Pregenerated sensors for U2AF1L4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078765Ensembl transcript IDs: ENSMUST00000043273.16, ENSMUST00000163276.8, ENSMUST00000163464.8, ENSMUST00000163482.8, ENSMUST00000163654.8, ENSMUST00000163848.8, ENSMUST00000164365.8, ENSMUST00000165722.2, ENSMUST00000166257.8, ENSMUST00000166510.8, ENSMUST00000166960.8, ENSMUST00000167202.8, ENSMUST00000167361.8, ENSMUST00000167501.8, ENSMUST00000168229.8, ENSMUST00000168333.8, ENSMUST00000168555.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCGGTGGTCTGGGGAACGACGTCGGTTCCTTTCTCGGGGACGGTaGCCTGTGTGGGACCTTGGAGGTGACCTATGCCTGGGTCCTCGC | + |
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Preference number: 1 (lower is better) Translates to: CRWSGERRRFLSRGR*PVWDLGGDLCLGPR Trigger: GCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAGACCACCGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168333.8 |
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| 3UTR GCA 90 bp | CTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAACTGAGGGGAAAGTGGGTGACCATG | + |
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Preference number: 1 (lower is better) Translates to: LPVEPAVIEFRYSPL*ILLPPELRGKWVTM Trigger: CATGGTCACCCACTTTCCCCTCAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168555.8 |
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| 3UTR GCA 90 bp | CTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAACTTAACGTAGACATTGCCCACGAG | + |
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Preference number: 1 (lower is better) Translates to: LPVEPAVIEFRYSPL*ILLPPELNVDIAHE Trigger: CTCGTGGGCAATGTCTACGTTAAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165722.2 ENSMUST00000167501.8 ENSMUST00000168229.8 |
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| 3UTR CCA 90 bp | GGGATGCTGGGACTGGAGAGTGAAGGGCACTTTGAAAAGGGACGCTaGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCG | + |
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Preference number: 1 (lower is better) Translates to: GMLGLESEGHFEKGR*TGTSMPLGGEQGHP Trigger: CGGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAAGTGCCCTTCACTCTCCAGTCCCAGCATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR TCA 90 bp | TCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGTaGCTTATCGATAGTCCTCAGGTTGGGAGGTTTCAGTGGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SVPFSGTVTCVGPWR*LIDSPQVGRFQWWP Trigger: TGGCCACCACTGAAACCTCCCAACCTGAGGACTATCGATAAGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163276.8 |
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| 3UTR TCA 90 bp | GGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATaGAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: GGTGGGGSCVEQIIL*SSEAWGCWDWRVKG Trigger: GCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR GCA 90 bp | CTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAACTCAAAGAAGTTATCATAGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: LPVEPAVIEFRYSPL*ILLPPELKEVIIVF Trigger: GAACACTATGATAACTTCTTTGAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164365.8 |
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| 3UTR CCA 90 bp | TGTGAATACCTCCTGCAGAAGATGGGGAGAAGCTCAGCTAAGGTCTaGCACACAGGAAACCCAGTTACCCTGGCAACCCTCACCTCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: CEYLLQKMGRSSAKV*HTGNPVTLATLTSK Trigger: CTTTGAGGTGAGGGTTGCCAGGGTAACTGGGTTTCCTGTGTGCCAGACCTTAGCTGAGCTTCTCCCCATCTTCTGCAGGAGGTATTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163848.8 ENSMUST00000168555.8 |
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| 3UTR TCA 90 bp | ACCATGGGCTGTGGAATTCAAGATCTTCAGGGGACTAGTCAGCTCTaGGGCTGGACTCAACTTATCGATAGTCCTCAGGTTGGGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: TMGCGIQDLQGTSQL*GWTQLIDSPQVGRF Trigger: AAACCTCCCAACCTGAGGACTATCGATAAGTTGAGTCCAGCCTCAGAGCTGACTAGTCCCCTGAAGATCTTGAATTCCACAGCCCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168555.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGACGGTGACCTGTGTGGGACCTTGGAGGTGACCTATGCCTGGGTCCTCGCCTCGGCATGCACAGCCTaGCCGTTGAACCAGCGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GDGDLCGTLEVTYAWVLASACTA*PLNQRL Trigger: TAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGA...GGCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168333.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGACGGTGACCTGTGTGGGACCTTGGAGGTGACCTATGCCTGGGTCCTCGCCAGAAGCCACCTCGGGTaGATTCCCCCATCTCATACT | + |
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Preference number: 2 (lower is better) Translates to: GDGDLCGTLEVTYAWVLARSHLG*IPPSHT Trigger: AGTATGAGATGGGGGAATGCACCCGAGGTGGCTTCT...GGCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168333.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR TCA 90 bp | TGCACAGCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: CTACPLNQRLLSSATARSAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...AGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164365.8 ENSMUST00000167501.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGCCCGCTCTGCATCCTCCTCCCGCCGGAACTTAACGTAGACATTGCCCACGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: YSPLCILLPPELNVDIAHAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...GTGGGCAATGTCTACGTTAAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167501.8 |
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| 3UTR-3UTR TCA 90 bp | GACGTCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGTGACCTCTCCTGCAGTTCTGTaGATACCTCCTGCAGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DVGSFLGDGDLCGTLEVTSPAVL*IPPAED Trigger: ATCTTCTGCAGGAGGTATTCACAGAACTGCAGGAGA...GGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168555.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAACGACGTCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GNDVGSFLGDGDLCGTLELGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...CTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163276.8 ENSMUST00000164365.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACGACGTCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GTTSVPFSGTVTCVGPWRLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...CCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163276.8 ENSMUST00000164365.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTAAGGTCTGGCACACAGGAAACCCAGTTACCCTGGCAACCCTCACCTCAGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SAKVWHTGNPVTLATLTSAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...TGAGGTGAGGGTTGCCAGGGTAACTGGGTTTCCTGTGTGCCAGACCTTAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163848.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCTGGCACACAGGAAACCCAGTTACCCTGGCAACCCTCACCTCAAAGAAGTGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: RSGTQETQLPWQPSPQRSAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...ACTTCTTTGAGGTGAGGGTTGCCAGGGTAACTGGGTTTCCTGTGTGCCAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163848.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGCATGCACAGCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCGATTCCGGTACAAGTTaGGCAGGACTATGGTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SACTACPLNQRLLSSATADSGTS*AGLWSE Trigger: TTCAGACCATAGTCCTGCTCAACTTGTACCGGAATC...GGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168229.8 |
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| 3UTR-3UTR CCA 90 bp | TCGGCATGCACAGCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SACTACPLNQRLLSSATALGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...GGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCGGCATGCACAGCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: QLGMHSLPVEPAVIEFRYLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...GTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTGAAGCCTGGGGATGCTaGGACTGGAGAGTGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: EEGQEEEVPVSNRLYYEAEAWGC*DWRVKG Trigger: GCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTC...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGTGGGGATGCTGGGACTaGAGAGTGAAGGGCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPWGCWD*RVKGTL Trigger: CAAAGTGCCCTTCACTCTCCAGTCCCAGCATCCCCA...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGGAAGCCTGGGGATGCTaGGACTGGAGAGTGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLEAWGC*DWRVKG Trigger: GCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTC...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACTTTGAAAAGGGACGCTaGACAGGAACATCTATGCCC | + |
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Preference number: 2 (lower is better) Translates to: YIMKLRSLGMLGLESEGHFEKGR*TGTSMP Trigger: GGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTTGGGGATGCTGGGACTaGAGAGTGAAGGGCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: EEGQEEEVPVSNRLYYEAWGCWD*RVKGTL Trigger: CAAAGTGCCCTTCACTCTCCAGTCCCAGCATCCCCA...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGGGCTGTGGAATTCAAGATCTTCAGGGGACTAGTCAGCTCTGAGGCTGGATTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: PWAVEFKIFRGLVSSEAGLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...TCCAGCCTCAGAGCTGACTAGTCCCCTGAAGATCTTGAATTCCACAGCCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168555.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGTTTGAAAAGGGACGCTaGACAGGAACATCTATGCCC | + |
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Preference number: 2 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPFEKGR*TGTSMP Trigger: GGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTTTTGAAAAGGGACGCTaGACAGGAACATCTATGCCC | + |
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Preference number: 2 (lower is better) Translates to: EEGQEEEVPVSNRLYYEAFEKGR*TGTSMP Trigger: GGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CAA 90 bp | CCGCTACAGCCCGCTCTGCATCCTCCTCCCGCCGGAACTGAGGGGAAAGTGGGTTCGATAGTCCTCAGGTaGGGAGGTTTCAGTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: PLQPALHPPPAGTEGKVGSIVLR*GGFSGG Trigger: GCCACCACTGAAACCTCCCAACCTGAGGACTATCGA...ACCCACTTTCCCCTCAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168555.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGACGGTGACCTGTGTGGGACCTTGGAGGTGACCTATGCCTGGGTCCTCGCCTGCACAGCCTGCCCGTaGAACCAGCGGTTATTGAGT | + |
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Preference number: 3 (lower is better) Translates to: GDGDLCGTLEVTYAWVLACTACP*NQRLLS Trigger: ACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA...GGCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168333.8 ENSMUST00000168555.8 |
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| 3UTR TCA 72 bp | TCTGGGGAACGACGTCGGTTCCTTTCTCGGGGACGGTaGCCTGTGTGGGACCTTGGAGGTGACCTATGCCTG | + |
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Preference number: 3 (lower is better) Translates to: SGERRRFLSRGR*PVWDLGGDLCL Trigger: CAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168333.8 ENSMUST00000168555.8 |
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| 3UTR GCA 72 bp | GAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAACTGAGGGGAAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: EPAVIEFRYSPL*ILLPPELRGKW Trigger: CCACTTTCCCCTCAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168555.8 |
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| 3UTR-3UTR CAA 90 bp | GGAACGACGTCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGCGTAGGTGCATAAAGTaGCAGAAGCCACCTCGGGTG | + |
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Preference number: 3 (lower is better) Translates to: GTTSVPFSGTVTCVGPWRRRCIK*QKPPRV Trigger: CACCCGAGGTGGCTTCTGCAACTTTATGCACCTACG...CCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168333.8 ENSMUST00000168555.8 |
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| 3UTR TCA 72 bp | TCTGGGGAACGACGTCGGTTCCTTTCTCGGGGACGGTaGCCTGTGTGGGACCTTGGAGGTGACTTATCGATA | + |
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Preference number: 3 (lower is better) Translates to: SGERRRFLSRGR*PVWDLGGDLSI Trigger: TATCGATAAGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163276.8 |
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| 3UTR CCA 72 bp | CTCCTGCAGAAGATGGGGAGAAGCTCAGCTAAGGTCTaGCACACAGGAAACCCAGTTACCCTGGCAACCCTC | + |
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Preference number: 3 (lower is better) Translates to: LLQKMGRSSAKV*HTGNPVTLATL Trigger: GAGGGTTGCCAGGGTAACTGGGTTTCCTGTGTGCCAGACCTTAGCTGAGCTTCTCCCCATCTTCTGCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163848.8 ENSMUST00000168555.8 |
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| 3UTR TCA 72 bp | TTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGTaGCTTATCGATAGTCCTCAGGTTGGGAGGTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: FSGTVTCVGPWR*LIDSPQVGRFQ Trigger: CTGAAACCTCCCAACCTGAGGACTATCGATAAGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163276.8 |
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| 3UTR GCA 72 bp | GAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAACTTAACGTAGACATT | + |
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Preference number: 3 (lower is better) Translates to: EPAVIEFRYSPL*ILLPPELNVDI Trigger: AATGTCTACGTTAAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165722.2 ENSMUST00000167501.8 ENSMUST00000168229.8 |
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| 3UTR GCA 72 bp | GAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAACTCAAAGAAGTTATC | + |
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Preference number: 3 (lower is better) Translates to: EPAVIEFRYSPL*ILLPPELKEVI Trigger: GATAACTTCTTTGAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164365.8 |
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| 3UTR CCA 72 bp | GGACTGGAGAGTGAAGGGCACTTTGAAAAGGGACGCTaGACAGGAACATCTATGCCCTTGGGTGGAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GLESEGHFEKGR*TGTSMPLGGEQ Trigger: TTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAAGTGCCCTTCACTCTCCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTGGAACATCTATGCCCTaGGGTGGAGAGCAAGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: EEGQEEEVPVSNRLYYEAGTSMP*GGEQGH Trigger: GTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCC...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043273.16 ENSMUST00000163482.8 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| 3UTR CCA 72 bp | TTCTCCTGCAGTTCTGTGAATACCTCCTGCAGAAGATaGGGAGAAGCTCAGCTAAGGTCTGGCACACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FSCSSVNTSCRR*GEAQLRSGTQE Trigger: TTCCTGTGTGCCAGACCTTAGCTGAGCTTCTCCCCATCTTCTGCAGGAGGTATTCACAGAACTGCAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163848.8 ENSMUST00000168555.8 |
||
| 3UTR TCA 72 bp | TGTGGAATTCAAGATCTTCAGGGGACTAGTCAGCTCTaGGGCTGGACTCAACTTATCGATAGTCCTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CGIQDLQGTSQL*GWTQLIDSPQV Trigger: AACCTGAGGACTATCGATAAGTTGAGTCCAGCCTCAGAGCTGACTAGTCCCCTGAAGATCTTGAATTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168555.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGGACCTTGGAGGTGACCTATGCCTGGGTCCTCGCCCATAGAGCTGCCGGCGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGTLEVTYAWVLAHRAAGEHRSP*RQAPIC Trigger: ACAAATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...GCCGGCAGCTCTATGGGCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164365.8 ENSMUST00000168555.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACGACGTCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GNDVGSFLGDGDLCGTLEEHRSP*RQAPIL Trigger: TAAGATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...CTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165722.2 ENSMUST00000168333.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGTCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDAGQEHLCPWVESKGTRRYSPL*ILLPPE Trigger: TTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCG...ACGGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGTGTGGGACCTTGGAGGTaGCCTATGCCTGGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RDAGQEHLCPWVESKGTRVGPWR*PMPGSS Trigger: CGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCAC...ACGGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGTGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RDAGQEHLCPWVESKGTREHRSP*RQAPIL Trigger: TAAGATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...ACGGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTGCATCCGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACPLNQRLLSSATARSASEHRSP*RQAPIC Trigger: ACAAATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...GGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGTGGGACCTTGGAGGTaGCCTATGCCTGGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGTLDRNIYALGWRARAPVGPWR*PMPGSS Trigger: CGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCAC...GGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CTACPLNQRLLSSATARSEHRSP*RQAPIL Trigger: TAAGATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...AGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165722.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCGGCATGCACAGCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGMHSLPVEPAVIEFRYEHRSP*RQAPIC Trigger: ACAAATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...GTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| 3UTR CAA 72 bp | TCGGCATGCACAGCCTGCCCGTTGAACCAGCGGTTATaGAGTTCCGCTACAGCCCGCTCTGCATCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SACTACPLNQRL*SSATARSASSS Trigger: GGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| 3UTR CAA 72 bp | GGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTaGGAGGTGACCTATGCCTGGGTCCTCGCCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSFLGDGDLCGT*EVTYAWVLAHR Trigger: TCTATGGGCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168333.8 ENSMUST00000168555.8 |
||
| CDS-3UTR TCA 90 bp | GACGTCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGTGACCGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DVGSFLGDGDLCGTLEVTAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...GGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168333.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGGAGACAGCTCGGCATaGACAGCCTGCCCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGTLDRNIYALGWRARAPGDSSA*TACPLN Trigger: GTTCAACGGGCAGGCTGTGCATGCCGAGCTGTCTCC...GGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGTGAGGTGACCTATGCCTaGGTCCTCGCCCATAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDAGQEHLCPWVESKGTREVTYA*VLAHRA Trigger: AGCTCTATGGGCGAGGACCCAGGCATAGGTCACCTC...ACGGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKRDAGQEHLCPWVESKGEHRSP*RQAPIL Trigger: TAAGATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...GCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCTCGGCATGCACAGCCTaGCCGTTGAACCAGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGTLDRNIYALGWRARAPSACTA*PLNQRL Trigger: TAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGA...GGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTAAGGTCTGGCACACAGGAAACCCAGTTACCCTGGCAACCCTCACCTCAGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAKVWHTGNPVTLATLTSEHRSP*RQAPIC Trigger: ACAAATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...TGAGGTGAGGGTTGCCAGGGTAACTGGGTTTCCTGTGTGCCAGACCTTAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163848.8 ENSMUST00000168555.8 |
||
| CDS-3UTR GCA 90 bp | CGGCGCAAGTTCCGAGATATGGGCCGTAGGTGCATAAAGTTGCAGAAGCCACCTGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRKFRDMGRRCIKLQKPPEHRSP*RQAPIC Trigger: ACAAATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...AGGTGGCTTCTGCAACTTTATGCACCTACGGCCCATATCTCGGAACTTGCGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164365.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGTLDRNIYALGWRARAPKVGLL*SREHRS Trigger: GGACCGGTGCTCCCGACTTCACAACAAACCGACTTT...GGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTGCATCCTCCAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPLNQRLLSSATARSASSKVGLL*SREHRS Trigger: GGACCGGTGCTCCCGACTTCACAACAAACCGACTTT...GGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGTCCTCGCCCATAGAGCTGCCGGCGCAAGTTCCGAGATATGGGCCGTAGGACTATGGTCTGGCTaGAAGTCGGTTTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AWVLAHRAAGASSEIWAVGLWSG*KSVCCE Trigger: TTCACAACAAACCGACTTTCAGCCAGACCATAGTCC...TACGGCCCATATCTCGGAACTTGCGCCGGCAGCTCTATGGGCGAGGACCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165722.2 ENSMUST00000168333.8 |
||
| CDS-3UTR TCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACGTGGGACCTTGGAGGTaGCCTATGCCTGGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YIMKLRSLGMLGLESEGHVGPWR*PMPGSS Trigger: CGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCAC...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCGGAGACAGCTCGGCATaGACAGCCTGCCCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKRDAGQEHLCPWVESKGGDSSA*TACPLN Trigger: GTTCAACGGGCAGGCTGTGCATGCCGAGCTGTCTCC...GCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGTGACCTATGCCCCGCCGGAATTCTCCTaGAGTTCTGTGAATACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSFLGDGDLCGTLEVTYAPPEFS*SSVNTS Trigger: GGAGGTATTCACAGAACTGCAGGAGAATTCCGGCGG...GGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168333.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGGTGGGACCTTGGAGGTaGCCTATGCCCGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FEKGRWTGTSMPLGGEQGVGPWR*PMPALH Trigger: ATGCAGAGCGGGCATAGGTCACCTCCAAGGTCCCAC...CCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163482.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPRYSPL*ILLPPE Trigger: TTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCG...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGGGAGACAGCTCGGCATaGACAGCCTGCCCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FEKGRWTGTSMPLGGEQGGDSSA*TACPLN Trigger: GTTCAACGGGCAGGCTGTGCATGCCGAGCTGTCTCC...CCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTCGCCCATAGAGCTGCCGGCGCAAGTTCCGAGATATGGGCCGTAGGTTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVLAHRAAGASSEIWAVGLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...ACCTACGGCCCATATCTCGGAACTTGCGCCGGCAGCTCTATGGGCGAGGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165722.2 ENSMUST00000168333.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTAAGGTCTGGCACACAGGAAACCCAGTTACCCTGGCAACCCTCACCTCAAAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLRSGTQETQLPWQPSPQKVGLL*SREHRS Trigger: GGACCGGTGCTCCCGACTTCACAACAAACCGACTTT...TTGAGGTGAGGGTTGCCAGGGTAACTGGGTTTCCTGTGTGCCAGACCTTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163848.8 ENSMUST00000168555.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGGTGACCTATGCCGGACTATGGTCTGGCTaGAAGTCGGTTTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSFLGDGDLCGTLEVTYAGLWSG*KSVCCE Trigger: TTCACAACAAACCGACTTTCAGCCAGACCATAGTCC...GGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165722.2 ENSMUST00000168333.8 |
||
| CDS-3UTR TCA 90 bp | GACGGTGACCTGTGTGGGACCTTGGAGGTGACCTATGCCTGGGTCCTCGCCCATTCTCCTGCAGTTCTGTaGATACCTCCTCAAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DGDLCGTLEVTYAWVLAHSPAVL*IPPQRS Trigger: ACTTCTTTGAGGAGGTATTCACAGAACTGCAGGAGA...ATGGGCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168333.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCGCTACAGCCCGCTCTaGATCCTCCTCCCGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEGQEEEVPVSNRLYYEARYSPL*ILLPPE Trigger: TTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCG...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGTCGGCATGCACAGCCTaGCCGTTGAACCAGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FEKGRWTGTSMPLGGEQGSACTA*PLNQRL Trigger: TAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGA...CCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TGTGATCCATCTGCAGTTTGGGCTGTGTTCTGTGGATTCCGGTACAAGTTGAGCGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDPSAVWAVFCGFRYKLSEHRSP*RQAPIC Trigger: ACAAATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...GCTCAACTTGTACCGGAATCCACAGAACACAGCCCAAACTGCAGATGGATCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000163276.8 ENSMUST00000163848.8 ENSMUST00000164365.8 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGTTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDAGQEHLCPWVESKGTRLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...ACGGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR CCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACGAGGTGACCTATGCCTaGGTCCTCGCCCATAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YIMKLRSLGMLGLESEGHEVTYA*VLAHRA Trigger: AGCTCTATGGGCGAGGACCCAGGCATAGGTCACCTC...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CCA 90 bp | TACAGCCCGCTCTGCATCCTCCTCCCGCCGGAACTTAACGTAGACATTGCCCACGACAGAAAGCAGGGCTaGCTGAAAGTCGGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSPLCILLPPELNVDIAHDRKQG*LKVGLL Trigger: CAACAAACCGACTTTCAGCCAGCCCTGCTTTCTGTC...GTGGGCAATGTCTACGTTAAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168229.8 |
||
| 3UTR CAA 72 bp | CGCAAGTTCCGAGATATGGGCCGTAGGTGCATAAAGTaGCAGAAGCCACCTCGGGTGCATTCCCCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKFRDMGRRCIK*QKPPRVHSPIS Trigger: TGAGATGGGGGAATGCACCCGAGGTGGCTTCTGCAACTTTATGCACCTACGGCCCATATCTCGGAACTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000164365.8 ENSMUST00000165722.2 ENSMUST00000168229.8 ENSMUST00000168333.8 ENSMUST00000168555.8 |
||
| CDS-3UTR TCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YIMKLRSLGMLGLESEGHKVGLL*SREHRS Trigger: GGACCGGTGCTCCCGACTTCACAACAAACCGACTTT...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR TCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YIMKLRSLGMLGLESEGHAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FEKGRWTGTSMPLGGEQGAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...CCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGGGAGACAGCTCGGCATaGACAGCCTGCCCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPGDSSA*TACPLN Trigger: GTTCAACGGGCAGGCTGTGCATGCCGAGCTGTCTCC...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGCCTGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTACPLNQRLLSSATARSLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...AGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165722.2 |
||
| CDS-3UTR GCA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGGAGCACCGGTCCCCGTaGCGGCAGGCTCCAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLEHRSP*RQAPIL Trigger: TAAGATTGGAGCCTGCCGGCACGGGGACCGGTGCTC...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTGGAGACAGCTCGGCATaGACAGCCTGCCCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EEGQEEEVPVSNRLYYEAGDSSA*TACPLN Trigger: GTTCAACGGGCAGGCTGTGCATGCCGAGCTGTCTCC...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACAGAAGCCACCTCGGGTaGATTCCCCCATCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: YIMKLRSLGMLGLESEGHRSHLG*IPPSHT Trigger: AGTATGAGATGGGGGAATGCACCCGAGGTGGCTTCT...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGGACCTATGCCCGCTCTaGATCCTCCTCCCGCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLDLCPL*ILLPPE Trigger: TTCCGGCGGGAGGAGGATGCAGAGCGGGCATAGGTC...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163482.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGGAGGTGACCTATGCCTaGGTCCTCGCCCATAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPEVTYA*VLAHRA Trigger: AGCTCTATGGGCGAGGACCCAGGCATAGGTCACCTC...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR TCA 90 bp | TGTGATCCATCTGCAGTTTGGGCTGTGTTCTGTGGATTCCGGTACAAGTTGAGCAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CDPSAVWAVFCGFRYKLSKVGLL*SREHRS Trigger: GGACCGGTGCTCCCGACTTCACAACAAACCGACTTT...GCTCAACTTGTACCGGAATCCACAGAACACAGCCCAAACTGCAGATGGATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000163276.8 ENSMUST00000163848.8 ENSMUST00000164365.8 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCGGACTATGGTCTGGCTaGAAGTCGGTTTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKRDAGQEHLCPWVESKGGLWSG*KSVCCE Trigger: TTCACAACAAACCGACTTTCAGCCAGACCATAGTCC...GCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGTCTCCTGCAGTTCTGTaGATACCTCCTCCACGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPSPAVL*IPPPRR Trigger: GCGACGTGGAGGAGGTATTCACAGAACTGCAGGAGA...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166510.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCGATATGGGCCGTAGGTaGATAAAGTTGCAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRDAGQEHLCPWVESKGDMGRR*IKLQKP Trigger: TGGCTTCTGCAACTTTATGCACCTACGGCCCATATC...GCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGTCGGCATGCACAGCCTaGCCGTTGAACCAGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLSACTA*PLNQRL Trigger: TAACCGCTGGTTCAACGGGCAGGCTGTGCATGCCGA...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000167361.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGAGAAGCCACCTCGGGTaGATTCCCCCATCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPRSHLG*IPPSHT Trigger: AGTATGAGATGGGGGAATGCACCCGAGGTGGCTTCT...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YIMKLRSLGMLGLESEGHLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR TCA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLAHVTV*SICSLG Trigger: GCCCAAACTGCAGATGGATCACACTGTCACGTGAGC...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 |
||
| CDS-3UTR TCA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACTCTCCTGCAGTTCTGTaGATACCTCCTCAAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIMKLRSLGMLGLESEGHSPAVL*IPPQRS Trigger: ACTTCTTTGAGGAGGTATTCACAGAACTGCAGGAGA...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 |
||
| CDS-3UTR TCA 90 bp | TGTGATCCATCTGCAGTTTGGGCTGTGTTCTGTGGATTCCGGTACAAGTTGAGCGAAAGCAGGGCTGGCTaGAAGTCGGTTTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CDPSAVWAVFCGFRYKLSESRAG*KSVCCE Trigger: TTCACAACAAACCGACTTTCAGCCAGCCCTGCTTTC...GCTCAACTTGTACCGGAATCCACAGAACACAGCCCAAACTGCAGATGGATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168229.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTAGAAGCCACCTCGGGTaGATTCCCCCATCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: EEGQEEEVPVSNRLYYEARSHLG*IPPSHT Trigger: AGTATGAGATGGGGGAATGCACCCGAGGTGGCTTCT...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGTTGGGCTGTGTTCTGTaGATTCCGGTACAAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPLGCVL*IPVQVE Trigger: CTCAACTTGTACCGGAATCCACAGAACACAGCCCAA...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
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| CDS-3UTR TCA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTGGACTATGGTCTGGCTaGAAGTCGGTTTGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEGQEEEVPVSNRLYYEAGLWSG*KSVCCE Trigger: TTCACAACAAACCGACTTTCAGCCAGACCATAGTCC...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
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| CDS-3UTR TCA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGTCTCCTGCAGTTCTGTaGATACCTCCTCAAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPSPAVL*IPPQRS Trigger: ACTTCTTTGAGGAGGTATTCACAGAACTGCAGGAGA...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 |
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| CDS-3UTR GCA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGGATATGGGCCGTAGGTaGATAAAGTTGCAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLDMGRR*IKLQKP Trigger: TGGCTTCTGCAACTTTATGCACCTACGGCCCATATC...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043273.16 ENSMUST00000167361.8 |
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| CDS TCA 90 bp | TGCCGGTGGTCTGGGGAACGACGTCGGTTCCTTTCTCGGGGACGGTaGCCTGTGTGGGACCTTGGAGGTGACCTATGCCCGCTCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: CRWSGERRRFLSRGR*PVWDLGGDLCPLCI Trigger: GATGCAGAGCGGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAGACCACCGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163482.8 |
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| CDS TCA 90 bp | TGCCGGTGGTCTGGGGAACGACGTCGGTTCCTTTCTCGGGGACGGTaGCCTGTGTGGGACCTTGGAGGTGACCTTAACGTAGACATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRWSGERRRFLSRGR*PVWDLGGDLNVDIA Trigger: GGCAATGTCTACGTTAAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAGACCACCGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167202.8 |
||
| CDS-3UTR CAA 90 bp | GGGAACGACGTCGGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTTGGAGCCGGCAGGCTCCAATTaGTCCTTCTCAGTCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GNDVGSFLGDGDLCGTLEPAGSN*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAATTGGAGCCTGCCGG...CTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163276.8 ENSMUST00000168555.8 |
||
| CDS TCA 90 bp | CTGAGCTCAGACAGAAAGCAGGGCTGGCTGAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCCCCGTGCCGGCAGGCTCCAATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSDRKQGWLKVGLL*SREHRSPCRQAPIC Trigger: ACAAATTGGAGCCTGCCGGCACGGGGACCGGTGCTCCCGACTTCACAACAAACCGACTTTCAGCCAGCCCTGCTTTCTGTCTGAGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168229.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGTTGCACAGCCTGCCCGTaGAACCAGCGGTTATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RDAGQEHLCPWVESKGTRCTACP*NQRLLS Trigger: ACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA...ACGGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCCGTAGGTGCATAAAGTaGCAGAAGCCACCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KGTLDRNIYALGWRARAPRRCIK*QKPPRV Trigger: CACCCGAGGTGGCTTCTGCAACTTTATGCACCTACG...GGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCCCGCTCTGCATCCTCCTCCCGCCGGAACTTAACGTAGACATTGCCCACCCGGCAGGCTCCAATTaGTCCTTCTCAGTCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSPLCILLPPELNVDIAHPAGSN*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAATTGGAGCCTGCCGG...GTGGGCAATGTCTACGTTAAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167501.8 ENSMUST00000168229.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCGTTGAACCAGCGGTTATTGAGTTCCGCTACAGCCCGCTCTGCATCCTCCCCGGCAGGCTCCAATTaGTCCTTCTCAGTCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CPLNQRLLSSATARSASSPAGSN*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAATTGGAGCCTGCCGG...GGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAACGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGTCCTCGCCCATAGAGCTGCCGGCGCAAGTTCCGAGATATGGGCCGTAAAAGAGCAGTTAACCTaGTCCTTCTCAGTCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AWVLAHRAAGASSEIWAVKEQLT*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAGGTTAACTGCTCTTT...TACGGCCCATATCTCGGAACTTGCGCCGGCAGCTCTATGGGCGAGGACCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168333.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCACCCGGATTCCGGTACAAGTaGAGCAGGACTATGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGTLDRNIYALGWRARAPGFRYK*SRTMVW Trigger: CCAGACCATAGTCCTGCTCAACTTGTACCGGAATCC...GGGTGCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCTTGAACCAGCGGTTATaGAGTTCCGCTACAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKRDAGQEHLCPWVESKGLNQRL*SSATAR Trigger: GCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAA...GCCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGTGCACAGCCTGCCCGTaGAACCAGCGGTTATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FEKGRWTGTSMPLGGEQGCTACP*NQRLLS Trigger: ACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA...CCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGCGTAGGTGCATAAAGTaGCAGAAGCCACCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FEKGRWTGTSMPLGGEQGRRCIK*QKPPRV Trigger: CACCCGAGGTGGCTTCTGCAACTTTATGCACCTACG...CCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CAA 90 bp | TATATTATGAAGCTCCGAAGCCTGGGGATGCTGGGACTGGAGAGTGAAGGGCACCGTAGGTGCATAAAGTaGCAGAAGCCACCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YIMKLRSLGMLGLESEGHRRCIK*QKPPRV Trigger: CACCCGAGGTGGCTTCTGCAACTTTATGCACCTACG...GTGCCCTTCACTCTCCAGTCCCAGCATCCCCAGGCTTCGGAGCTTCATAATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000166510.8 ENSMUST00000167361.8 |
||
| CDS-3UTR CAA 90 bp | CGTCGCTCACGTGACAGTGTGATCCATCTGCAGTTTGGGCTGTGTTCTGTGGATCCGGCAGGCTCCAATTaGTCCTTCTCAGTCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RRSRDSVIHLQFGLCSVDPAGSN*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAATTGGAGCCTGCCGG...ATCCACAGAACACAGCCCAAACTGCAGATGGATCACACTGTCACGTGAGCGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163276.8 ENSMUST00000163848.8 ENSMUST00000167501.8 ENSMUST00000168555.8 |
||
| CDS TCA 90 bp | CTGCAGTTCTGTGAATACCTCCTCCACGTCGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGCTGTGTTCTGTGGATTCCGGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: LQFCEYLLHVAHVTV*SICSLGCVLWIPVQ Trigger: TTGTACCGGAATCCACAGAACACAGCCCAAACTGCAGATGGATCACACTGTCACGTGAGCGACGTGGAGGAGGTATTCACAGAACTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166510.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGTTGAACCAGCGGTTATaGAGTTCCGCTACAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPLNQRL*SSATAR Trigger: GCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAA...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| CDS-3UTR CAA 90 bp | GAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTCCGTGCACAGCCTGCCCGTaGAACCAGCGGTTATTGAGT | + |
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Preference number: 5 (lower is better) Translates to: EGQEEEVPVSNRLYYEAPCTACP*NQRLLS Trigger: ACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA...CGGAGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| CDS-3UTR CAA 90 bp | TGTGATCCATCTGCAGTTTGGGCTGTGTTCTGTGGATTCCGGTACAAGTTGAGCCCGGCAGGCTCCAATTaGTCCTTCTCAGTCCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: CDPSAVWAVFCGFRYKLSPAGSN*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAATTGGAGCCTGCCGG...GCTCAACTTGTACCGGAATCCACAGAACACAGCCCAAACTGCAGATGGATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000163276.8 ENSMUST00000163848.8 ENSMUST00000167501.8 ENSMUST00000168229.8 ENSMUST00000168555.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTTTGAACCAGCGGTTATaGAGTTCCGCTACAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: EEGQEEEVPVSNRLYYEALNQRL*SSATAR Trigger: GCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAA...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 ENSMUST00000166960.8 ENSMUST00000167361.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAAAGGGACGCTGGACAGGAACATCTATGCCCTTGGGTGGAGAGCAAGGGAAAGAGCAGTTAACCTaGTCCTTCTCAGTCCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: FEKGRWTGTSMPLGGEQGKEQLT*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAGGTTAACTGCTCTTT...CCCTTGCTCTCCACCCAAGGGCATAGATGTTCCTGTCCAGCGTCCCTTTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
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| CDS-3UTR CAA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGTTGAACCAGCGGTTATaGAGTTCCGCTACAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLLNQRL*SSATAR Trigger: GCGGGCTGTAGCGGAACTCAATAACCGCTGGTTCAA...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000167361.8 |
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| CDS-3UTR CAA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGTGCACAGCCTGCCCGTaGAACCAGCGGTTATTGAGT | + |
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Preference number: 5 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLCTACP*NQRLLS Trigger: ACTCAATAACCGCTGGTTCAACGGGCAGGCTGTGCA...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000167361.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGGGACAGGAGGAGGAGGTTCCTGTGTCGAACAGATTATATTATGAAGCTAAAGAGCAGTTAACCTaGTCCTTCTCAGTCCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: EEGQEEEVPVSNRLYYEAKEQLT*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAGGTTAACTGCTCTTT...AGCTTCATAATATAATCTGTTCGACACAGGAACCTCCTCCTCCTGTCCCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 ENSMUST00000166510.8 |
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| CDS-3UTR CAA 90 bp | ATTGACAAACTTCTTAACCTTTATTGGAGGAGGGACAGGAGGAGGAGGTTCCTGAAAGAGCAGTTAACCTaGTCCTTCTCAGTCCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: IDKLLNLYWRRDRRRRFLKEQLT*SFSVPN Trigger: ATTCGGGACTGAGAAGGACAAGGTTAACTGCTCTTT...CAGGAACCTCCTCCTCCTGTCCCTCCTCCAATAAAGGTTAAGAAGTTTGTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043273.16 ENSMUST00000163654.8 |
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| CDS TCA 72 bp | TCTGGGGAACGACGTCGGTTCCTTTCTCGGGGACGGTaGCCTGTGTGGGACCTTGGAGGTGACCTATGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SGERRRFLSRGR*PVWDLGGDLCP Trigger: CGGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163482.8 |
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| CDS TCA 72 bp | GACAGAAAGCAGGGCTGGCTGAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCCCCGTGCCGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DRKQGWLKVGLL*SREHRSPCRQA Trigger: AGCCTGCCGGCACGGGGACCGGTGCTCCCGACTTCACAACAAACCGACTTTCAGCCAGCCCTGCTTTCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168229.8 |
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| CDS CAA 72 bp | GGTTCCTTTCTCGGGGACGGTGACCTGTGTGGGACCTaGGAGGTGACCTATGCCCGCTCTGCATCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSFLGDGDLCGT*EVTYARSASSS Trigger: GGAGGAGGATGCAGAGCGGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163482.8 |
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| CDS CAA 90 bp | AGCTGCCGGCGCAAGTTCCGAGATATGGGCCGTAGGTGCATAAAGTaGCAGAAGCCACCTCGGGTGCATTCCTGCCGGCAGCAGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: SCRRKFRDMGRRCIK*QKPPRVHSCRQQDS Trigger: AGAGTCCTGCTGCCGGCAGGAATGCACCCGAGGTGGCTTCTGCAACTTTATGCACCTACGGCCCATATCTCGGAACTTGCGCCGGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163464.8 |
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| CDS TCA 72 bp | TCTGTGAATACCTCCTGGCTGAAAGTCGGTTTGTTGTaGAGTCGGGAGCACCGGTCCCCGTGCCGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVNTSWLKVGLL*SREHRSPCRQA Trigger: AGCCTGCCGGCACGGGGACCGGTGCTCCCGACTTCACAACAAACCGACTTTCAGCCAGGAGGTATTCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166257.8 |
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| CDS TCA 72 bp | TCTGGGGAACGACGTCGGTTCCTTTCTCGGGGACGGTaGCCTGTGTGGGACCTTGGAGGTGACCTTAACGTA | + |
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Preference number: 6 (lower is better) Translates to: SGERRRFLSRGR*PVWDLGGDLNV Trigger: TACGTTAAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167202.8 |
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| CDS CAA 72 bp | CGCAAGTTCCGAGATATGGGCCGTAGGTGCATAAAGTaGCAGAAGCCACCTCGGGTGCATTCCTGCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RKFRDMGRRCIK*QKPPRVHSCRQ Trigger: CTGCCGGCAGGAATGCACCCGAGGTGGCTTCTGCAACTTTATGCACCTACGGCCCATATCTCGGAACTTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163464.8 |
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| CDS TCA 72 bp | TGCAGTTCTGTGAATACCTCCTCCACGTCGCTCACGTaGCAGTGTGATCCATCTGCAGTTTGGGCTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: CSSVNTSSTSLT*QCDPSAVWAVF Trigger: GAACACAGCCCAAACTGCAGATGGATCACACTGTCACGTGAGCGACGTGGAGGAGGTATTCACAGAACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166510.8 |
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| CDS TCA 72 bp | TGTGAATACCTCCTCCACGTCGCTCACGTGACAGTGTaGTCCATCTGCAGTTTGGGCTGTGTTCTGTGGATT | + |
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Preference number: 6 (lower is better) Translates to: CEYLLHVAHVTV*SICSLGCVLWI Trigger: AATCCACAGAACACAGCCCAAACTGCAGATGGATCACACTGTCACGTGAGCGACGTGGAGGAGGTATTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166510.8 |
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