lower is better) Translates to: NRNFSTFCTKIPATTPMVHQHLL*LQRRYG Trigger: TCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGTG...CACCATGGGGGTGGTGGCCGGGATCTTGGTACAAAATGTACTAAAGTTTCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS GCA 90 bp | GGTACGGATTTTCTTATAGTCACTGACAATTCCCATCCGTTTCAATaGCATCAGACGGCTGTAGGGATTGGAATCCAACACCTCGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: GTDFLIVTDNSHPFQ*HQTAVGIGIQHLVA Trigger: AGCGACGAGGTGTTGGATTCCAATCCCTACAGCCGTCTGATGGCATTGAAACGGATGGGAATTGTCAGTGACTATAAGAAAATCCGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035166.12 ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS CCA 90 bp | TACTCAGTCCTGCTTGATATGGCTGGAAGAAAAGCCGATTCATGTTaGCCAGCTCCACCTTATCATAGTCAAAGAGCAGCAGCTTACCAA | + |
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Preference number: 5 (lower is better) Translates to: YSVLLDMAGRKADSC*PAPPYHSQRAAAYQ Trigger: TTGGTAAGCTGCTGCTCTTTGACTATGATAAGGTGGAGCTGGCCAACATGAATCGGCTTTTCTTCCAGCCATATCAAGCAGGACTGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR CAA 90 bp | CTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCTTGCAGGGAATGCTGCTGCCCTCTTCTaGTATTCTTCTTGTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LGLQLKWSHLGNGALAGNAAALF*YSSCCF Trigger: AAAGCAACAAGAAGAATACAAGAAGAGGGCAGCAGC...ATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR CAA 90 bp | CAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAACACCACCAACACCTACTATaGCTACAGCGTAGGTACGGA | + |
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Preference number: 5 (lower is better) Translates to: QTSLASMSVFMESSMEEHHQHLL*LQRRYG Trigger: TCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGTG...GTGTTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR CAA 90 bp | CTCGGTTTACAATTGAAGTGGTCACACTTGGGAAATGGAGCCCTTGCAGGGAATATTCGAGCTTCAAAGTaGTCCACACAGCTAAGAACT | + |
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Preference number: 5 (lower is better) Translates to: LGLQLKWSHLGNGALAGNIRASK*STQLRT Trigger: AGTTCTTAGCTGTGTGGACAACTTTGAAGCTCGAAT...ATTCCCTGCAAGGGCTCCATTTCCCAAGTGTGACCACTTCAATTGTAAACCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS GCA 90 bp | CAGCATTTCAGCAGTCACACTACCAACTCCACCAACACCTACTATTaGTACAGCGTAGGTACGGATTTTCTTATAGTCACTGACAATTCC | + |
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Preference number: 5 (lower is better) Translates to: QHFSSHTTNSTNTYY*YSVGTDFLIVTDNS Trigger: GGAATTGTCAGTGACTATAAGAAAATCCGTACCTACGCTGTAGCAATAGTAGGTGTTGGTGGAGTTGGTAGTGTGACTGCTGAAATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035166.12 ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS GCA 90 bp | AGTTTCCTACTGGACAGGCAAAGAGAAATCTTTTTACCTTACCAATaGCACATCTTGTCAGCATTTCAGCAGTCACACTACCAACTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SFLLDRQREIFLPYQ*HILSAFQQSHYQLH Trigger: GTGGAGTTGGTAGTGTGACTGCTGAAATGCTGACAAGATGTGGCATTGGTAAGGTAAAAAGATTTCTCTTTGCCTGTCCAGTAGGAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000214222.3 |
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| CDS-3UTR CAA 90 bp | TTCCACTGTGGTGATATTGTAGTTGTGGACTTCAAACAGAACATCAGGGTTAATCAGCAATGCCACATCTaGTCAGCATTTCAGCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: FHCGDIVVVDFKQNIRVNQQCHI*SAFQQS Trigger: TGACTGCTGAAATGCTGACAAGATGTGGCATTGCTG...ATTAACCCTGATGTTCTGTTTGAAGTCCACAACTACAATATCACCACAGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144195.3 |
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| CDS-3UTR CAA 90 bp | TCCATGGGTTTATACACTACCAATGAAGACATTCTGCTTCAATTTCATCCAGAACTTACTCAGTCCTGCTaGATATGGCTGGAAGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SMGLYTTNEDILLQFHPELTQSC*IWLEEK Trigger: CTTTTCTTCCAGCCATATCAAGCAGGACTGAGTAAG...TTCTGGATGAAATTGAAGCAGAATGTCTTCATTGGTAGTGTATAAACCCATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR CAA 90 bp | CGTGAACATAGCTTGCTTTTATCTATGCTTCATCTTAAATATTCAATCCATGGGTACCAATGCCACATCTaGTCAGCATTTCAGCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: REHSLLLSMLHLKYSIHGYQCHI*SAFQQS Trigger: TGACTGCTGAAATGCTGACAAGATGTGGCATTGGTA...CCCATGGATTGAATATTTAAGATGAAGCATAGATAAAAGCAAGCTATGTTCACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS-3UTR CAA 90 bp | ACTCAGACAAGCCTTGCTAGCATGTCAGTATTTATGGAATCAAGTATGGAGGAATACAAGCTGTATTTATaGCCATTCGAGCTTCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TQTSLASMSVFMESSMEEYKLYL*PFELQS Trigger: ACTTTGAAGCTCGAATGGCAATAAATACAGCTTGTA...TTCCTCCATACTTGATTCCATAAATACTGACATGCTAGCAAGGCTTGTCTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS CCA 72 bp | TCGTCGCTCATCTCCTGGATGCGGGTCCGGCCGCAGTaGCCGTCCCCTCCAGAGCGCCGGGTTCTCTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSLISWMRVRPQ*PSPPERRVLSR Trigger: CCGGGAGAGAACCCGGCGCTCTGGAGGGGACGGCCACTGCGGCCGGACCCGCATCCAGGAGATGAGCGACGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035166.12 ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS GCA 72 bp | CCTCCAGAGCGCCGGGTTCTCTCCCGGGCGAGTTCCTaGTCCAGCTCCTCAACCCGCTGTCGCAGCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPERRVLSRASS*SSSSTRCRSRS Trigger: GGAGCGGCTGCGACAGCGGGTTGAGGAGCTGGAGCAGGAACTCGCCCGGGAGAGAACCCGGCGCTCTGGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035166.12 ENSMUST00000140768.3 ENSMUST00000144195.3 |
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| CDS CAA 90 bp | CCACCTTATCATAGTCAAAGAGCAGCAGCTTACCAATGCCACATCTaGTCAGCATTTCAGCAGTCACACTACCAACTCCACCAACACCTA | + |
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Preference number: 6 (lower is better) Translates to: PPYHSQRAAAYQCHI*SAFQQSHYQLHQHL Trigger: TAGGTGTTGGTGGAGTTGGTAGTGTGACTGCTGAAATGCTGACAAGATGTGGCATTGGTAAGCTGCTGCTCTTTGACTATGATAAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS CAA 72 bp | CATAGTCAAAGAGCAGCAGCTTACCAATGCCACATCTaGTCAGCATTTCAGCAGTCACACTACCAACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HSQRAAAYQCHI*SAFQQSHYQLH Trigger: GTGGAGTTGGTAGTGTGACTGCTGAAATGCTGACAAGATGTGGCATTGGTAAGCTGCTGCTCTTTGACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035166.12 |
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| CDS TCA 72 bp | TTGCTACAGCGTAGGTACGGATTTTCTTATAGTCACTaGCAATTCCCATCCGTTTCAATGCCATCAGACGGC | + |
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Preference number: 6 (lower is better) Translates to: LLQRRYGFSYSH*QFPSVSMPSDG Trigger: GCCGTCTGATGGCATTGAAACGGATGGGAATTGTCAGTGACTATAAGAAAATCCGTACCTACGCTGTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035166.12 ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS CAA 90 bp | CTGGACAGGCAAAGAGAAATCTTTTTACCTTACCAATGCCACATCTaGTCAGCATTTCAGCAGTCACACTACCAACTCCACCAACACCTA | + |
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Preference number: 6 (lower is better) Translates to: LDRQREIFLPYQCHI*SAFQQSHYQLHQHL Trigger: TAGGTGTTGGTGGAGTTGGTAGTGTGACTGCTGAAATGCTGACAAGATGTGGCATTGGTAAGGTAAAAAGATTTCTCTTTGCCTGTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000214222.3 |
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| CDS GCA 72 bp | TTTCTTATAGTCACTGACAATTCCCATCCGTTTCAATaGCATCAGACGGCTGTAGGGATTGGAATCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: FLIVTDNSHPFQ*HQTAVGIGIQH Trigger: GTGTTGGATTCCAATCCCTACAGCCGTCTGATGGCATTGAAACGGATGGGAATTGTCAGTGACTATAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035166.12 ENSMUST00000140768.3 ENSMUST00000144195.3 ENSMUST00000214222.3 |
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| CDS CAA 72 bp | CAAAGAGAAATCTTTTTACCTTACCAATGCCACATCTaGTCAGCATTTCAGCAGTCACACTACCAACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QREIFLPYQCHI*SAFQQSHYQLH Trigger: GTGGAGTTGGTAGTGTGACTGCTGAAATGCTGACAAGATGTGGCATTGGTAAGGTAAAAAGATTTCTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140768.3 ENSMUST00000214222.3 |
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