Pregenerated sensors for UBA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030061Ensembl transcript IDs: ENSMUST00000089287.7, ENSMUST00000164744.8, ENSMUST00000204056.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAGTGTCCCCACACCCACCATCAACAGCCATTCGGGTGGCTTTTaGAGGAGCATAGCCAGGGAGCAGCCGGCCGGTGGCTCGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SSVPTPTINSHSGGF*RSIAREQPAGGSSW Trigger: CCAGCTCGAGCCACCGGCCGGCTGCTCCCTGGCTATGCTCCTGCAAAAGCCACCCGAATGGCTGTTGATGGTGGGTGTGGGGACACTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR TCA 90 bp | ACAAGAACTGGAGTGATTCAGTGCTTGGTTCGAAATCGGGGTGTGTaGAGGGTCCAGACCGCTCGAGGAACTTCTTTACATGGTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: TRTGVIQCLVRNRGV*RVQTARGTSLHGSS Trigger: GCTGGAACCATGTAAAGAAGTTCCTCGAGCGGTCTGGACCCTTCACACACCCCGATTTCGAACCAAGCACTGAATCACTCCAGTTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR GCA 90 bp | CCATCTAATGGAACCCCATCTCCAAAAGGCTGCTCTTTAGGCCATTaGAACATCCTCACATACTCGATACAGTGTTCTGGGAGCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: PSNGTPSPKGCSLGH*NILTYSIQCSGSLG Trigger: GCCCAGGCTCCCAGAACACTGTATCGAGTATGTGAGGATGTTGCAATGGCCTAAAGAGCAGCCTTTTGGAGATGGGGTTCCATTAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR GCA 90 bp | CATCCTCACATACTCGATACAGTGTTCTGGGAGCCTGGGCATAGATaGAATGGTACACATGGGGAAATTGACCTGTGGTGGGTAAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: HPHILDTVFWEPGHR*NGTHGEIDLWWVKF Trigger: GAACTTTACCCACCACAGGTCAATTTCCCCATGTGTACCATTGCATCTATGCCCAGGCTCCCAGAACACTGTATCGAGTATGTGAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR GCA 90 bp | CTCAGTGGCACACACAGCTGCAATGACTGCATTTGTAGAAGCTACTaGAGGAATGATTCGTTTTACCACCCCTTGAGTGAGTCTGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: LSGTHSCNDCICRSY*RNDSFYHPLSESVG Trigger: ACCTACAGACTCACTCAAGGGGTGGTAAAACGAATCATTCCTGCAGTAGCTTCTACAAATGCAGTCATTGCAGCTGTGTGTGCCACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR CCA 90 bp | CTCTTTAGGCCATTGCAACATCCTCACATACTCGATACAGTGTTCTaGGAGCCTGGGCATAGATGCAATGGTACACATGGGGAAATTGAC | + |
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Preference number: 1 (lower is better) Translates to: LFRPLQHPHILDTVF*EPGHRCNGTHGEID Trigger: GTCAATTTCCCCATGTGTACCATTGCATCTATGCCCAGGCTCCCAGAACACTGTATCGAGTATGTGAGGATGTTGCAATGGCCTAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR TCA 90 bp | TTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTCTTTaGCCACAACAAACTCACACACAAGACAGTGTTTGTCCTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: FYTCGFQIHAEEYAL*PQQTHTQDSVCPAL Trigger: TAAAGCAGGACAAACACTGTCTTGTGTGTGAGTTTGTTGTGGTCAAAGAGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR TCA 90 bp | ATGCCAGATTTTTCAGAAGCTCACATCCTAAGCCACCAGCTCCAATaGCTAGAACTTTACATGTATCTAACAAGAACTGGAGTGATTCAG | + |
|
Preference number: 1 (lower is better) Translates to: MPDFSEAHILSHQLQ*LELYMYLTRTGVIQ Trigger: CTGAATCACTCCAGTTCTTGTTAGATACATGTAAAGTTCTAGTCATTGGAGCTGGTGGCTTAGGATGTGAGCTTCTGAAAAATCTGGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR CAA 90 bp | CTCCAGTGTCCCCACACCCACCATCAACAGCCATTCGGGTGGCTTTaGCAGGAGCATAGCCAGGGAGCAGCCGGCCGGTGGCTCGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LQCPHTHHQQPFGWL*QEHSQGAAGRWLEL Trigger: CAGCTCGAGCCACCGGCCGGCTGCTCCCTGGCTATGCTCCTGCAAAAGCCACCCGAATGGCTGTTGATGGTGGGTGTGGGGACACTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTCGAAATCGGGGTGTGTaGAGGGTCCAGACCGCTCGA | + |
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Preference number: 2 (lower is better) Translates to: PHFHPRRHFYTCGFQIHARNRGV*RVQTAR Trigger: TCGAGCGGTCTGGACCCTTCACACACCCCGATTTCG...AGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTCATTCGGGTGGCTTTTaGAGGAGCATAGCCAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PRRHFYTCGFQIHAEEYAHSGGF*RSIARE Trigger: CTCCCTGGCTATGCTCCTGCAAAAGCCACCCGAATG...AGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | TACGCACTTGTAGCTATCTTGAAAACCTCAGTGGCACACACAGCTGCAATGACTGAGCCTGGGCATAGATaGAATGGTACACATGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: YALVAILKTSVAHTAAMTEPGHR*NGTHGE Trigger: TTCCCCATGTGTACCATTGCATCTATGCCCAGGCTC...AGTCATTGCAGCTGTGTGTGCCACTGAGGTTTTCAAGATAGCTACAAGTGCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGTCATCTCCATCTAATGGAACCCCATCTCCAAAAGGCTGCTCTTTAGGCAGCCACCAGCTCCAATaGCTAGAACTTTACATGTAT | + |
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Preference number: 2 (lower is better) Translates to: SGSSPSNGTPSPKGCSLGSHQLQ*LELYMY Trigger: ATACATGTAAAGTTCTAGTCATTGGAGCTGGTGGCT...GCCTAAAGAGCAGCCTTTTGGAGATGGGGTTCCATTAGATGGAGATGACCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGTTGGATGTTCCCCTCTaGCTCATCTTCCAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQLDVPL*LIFQAL Trigger: AAGAGCCTGGAAGATGAGGCAGAGGGGAACATCCAA...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTTTGGATGTTCCCCTCTaGCTCATCTTCCAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PHFHPRRHFYTCGFQIHALDVPL*LIFQAL Trigger: AAGAGCCTGGAAGATGAGGCAGAGGGGAACATCCAA...AGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGTCATCTCCATCTAATGGAACCCCATCTCCAAAAGGCTGCTCTTTAGGCAGACAGTGTTTGTCCTaGTTTAAAGAAGCAACACAC | + |
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Preference number: 2 (lower is better) Translates to: SGSSPSNGTPSPKGCSLGRQCLS*FKEATH Trigger: GTGTGTTGCTTCTTTAAAGCAGGACAAACACTGTCT...GCCTAAAGAGCAGCCTTTTGGAGATGGGGTTCCATTAGATGGAGATGACCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCTAATGGAACCCCATCTCCAAAAGGCTGCTCTTTAGGCCATTGCAACATCCTTGGTTTAAATTTGTaGATACTGGTCTCTGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PSNGTPSPKGCSLGHCNILGLNL*ILVSVA Trigger: TGCCACAGAGACCAGTATGCACAAATTTAAACCAAG...GATGTTGCAATGGCCTAAAGAGCAGCCTTTTGGAGATGGGGTTCCATTAGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | AATGATTCGTTTTACCACCCCTTGAGTGAGTCTGTAGGTAACGCCTCTAATATTCCATCTCCAAAAGGCTaGTCTTTAGGCCATTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: NDSFYHPLSESVGNASNIPSPKG*SLGHCN Trigger: GTTGCAATGGCCTAAAGAGCAGCCTTTTGGAGATGG...AATATTAGAGGCGTTACCTACAGACTCACTCAAGGGGTGGTAAAACGAATCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTTTAAATTTCCTTTCTTaGATGTTCCCCTCTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PHFHPRRHFYTCGFQIHALNFLS*MFPSAS Trigger: TGAGGCAGAGGGGAACATCCAAGAAAGGAAATTTAA...AGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCAGGAACTTCTTTACATaGTTCCAGCGACCTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: MSGCEYLLFFRHSSSFPSRNFFT*FQRPSQ Trigger: CTGGGAAGGTCGCTGGAACCATGTAAAGAAGTTCCT...GGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | CATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATAGACAGTGTTTGTCCTaGTTTAAAGAAGCAACACAC | + |
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Preference number: 2 (lower is better) Translates to: HSSSFPSQETFLHMWISDRQCLS*FKEATH Trigger: GTGTGTTGCTTCTTTAAAGCAGGACAAACACTGTCT...ATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGAAGTTGGCTACATGCTaGACAGTTTTCCTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SGCEYLLFFRHSSSFPSQKLATC*TVFLSL Trigger: GAGAGAAAGGAAAACTGTCCAGCATGTAGCCAACTT...CTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR CAA 90 bp | CTAGCCACACTAATGCTAAAAATGACACCAATTAAATTTCCTTTCTaGGATGTTCCCCTCTGCCTCATCTTCCAGGCTCTTCAATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LATLMLKMTPIKFPF*DVPLCLIFQALQFH Trigger: ATGAAATTGAAGAGCCTGGAAGATGAGGCAGAGGGGAACATCCAAGAAAGGAAATTTAATTGGTGTCATTTTTAGCATTAGTGTGGCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR CAA 90 bp | GGAATATGCTCTTTGACCACAACAAACTCACACACAAGACAGTGTTaGTCCTGCTTTAAAGAAGCAACACACTTGTTCATAATCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GICSLTTTNSHTRQC*SCFKEATHLFIISP Trigger: AGGAGAGATTATGAACAAGTGTGTTGCTTCTTTAAAGCAGGACAAACACTGTCTTGTGTGTGAGTTTGTTGTGGTCAAAGAGCATATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR TCA 90 bp | AATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGGGGAAATTaGCCTGTGGTGGGTAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: NIYYSSDIAPHFHPRRHFYTWGN*PVVGKV Trigger: AACTTTACCCACCACAGGTCAATTTCCCCATGTGTA...GAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR CCA 90 bp | AATGATTCGTTTTACCACCCCTTGAGTGAGTCTGTAGGTAACGCCTCTAATATTGTGATGCTCTCTCTATaGACTTTTGGAAAATCCACT | + |
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Preference number: 2 (lower is better) Translates to: NDSFYHPLSESVGNASNIVMLSL*TFGKST Trigger: AGTGGATTTTCCAAAAGTCCATAGAGAGAGCATCAC...AATATTAGAGGCGTTACCTACAGACTCACTCAAGGGGTGGTAAAACGAATCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR TCA 90 bp | GAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTGAGGAATATGCTCTTTaGCCACAACAAACTCACACA | + |
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Preference number: 2 (lower is better) Translates to: EYLLFFRHSSSFPSQETFEEYAL*PQQTHT Trigger: TGTGTGAGTTTGTTGTGGTCAAAGAGCATATTCCTC...AAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATATTAAATTTCCTTTCTTaGATGTTCCCCTCTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: MKMLASPTPKFSLQEKLILNFLS*MFPSAS Trigger: TGAGGCAGAGGGGAACATCCAAGAAAGGAAATTTAA...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCTTAAATTTCCTTTCTTaGATGTTCCCCTCTGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ISPEGIAFHSNKMKMLASLNFLS*MFPSAS Trigger: TGAGGCAGAGGGGAACATCCAAGAAAGGAAATTTAA...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCGTATCTAACAAGAACTaGAGTGATTCAGTGCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: ISPEGIAFHSNKMKMLASVSNKN*SDSVLG Trigger: ACCAAGCACTGAATCACTCCAGTTCTTGTTAGATAC...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR GCA 90 bp | ATTAATACACACATGGATAGTCACAATTATATGAGTAGCAATGAAGACACTGCCAGACAGTGTTTGTCCTaGTTTAAAGAAGCAACACAC | + |
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Preference number: 2 (lower is better) Translates to: INTHMDSHNYMSSNEDTARQCLS*FKEATH Trigger: GTGTGTTGCTTCTTTAAAGCAGGACAAACACTGTCT...GGCAGTGTCTTCATTGCTACTCATATAATTGTGACTATCCATGTGTGTATTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR CAA 90 bp | ACATACAATGATATGAAATTGTCGGTAGAAAGTGTCGTTAAAATCTaGTATCTTGTTGAAATGTGGTACCACGTTGCAGTTAGGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: TYNDMKLSVESVVKI*YLVEMWYHVAVRNS Trigger: AGAGTTCCTAACTGCAACGTGGTACCACATTTCAACAAGATACAAGATTTTAACGACACTTTCTACCGACAATTTCATATCATTGTATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR GCA 72 bp | CCCACACCCACCATCAACAGCCATTCGGGTGGCTTTTaGAGGAGCATAGCCAGGGAGCAGCCGGCCGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: PTPTINSHSGGF*RSIAREQPAGG Trigger: GCCACCGGCCGGCTGCTCCCTGGCTATGCTCCTGCAAAAGCCACCCGAATGGCTGTTGATGGTGGGTGTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR CCA 72 bp | CAGTGTCCCCACACCCACCATCAACAGCCATTCGGGTaGCTTTTGCAGGAGCATAGCCAGGGAGCAGCCGGC | + |
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Preference number: 3 (lower is better) Translates to: QCPHTHHQQPFG*LLQEHSQGAAG Trigger: GCCGGCTGCTCCCTGGCTATGCTCCTGCAAAAGCCACCCGAATGGCTGTTGATGGTGGGTGTGGGGACACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR CCA 72 bp | GTGAAGGGTCCAGACCGCTCGAGGAACTTCTTTACATaGTTCCAGCGACCTTCCCAGTCTCCAGTGTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VKGPDRSRNFFT*FQRPSQSPVSP Trigger: TGGGGACACTGGAGACTGGGAAGGTCGCTGGAACCATGTAAAGAAGTTCCTCGAGCGGTCTGGACCCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR TCA 72 bp | GGAGTGATTCAGTGCTTGGTTCGAAATCGGGGTGTGTaGAGGGTCCAGACCGCTCGAGGAACTTCTTTACAT | + |
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Preference number: 3 (lower is better) Translates to: GVIQCLVRNRGV*RVQTARGTSLH Trigger: ATGTAAAGAAGTTCCTCGAGCGGTCTGGACCCTTCACACACCCCGATTTCGAACCAAGCACTGAATCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR GCA 72 bp | ATACTCGATACAGTGTTCTGGGAGCCTGGGCATAGATaGAATGGTACACATGGGGAAATTGACCTGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: ILDTVFWEPGHR*NGTHGEIDLWW Trigger: CCACCACAGGTCAATTTCCCCATGTGTACCATTGCATCTATGCCCAGGCTCCCAGAACACTGTATCGAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR GCA 72 bp | GGAACCCCATCTCCAAAAGGCTGCTCTTTAGGCCATTaGAACATCCTCACATACTCGATACAGTGTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GTPSPKGCSLGH*NILTYSIQCSG Trigger: CCCAGAACACTGTATCGAGTATGTGAGGATGTTGCAATGGCCTAAAGAGCAGCCTTTTGGAGATGGGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR CCA 72 bp | CCATTGCAACATCCTCACATACTCGATACAGTGTTCTaGGAGCCTGGGCATAGATGCAATGGTACACATGGG | + |
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Preference number: 3 (lower is better) Translates to: PLQHPHILDTVF*EPGHRCNGTHG Trigger: CCCATGTGTACCATTGCATCTATGCCCAGGCTCCCAGAACACTGTATCGAGTATGTGAGGATGTTGCAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTGGAGTGATTCAGTGCTaGGTTCGAAATCGGGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PRRHFYTCGFQIHAEEYAGVIQC*VRNRGV Trigger: CACACCCCGATTTCGAACCAAGCACTGAATCACTCC...AGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGTCATCTCCATCTAATGGAACCCCATCTCCAAAAGGCTGCTCTTTAGGCTGTCTTGGTTTAAATTaGTGCATACTGGTCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SGSSPSNGTPSPKGCSLGCLGLN*CILVSV Trigger: CACAGAGACCAGTATGCACAAATTTAAACCAAGACA...GCCTAAAGAGCAGCCTTTTGGAGATGGGGTTCCATTAGATGGAGATGACCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR-3UTR CAA 90 bp | TACGCACTTGTAGCTATCTTGAAAACCTCAGTGGCACACACAGCTGCAATGACTAAGGTACAATGGAGCTaGGATCCAACACACCATCTT | + |
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Preference number: 3 (lower is better) Translates to: YALVAILKTSVAHTAAMTKVQWS*DPTHHL Trigger: AAGATGGTGTGTTGGATCCAAGCTCCATTGTACCTT...AGTCATTGCAGCTGTGTGTGCCACTGAGGTTTTCAAGATAGCTACAAGTGCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR TCA 72 bp | TGTGGATTTCAGATACACGCTGAGGAATATGCTCTTTaGCCACAACAAACTCACACACAAGACAGTGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: CGFQIHAEEYAL*PQQTHTQDSVC Trigger: ACAAACACTGTCTTGTGTGTGAGTTTGTTGTGGTCAAAGAGCATATTCCTCAGCGTGTATCTGAAATCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR TCA 72 bp | GAGACATTTCTACACATGTGGATTTCAGATACACGCTaGGGAATATGCTCTTTGACCACAACAAACTCACAC | + |
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Preference number: 3 (lower is better) Translates to: ETFLHMWISDTR*GICSLTTTNSH Trigger: GTGTGAGTTTGTTGTGGTCAAAGAGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
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| 3UTR TCA 72 bp | TGTGATGCTCTCTCTATGGACTTTTGGAAAATCCACTaGATATGTTCAGGGTCATCTCCATCTAATGGAACC | + |
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Preference number: 3 (lower is better) Translates to: CDALSMDFWKIH*ICSGSSPSNGT Trigger: GGTTCCATTAGATGGAGATGACCCTGAACATATTCAGTGGATTTTCCAAAAGTCCATAGAGAGAGCATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| 3UTR TCA 72 bp | TTTTCAGAAGCTCACATCCTAAGCCACCAGCTCCAATaGCTAGAACTTTACATGTATCTAACAAGAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSEAHILSHQLQ*LELYMYLTRTG Trigger: TCCAGTTCTTGTTAGATACATGTAAAGTTCTAGTCATTGGAGCTGGTGGCTTAGGATGTGAGCTTCTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
||
| 3UTR-3UTR CAA 90 bp | AATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTCAGTTCTTTTAATGTTTaGGAAAGATTGGGCCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NIYYSSDIAPHFHPRRHFSSFNV*ERLGLV Trigger: AACCAGGCCCAATCTTTCCAAAACATTAAAAGAACT...GAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
||
| 3UTR GCA 72 bp | ATTTTCTTTGAACAGCCATGTCTTGGTTTAAATTTGTaGATACTGGTCTCTGTGGCATTGCAAACAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: IFFEQPCLGLNL*ILVSVALQTNT Trigger: TGTATTTGTTTGCAATGCCACAGAGACCAGTATGCACAAATTTAAACCAAGACATGGCTGTTCAAAGAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
||
| 3UTR CAA 72 bp | CCCCACACCCACCATCAACAGCCATTCGGGTGGCTTTaGCAGGAGCATAGCCAGGGAGCAGCCGGCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHTHHQQPFGWL*QEHSQGAAGRW Trigger: CCACCGGCCGGCTGCTCCCTGGCTATGCTCCTGCAAAAGCCACCCGAATGGCTGTTGATGGTGGGTGTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
||
| CDS-3UTR TCA 90 bp | CCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGCGGCCTGCTCCAGGTaGCCCCCTCCCAGCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHFHPRRHFYTCGFQIHAAACSR*PPPSTL Trigger: GAGGGTGCTGGGAGGGGGTCACCTGGAGCAGGCCGC...AGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
||
| CDS-3UTR GCA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGCACCCTCGGGCCCGCTaGGGCTGGTCCCCTAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQHPRAR*GWSPRP Trigger: AGGCCTAGGGGACCAGCCGCAGCGGGCCCGAGGGTG...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATACGGGCCCGCTGCGGCTaGTCCCCTAGGCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: MKMLASPTPKFSLQEKLIRARCG*SPRPGI Trigger: AATCCCAGGCCTAGGGGACCAGCCGCAGCGGGCCCG...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTCGAAATCGGGGTGTGTaGAGGGTCCAGACCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PRRHFYTCGFQIHAEEYARNRGV*RVQTAR Trigger: TCGAGCGGTCTGGACCCTTCACACACCCCGATTTCG...AGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| 3UTR CAA 72 bp | TGGAACCCCATCTCCAAAAGGCTGCTCTTTAGGCCATaGCAACATCCTCACATACTCGATACAGTGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WNPISKRLLFRP*QHPHILDTVFW Trigger: CCAGAACACTGTATCGAGTATGTGAGGATGTTGCAATGGCCTAAAGAGCAGCCTTTTGGAGATGGGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCGAAATCGGGGTGTGTaGAGGGTCCAGACCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MSGCEYLLFFRHSSSFPSRNRGV*RVQTAR Trigger: TCGAGCGGTCTGGACCCTTCACACACCCCGATTTCG...GGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTGAGCCTGGGCATAGATaGAATGGTACACATGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRRHFYTCGFQIHAEEYAEPGHR*NGTHGE Trigger: TTCCCCATGTGTACCATTGCATCTATGCCCAGGCTC...AGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGACCATCAACAGCCATTaGCTCCTCGCCATCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGCEYLLFFRHSSSFPSQTINSH*LLAIRH Trigger: ATGGCGGATGGCGAGGAGCCAATGGCTGTTGATGGT...CTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGCTCGATACAGTGTTCTaGGAGCCTGGGCATAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SGCEYLLFFRHSSSFPSQLDTVF*EPGHRC Trigger: GCATCTATGCCCAGGCTCCCAGAACACTGTATCGAG...CTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR TCA 90 bp | TTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATACACATGGGGAAATTaGCCTGTGGTGGGTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FHPRRHFYTCGFQIHAEEYTWGN*PVVGKV Trigger: AACTTTACCCACCACAGGTCAATTTCCCCATGTGTA...TTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTTACACATGGGGAAATTaGCCTGTGGTGGGTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRRHFYTCGFQIHAEEYAYTWGN*PVVGKV Trigger: AACTTTACCCACCACAGGTCAATTTCCCCATGTGTA...AGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGCCTGGGCATAGATaGAATGGTACACATGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGCEYLLFFRHSSSFPSQEPGHR*NGTHGE Trigger: TTCCCCATGTGTACCATTGCATCTATGCCCAGGCTC...CTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATCCATCTCCAAAAGGCTaGTCTTTAGGCCATTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSFPSQETFLHMWISDPSPKG*SLGHCN Trigger: GTTGCAATGGCCTAAAGAGCAGCCTTTTGGAGATGG...ATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAAGAAATTGACCTGTGGTaGGTAAAGTTCCAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FHPRRHFYTCGFQIHAEEEIDLW*VKFQSA Trigger: TGCACTCTGGAACTTTACCCACCACAGGTCAATTTC...TTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | TTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAAGCAGAGAAGCACTGTTaGTTAGGTAGTCTAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: FHPRRHFYTCGFQIHAEEAEKHC*LGSLRP Trigger: AGGTCTTAGACTACCTAACCAACAGTGCTTCTCTGC...TTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTGGATGTTCCCCTCTGCCTCATCTTCCAGGCTCTTCAATTTCATATCATTGGTAAAGTTCCAGAGTaGACTCAATACAAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLDVPLCLIFQALQFHIIGKVPE*TQYKRS Trigger: TGACCGCTTGTATTGAGTGCACTCTGGAACTTTACC...AATGATATGAAATTGAAGAGCCTGGAAGATGAGGCAGAGGGGAACATCCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | AATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTCCTCGATACAGTGTTCTaGGAGCCTGGGCATAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NIYYSSDIAPHFHPRRHFLDTVF*EPGHRC Trigger: GCATCTATGCCCAGGCTCCCAGAACACTGTATCGAG...GAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTCCAGGCCACATACAATaGTATGAAATTGTCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRHSSSFPSQETFLHMWIPGHIQ*YEIVGR Trigger: TCTACCGACAATTTCATATCATTGTATGTGGCCTGG...AATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATAAGGAACTTCTTTACATaGTTCCAGCGACCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKMLASPTPKFSLQEKLIRNFFT*FQRPSQ Trigger: CTGGGAAGGTCGCTGGAACCATGTAAAGAAGTTCCT...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGGTATCTAACAAGAACTaGAGTGATTCAGTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQVSNKN*SDSVLG Trigger: ACCAAGCACTGAATCACTCCAGTTCTTGTTAGATAC...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGGTGATGCTCTCTCTATaGACTTTTGGAAAATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQVMLSL*TFGKST Trigger: AGTGGATTTTCCAAAAGTCCATAGAGAGAGCATCAC...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATAAGTTGGCTACATGCTaGACAGTTTTCCTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSFPSQETFLHMWISDKLATC*TVFLSL Trigger: GAGAGAAAGGAAAACTGTCCAGCATGTAGCCAACTT...ATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCATGTTTTGGAAAGATTaGGCCTGGTTCGTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSFPSQETFLHMWISDTRMFWKD*AWFVLQ Trigger: TTGAAGAACGAACCAGGCCCAATCTTTCCAAAACAT...GCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR TCA 90 bp | CCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTTTTTGGAAAATCCACTaGATATGTTCAGGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PHFHPRRHFYTCGFQIHAFWKIH*ICSGSS Trigger: AGATGACCCTGAACATATTCAGTGGATTTTCCAAAA...AGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCGGTAAAGTTCCAGAGTaGACTCAATACAAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSGCEYLLFFRHSSSFPSGKVPE*TQYKRS Trigger: TGACCGCTTGTATTGAGTGCACTCTGGAACTTTACC...GGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATAAGTGGCACACACAGCTaGAATGACTGCATTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MKMLASPTPKFSLQEKLISGTHS*NDCICR Trigger: TCTACAAATGCAGTCATTGCAGCTGTGTGTGCCACT...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGAGGAAGTTGGCTACATaGTGGACAGTTTTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGCEYLLFFRHSSSFPSQRKLAT*WTVFLS Trigger: AGAAAGGAAAACTGTCCAGCATGTAGCCAACTTCCT...CTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | GCCACACTAATGCTAAAAATGACACCAATTAAATTTCCTTTCTTGGATGTTCCCGCCGGAGACTTCATTTaGAGAGAAGCACTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATLMLKMTPIKFPFLDVPAGDFI*REALLV Trigger: AACCAACAGTGCTTCTCTGCAAATGAAGTCTCCGGC...GGGAACATCCAAGAAAGGAAATTTAATTGGTGTCATTTTTAGCATTAGTGTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCGCCGGAGACTTCATTTaGAGAGAAGCACTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISPEGIAFHSNKMKMLASAGDFI*REALLV Trigger: AACCAACAGTGCTTCTCTGCAAATGAAGTCTCCGGC...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | GAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTAGGAACTTCTTTACATaGTTCCAGCGACCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EYLLFFRHSSSFPSQETFRNFFT*FQRPSQ Trigger: CTGGGAAGGTCGCTGGAACCATGTAAAGAAGTTCCT...AAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATAAGGTACAATGGAGCTTaGATCCAACACACCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MKMLASPTPKFSLQEKLIRYNGA*IQHTIF Trigger: GAAGATGGTGTGTTGGATCCAAGCTCCATTGTACCT...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGATGTTCCCCTCTGCCTCATCTTCCAGGCTCTTCAATTTCATATCATTGTGATGCTCTCTCTATaGACTTTTGGAAAATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLDVPLCLIFQALQFHIIVMLSL*TFGKST Trigger: AGTGGATTTTCCAAAAGTCCATAGAGAGAGCATCAC...AATGATATGAAATTGAAGAGCCTGGAAGATGAGGCAGAGGGGAACATCCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTATGTTTTGGAAAGATTaGGCCTGGTTCGTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRHSSSFPSQETFLHMWIMFWKD*AWFVLQ Trigger: TTGAAGAACGAACCAGGCCCAATCTTTCCAAAACAT...AATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGGTTCTTTTAATGTTTTaGAAAGATTGGGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQVLLMF*KDWAWF Trigger: GAACCAGGCCCAATCTTTCCAAAACATTAAAAGAAC...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATAAGCCACCAGCTCCAATaGCTAGAACTTTACATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MKMLASPTPKFSLQEKLISHQLQ*LELYMY Trigger: ATACATGTAAAGTTCTAGTCATTGGAGCTGGTGGCT...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR GCA 90 bp | GCCACACTAATGCTAAAAATGACACCAATTAAATTTCCTTTCTTGGATGTTCCCAGTGGCACACACAGCTaGAATGACTGCATTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATLMLKMTPIKFPFLDVPSGTHS*NDCICR Trigger: TCTACAAATGCAGTCATTGCAGCTGTGTGTGCCACT...GGGAACATCCAAGAAAGGAAATTTAATTGGTGTCATTTTTAGCATTAGTGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATACTATCAAAGGTACAATaGAGCTTGGATCCAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: MKMLASPTPKFSLQEKLILSKVQ*SLDPTH Trigger: GTGTGTTGGATCCAAGCTCCATTGTACCTTTGATAG...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | GCCACACTAATGCTAAAAATGACACCAATTAAATTTCCTTTCTTGGATGTTCCCGAAATTGACCTGTGGTaGGTAAAGTTCCAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATLMLKMTPIKFPFLDVPEIDLW*VKFQSA Trigger: TGCACTCTGGAACTTTACCCACCACAGGTCAATTTC...GGGAACATCCAAGAAAGGAAATTTAATTGGTGTCATTTTTAGCATTAGTGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCGCAGAGAAGCACTGTTaGTTAGGTAGTCTAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPEGIAFHSNKMKMLASAEKHC*LGSLRP Trigger: AGGTCTTAGACTACCTAACCAACAGTGCTTCTCTGC...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATGTTCTTTTAATGTTTTaGAAAGATTGGGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSFPSQETFLHMWISDVLLMF*KDWAWF Trigger: GAACCAGGCCCAATCTTTCCAAAACATTAAAAGAAC...ATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
||
| 3UTR CAA 72 bp | TCTTGTCCATCAACTAGTCCCAGTTCTTTTAATGTTTaGGAAAGATTGGGCCTGGTTCGTTCTTCAATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SCPSTSPSSFNV*ERLGLVRSSID Trigger: GTCTATTGAAGAACGAACCAGGCCCAATCTTTCCAAAACATTAAAAGAACTGGGACTAGTTGATGGACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| CDS-3UTR TCA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATAAATCTTGTATCTTGTTaGAATGTGGTACCACGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MKMLASPTPKFSLQEKLINLVSC*NVVPRC Trigger: GCAACGTGGTACCACATTTCAACAAGATACAAGATT...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR GCA 90 bp | TCAGGCTGTGAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGTTTTCCTTTCTCTCTaGTTCAAACGTGTAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGCEYLLFFRHSSSFPSQVFLSL*FKRVSV Trigger: TACACTTACACGTTTGAAGCAGAGAGAAAGGAAAAC...CTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTCACAGCCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR GCA 90 bp | GAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTAGGAAGTTGGCTACATaGTGGACAGTTTTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EYLLFFRHSSSFPSQETFRKLAT*WTVFLS Trigger: AGAAAGGAAAACTGTCCAGCATGTAGCCAACTTCCT...AAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CCA 90 bp | ATTAATACACACATGGATAGTCACAATTATATGAGTAGCAATGAAGACACTGCCAGGTACAATGGAGCTTaGATCCAACACACCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: INTHMDSHNYMSSNEDTARYNGA*IQHTIF Trigger: GAAGATGGTGTGTTGGATCCAAGCTCCATTGTACCT...GGCAGTGTCTTCATTGCTACTCATATAATTGTGACTATCCATGTGTGTATTAAT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CCA 90 bp | AATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTCCTATCAAAGGTACAATaGAGCTTGGATCCAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: NIYYSSDIAPHFHPRRHFLSKVQ*SLDPTH Trigger: GTGTGTTGGATCCAAGCTCCATTGTACCTTTGATAG...GAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CCA 90 bp | GAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTAAGTTGGCTACATGCTaGACAGTTTTCCTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EYLLFFRHSSSFPSQETFKLATC*TVFLSL Trigger: GAGAGAAAGGAAAACTGTCCAGCATGTAGCCAACTT...AAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| 3UTR CAA 72 bp | TCTTTGACCACAACAAACTCACACACAAGACAGTGTTaGTCCTGCTTTAAAGAAGCAACACACTTGTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLTTTNSHTRQC*SCFKEATHLFI Trigger: TATGAACAAGTGTGTTGCTTCTTTAAAGCAGGACAAACACTGTCTTGTGTGTGAGTTTGTTGTGGTCAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 ENSMUST00000204056.2 |
||
| CDS-3UTR TCA 90 bp | ATTAATACACACATGGATAGTCACAATTATATGAGTAGCAATGAAGACACTGCCAGCCACCAGCTCCAATaGCTAGAACTTTACATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: INTHMDSHNYMSSNEDTASHQLQ*LELYMY Trigger: ATACATGTAAAGTTCTAGTCATTGGAGCTGGTGGCT...GGCAGTGTCTTCATTGCTACTCATATAATTGTGACTATCCATGTGTGTATTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR TCA 90 bp | ATTAATACACACATGGATAGTCACAATTATATGAGTAGCAATGAAGACACTGCCCCAGGCCACATACAATaGTATGAAATTGTCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: INTHMDSHNYMSSNEDTAPGHIQ*YEIVGR Trigger: TCTACCGACAATTTCATATCATTGTATGTGGCCTGG...GGCAGTGTCTTCATTGCTACTCATATAATTGTGACTATCCATGTGTGTATTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR TCA 90 bp | GAATATTTACTATTCTTCAGACATAGCTCCTCATTTCCATCCCAGGAGACATTTTTTTGGAAAATCCACTaGATATGTTCAGGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EYLLFFRHSSSFPSQETFFWKIH*ICSGSS Trigger: AGATGACCCTGAACATATTCAGTGGATTTTCCAAAA...AAATGTCTCCTGGGATGGAAATGAGGAGCTATGTCTGAAGAATAGTAAATATTC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR GCA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCGTTTTCCTTTCTCTCTaGTTCAAACGTGTAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISPEGIAFHSNKMKMLASVFLSL*FKRVSV Trigger: TACACTTACACGTTTGAAGCAGAGAGAAAGGAAAAC...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| 3UTR CAA 72 bp | GATATGAAATTGTCGGTAGAAAGTGTCGTTAAAATCTaGTATCTTGTTGAAATGTGGTACCACGTTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DMKLSVESVVKI*YLVEMWYHVAV Trigger: AACTGCAACGTGGTACCACATTTCAACAAGATACAAGATTTTAACGACACTTTCTACCGACAATTTCATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204056.2 |
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| CDS-3UTR CAA 90 bp | TTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAACACCATCAACAGCCATaGGCTCCTCGCCATCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FHPRRHFYTCGFQIHAEEHHQQP*APRHPP Trigger: TGGCGGATGGCGAGGAGCCAATGGCTGTTGATGGTG...TTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGGGAGTGATTCAGTGCTaGGTTCGAAATCGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQGVIQC*VRNRGV Trigger: CACACCCCGATTTCGAACCAAGCACTGAATCACTCC...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | CCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGGAGTGATTCAGTGCTaGGTTCGAAATCGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHFHPRRHFYTCGFQIHAGVIQC*VRNRGV Trigger: CACACCCCGATTTCGAACCAAGCACTGAATCACTCC...AGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTGCAGCAACTTCAGCCTaGGGTCTTCCGACATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRRHFYTCGFQIHAEEYAAATSA*GLPTSL Trigger: TAAAGATGTCGGAAGACCCAAGGCTGAAGTTGCTGC...AGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | CCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTAGCCGGAGACTTCATTaGCAGAGAAGCACTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PHFHPRRHFYTCGFQIHASRRLH*QRSTVG Trigger: ACCAACAGTGCTTCTCTGCAAATGAAGTCTCCGGCT...AGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | TTCTTGGATGTTCCCCTCTGCCTCATCTTCCAGGCTCTTCAATTTCATATCATTGCAGCAACTTCAGCCTaGGGTCTTCCGACATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FLDVPLCLIFQALQFHIIAATSA*GLPTSL Trigger: TAAAGATGTCGGAAGACCCAAGGCTGAAGTTGCTGC...AATGATATGAAATTGAAGAGCCTGGAAGATGAGGCAGAGGGGAACATCCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGCTGCTCTTTAGGCCATaGCAACATCCTCACATACTC | + |
|
Preference number: 5 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQLLFRP*QHPHIL Trigger: GAGTATGTGAGGATGTTGCAATGGCCTAAAGAGCAG...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | CATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGATAGCCGGAGACTTCATTaGCAGAGAAGCACTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSSFPSQETFLHMWISDSRRLH*QRSTVG Trigger: ACCAACAGTGCTTCTCTGCAAATGAAGTCTCCGGCT...ATCTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGAGACATTTCTACACATGTGGATTTCAGATACACGCTGAGGAATATGCTAATGTTTTGGAAAGATaGGGCCTGGTTCGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRRHFYTCGFQIHAEEYANVLER*GLVRSS Trigger: TGAAGAACGAACCAGGCCCAATCTTTCCAAAACATT...AGCATATTCCTCAGCGTGTATCTGAAATCCACATGTGTAGAAATGTCTCCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATAGCACTTGTAGCTATCTaGAAAACCTCAGTGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: MKMLASPTPKFSLQEKLIALVAI*KTSVAH Trigger: GTGTGCCACTGAGGTTTTCAAGATAGCTACAAGTGC...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | GCCACACTAATGCTAAAAATGACACCAATTAAATTTCCTTTCTTGGATGTTCCCCTGCTCTTTAGGCCATaGCAACATCCTCACATACTC | + |
|
Preference number: 5 (lower is better) Translates to: ATLMLKMTPIKFPFLDVPLLFRP*QHPHIL Trigger: GAGTATGTGAGGATGTTGCAATGGCCTAAAGAGCAG...GGGAACATCCAAGAAAGGAAATTTAATTGGTGTCATTTTTAGCATTAGTGTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | GACATAGCTCCTCATTTCCATCCCAGGAGACATTTCTACACATGTGGATTTCAGAGTTCTTTTAATGTTTaGGAAAGATTGGGCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DIAPHFHPRRHFYTCGFQSSFNV*ERLGLV Trigger: AACCAGGCCCAATCTTTCCAAAACATTAAAAGAACT...CTGAAATCCACATGTGTAGAAATGTCTCCTGGGATGGAAATGAGGAGCTATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCAAGGTACAATGGAGCTaGGATCCAACACACCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISPEGIAFHSNKMKMLASKVQWS*DPTHHL Trigger: AAGATGGTGTGTTGGATCCAAGCTCCATTGTACCTT...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATTAATACACACATGGATAGTCACAATTATATGAGTAGCAATGAAGACACTGCCGCACTTGTAGCTATCTaGAAAACCTCAGTGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: INTHMDSHNYMSSNEDTAALVAI*KTSVAH Trigger: GTGTGCCACTGAGGTTTTCAAGATAGCTACAAGTGC...GGCAGTGTCTTCATTGCTACTCATATAATTGTGACTATCCATGTGTGTATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATAAATGTTTTGAGGAAGTaGGCTACATGCTGGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MKMLASPTPKFSLQEKLINVLRK*ATCWTV Trigger: AACTGTCCAGCATGTAGCCAACTTCCTCAAAACATT...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | TTCTTGGATGTTCCCCTCTGCCTCATCTTCCAGGCTCTTCAATTTCATATCATTAGTTCTTTTAATGTTTaGGAAAGATTGGGCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLDVPLCLIFQALQFHIISSFNV*ERLGLV Trigger: AACCAGGCCCAATCTTTCCAAAACATTAAAAGAACT...AATGATATGAAATTGAAGAGCCTGGAAGATGAGGCAGAGGGGAACATCCAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCAATGTTTTGGAAAGATaGGGCCTGGTTCGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISPEGIAFHSNKMKMLASNVLER*GLVRSS Trigger: TGAAGAACGAACCAGGCCCAATCTTTCCAAAACATT...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATGAAAATGCTTGCTAGCCCAACCCCAAAGTTCAGTCTTCAAGAGAAACTTATATCTCTCTATGGACTTTaGGAAAATCCACTGAATATG | + |
|
Preference number: 5 (lower is better) Translates to: MKMLASPTPKFSLQEKLISLYGL*ENPLNM Trigger: CATATTCAGTGGATTTTCCAAAAGTCCATAGAGAGA...TATAAGTTTCTCTTGAAGACTGAACTTTGGGGTTGGGCTAGCAAGCATTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATTAATACACACATGGATAGTCACAATTATATGAGTAGCAATGAAGACACTGCCAATGTTTTGAGGAAGTaGGCTACATGCTGGACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: INTHMDSHNYMSSNEDTANVLRK*ATCWTV Trigger: AACTGTCCAGCATGTAGCCAACTTCCTCAAAACATT...GGCAGTGTCTTCATTGCTACTCATATAATTGTGACTATCCATGTGTGTATTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCTGAAGGCATAGCTTTCCATAGTAATAAAATGAAAATGCTTGCTAGCTCTCTCTATGGACTTTaGGAAAATCCACTGAATATG | + |
|
Preference number: 5 (lower is better) Translates to: ISPEGIAFHSNKMKMLASSLYGL*ENPLNM Trigger: CATATTCAGTGGATTTTCCAAAAGTCCATAGAGAGA...GCTAGCAAGCATTTTCATTTTATTACTATGGAAAGCTATGCCTTCAGGAGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089287.7 ENSMUST00000164744.8 |
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