Pregenerated sensors for U2SURP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032407Ensembl transcript IDs: ENSMUST00000078374.13, ENSMUST00000079659.12, ENSMUST00000191213.7, ENSMUST00000217176.2
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCATCCACATCCTCCAGAGGCGCCCCGTCAAGCTCCTCCTCGATaGGAGCACCGTCAAGATCATCCGGCACATCCTCTGTTTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SHPHPPEAPRQAPPR*EHRQDHPAHPLFPF Trigger: AAAAGGAAACAGAGGATGTGCCGGATGATCTTGACGGTGCTCCCATCGAGGAGGAGCTTGACGGGGCGCCTCTGGAGGATGTGGATGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR TCA 90 bp | AGCGTCAGGTCCAGGCCACACAGCATTACCGTCTCTGTGGGACTGTaGTCAACAGTCACAAGTTTGCCTATTTCTTCCCCAGACCACAGC | + |
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Preference number: 1 (lower is better) Translates to: SVRSRPHSITVSVGL*STVTSLPISSPDHS Trigger: GCTGTGGTCTGGGGAAGAAATAGGCAAACTTGTGACTGTTGATCACAGTCCCACAGAGACGGTAATGCTGTGTGGCCTGGACCTGACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR TCA 90 bp | ATGAGACCTGTGTGGAGACCGGGACTGAGATCTGGATTTCTTCCCTaGTTTCTTAGGGGACCTAGAGCGAGAGCGCCTAGACCTTTTAGG | + |
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Preference number: 1 (lower is better) Translates to: MRPVWRPGLRSGFLP*FLRGPRARAPRPFR Trigger: CCTAAAAGGTCTAGGCGCTCTCGCTCTAGGTCCCCTAAGAAATCAGGGAAGAAATCCAGATCTCAGTCCCGGTCTCCACACAGGTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR TCA 90 bp | CCACCAGCCTTCCACGGCATCTGTCCCACTGCAGAGTACTTTAGCTaGGCCATGTCTACAAATCTGTCTTCTCTGCTATTTCAAATCAGA | + |
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Preference number: 1 (lower is better) Translates to: PPAFHGICPTAEYFS*AMSTNLSSLLFQIR Trigger: TCTGATTTGAAATAGCAGAGAAGACAGATTTGTAGACATGGCTCAGCTAAAGTACTCTGCAGTGGGACAGATGCCGTGGAAGGCTGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR CCA 90 bp | TCTCTATTGCCCAGGGTGGTCTCAACTTGTAAGCTTACCATCATGTaGCCTCAATGCTGGAATAACAAGTGGTGCCACTTGATTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: SLLPRVVSTCKLTIM*PQCWNNKWCHLIPL Trigger: CAGTGGAATCAAGTGGCACCACTTGTTATTCCAGCATTGAGGCCACATGATGGTAAGCTTACAAGTTGAGACCACCCTGGGCAATAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR GCA 90 bp | ACAGCATTACCGTCTCTGTGGGACTGTGATCAACAGTCACAAGTTTaGCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: TALPSLWDCDQQSQV*LFLPQTTAKFLPVY Trigger: ATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAACTTGTGACTGTTGATCACAGTCCCACAGAGACGGTAATGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR TCA 90 bp | GGTTCTTCTACAAACGCTTCTGTCTCTTGCTCCTCTGACATCCCATaGAGGTATGGATTTAAAGGTGGTGGCCTCCAAAAAGATCCATTT | + |
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Preference number: 1 (lower is better) Translates to: GSSTNASVSCSSDIP*RYGFKGGGLQKDPF Trigger: AAATGGATCTTTTTGGAGGCCACCACCTTTAAATCCATACCTTCATGGGATGTCAGAGGAGCAAGAGACAGAAGCGTTTGTAGAAGAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR GCA 90 bp | ATTGTAGTGATGCAGATGCAGACTCACAGAAAAACGGAACTACAGTaGCAAAGGAAAACTACCCTCACAACCCTCTTTAGTCACAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: IVVMQMQTHRKTELQ*QRKTTLTTLFSHRS Trigger: AGACCTGTGACTAAAGAGGGTTGTGAGGGTAGTTTTCCTTTGGCACTGTAGTTCCGTTTTTCTGTGAGTCTGCATCTGCATCACTACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR GCA 90 bp | CTCATTTCTCAAGCTTCTGTAGTTGTGCTGGATAAGGAAAAGACATaGCTTACTGTACAGCTGATAGGACTACTCCTCAAATCATGGGTA | + |
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Preference number: 1 (lower is better) Translates to: LISQASVVVLDKEKT*LTVQLIGLLLKSWV Trigger: TACCCATGATTTGAGGAGTAGTCCTATCAGCTGTACAGTAAGGCATGTCTTTTCCTTATCCAGCACAACTACAGAAGCTTGAGAAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR CCA 90 bp | AACTCGGGTACAGTGTTTCAATTTTGCAATGAAAGAGTTAGAGGTTaGATGCACAACAATGTGAGCGTACCTAACACCAGCAAACTGTAC | + |
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Preference number: 1 (lower is better) Translates to: NSGTVFQFCNERVRG*MHNNVSVPNTSKLY Trigger: GTACAGTTTGCTGGTGTTAGGTACGCTCACATTGTTGTGCATCCAACCTCTAACTCTTTCATTGCAAAATTGAAACACTGTACCCGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR TCA 90 bp | TTGCTCAGAAGATGGGCTGAGTGTTTTGAAGTCATGTTGCTTCTTTaGGAAAGAACTGTTTTAACCAGGCACTACAGTAACAGATACACA | + |
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Preference number: 1 (lower is better) Translates to: LLRRWAECFEVMLLL*ERTVLTRHYSNRYT Trigger: TGTGTATCTGTTACTGTAGTGCCTGGTTAAAACAGTTCTTTCTCAAAGAAGCAACATGACTTCAAAACACTCAGCCCATCTTCTGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR CCA 90 bp | AAGACATGCCTTACTGTACAGCTGATAGGACTACTCCTCAAATCATaGGTAGAAGACACCTTATTTTGTGACTGGGCAAGATTAAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: KTCLTVQLIGLLLKS*VEDTLFCDWARLSK Trigger: TTTACTTAATCTTGCCCAGTCACAAAATAAGGTGTCTTCTACCCATGATTTGAGGAGTAGTCCTATCAGCTGTACAGTAAGGCATGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR TCA 90 bp | AAACAAAACAGATATACTAAGGAGCTGATACTTATAGGTTGGAGGTaGGATGGCCACTGTTATATTCTGGGTTTGAAGTTTTTCTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: KQNRYTKELILIGWR*DGHCYILGLKFFSV Trigger: CACTGAGAAAAACTTCAAACCCAGAATATAACAGTGGCCATCTCACCTCCAACCTATAAGTATCAGCTCCTTAGTATATCTGTTTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | GACCCCATCCAGGTCATCGATGGGAGTGGCATCGATGGGAATCCCATCCACATCTGTCTCTTGCTCCTCTaGCATCCCATGAAGGTATGG | + |
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Preference number: 2 (lower is better) Translates to: DPIQVIDGSGIDGNPIHICLLLL*HPMKVW Trigger: CCATACCTTCATGGGATGTCAGAGGAGCAAGAGACA...GATGTGGATGGGATTCCCATCGATGCCACTCCCATCGATGACCTGGATGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR-3UTR GCA 90 bp | GACCCCATCCAGGTCATCGATGGGAGTGGCATCGATGGGAATCCCATCCACATCTGCCCAATCTTCCCATaGTCTGAAGCAGGTCATTAC | + |
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Preference number: 2 (lower is better) Translates to: DPIQVIDGSGIDGNPIHICPIFP*SEAGHY Trigger: GTAATGACCTGCTTCAGAGCATGGGAAGATTGGGCA...GATGTGGATGGGATTCCCATCGATGCCACTCCCATCGATGACCTGGATGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTAACATTGTAGGATGGTaGCAGAGCATTTCATACAAA | + |
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Preference number: 2 (lower is better) Translates to: ASLQREASGTTLEGDPFVNIVGW*QSISYK Trigger: TTTGTATGAAATGCTCTGTCACCATCCTACAATGTT...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTACAATATGGGTCCATTaGAGTAGAAAACACTACACA | + |
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Preference number: 2 (lower is better) Translates to: ASLQREASGTTLEGDPFVTIWVH*SRKHYT Trigger: TGTGTAGTGTTTTCTACTGCAATGGACCCATATTGT...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAGGGGACCTAGAGCGAGAGCGCCTAGACCTTTTAGGTGTCCTTGAACCAGTTTTCCTCTTCTTCTaGCTCTTCATGCTGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: FLGDLERERLDLLGVLEPVFLFF*LFMLVK Trigger: TTTGACCAGCATGAAGAGTCAGAAGAAGAGGAAAAC...TGGTTCAAGGACACCTAAAAGGTCTAGGCGCTCTCGCTCTAGGTCCCCTAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTGTAATAGCTACAATATaGGTCCATTGCAGTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: ASLQREASGTTLEGDPFVVIATI*VHCSRK Trigger: TTTTCTACTGCAATGGACCCATATTGTAGCTATTAC...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTAGATGCAGTTACTCATaGGTTTACACATGCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: VGTCYFCLSAERSKWHHARCSYS*VYTCIH Trigger: GTGAATGCATGTGTAAACTCATGAGTAACTGCATCT...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTAATGTAAAGCAATTATaGCGGGCTCATTTCTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: VGTCYFCLSAERSKWHHANVKQL*RAHFSS Trigger: GCTTGAGAAATGAGCCCGTCATAATTGCTTTACATT...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR CAA 90 bp | AAAGGAAAACTACCCTCACAACCCTCTTTAGTCACAGGTCTTTTGTaGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: KGKLPSQPSLVTGLL*EHVTSASLQREASG Trigger: GCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAACAAAAGACCTGTGACTAAAGAGGGTTGTGAGGGTAGTTTTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR CAA 90 bp | GCCAAAGGAAAACTACCCTCACAACCCTCTTTAGTCACAGGTCTTTaGTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: AKGKLPSQPSLVTGL*LEHVTSASLQREAS Trigger: ACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAACAAAAGACCTGTGACTAAAGAGGGTTGTGAGGGTAGTTTTCCTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR GCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGATAAGGAAAAGACATaGCTTACTGTACAGCTGATA | + |
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Preference number: 2 (lower is better) Translates to: VGTCYFCLSAERSKWHHADKEKT*LTVQLI Trigger: TATCAGCTGTACAGTAAGGCATGTCTTTTCCTTATC...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR CCA 90 bp | CTTCGAGAAGGGCTGGGGGAGGTACTATGTCGTCTCTTCCTTTCTTTTCTTGTTACATGGGCTGGTGTCTaGTTTTCAAATAAGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: LREGLGEVLCRLFLSFLVTWAGV*FSNKNL Trigger: CAGGTTCTTATTTGAAAACCAGACACCAGCCCATGT...AACAAGAAAAGAAAGGAAGAGACGACATAGTACCTCCCCCAGCCCTTCTCGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR CAA 90 bp | TTTACATTAGAGCTGCAGGAGGTGGTACTGAATAAACAGAGGCATTaGAACAGGCTCCCTTTCAACAGCAGCACATTCCCACCTCTTATT | + |
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Preference number: 2 (lower is better) Translates to: FTLELQEVVLNKQRH*NRLPFNSSTFPPLI Trigger: AATAAGAGGTGGGAATGTGCTGCTGTTGAAAGGGAGCCTGTTCAAATGCCTCTGTTTATTCAGTACCACCTCCTGCAGCTCTAATGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR GCA 90 bp | ACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGGTTCCCCCTAAATACGTTAATTaGTCAGAAGATGGGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TSSHRRKRLKEGLPYRVPPKYVN*SEDGLS Trigger: ACTCAGCCCATCTTCTGAGCAATTAACGTATTTAGG...GGGAACCCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | TCCATAACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGATAAACAGAGGCATTTaGACAGGCTCCCTTTCAACA | + |
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Preference number: 2 (lower is better) Translates to: SITSSHRRKRLKEGLPYRINRGI*TGSLST Trigger: TGTTGAAAGGGAGCCTGTTCAAATGCCTCTGTTTAT...CCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGTTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR GCA 90 bp | ACATTTACATTAGAGCTGCAGGAGGTGGTACTGAATAAACAGAGGCATTTGAACTTACTTCTGCCTCTCTaGAGAGAGAAGCAAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: TFTLELQEVVLNKQRHLNLLLPL*REKQVA Trigger: TGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAA...GTTCAAATGCCTCTGTTTATTCAGTACCACCTCCTGCAGCTCTAATGTAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR CCA 90 bp | CTTCGAGAAGGGCTGGGGGAGGTACTATGTCGTCTCTTCCTTTCTTTTCTTGTTTGTAATATGAAGCATTaGCAACTTTGGCTGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LREGLGEVLCRLFLSFLVCNMKH*QLWLKS Trigger: ACTCTTCAGCCAAAGTTGCCAATGCTTCATATTACA...AACAAGAAAAGAAAGGAAGAGACGACATAGTACCTCCCCCAGCCCTTCTCGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR-3UTR CCA 90 bp | CTATGTCGTCTCTTCCTTTCTTTTCTTGTTGGAGTACATTCATCCTTTTCCTTCTGTCCGCCATTTCGTTaGAGAATCTCCCTGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LCRLFLSFLVGVHSSFSFCPPFR*RISLQN Trigger: ATTCTGCAGGGAGATTCTCCAACGAAATGGCGGACA...GAAGGAAAAGGATGAATGTACTCCAACAAGAAAAGAAAGGAAGAGACGACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR-3UTR TCA 90 bp | CTATGTCGTCTCTTCCTTTCTTTTCTTGTTGGAGTACATTCATCCTTTTCCTTCTCAGACTTGGAGCTCTaGGTGTCTTCTTCATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LCRLFLSFLVGVHSSFSFSDLEL*VSSSSS Trigger: TGAAGATGAAGAAGACACTCAGAGCTCCAAGTCTGA...GAAGGAAAAGGATGAATGTACTCCAACAAGAAAAGAAAGGAAGAGACGACATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR-3UTR CCA 90 bp | TCCATAACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGAAACAAAGGACTGAATaGTACTTTCATGCTAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SITSSHRRKRLKEGLPYRKQRTE*YFHAKN Trigger: GTTCTTAGCATGAAAGTACCATTCAGTCCTTTGTTT...CCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGTTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGACTTTACAGAAATGAATaGGCAAAACCTACAGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRLYRNE*AKPTGV Trigger: TACTCCTGTAGGTTTTGCTCATTCATTTCTGTAAAG...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTAGATGCAGTTACTCATaGGTTTACACATGCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: CLSHNILKQNTTTASRSIRCSYS*VYTCIH Trigger: GTGAATGCATGTGTAAACTCATGAGTAACTGCATCT...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| 3UTR-3UTR GCA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAGTTTTGAAGTCATGTTaGTTCTTTGAGAAAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRVLKSC*FFEKEL Trigger: CAGTTCTTTCTCAAAGAAGCAACATGACTTCAAAAC...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAGATAAGAAACAGCAATaGTGCCAAATTCACTTAGTA | + |
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Preference number: 2 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRDKKQQ*CQIHLV Trigger: TACTAAGTGAATTTGGCACCATTGCTGTTTCTTATC...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR TCA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCGTCATGTTGCTTCTTTaGGAAAGAACTGTTTTAACC | + |
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Preference number: 2 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVVMLLL*ERTVLT Trigger: GGTTAAAACAGTTCTTTCTCAAAGAAGCAACATGAC...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR CCA 72 bp | GGACCCCATCCAGGTCATCGATGGGAGTGGCATCGATaGGAATCCCATCCACATCCTCCAGAGGCGCCCCGT | + |
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Preference number: 3 (lower is better) Translates to: GPHPGHRWEWHR*ESHPHPPEAPR Trigger: ACGGGGCGCCTCTGGAGGATGTGGATGGGATTCCCATCGATGCCACTCCCATCGATGACCTGGATGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTGATGGGCTGAGTGTTTaGAAGTCATGTTGCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: ASLQREASGTTLEGDPFVDGLSV*KSCCFF Trigger: AAAGAAGCAACATGACTTCAAAACACTCAGCCCATC...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR TCA 72 bp | TTTCTGATCCCATTAAGTTCCCAGGGACCCTGTTTCTaGGACAGGATCCCTCTCTATTGCCCAGGGTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: FLIPLSSQGPCF*DRIPLYCPGWS Trigger: AGACCACCCTGGGCAATAGAGAGGGATCCTGTCTCAGAAACAGGGTCCCTGGGAACTTAATGGGATCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR-3UTR CAA 90 bp | GACCCCATCCAGGTCATCGATGGGAGTGGCATCGATGGGAATCCCATCCACATCGAAGCATTGGCAACTTaGGCTGAAGAGTTGTATAAA | + |
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Preference number: 3 (lower is better) Translates to: DPIQVIDGSGIDGNPIHIEALAT*AEELYK Trigger: TTTATACAACTCTTCAGCCAAAGTTGCCAATGCTTC...GATGTGGATGGGATTCCCATCGATGCCACTCCCATCGATGACCTGGATGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| 3UTR TCA 72 bp | TCCAGGCCACACAGCATTACCGTCTCTGTGGGACTGTaGTCAACAGTCACAAGTTTGCCTATTTCTTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: SRPHSITVSVGL*STVTSLPISSP Trigger: TGGGGAAGAAATAGGCAAACTTGTGACTGTTGATCACAGTCCCACAGAGACGGTAATGCTGTGTGGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR CCA 72 bp | CCCAGGGTGGTCTCAACTTGTAAGCTTACCATCATGTaGCCTCAATGCTGGAATAACAAGTGGTGCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: PRVVSTCKLTIM*PQCWNNKWCHL Trigger: CAAGTGGCACCACTTGTTATTCCAGCATTGAGGCCACATGATGGTAAGCTTACAAGTTGAGACCACCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR GCA 72 bp | CCGTCTCTGTGGGACTGTGATCAACAGTCACAAGTTTaGCTATTTCTTCCCCAGACCACAGCCAAGTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: PSLWDCDQQSQV*LFLPQTTAKFL Trigger: AAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAACTTGTGACTGTTGATCACAGTCCCACAGAGACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR GCA 72 bp | TTTAGTCACAGGTCTTTTGTTGGAACATGTTACTTCTaGCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCT | + |
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Preference number: 3 (lower is better) Translates to: FSHRSFVGTCYF*LSAERSKWHHA Trigger: AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAACAAAAGACCTGTGACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| 3UTR TCA 72 bp | TTCCACGGCATCTGTCCCACTGCAGAGTACTTTAGCTaGGCCATGTCTACAAATCTGTCTTCTCTGCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FHGICPTAEYFS*AMSTNLSSLLF Trigger: AAATAGCAGAGAAGACAGATTTGTAGACATGGCTCAGCTAAAGTACTCTGCAGTGGGACAGATGCCGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR TCA 72 bp | ACAAACGCTTCTGTCTCTTGCTCCTCTGACATCCCATaGAGGTATGGATTTAAAGGTGGTGGCCTCCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TNASVSCSSDIP*RYGFKGGGLQK Trigger: TTTTTGGAGGCCACCACCTTTAAATCCATACCTTCATGGGATGTCAGAGGAGCAAGAGACAGAAGCGTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| 3UTR-3UTR CAA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCCAGGATCCCTCTCTATaGCCCAGGGTGGTCTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVQDPSL*PRVVST Trigger: AGTTGAGACCACCCTGGGCAATAGAGAGGGATCCTG...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTGTCTTTAAGATGGACAGCGACTCAGTAATGCAATCCACTATTTCTTCATCCCGCTGTTCTTCCTaGAGTGCTCCCTTCTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: RGVFKMDSDSVMQSTISSSRCSS*SAPFLL Trigger: TAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGGGA...TGAAGAAATAGTGGATTGCATTACTGAGTCGCTGTCCATCTTAAAGACACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| 3UTR GCA 72 bp | ATGCAGATGCAGACTCACAGAAAAACGGAACTACAGTaGCAAAGGAAAACTACCCTCACAACCCTCTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: MQMQTHRKTELQ*QRKTTLTTLFS Trigger: ACTAAAGAGGGTTGTGAGGGTAGTTTTCCTTTGGCACTGTAGTTCCGTTTTTCTGTGAGTCTGCATCTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR CCA 72 bp | CTTAGAGAACTTAGACTCAGTCGCCTCTTCTCTGACTaGGTTAGAGTACAAATGATGCTCTTCAGACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LRELRLSRLFSD*VRVQMMLFRLG Trigger: TCCAAGTCTGAAGAGCATCATTTGTACTCTAACCCAGTCAGAGAAGAGGCGACTGAGTCTAAGTTCTCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| 3UTR GCA 72 bp | CAAGCTTCTGTAGTTGTGCTGGATAAGGAAAAGACATaGCTTACTGTACAGCTGATAGGACTACTCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QASVVVLDKEKT*LTVQLIGLLLK Trigger: TTTGAGGAGTAGTCCTATCAGCTGTACAGTAAGGCATGTCTTTTCCTTATCCAGCACAACTACAGAAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR CCA 72 bp | CTTACTGTACAGCTGATAGGACTACTCCTCAAATCATaGGTAGAAGACACCTTATTTTGTGACTGGGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTVQLIGLLLKS*VEDTLFCDWAR Trigger: TCTTGCCCAGTCACAAAATAAGGTGTCTTCTACCCATGATTTGAGGAGTAGTCCTATCAGCTGTACAGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR-3UTR CAA 90 bp | CACAATCATGCAATTTCTCAGAACTTACACCACCATCAAGGCAAGTGTATAGGAGTCACAGGTCTTTTGTaGGAACATGTTACTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HNHAISQNLHHHQGKCIGVTGLL*EHVTSA Trigger: GGCAGAAGTAACATGTTCCAACAAAAGACCTGTGAC...TCCTATACACTTGCCTTGATGGTGGTGTAAGTTCTGAGAAATTGCATGATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR-3UTR CAA 90 bp | CACAATCATGCAATTTCTCAGAACTTACACCACCATCAAGGCAAGTGTATAGGACTGCCAGCAGATCCATaGGACATATTTCTGATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HNHAISQNLHHHQGKCIGLPADP*DIFLMK Trigger: TTTCATCAGAAATATGTCCAATGGATCTGCTGGCAG...TCCTATACACTTGCCTTGATGGTGGTGTAAGTTCTGAGAAATTGCATGATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR-3UTR CAA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCTCAACAGTCACAAGTTaGCCTATTTCTTCCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVSTVTS*PISSPD Trigger: GTCTGGGGAAGAAATAGGCAAACTTGTGACTGTTGA...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR TCA 72 bp | AGATGGGCTGAGTGTTTTGAAGTCATGTTGCTTCTTTaGGAAAGAACTGTTTTAACCAGGCACTACAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RWAECFEVMLLL*ERTVLTRHYSN Trigger: GTTACTGTAGTGCCTGGTTAAAACAGTTCTTTCTCAAAGAAGCAACATGACTTCAAAACACTCAGCCCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR TCA 72 bp | TACTTTCATGCTAAGAACCTCAATGTAAAGCAATTATaGCGGGCTCATTTCTCAAGCTTCTGTAGTTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YFHAKNLNVKQL*RAHFSSFCSCA Trigger: AGCACAACTACAGAAGCTTGAGAAATGAGCCCGTCATAATTGCTTTACATTGAGGTTCTTAGCATGAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR TCA 72 bp | AGATATACTAAGGAGCTGATACTTATAGGTTGGAGGTaGGATGGCCACTGTTATATTCTGGGTTTGAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RYTKELILIGWR*DGHCYILGLKF Trigger: AAACTTCAAACCCAGAATATAACAGTGGCCATCTCACCTCCAACCTATAAGTATCAGCTCCTTAGTATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR TCA 72 bp | GAAAGTCATTTTAGTAATTATAAAACACTAGCTACTTaGACACTGGAGCTTGTAAAGTGCACTAGGGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESHFSNYKTLAT*TLELVKCTRDK Trigger: CTTATCCCTAGTGCACTTTACAAGCTCCAGTGTTCAAGTAGCTAGTGTTTTATAATTACTAAAATGACTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTCAGTCCGGATGGAGGTaGGGGGAGCGTGTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLQREASGTTLEGDPFVQSGWR*GERVFH Trigger: ATGGAACACACGCTCCCCCCACCTCCATCCGGACTG...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTCTGACCATCAGAGTCTaGCTGAGGAGGCTCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ASLQREASGTTLEGDPFVLTIRV*LRRLKP Trigger: CGGTTTGAGCCTCCTCAGTCAGACTCTGATGGTCAG...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTCCATCAGAGTCTGACTaGGGAGGCTCAAACCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLQREASGTTLEGDPFVPSESD*GGSNRL Trigger: AAGTCGGTTTGAGCCTCCTCAGTCAGACTCTGATGG...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTATCGGTTCTTTGAACTaGCCTTCTGAGATCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLQREASGTTLEGDPFVIGSLN*PSEIRL Trigger: CAGGCGGATCTCAGAAGGCCAGTTCAAAGAACCGAT...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGGGGACCTAGAGCGAGAGCGCCTAGACCTTTTAGGTGTCCTTGAACCACTGACCATCAGAGTCTaGCTGAGGAGGCTCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: FLGDLERERLDLLGVLEPLTIRV*LRRLKP Trigger: CGGTTTGAGCCTCCTCAGTCAGACTCTGATGGTCAG...TGGTTCAAGGACACCTAAAAGGTCTAGGCGCTCTCGCTCTAGGTCCCCTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| 3UTR CAA 72 bp | CCAGGGACCCTGTTTCTGAGACAGGATCCCTCTCTATaGCCCAGGGTGGTCTCAACTTGTAAGCTTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGTLFLRQDPSL*PRVVSTCKLTI Trigger: GATGGTAAGCTTACAAGTTGAGACCACCCTGGGCAATAGAGAGGGATCCTGTCTCAGAAACAGGGTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTCGGCCTTTCATTGGATaGCTGATTTGGAGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLQREASGTTLEGDPFVRPFIG*LIWRIF Trigger: AAAAATCCTCCAAATCAGTCATCCAATGAAAGGCCG...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTCGATCTATTTCTTCTTaGAGGCACATCCATAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: ASLQREASGTTLEGDPFVRSISS*RHIHRT Trigger: CGTTCTATGGATGTGCCTTCAAGAAGAAATAGATCG...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | GACCCCATCCAGGTCATCGATGGGAGTGGCATCGATGGGAATCCCATCCACATCCGATCTATTTCTTCTTaGAGGCACATCCATAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: DPIQVIDGSGIDGNPIHIRSISS*RHIHRT Trigger: CGTTCTATGGATGTGCCTTCAAGAAGAAATAGATCG...GATGTGGATGGGATTCCCATCGATGCCACTCCCATCGATGACCTGGATGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR TCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTCCTTTTAGGTGTCCTTaGACCAGACGGCGACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTCYFCLSAERSKWHHAPFRCP*TRRRPF Trigger: AAAAGGTCGCCGTCTGGTTCAAGGACACCTAAAAGG...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTGGAAGGGGATCCCTTTGTTACTTTGACTATGGCTTaGGACAGAGTCTTCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLQREASGTTLEGDPFVTLTMA*DRVFSK Trigger: TTTCGAGAAGACTCTGTCGCAAGCCATAGTCAAAGT...AACAAAGGGATCCCCTTCCAGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGGGGACCTAGAGCGAGAGCGCCTAGACCTTTTAGGTGTCCTTGAACCAATCGGTTCTTTGAACTaGCCTTCTGAGATCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLGDLERERLDLLGVLEPIGSLN*PSEIRL Trigger: CAGGCGGATCTCAGAAGGCCAGTTCAAAGAACCGAT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGCTCTCGCTCTAGGTCCCCTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| 3UTR CAA 72 bp | GAGCTGCAGGAGGTGGTACTGAATAAACAGAGGCATTaGAACAGGCTCCCTTTCAACAGCAGCACATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQEVVLNKQRH*NRLPFNSSTFP Trigger: TGGGAATGTGCTGCTGTTGAAAGGGAGCCTGTTCAAATGCCTCTGTTTATTCAGTACCACCTCCTGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTTCAGACTTGGAGCTCTaGGTGTCTTCTTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGTCYFCLSAERSKWHHASDLEL*VSSSSS Trigger: TGAAGATGAAGAAGACACTCAGAGCTCCAAGTCTGA...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | CCGCTGTTCTTCCTTGAGTGCTCCCTTCTTACTAGGTTCTTCTACAAACGCTTCAATCGCTCTCTAGGCTaGGCATTAAAAGGCAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLFFLECSLLTRFFYKRFNRSLG*ALKGSP Trigger: CGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGATT...GAAGCGTTTGTAGAAGAACCTAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CCA 90 bp | GACCCCATCCAGGTCATCGATGGGAGTGGCATCGATGGGAATCCCATCCACATCAATGTATATTGGATGTaGAGGAATAGGCACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DPIQVIDGSGIDGNPIHINVYWM*RNRHSF Trigger: AAAGCTGTGCCTATTCCTCCACATCCAATATACATT...GATGTGGATGGGATTCCCATCGATGCCACTCCCATCGATGACCTGGATGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR TCA 90 bp | TCTAACTTATCCCGCTGTTCTTCCTTGAGTGCTCCCTTCTTACTAGGTTCTTCTTTTGAACTGGCCTTCTaGGATCCGCCTGGCGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNLSRCSSLSAPFLLGSSFELAF*DPPGVL Trigger: CAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAAA...AGAAGAACCTAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGGGATAAGTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR GCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTATAAATTTCGGCCGCTaGCTTCTCATCCTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTCYFCLSAERSKWHHAINFGR*LLILLF Trigger: AAAAAGGAGGATGAGAAGGCAGCGGCCGAAATTTAT...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTTCTTCTGACTCTTCATaGTGGTCAAATAACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGTCYFCLSAERSKWHHASSDSS*WSNNSH Trigger: GTGGGAGTTATTTGACCAGCATGAAGAGTCAGAAGA...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGCAGTCCGGATGGAGGTaGGGGGAGCGTGTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWQSGWR*GERVFH Trigger: ATGGAACACACGCTCCCCCCACCTCCATCCGGACTG...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTATGTCGTCTCTTCCTTTCTTTTCTTGTTGGAGTACATTCATCCTTTTCCTTCCAGTCCGGATGGAGGTaGGGGGAGCGTGTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCRLFLSFLVGVHSSFSFQSGWR*GERVFH Trigger: ATGGAACACACGCTCCCCCCACCTCCATCCGGACTG...GAAGGAAAAGGATGAATGTACTCCAACAAGAAAAGAAAGGAAGAGACGACATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CCA 90 bp | ACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGGTTCCCTTTATGAGACCTGTGTaGAGACCGGGACTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSHRRKRLKEGLPYRVPFMRPV*RPGLRS Trigger: AGATCTCAGTCCCGGTCTCCACACAGGTCTCATAAA...GGGAACCCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | CTTCGAGAAGGGCTGGGGGAGGTACTATGTCGTCTCTTCCTTTCTTTTCTTGTTATCTCCTACATCATGTaGGCCAGGTGCATAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LREGLGEVLCRLFLSFLVISYIM*ARCIII Trigger: GATGATTATGCACCTGGCTCACATGATGTAGGAGAT...AACAAGAAAAGAAAGGAAGAGACGACATAGTACCTCCCCCAGCCCTTCTCGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CCA 90 bp | CCGCTGTTCTTCCTTGAGTGCTCCCTTCTTACTAGGTTCTTCTACAAACGCTTCAGGCGGAATGTATATTaGATGTGGAGGAATAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLFFLECSLLTRFFYKRFRRNVY*MWRNRH Trigger: GTGCCTATTCCTCCACATCCAATATACATTCCGCCT...GAAGCGTTTGTAGAAGAACCTAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR TCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACACTGACCATCAGAGTCTaGCTGAGGAGGCTCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTLTIRV*LRRLKP Trigger: CGGTTTGAGCCTCCTCAGTCAGACTCTGATGGTCAG...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | TCCATAACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGTGCCCAATCTTCCCATaGTCTGAAGCAGGTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SITSSHRRKRLKEGLPYRCPIFP*SEAGHY Trigger: GTAATGACCTGCTTCAGAGCATGGGAAGATTGGGCA...CCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGTTATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTTGTAATATGAAGCATTaGCAACTTTGGCTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGTCYFCLSAERSKWHHACNMKH*QLWLKS Trigger: ACTCTTCAGCCAAAGTTGCCAATGCTTCATATTACA...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACATTTGAACTGGCCTTCTaGGATCCGCCTGGCGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTFELAF*DPPGVL Trigger: CAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAAA...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGTTTGAACTGGCCTTCTaGGATCCGCCTGGCGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWFELAF*DPPGVL Trigger: CAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAAA...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACACCATCAGAGTCTGACTaGGGAGGCTCAAACCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTPSESD*GGSNRL Trigger: AAGTCGGTTTGAGCCTCCTCAGTCAGACTCTGATGG...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | CTATGTCGTCTCTTCCTTTCTTTTCTTGTTGGAGTACATTCATCCTTTTCCTTCCCATCAGAGTCTGACTaGGGAGGCTCAAACCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LCRLFLSFLVGVHSSFSFPSESD*GGSNRL Trigger: AAGTCGGTTTGAGCCTCCTCAGTCAGACTCTGATGG...GAAGGAAAAGGATGAATGTACTCCAACAAGAAAAGAAAGGAAGAGACGACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGTGTGGAGACCGGGACTaGGATCTGGATTTCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWCGDRD*DLDFFP Trigger: AGGGAAGAAATCCAGATCTCAGTCCCGGTCTCCACA...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACATGTCTCTTGCTCCTCTaGCATCCCATGAAGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTCLLLL*HPMKVW Trigger: CCATACCTTCATGGGATGTCAGAGGAGCAAGAGACA...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGTGTCTCTTGCTCCTCTaGCATCCCATGAAGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWCLLLL*HPMKVW Trigger: CCATACCTTCATGGGATGTCAGAGGAGCAAGAGACA...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGAATCGCTCTCTAGGCTaGGCATTAAAAGGCAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWNRSLG*ALKGSP Trigger: CGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGATT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CCGCTGTTCTTCCTTGAGTGCTCCCTTCTTACTAGGTTCTTCTACAAACGCTTCATAATTGTGTTTTCTTaGGCTTTTAGGTCGTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLFFLECSLLTRFFYKRFIIVFS*AFRSCS Trigger: CGAACACGACCTAAAAGCCCAAGAAAACACAATTAT...GAAGCGTTTGTAGAAGAACCTAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR TCA 90 bp | ACATTTACATTAGAGCTGCAGGAGGTGGTACTGAATAAACAGAGGCATTTGAACTCTGGATTTCTTCCCTaGTTTCTTAGGGGACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFTLELQEVVLNKQRHLNSGFLP*FLRGPR Trigger: TCTAGGTCCCCTAAGAAATCAGGGAAGAAATCCAGA...GTTCAAATGCCTCTGTTTATTCAGTACCACCTCCTGCAGCTCTAATGTAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCTGTGGAGACCGGGACTaGGATCTGGATTTCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFCGDRD*DLDFFP Trigger: AGGGAAGAAATCCAGATCTCAGTCCCGGTCTCCACA...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTATCGGTTCTTTGAACTaGCCTTCTGAGATCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNILKQNTTTASRSIIGSLN*PSEIRL Trigger: CAGGCGGATCTCAGAAGGCCAGTTCAAAGAACCGAT...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAATGGCGGCCTTTCATTaGATGACTGATTTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRMAAFH*MTDLED Trigger: ATCCTCCAAATCAGTCATCCAATGAAAGGCCGCCAT...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGTCTTTAAGATGGACAGCGACTCAGTAATGCAATCCACTATTTCTTCAATGGCGGCCTTTCATTaGATGACTGATTTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGVFKMDSDSVMQSTISSMAAFH*MTDLED Trigger: ATCCTCCAAATCAGTCATCCAATGAAAGGCCGCCAT...TGAAGAAATAGTGGATTGCATTACTGAGTCGCTGTCCATCTTAAAGACACCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAAGGCGGAATGTATATTaGATGTGGAGGAATAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRRRNVY*MWRNRH Trigger: GTGCCTATTCCTCCACATCCAATATACATTCCGCCT...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGTGTCCGCCATTTCGTTaGAGAATCTCCCTGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWCPPFR*RISLQN Trigger: ATTCTGCAGGGAGATTCTCCAACGAAATGGCGGACA...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGACGCCTCTTCTCTGACTaGGTTAGAGTACAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRRLFSD*VRVQMM Trigger: CATCATTTGTACTCTAACCCAGTCAGAGAAGAGGCG...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | ACATTTACATTAGAGCTGCAGGAGGTGGTACTGAATAAACAGAGGCATTTGAACTGCTCTACTTGTTCCTaGAAGCTTTGGCCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFTLELQEVVLNKQRHLNCSTCS*KLWPGF Trigger: AAAACCAGGCCAAAGCTTCCAGGAACAAGTAGAGCA...GTTCAAATGCCTCTGTTTATTCAGTACCACCTCCTGCAGCTCTAATGTAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR CAA 72 bp | TCTTCACAAATACCTGGCATTCAAGTTTTTGTAGGCTaGTCCACTCAAAGTCAGAAGAGGGGAACAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSQIPGIQVFVG*STQSQKRGTTN Trigger: GTTTGTTGTTCCCCTCTTCTGACTTTGAGTGGACAAGCCTACAAAAACTTGAATGCCAGGTATTTGTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| 3UTR CAA 72 bp | ACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATaGCCATATAGGGTTCCCATTAGAAAACAGTATACA | + |
|
Preference number: 4 (lower is better) Translates to: TSSHRRKRLKEG*PYRVPIRKQYT Trigger: TGTATACTGTTTTCTAATGGGAACCCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGTCTTTAAGATGGACAGCGACTCAGTAATGCAATCCACTATTTCTTCACGGCCTTTCATTGGATaGCTGATTTGGAGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGVFKMDSDSVMQSTISSRPFIG*LIWRIF Trigger: AAAAATCCTCCAAATCAGTCATCCAATGAAAGGCCG...TGAAGAAATAGTGGATTGCATTACTGAGTCGCTGTCCATCTTAAAGACACCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGATCTCCTACATCATGTaGGCCAGGTGCATAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWISYIM*ARCIII Trigger: GATGATTATGCACCTGGCTCACATGATGTAGGAGAT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGTCAGACTTGGAGCTCTaGGTGTCTTCTTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWSDLEL*VSSSSS Trigger: TGAAGATGAAGAAGACACTCAGAGCTCCAAGTCTGA...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCCCTTTTAGGTGTCCTTaGACCAGACGGCGACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFPFRCP*TRRRPF Trigger: AAAAGGTCGCCGTCTGGTTCAAGGACACCTAAAAGG...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGTCTTTAAGATGGACAGCGACTCAGTAATGCAATCCACTATTTCTTCAATAAATTTCGGCCGCTaGCTTCTCATCCTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGVFKMDSDSVMQSTISSINFGR*LLILLF Trigger: AAAAAGGAGGATGAGAAGGCAGCGGCCGAAATTTAT...TGAAGAAATAGTGGATTGCATTACTGAGTCGCTGTCCATCTTAAAGACACCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGCTGTTCTTCCTTGAGTaGTCCCTTCTTACTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWLFFLE*SLLTRF Trigger: GAACCTAGTAAGAAGGGAGCACTCAAGGAAGAACAG...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCCATAACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGATAATTGTGTTTTCTTaGGCTTTTAGGTCGTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SITSSHRRKRLKEGLPYRIIVFS*AFRSCS Trigger: CGAACACGACCTAAAAGCCCAAGAAAACACAATTAT...CCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGTTATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCCATAACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGAATGTATATTGGATGTaGAGGAATAGGCACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SITSSHRRKRLKEGLPYRNVYWM*RNRHSF Trigger: AAAGCTGTGCCTATTCCTCCACATCCAATATACATT...CCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGTTATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGAGGCGGAATGTATATTaGATGTGGAGGAATAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWRRNVY*MWRNRH Trigger: GTGCCTATTCCTCCACATCCAATATACATTCCGCCT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAACATGGGCTGGTGTCTaGTTTTCAAATAAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRTWAGV*FSNKNL Trigger: CAGGTTCTTATTTGAAAACCAGACACCAGCCCATGT...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAATTCAATGTCCGCCATTTCGTTaGAGAATCTCCCTGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLPQTTAKFLPVYKRIQCPPFR*RISLQN Trigger: ATTCTGCAGGGAGATTCTCCAACGAAATGGCGGACA...TTGAATTCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACAGATGCTCTTCAGACTTaGAGCTCTGAGTGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTDALQT*SSECLL Trigger: AAGAAGACACTCAGAGCTCCAAGTCTGAAGAGCATC...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGCGCCTCTTCTCTGACTaGGTTAGAGTACAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWRLFSD*VRVQMM Trigger: CATCATTTGTACTCTAACCCAGTCAGAGAAGAGGCG...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGACCGGGACTGAGATCTaGATTTCTTCCCTGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWTGTEI*ISSLIS Trigger: AGAAATCAGGGAAGAAATCCAGATCTCAGTCCCGGT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTTTTATGAGACCTGTGTaGAGACCGGGACTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNILKQNTTTASRSIFMRPV*RPGLRS Trigger: AGATCTCAGTCCCGGTCTCCACACAGGTCTCATAAA...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGCGATCTATTTCTTCTTaGAGGCACATCCATAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWRSISS*RHIHRT Trigger: CGTTCTATGGATGTGCCTTCAAGAAGAAATAGATCG...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGTCCTCTGACATCCCATaGAGGTATGGATTTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWSSDIP*RYGFKG Trigger: ACCTTTAAATCCATACCTTCATGGGATGTCAGAGGA...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGATAAATTTCGGCCGCTaGCTTCTCATCCTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWINFGR*LLILLF Trigger: AAAAAGGAGGATGAGAAGGCAGCGGCCGAAATTTAT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGACTTTGACTATGGCTTaGGACAGAGTCTTCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWTLTMA*DRVFSK Trigger: TTTCGAGAAGACTCTGTCGCAAGCCATAGTCAAAGT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCTGCCCAATCTTCCCATaGTCTGAAGCAGGTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFCPIFP*SEAGHY Trigger: GTAATGACCTGCTTCAGAGCATGGGAAGATTGGGCA...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACATCTTCTGACTCTTCATaGTGGTCAAATAACTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTSSDSS*WSNNSH Trigger: GTGGGAGTTATTTGACCAGCATGAAGAGTCAGAAGA...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTATGGCGGCCTTTCATTaGATGACTGATTTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNILKQNTTTASRSIMAAFH*MTDLED Trigger: ATCCTCCAAATCAGTCATCCAATGAAAGGCCGCCAT...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CACAATCATGCAATTTCTCAGAACTTACACCACCATCAAGGCAAGTGTATAGGACATAGCTTCAAACATTaGCCCTTCACGTACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HNHAISQNLHHHQGKCIGHSFKH*PFTYNK Trigger: TTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATG...TCCTATACACTTGCCTTGATGGTGGTGTAAGTTCTGAGAAATTGCATGATTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACAACATGGGCTGGTGTCTaGTTTTCAAATAAGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTTWAGV*FSNKNL Trigger: CAGGTTCTTATTTGAAAACCAGACACCAGCCCATGT...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CACAATCATGCAATTTCTCAGAACTTACACCACCATCAAGGCAAGTGTATAGGAATCTGGCAATCTTCTTaGGAAGAGGTGTCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNHAISQNLHHHQGKCIGIWQSS*EEVSLR Trigger: TCTTAAAGACACCTCTTCCCAAGAAGATTGCCAGAT...TCCTATACACTTGCCTTGATGGTGGTGTAAGTTCTGAGAAATTGCATGATTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACACTTTGTGAGAGGATCTaGACCGAGAACTTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTLCERI*TENFLC Trigger: ACAAAGAAAGTTCTCGGTCCAGATCCTCTCACAAAG...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAATTCAAACCGGGACTGAGATCTaGATTTCTTCCCTGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLPQTTAKFLPVYKRIQTGTEI*ISSLIS Trigger: AGAAATCAGGGAAGAAATCCAGATCTCAGTCCCGGT...TTGAATTCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGAAGATCCAGATGAATaGACATCTGATGATCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNILKQNTTTASRSIEDPDE*TSDDRF Trigger: GAACCGATCATCAGATGTTCATTCATCTGGATCTTC...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTCGGCCTTTCATTGGATaGCTGATTTGGAGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNILKQNTTTASRSIRPFIG*LIWRIF Trigger: AAAAATCCTCCAAATCAGTCATCCAATGAAAGGCCG...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATCTCCTACATCATGTaGGCCAGGTGCATAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFISYIM*ARCIII Trigger: GATGATTATGCACCTGGCTCACATGATGTAGGAGAT...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCTCCTCTGACATCCCATaGAGGTATGGATTTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVSSDIP*RYGFKG Trigger: ACCTTTAAATCCATACCTTCATGGGATGTCAGAGGA...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | CACAATCATGCAATTTCTCAGAACTTACACCACCATCAAGGCAAGTGTATAGGAAAATTTCCTGTAATATaGAGCATTGGCAACTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNHAISQNLHHHQGKCIGKFPVI*SIGNFG Trigger: GCCAAAGTTGCCAATGCTTCATATTACAGGAAATTT...TCCTATACACTTGCCTTGATGGTGGTGTAAGTTCTGAGAAATTGCATGATTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCTCTGGATTTCTTCCCTaGTTTCTTAGGGGACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFSGFLP*FLRGPR Trigger: TCTAGGTCCCCTAAGAAATCAGGGAAGAAATCCAGA...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | CACAATCATGCAATTTCTCAGAACTTACACCACCATCAAGGCAAGTGTATAGGACAAACCGACTTAACCTaGCTTTTGTTTTATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HNHAISQNLHHHQGKCIGQTDLT*LLFYVS Trigger: AGAGACATAAAACAAAAGGCAGGTTAAGTCGGTTTG...TCCTATACACTTGCCTTGATGGTGGTGTAAGTTCTGAGAAATTGCATGATTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACACATAGCTTCAAACATTaGCCCTTCACGTACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTHSFKH*PFTYNK Trigger: TTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATG...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGATCTGGCAATCTTCTTaGGAAGAGGTGTCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWIWQSS*EEVSLR Trigger: TCTTAAAGACACCTCTTCCCAAGAAGATTGCCAGAT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACATCTGACTCTTCATGCTaGTCAAATAACTCCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTSDSSC*SNNSHL Trigger: TAAGTGGGAGTTATTTGACCAGCATGAAGAGTCAGA...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCGATGCTCTTCAGACTTaGAGCTCTGAGTGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFDALQT*SSECLL Trigger: AAGAAGACACTCAGAGCTCCAAGTCTGAAGAGCATC...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCTGCTCTACTTGTTCCTaGAAGCTTTGGCCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFCSTCS*KLWPGF Trigger: AAAACCAGGCCAAAGCTTCCAGGAACAAGTAGAGCA...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCCTTTGTGAGAGGATCTaGACCGAGAACTTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVLCERI*TENFLC Trigger: ACAAAGAAAGTTCTCGGTCCAGATCCTCTCACAAAG...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCGAAGATCCAGATGAATaGACATCTGATGATCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFEDPDE*TSDDRF Trigger: GAACCGATCATCAGATGTTCATTCATCTGGATCTTC...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCGTTTTCCTCTTCTTCTaGCTCTTCATGCTGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFVFLFF*LFMLVK Trigger: TTTGACCAGCATGAAGAGTCAGAAGAAGAGGAAAAC...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR GCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACACAAACCGACTTAACCTaGCTTTTGTTTTATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTQTDLT*LLFYVS Trigger: AGAGACATAAAACAAAAGGCAGGTTAAGTCGGTTTG...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGAATGTATATTGGATGTaGAGGAATAGGCACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWNVYWM*RNRHSF Trigger: AAAGCTGTGCCTATTCCTCCACATCCAATATACATT...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAATTCAATCTGACTCTTCATGCTaGTCAAATAACTCCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFLPQTTAKFLPVYKRIQSDSSC*SNNSHL Trigger: TAAGTGGGAGTTATTTGACCAGCATGAAGAGTCAGA...TTGAATTCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACAAAACCAAATATAATCTaGCAATCTTCTTGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPADPLDIFLMKFISTKPNII*QSSWEE Trigger: CTCTTCCCAAGAAGATTGCCAGATTATATTTGGTTT...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTTGTAATATGAAGCATTaGCAACTTTGGCTGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNILKQNTTTASRSICNMKH*QLWLKS Trigger: ACTCTTCAGCCAAAGTTGCCAATGCTTCATATTACA...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR TCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCAAATTTCCTGTAATATaGAGCATTGGCAACTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFKFPVI*SIGNFG Trigger: GCCAAAGTTGCCAATGCTTCATATTACAGGAAATTT...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTCCTTTCTTTTCTTGTTaGAGTACATTCATCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNILKQNTTTASRSIPFFSC*STFILF Trigger: GAAAAGGATGAATGTACTCCAACAAGAAAAGAAAGG...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| 3UTR CAA 72 bp | AAATACGTTAATTGCTCAGAAGATGGGCTGAGTGTTTaGAAGTCATGTTGCTTCTTTGAGAAAGAACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KYVNCSEDGLSV*KSCCFFEKELF Trigger: AAACAGTTCTTTCTCAAAGAAGCAACATGACTTCAAAACACTCAGCCCATCTTCTGAGCAATTAACGTATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCAAACCAAATATAATCTaGCAATCTTCTTGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFKPNII*QSSWEE Trigger: CTCTTCCCAAGAAGATTGCCAGATTATATTTGGTTT...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CCA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCCCTTTCTTTTCTTGTTaGAGTACATTCATCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKILLLPADPLDIFLMKFPFFSC*STFILF Trigger: GAAAAGGATGAATGTACTCCAACAAGAAAAGAAAGG...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | GACCCCATCCAGGTCATCGATGGGAGTGGCATCGATGGGAATCCCATCCACATCTTTCTAGAAGAGGTCTaGAGAGATTCTGATGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DPIQVIDGSGIDGNPIHIFLEEV*RDSDEE Trigger: CTCCTCATCAGAATCTCTCAAGACCTCTTCTAGAAA...GATGTGGATGGGATTCCCATCGATGCCACTCCCATCGATGACCTGGATGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGGGGACCTAGAGCGAGAGCGCCTAGACCTTTTAGGTGTCCTTGAACCATACTTAGGGTTCGCTTaGCTGTGCTCATTTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLGDLERERLDLLGVLEPYLGFA*LCSFFQ Trigger: TTGGAAAAATGAGCACAGCAAAGCGAACCCTAAGTA...TGGTTCAAGGACACCTAAAAGGTCTAGGCGCTCTCGCTCTAGGTCCCCTAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CAA 90 bp | ACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGGTTCCCGTTGGGATAACCACTTaGACTATGGCTTGCGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSSHRRKRLKEGLPYRVPVGITT*TMACDR Trigger: TCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAAC...GGGAACCCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | TCCATAACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGTCCCGCTGTTCTTCCTaGAGTGCTCCCTTCTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: SITSSHRRKRLKEGLPYRSRCSS*SAPFLL Trigger: TAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGGGA...CCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGTTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | GTTGGAACATGTTACTTCTGCCTCTCTGCAGAGAGAAGCAAGTGGCACCACGCTCAATATCATTTTTCCTaGGAGTTAATCCTCGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGTCYFCLSAERSKWHHAQYHFS*ELILAR Trigger: TCTTGCGAGGATTAACTCCAAGGAAAAATGATATTG...AGCGTGGTGCCACTTGCTTCTCTCTGCAGAGAGGCAGAAGTAACATGTTCCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | ACTAGTTCGCACAGGAGAAAACGGCTGAAAGAAGGATTGCCATATAGGGTTCCCTCATCCTTTTCCTTCTaGTCTTTGGATCGAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSHRRKRLKEGLPYRVPSSFSF*SLDRDS Trigger: GGAATCTCGATCCAAAGACAAGAAGGAAAAGGATGA...GGGAACCCTATATGGCAATCCTTCTTTCAGCCGTTTTCTCCTGTGCGAACTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | CTTCGAGAAGGGCTGGGGGAGGTACTATGTCGTCTCTTCCTTTCTTTTCTTGTTGACTTAACCTGCCTTTaGTTTTATGTCTCTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LREGLGEVLCRLFLSFLVDLTCL*FYVSHH Trigger: GTGATGAGAGACATAAAACAAAAGGCAGGTTAAGTC...AACAAGAAAAGAAAGGAAGAGACGACATAGTACCTCCCCCAGCCCTTCTCGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CAA 90 bp | ATTTTTGAACATTCGAAAATCTTCTGTCCGCCATTTCGTTGGAGAATCTCCCTGCTGATGATCGGTTCTTaGAACTGGCCTTCTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: IFEHSKIFCPPFRWRISLLMIGS*NWPSEI Trigger: GATCTCAGAAGGCCAGTTCAAAGAACCGATCATCAG...CAGGGAGATTCTCCAACGAAATGGCGGACAGAAGATTTTCGAATGTTCAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CAA 90 bp | TCTAACTTATCCCGCTGTTCTTCCTTGAGTGCTCCCTTCTTACTAGGTTCTTCTTTCTCGAAATCCTCCTaGTTTTTAGGTGGTGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNLSRCSSLSAPFLLGSSFSKSS*FLGGGN Trigger: GTTACCACCACCTAAAAACAAGGAGGATTTCGAGAA...AGAAGAACCTAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGGGATAAGTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
||
| CDS-3UTR CAA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACACTGATGATCGGTTCTTaGAACTGGCCTTCTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LLLPADPLDIFLMKFISTLMIGS*NWPSEI Trigger: GATCTCAGAAGGCCAGTTCAAAGAACCGATCATCAG...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGCACTTTGACTATGGCTaGCGACAGAGTCTTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWHFDYG*RQSLLE Trigger: TTCGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTG...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGGTTGGGATAACCACTTaGACTATGGCTTGCGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWVGITT*TMACDR Trigger: TCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAAC...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTCTGATGATCGGTTCTTaGAACTGGCCTTCTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CLSHNILKQNTTTASRSILMIGS*NWPSEI Trigger: GATCTCAGAAGGCCAGTTCAAAGAACCGATCATCAG...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCTCCCGCTGTTCTTCCTaGAGTGCTCCCTTCTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFSRCSS*SAPFLL Trigger: TAGTAAGAAGGGAGCACTCAAGGAAGAACAGCGGGA...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | GTTTGCCTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAGCAGGTCATTACCCGTaGCTTAAAGTTTTCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: VCLFLPQTTAKFLPVYKRAGHYP*LKVFRL Trigger: CAATCTGAAAACTTTAAGCAACGGGTAATGACCTGC...TCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAGGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCGACCTTTTGGCTTTTTaGCTAGCGTCTCTAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVDLLAF*LASLGE Trigger: CTCTCCTAGAGACGCTAGCAAAAAAGCCAAAAGGTC...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACATACTTAGGGTTCGCTTaGCTGTGCTCATTTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLPADPLDIFLMKFISTYLGFA*LCSFFQ Trigger: TTGGAAAAATGAGCACAGCAAAGCGAACCCTAAGTA...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCCACTTTGACTATGGCTaGCGACAGAGTCTTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFHFDYG*RQSLLE Trigger: TTCGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTG...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | CACAATCATGCAATTTCTCAGAACTTACACCACCATCAAGGCAAGTGTATAGGAGAAGCATTGGCAACTTaGGCTGAAGAGTTGTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: HNHAISQNLHHHQGKCIGEALAT*AEELYK Trigger: TTTATACAACTCTTCAGCCAAAGTTGCCAATGCTTC...TCCTATACACTTGCCTTGATGGTGGTGTAAGTTCTGAGAAATTGCATGATTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACATCATCCTTTTCCTTCTaGTCTTTGGATCGAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLPADPLDIFLMKFISTSSFSF*SLDRDS Trigger: GGAATCTCGATCCAAAGACAAGAAGGAAAAGGATGA...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCGACCTTTTGGCTTTTTaGCTAGCGTCTCTAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFDLLAF*LASLGE Trigger: CTCTCCTAGAGACGCTAGCAAAAAAGCCAAAAGGTC...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
||
| CDS GCA 90 bp | ATCTCTTCTGTTCATAAAAGCCACAAAGCCACAGTTTCTTTCTCGTaGTCTTTCTTCATCAGTTCTAGGCCACATAATTTTTACACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISSVHKSHKATVSFS*SFFISSRPHNFYTS Trigger: GCTAGTGTAAAAATTATGTGGCCTAGAACTGATGAAGAAAGAGCACGAGAAAGAAACTGTGGCTTTGTGGCTTTTATGAACAGAAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000191213.7 ENSMUST00000217176.2 |
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| CDS-3UTR CAA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCTACTTAGGGTTCGCTTaGCTGTGCTCATTTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVYLGFA*LCSFFQ Trigger: TTGGAAAAATGAGCACAGCAAAGCGAACCCTAAGTA...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACAGACTTAACCTGCCTTTaGTTTTATGTCTCTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: LLLPADPLDIFLMKFISTDLTCL*FYVSHH Trigger: GTGATGAGAGACATAAAACAAAAGGCAGGTTAAGTC...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGGACTTAACCTGCCTTTaGTTTTATGTCTCTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWDLTCL*FYVSHH Trigger: GTGATGAGAGACATAAAACAAAAGGCAGGTTAAGTC...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | AAATCACACAGTTGTCATCAGTATAGGTTAACTCATTTTGGCAACAGGTTTGTCTTCTCGAAATCCTCCTaGTTTTTAGGTGGTGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: KSHSCHQYRLTHFGNRFVFSKSS*FLGGGN Trigger: GTTACCACCACCTAAAAACAAGGAGGATTTCGAGAA...GACAAACCTGTTGCCAAAATGAGTTAACCTATACTGATGACAACTGTGTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | CTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCATTAGCACAGAAGCATTGGCAACTTaGGCTGAAGAGTTGTATAAA | + |
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Preference number: 5 (lower is better) Translates to: LLLPADPLDIFLMKFISTEALAT*AEELYK Trigger: TTTATACAACTCTTCAGCCAAAGTTGCCAATGCTTC...TGTGCTAATGAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCAGAAGTCGTTACCGCTaGTGCTTCCAATTCAGATTC | + |
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Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFRSRYR*CFQFRF Trigger: GAATCTGAATTGGAAGCACAAGCGGTAACGACTTCT...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCTTTCTAGAAGAGGTCTaGAGAGATTCTGATGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFFLEEV*RDSDEE Trigger: CTCCTCATCAGAATCTCTCAAGACCTCTTCTAGAAA...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | CTATGTCGTCTCTTCCTTTCTTTTCTTGTTGGAGTACATTCATCCTTTTCCTTCCTGAATGCTTTAAGCTaGTTTTCTAGAAGAGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LCRLFLSFLVGVHSSFSFLNALS*FSRRGL Trigger: AAGACCTCTTCTAGAAAACAAGCTTAAAGCATTCAG...GAAGGAAAAGGATGAATGTACTCCAACAAGAAAAGAAAGGAAGAGACGACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCTTCTCGAAATCCTCCTaGTTTTTAGGTGGTGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFFSKSS*FLGGGN Trigger: GTTACCACCACCTAAAAACAAGGAGGATTTCGAGAA...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCGCAGGTCATTACCCGTaGCTTAAAGTTTTCAGATTG | + |
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Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFAGHYP*LKVFRL Trigger: CAATCTGAAAACTTTAAGCAACGGGTAATGACCTGC...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | TCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTGGCTGAATGCTTTAAGCTaGTTTTCTAGAAGAGGATGT | + |
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Preference number: 5 (lower is better) Translates to: SKSQHPKTKYYYCQQIHWLNALS*FSRRGC Trigger: ACATCCTCTTCTAGAAAACAAGCTTAAAGCATTCAG...CCAATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078374.13 |
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| CDS-3UTR CAA 90 bp | CTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAATTCAACTGAATGCTTTAAGCTaGTTTTCTAGAAGAGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LFLPQTTAKFLPVYKRIQLNALS*FSRRGL Trigger: AAGACCTCTTCTAGAAAACAAGCTTAAAGCATTCAG...TTGAATTCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | TGTCTAAGTCACAACATCCTAAAACAAAATACTACTACTGCCAGCAGATCCATTTCTTCCTTTCTTTTCTaGTTGGAGTACATTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: CLSHNILKQNTTTASRSISSFLF*LEYIHP Trigger: AGGATGAATGTACTCCAACAAGAAAAGAAAGGAAGA...AATGGATCTGCTGGCAGTAGTAGTATTTTGTTTTAGGATGTTGTGACTTAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | CTATTTCTTCCCCAGACCACAGCCAAGTTTCTTCCTGTTTATAAAAGAATTCAATCTTCCTTTCTTTTCTaGTTGGAGTACATTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: LFLPQTTAKFLPVYKRIQSSFLF*LEYIHP Trigger: AGGATGAATGTACTCCAACAAGAAAAGAAAGGAAGA...TTGAATTCTTTTATAAACAGGAAGAAACTTGGCTGTGGTCTGGGGAAGAAATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079659.12 |
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| CDS-3UTR CAA 90 bp | AACAAAATACTACTACTGCCAGCAGATCCATTGGACATATTTCTGATGAAATTCCAATATCATTTTTCCTaGGAGTTAATCCTCGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: NKILLLPADPLDIFLMKFQYHFS*ELILAR Trigger: TCTTGCGAGGATTAACTCCAAGGAAAAATGATATTG...GAATTTCATCAGAAATATGTCCAATGGATCTGCTGGCAGTAGTAGTATTTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 |
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| CDS CCA 72 bp | TCTAGGCTGCGCATTAAAAGGCAGTCCGGATGGAGGTaGGGGGAGCGTGTGTTCCATCATAGAAGGCGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SRLRIKRQSGWR*GERVFHHRRRN Trigger: ATTCCGCCTTCTATGATGGAACACACGCTCCCCCCACCTCCATCCGGACTGCCTTTTAATGCGCAGCCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000191213.7 ENSMUST00000217176.2 |
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| CDS CCA 72 bp | GAGCGTGTGTTCCATCATAGAAGGCGGAATGTATATTaGATGTGGAGGAATAGGCACAGCTTTACCCCAACC | + |
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Preference number: 6 (lower is better) Translates to: ERVFHHRRRNVY*MWRNRHSFTPT Trigger: GGTTGGGGTAAAGCTGTGCCTATTCCTCCACATCCAATATACATTCCGCCTTCTATGATGGAACACACGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000191213.7 ENSMUST00000217176.2 |
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| CDS CAA 72 bp | ACTATGGCTTGCGACAGAGTCTTCTCGAAATCCTCCTaGTTTTTAGGTGGTGGTAACATGGGAGCATTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TMACDRVFSKSS*FLGGGNMGALG Trigger: CCCCAATGCTCCCATGTTACCACCACCTAAAAACAAGGAGGATTTCGAGAAGACTCTGTCGCAAGCCATAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000217176.2 |
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| CDS CAA 72 bp | GTATCAGGGCGAGTAAATTCCTTCTCGAAATCCTCCTaGTTTTTAGGTGGTGGTAACATGGGAGCATTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VSGRVNSFSKSS*FLGGGNMGALG Trigger: CCCCAATGCTCCCATGTTACCACCACCTAAAAACAAGGAGGATTTCGAGAAGGAATTTACTCGCCCTGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191213.7 |
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| CDS CAA 90 bp | CGGTGTATCAGGGCGAGTAAATTCCTTTCTGTTGGGATAACCACTTaGACTATGGCTTGCGACAGAGTCTTCTCGAAATCCTCCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RCIRASKFLSVGITT*TMACDRVFSKSSLF Trigger: AAACAAGGAGGATTTCGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAACAGAAAGGAATTTACTCGCCCTGATACACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000217176.2 |
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| CDS GCA 72 bp | CAGAGTCTGACTGAGGAGGCTCAAACCGACTTAACCTaGCTTTTGTTTTATGTCTCTCATCACGTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QSLTEEAQTDLT*LLFYVSHHVLP Trigger: AGGAAGAACGTGATGAGAGACATAAAACAAAAGGCAGGTTAAGTCGGTTTGAGCCTCCTCAGTCAGACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000191213.7 ENSMUST00000217176.2 |
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| CDS TCA 72 bp | ATAATCATCAAGAACACCAGACGATCTATTTCTTCTTaGAGGCACATCCATAGAACGTCGCTGACCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: IIIKNTRRSISS*RHIHRTSLTIR Trigger: TCTGATGGTCAGCGACGTTCTATGGATGTGCCTTCAAGAAGAAATAGATCGTCTGGTGTTCTTGATGATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000191213.7 |
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| CDS TCA 72 bp | TGCATAATCATCAAGAACAGACGATCTATTTCTTCTTaGAGGCACATCCATAGAACGTCGCTGACCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: CIIIKNRRSISS*RHIHRTSLTIR Trigger: TCTGATGGTCAGCGACGTTCTATGGATGTGCCTTCAAGAAGAAATAGATCGTCTGTTCTTGATGATTATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217176.2 |
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| CDS GCA 72 bp | TTCCTTTCTGTTGGGATAACCACTTTGACTATGGCTTaGGACAGAGTCTTCTCGAAATCCTCCTTGTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: FLSVGITTLTMA*DRVFSKSSLFL Trigger: TAAAAACAAGGAGGATTTCGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAACAGAAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000217176.2 |
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| CDS CAA 72 bp | ATTCCTTTCTGTTGGGATAACCACTTTGACTATGGCTaGCGACAGAGTCTTCTCGAAATCCTCCTTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: IPFCWDNHFDYG*RQSLLEILLVF Trigger: AAAAACAAGGAGGATTTCGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAACAGAAAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000217176.2 |
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| CDS CAA 90 bp | CATCAGAGTCTGACTGAGGAGGCTCAAACCGACTTAACCTGCCTTTaGTTTTATGTCTCTCATCACGTTCTTCCTGAATTTGTTTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: HQSLTEEAQTDLTCL*FYVSHHVLPEFVLV Trigger: AACTAAAACAAATTCAGGAAGAACGTGATGAGAGACATAAAACAAAAGGCAGGTTAAGTCGGTTTGAGCCTCCTCAGTCAGACTCTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000191213.7 ENSMUST00000217176.2 |
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| CDS CCA 72 bp | GTTGATTTCTCTGTTCATAATCATAGCTTCAAACATTaGCCCTTCACGTACAACAAATTCTATCATTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: VDFSVHNHSFKH*PFTYNKFYHSV Trigger: CACCGAATGATAGAATTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATGATTATGAACAGAGAAATCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078374.13 ENSMUST00000079659.12 ENSMUST00000217176.2 |
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