Pregenerated sensors for UAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026670Ensembl transcript IDs: ENSMUST00000027981.8, ENSMUST00000111350.10, ENSMUST00000111351.10
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCTTCAAGTGAAGTCATGCTGAACATCCAACCAGAGTCAAGCTaGCGAAGTTTCCTGGGTGGCCAATATGAGCCTTGGCTTGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: PASSEVMLNIQPESS*RSFLGGQYEPWLGR Trigger: TCTTCCAAGCCAAGGCTCATATTGGCCACCCAGGAAACTTCGTCAGCTTGACTCTGGTTGGATGTTCAGCATGACTTCACTTGAAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| 3UTR TCA 72 bp | TTCAGCTGTCCAGGACAGGTCCCACAGGTTCACAATTaGTCTACCAAAACAACGGCTCCCTATGTGGCCCGT | + |
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Preference number: 3 (lower is better) Translates to: FSCPGQVPQVHN*STKTTAPYVAR Trigger: ACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| 3UTR GCA 72 bp | ATGAACTCCAGTCATCTGGGTCTGGGAAGTCTGTGTTaGTTAGCAGACACTAGCAAGCGAATGAGACTCGAT | + |
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Preference number: 3 (lower is better) Translates to: MNSSHLGLGSLC*LADTSKRMRLD Trigger: ATCGAGTCTCATTCGCTTGCTAGTGTCTGCTAAGCAACACAGACTTCCCAGACCCAGATGACTGGAGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCAGTGTCCCCCGGCATTaGGGACCCAGCAGTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLSVPRH*GPSSGE Trigger: TTCACCACTGCTGGGTCCTCAATGCCGGGGGACACT...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCTGCAGCAGGTGCTCTTaGCCAGCTTGGGACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLCSRCS*PAWDSL Trigger: AAGGCTGTCCCAAGCTGGGCAAGAGCACCTGCTGCA...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAAGCACGGGGGATGGCTaGGAGGCGAGAGCCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGSTGDG*EARAIL Trigger: GAGAATGGCTCTCGCCTCCCAGCCATCCCCCGTGCT...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027981.8 |
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| CDS-3UTR CCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTACTGCGGGGGATGGCTaGGAGGCGAGAGCCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCTAGDG*EARAIL Trigger: GAGAATGGCTCTCGCCTCCCAGCCATCCCCCGCAGT...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111351.10 |
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| CDS-3UTR CCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGACAAGCGGGGGATGGCTaGGAGGCGAGAGCCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGQAGDG*EARAIL Trigger: GAGAATGGCTCTCGCCTCCCAGCCATCCCCCGCTTG...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111350.10 |
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| CDS-3UTR CCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGCTTTCAAGCGGGGGATaGCTGGGAGGCGAGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMLSSGG*LGGESH Trigger: ATGGCTCTCGCCTCCCAGCCATCCCCCGCTTGAAAG...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111350.10 |
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| 3UTR CAA 72 bp | CTTCAGCTGTCCAGGACAGGTCCCACAGGTTCACAATaGATCTACCAAAACAACGGCTCCCTATGTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LQLSRTGPTGSQ*IYQNNGSLCGP Trigger: CGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAAGTGTCCCCCGGCATTaGGGACCCAGCAGTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGSVPRH*GPSSGE Trigger: TTCACCACTGCTGGGTCCTCAATGCCGGGGGACACT...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGCAGCAGGTGCTCTTaGCCAGCTTGGGACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMCSRCS*PAWDSL Trigger: AAGGCTGTCCCAAGCTGGGCAAGAGCACCTGCTGCA...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGCAGCAGCCGTCCATCTaGACTTCGCCTTTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMQQPSI*TSPLSC Trigger: ACAGCTCAAAGGCGAAGTTCAGATGGACGGCTGCTG...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGAGGACCCAGCAGTGGTaGAGGGACATCAAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMRTQQW*RDIKAC Trigger: GCATGCTTTGATGTCCCTTCACCACTGCTGGGTCCT...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTTGCAGCAGGTGCTCTTaGCCAGCTTGGGACAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCCSRCS*PAWDSL Trigger: AAGGCTGTCCCAAGCTGGGCAAGAGCACCTGCTGCA...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCACAATGTTTTGGGCTaGAAGAGCCCGGTAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLHNVLG*KSPVET Trigger: GGTCTCTACCGGGCTCTTGCAGCCCAAAACATTGTG...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCTGCTCTTGCCCAGCTTaGGACAGCCTTTGTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLCSCPA*DSLCLR Trigger: CCTCAAACAAAGGCTGTCCCAAGCTGGGCAAGAGCA...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTCAGCAGCCGTCCATCTaGACTTCGCCTTTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCQQPSI*TSPLSC Trigger: ACAGCTCAAAGGCGAAGTTCAGATGGACGGCTGCTG...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTAGGACCCAGCAGTGGTaGAGGGACATCAAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCRTQQW*RDIKAC Trigger: GCATGCTTTGATGTCCCTTCACCACTGCTGGGTCCT...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCAGCTGTGATGGCCTCTaGCTTTCCATTTGTAGCACG | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLSCDGL*LSICST Trigger: CGTGCTACAAATGGAAAGTCAGAGGCCATCACAGCT...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027981.8 |
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| CDS-3UTR GCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCGCAGGCAGCATTCCCTaGTGGAAAAACACCACATTC | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLAGSIP*WKNTTF Trigger: GAATGTGGTGTTTTTCCAGCAGGGAATGCTGCCTGC...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCATCAAAGCATGCCTTaGTGTGGTCGGGTTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLHQSMP*CGRVVL Trigger: AAGGACAACCCGACCACAGCAAGGCATGCTTTGATG...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGAGGGACATCAAAGCATaGCTTGCTGTGGTCGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMRDIKA*LAVVGL Trigger: CAACCCGACCACAGCAAGGCATGCTTTGATGTCCCT...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGCTCTTGCCCAGCTTaGGACAGCCTTTGTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMCSCPA*DSLCLR Trigger: CCTCAAACAAAGGCTGTCCCAAGCTGGGCAAGAGCA...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAAAGCATGCCTTGCTGTaGTCGGGTTGTCCTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGKHALL*SGCPSR Trigger: ACGGGAAGGACAACCCGACCACAGCAAGGCATGCTT...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTAAGCATGCCTTGCTGTaGTCGGGTTGTCCTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCKHALL*SGCPSR Trigger: ACGGGAAGGACAACCCGACCACAGCAAGGCATGCTT...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGACATGCCCTTGGGATATaGGACTCCAAGTCTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGHALGI*DSKSCP Trigger: GGGACAAGACTTGGAGTCTCATATCCCAAGGGCATG...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCGAAGAACTCCTTCGTTaGTTCCATTGTTCTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLEELLR*FHCSAA Trigger: AGCGGCAGAACAATGGAATCAACGAAGGAGTTCTTC...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGACAATGTTCCCTGCATTaGACAGCAGCCGTCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGQCSLH*TAAVHL Trigger: CAGATGGACGGCTGCTGTTCAATGCAGGGAACATTG...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTCAATGTTCCCTGCATTaGACAGCAGCCGTCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCQCSLH*TAAVHL Trigger: CAGATGGACGGCTGCTGTTCAATGCAGGGAACATTG...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGGGGACAGTGAAGAAGTaGTTGGCAATGTTCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMGTVKK*LAMFPA Trigger: TGCAGGGAACATTGCCAATCACTTCTTCACTGTCCC...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCTCAGGAACGGGACAGTaGAGAAGTGATTGGCAATGT | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLSGTGQ*RSDWQC Trigger: ACATTGCCAATCACTTCTTCACTGTCCCGTTCCTGA...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTTGTCCTTCCCGTTCTaGCTGTCTGCATTCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMLSFPF*LSAFLS Trigger: GCTCAAGAATGCAGACAGTCAGAACGGGAAGGACAA...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAAGCTCATTCCAGAACTaGAGCAGGTGCTCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGSSFQN*SRCSCP Trigger: TGGGCAAGAGCACCTGCTGCAGTTCTGGAATGAGCT...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTAGCTCATTCCAGAACTaGAGCAGGTGCTCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCSSFQN*SRCSCP Trigger: TGGGCAAGAGCACCTGCTGCAGTTCTGGAATGAGCT...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGGCAGGCAGCATTCCCTaGTGGAAAAACACCACATTC | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMAGSIP*WKNTTF Trigger: GAATGTGGTGTTTTTCCAGCAGGGAATGCTGCCTGC...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGACACAATGTTTTGGGCTaGAAGAGCCCGGTAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGHNVLG*KSPVET Trigger: GGTCTCTACCGGGCTCTTGCAGCCCAAAACATTGTG...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTCACAATGTTTTGGGCTaGAAGAGCCCGGTAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCHNVLG*KSPVET Trigger: GGTCTCTACCGGGCTCTTGCAGCCCAAAACATTGTG...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCTTTCTCTACCACCTTTaGCCCACAGTCTGCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLFLYHL*PTVCSF Trigger: AAAGGAGCAGACTGTGGGGCAAAGGTGGTAGAGAAA...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR GCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAAGGGACATCAAAGCATaGCTTGCTGTGGTCGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGRDIKA*LAVVGL Trigger: CAACCCGACCACAGCAAGGCATGCTTTGATGTCCCT...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGGACAGTGAAGAAGTaGTTGGCAATGTTCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCGTVKK*LAMFPA Trigger: TGCAGGGAACATTGCCAATCACTTCTTCACTGTCCC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGGACTGTCTGCATTCTTaGGCGGGGAAAACTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMDCLHS*AGKTHL Trigger: AAGATGAGTTTTCCCCGCTCAAGAATGCAGACAGTC...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTTTGTCCTTCCCGTTCTaGCTGTCTGCATTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCLSFPF*LSAFLS Trigger: GCTCAAGAATGCAGACAGTCAGAACGGGAAGGACAA...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR TCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGAGCTGTGATGGCCTCTaGCTTTCCATTTGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMSCDGL*LSICST Trigger: AGTGCTACAAATGGAAAGTCAGAGGCCATCACAGCT...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAGCAGGCAGCATTCCCTaGTGGAAAAACACCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGAGSIP*WKNTTF Trigger: GAATGTGGTGTTTTTCCAGCAGGGAATGCTGCCTGC...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCATCATACATGCCCTTaGGATATGAGACTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLHHTCP*DMRLQV Trigger: GACTTGGAGTCTCATATCCCAAGGGCATGTATGATG...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCACCACCATTCCCATCTaGAGCCATAGACACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLTTIPI*SHRHFV Trigger: AACAAAGTGTCTATGGCTCCAGATGGGAATGGTGGT...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGAAGAACTCCTTCGTTaGTTCCATTGTTCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCEELLR*FHCSAA Trigger: AGCGGCAGAACAATGGAATCAACGAAGGAGTTCTTC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGATCAGGAACGGGACAGTaGAGAAGTGATTGGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGSGTGQ*RSDWQC Trigger: ACATTGCCAATCACTTCTTCACTGTCCCGTTCCTGA...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGACTGTCTGCATTCTTaGGCGGGGAAAACTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCDCLHS*AGKTHL Trigger: AAGATGAGTTTTCCCCGCTCAAGAATGCAGACAGTC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR TCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCGCATCTTTCAAGTTGTaGTTGACATCAGCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLASFKL*LTSAVM Trigger: CATCACAGCTGATGTCAATCACAACTTGAAAGATGC...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027981.8 ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTTTTCTCTACCACCTTTaGCCCACAGTCTGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCFLYHL*PTVCSF Trigger: AAAGGAGCAGACTGTGGGGCAAAGGTGGTAGAGAAA...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGATTTCTCTACCACCTTTaGCCCACAGTCTGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGFLYHL*PTVCSF Trigger: AAAGGAGCAGACTGTGGGGCAAAGGTGGTAGAGAAA...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGATCTGGCTTAATGAAGTaGCCCTGGGAGTCCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGSGLMK*PWESTY Trigger: ATATGTGGACTCCCAGGGGCACTTCATTAAGCCAGA...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCGCTCTTCAAAGTTCATaGCCTGGAGCTCCATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLALQSS*PGAPYK Trigger: TTTATATGGAGCTCCAGGCCATGAACTTTGAAGAGC...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGCCATTGTTCTGCCGCTaGTCATTATATACCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMPLFCR*SLYTMG Trigger: TCCCATGGTATATAATGACCAGCGGCAGAACAATGG...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGACCACCATTCCCATCTaGAGCCATAGACACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMTTIPI*SHRHFV Trigger: AACAAAGTGTCTATGGCTCCAGATGGGAATGGTGGT...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCTTGATTCCATTGTTCTaGCGCTGGTCATTATATACC | + |
|
Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLLIPLF*RWSLYT Trigger: GGTATATAATGACCAGCGGCAGAACAATGGAATCAA...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGATGGAACTCTTTATCTaGCACATAACCTTCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMMELFI*HITFKA Trigger: GGCCTTGAAGGTTATGTGGCAGATAAAGAGTTCCAT...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGACCATTGTTCTGCCGCTaGTCATTATATACCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGPLFCR*SLYTMG Trigger: TCCCATGGTATATAATGACCAGCGGCAGAACAATGG...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTCCATTGTTCTGCCGCTaGTCATTATATACCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCPLFCR*SLYTMG Trigger: TCCCATGGTATATAATGACCAGCGGCAGAACAATGG...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAACCACCATTCCCATCTaGAGCCATAGACACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGTTIPI*SHRHFV Trigger: AACAAAGTGTCTATGGCTCCAGATGGGAATGGTGGT...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR TCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGCATCTTTCAAGTTGTaGTTGACATCAGCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCASFKL*LTSAVM Trigger: CATCACAGCTGATGTCAATCACAACTTGAAAGATGC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027981.8 ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTATGGAACTCTTTATCTaGCACATAACCTTCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCMELFI*HITFKA Trigger: GGCCTTGAAGGTTATGTGGCAGATAAAGAGTTCCAT...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGCTCTTCAAAGTTCATaGCCTGGAGCTCCATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCALQSS*PGAPYK Trigger: TTTATATGGAGCTCCAGGCCATGAACTTTGAAGAGC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR GCA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTTTGATTCCATTGTTCTaGCGCTGGTCATTATATACC | + |
|
Preference number: 4 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCLIPLF*RWSLYT Trigger: GGTATATAATGACCAGCGGCAGAACAATGGAATCAA...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCATCTTTATTCCATTTaGCTTGTCTGGCTTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLHLYSI*LVWLNE Trigger: TTCATTAAGCCAGACAAGCCAAATGGAATAAAGATG...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGACATCTTTATTCCATTTaGCTTGTCTGGCTTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGHLYSI*LVWLNE Trigger: TTCATTAAGCCAGACAAGCCAAATGGAATAAAGATG...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGCTGCAGCAGGTGCTCTaGCCCAGCTTGGGACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMLQQVL*PSLGQP Trigger: AGGCTGTCCCAAGCTGGGCAAGAGCACCTGCTGCAG...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGACTGCAGCAGGTGCTCTaGCCCAGCTTGGGACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGLQQVL*PSLGQP Trigger: AGGCTGTCCCAAGCTGGGCAAGAGCACCTGCTGCAG...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTCTGCAGCAGGTGCTCTaGCCCAGCTTGGGACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCLQQVL*PSLGQP Trigger: AGGCTGTCCCAAGCTGGGCAAGAGCACCTGCTGCAG...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCTGCAGCTGCTCTaGATCTCTGGTAGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCGLQLL*ISGSTA Trigger: GGCAGTGCTACCAGAGATCAAGAGCAGCTGCAGGCC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAGGCCTGCAGCTGCTCTaGATCTCTGGTAGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGGLQLL*ISGSTA Trigger: GGCAGTGCTACCAGAGATCAAGAGCAGCTGCAGGCC...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCGTCCTCCACAATGTTTaGGGCTGCAAGAGCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLVLHNV*GCKSPV Trigger: TACCGGGCTCTTGCAGCCCAAAACATTGTGGAGGAC...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGGTGCTCTTGCCCAGCTaGGGACAGCCTTTGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMVLLPS*GQPLFE Trigger: CTCAAACAAAGGCTGTCCCAAGCTGGGCAAGAGCAC...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCGCAATGTTCCCTGCATaGAACAGCAGCCGTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLAMFPA*NSSRPS Trigger: AGATGGACGGCTGCTGTTCAATGCAGGGAACATTGC...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCACATCAAAGCATGCCTaGCTGTGGTCGGGTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLTSKHA*LWSGCP Trigger: AGGACAACCCGACCACAGCAAGGCATGCTTTGATGT...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS TCA 90 bp | GACATCAAAGCATGCCTTGCTGTGGTCGGGTTGTCCTTCCCGTTCTaGCTGTCTGCATTCTTGAGCGGGGAAAACTCATCTTCCCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: DIKACLAVVGLSFPF*LSAFLSGENSSSRN Trigger: ATTACGGGAAGATGAGTTTTCCCCGCTCAAGAATGCAGACAGTCAGAACGGGAAGGACAACCCGACCACAGCAAGGCATGCTTTGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGTGCTCTTGCCCAGCTaGGGACAGCCTTTGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCVLLPS*GQPLFE Trigger: CTCAAACAAAGGCTGTCCCAAGCTGGGCAAGAGCAC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAGTGCTCTTGCCCAGCTaGGGACAGCCTTTGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGVLLPS*GQPLFE Trigger: CTCAAACAAAGGCTGTCCCAAGCTGGGCAAGAGCAC...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCGGGATGGTGCACTTGTaGCCATGGTGTTTTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLGMVHL*PWCFSA Trigger: AGCTGAAAAACACCATGGCAACAAGTGCACCATCCC...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAGTCCTCCACAATGTTTaGGGCTGCAAGAGCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGVLHNV*GCKSPV Trigger: TACCGGGCTCTTGCAGCCCAAAACATTGTGGAGGAC...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGTCCTCCACAATGTTTaGGGCTGCAAGAGCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCVLHNV*GCKSPV Trigger: TACCGGGCTCTTGCAGCCCAAAACATTGTGGAGGAC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | GCTGTCCAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCTTTTCTCTACCACCTTaGCCCCACAGTCTGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: AVQDRSHRFTIDLPKQRLFSLPP*PHSLLL Trigger: AAGGAGCAGACTGTGGGGCAAAGGTGGTAGAGAAAA...GAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTTCGCCTTTGAGCTGTaGCCAGAGAGATCTCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMFAFEL*PERSRC Trigger: ACAGCGAGATCTCTCTGGCAACAGCTCAAAGGCGAA...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTACATCAAAGCATGCCTaGCTGTGGTCGGGTTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCTSKHA*LWSGCP Trigger: AGGACAACCCGACCACAGCAAGGCATGCTTTGATGT...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGGATGGTGCACTTGTaGCCATGGTGTTTTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCGMVHL*PWCFSA Trigger: AGCTGAAAAACACCATGGCAACAAGTGCACCATCCC...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | AGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTTTTTCTCTACCACCTTaGCCCCACAGTCTGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RTGPTGSQLIYQNNGSLCFSLPP*PHSLLL Trigger: AAGGAGCAGACTGTGGGGCAAAGGTGGTAGAGAAAA...ACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGATTTTCTCTACCACCTTaGCCCCACAGTCTGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGFSLPP*PHSLLL Trigger: AAGGAGCAGACTGTGGGGCAAAGGTGGTAGAGAAAA...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGAGCTTGGGACAGCCTTaGTTTGAGGTCATTGACATT | + |
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Preference number: 5 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMSLGQP*FEVIDI Trigger: AATGTCAATGACCTCAAACAAAGGCTGTCCCAAGCT...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | ACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGTGGCCCGTTAGGAAGCTTGGGACAGCCTTaGTTTGAGGTCATTGACATT | + |
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Preference number: 5 (lower is better) Translates to: TGSQLIYQNNGSLCGPLGSLGQP*FEVIDI Trigger: AATGTCAATGACCTCAAACAAAGGCTGTCCCAAGCT...TCCTAACGGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS-3UTR CAA 90 bp | CAGGACAGGTCCCACAGGTTCACAATTGATCTACCAAAACAACGGCTCCCTATGACACCACAAACTTCTTaGCAAACTGGAAGATGTCAA | + |
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Preference number: 5 (lower is better) Translates to: QDRSHRFTIDLPKQRLPMTPQTS*QTGRCQ Trigger: TTGACATCTTCCAGTTTGCAAAGAAGTTTGTGGTGT...CATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGGACCTGTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS CAA 72 bp | GGACCCAGCAGTGGTGAAGGGACATCAAAGCATGCCTaGCTGTGGTCGGGTTGTCCTTCCCGTTCTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: GPSSGEGTSKHA*LWSGCPSRSDC Trigger: ACAGTCAGAACGGGAAGGACAACCCGACCACAGCAAGGCATGCTTTGATGTCCCTTCACCACTGCTGGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS TCA 72 bp | GCATGCCTTGCTGTGGTCGGGTTGTCCTTCCCGTTCTaGCTGTCTGCATTCTTGAGCGGGGAAAACTCATCT | + |
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Preference number: 6 (lower is better) Translates to: ACLAVVGLSFPF*LSAFLSGENSS Trigger: AGATGAGTTTTCCCCGCTCAAGAATGCAGACAGTCAGAACGGGAAGGACAACCCGACCACAGCAAGGCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS CAA 72 bp | CTGCCGCTGGTCATTATATACCATGGGATGGTGCACTaGTTGCCATGGTGTTTTTCAGCTAACTGCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LPLVIIYHGMVH*LPWCFSANCWS Trigger: ACTCCAGCAGTTAGCTGAAAAACACCATGGCAACAAGTGCACCATCCCATGGTATATAATGACCAGCGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS CAA 72 bp | CCGCTGGTCATTATATACCATGGGATGGTGCACTTGTaGCCATGGTGTTTTTCAGCTAACTGCTGGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PLVIIYHGMVHL*PWCFSANCWSF Trigger: GAAACTCCAGCAGTTAGCTGAAAAACACCATGGCAACAAGTGCACCATCCCATGGTATATAATGACCAGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS GCA 72 bp | CGCTGGTCATTATATACCATGGGATGGTGCACTTGTTaGCATGGTGTTTTTCAGCTAACTGCTGGAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RWSLYTMGWCTC*HGVFQLTAGVS Trigger: TGAAACTCCAGCAGTTAGCTGAAAAACACCATGGCAACAAGTGCACCATCCCATGGTATATAATGACCAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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| CDS CCA 72 bp | CCTTTTCTTGGTGAGAGGATCGATCAAATTCACCAATaGCCTTCCGGAAAAAGGAGTTCAGCTCTTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: PFLGERIDQIHQ*PSGKRSSALQS Trigger: ACTTTGAAGAGCTGAACTCCTTTTTCCGGAAGGCCATTGGTGAATTTGATCGATCCTCTCACCAAGAAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027981.8 ENSMUST00000111350.10 ENSMUST00000111351.10 |
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