Pregenerated sensors for TYW3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047583Ensembl transcript IDs: ENSMUST00000052774.8, ENSMUST00000122976.2, ENSMUST00000170461.8
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGCCACACAGCACCAGGGCTTCCTGCCACGCCCTTCACCAGAGTaGAAACACAGCATTGTCCTGAGCATAGACAGTATCACAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: HATQHQGFLPRPSPE*KHSIVLSIDSITGA Trigger: AGCACCTGTGATACTGTCTATGCTCAGGACAATGCTGTGTTTGCACTCTGGTGAAGGGCGTGGCAGGAAGCCCTGGTGCTGTGTGGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR GCA 90 bp | CAGAGAATGCCTTCTAGTTCAGAGGCTAAAACCCAGGGTGGTCACTaGAGCTCAGGTCCCTTCCCTGTGGTGGTTCTACCTAGGGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: QRMPSSSEAKTQGGH*SSGPFPVVVLPRVP Trigger: GGGGACCCTAGGTAGAACCACCACAGGGAAGGGACCTGAGCTGCAGTGACCACCCTGGGTTTTAGCCTCTGAACTAGAAGGCATTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR GCA 90 bp | ATGCTTATACGTAACGTGCAGCTGCAGTTACAAGAGTGCAAGTTGTaGAAGGCACACGCCACACAGCACCAGGGCTTCCTGCCACGCCCT | + |
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Preference number: 1 (lower is better) Translates to: MLIRNVQLQLQECKL*KAHATQHQGFLPRP Trigger: AGGGCGTGGCAGGAAGCCCTGGTGCTGTGTGGCGTGTGCCTTGCACAACTTGCACTCTTGTAACTGCAGCTGCACGTTACGTATAAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | AATGCAAATTCTGAGCTGCCCTGTAAGAAAGGCTCAGGGTTGGAGTaGGGTTGTTCCCATGGCTCCAACTCGCATGCTCATGATGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: NANSELPCKKGSGLE*GCSHGSNSHAHDAE Trigger: CTCAGCATCATGAGCATGCGAGTTGGAGCCATGGGAACAACCTCACTCCAACCCTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR GCA 90 bp | GCAAGAGGAGACACTTGTCCAGGGCAAGAAATGCAAATTCTGAGCTaGCCTGTAAGAAAGGCTCAGGGTTGGAGTGAGGTTGTTCCCATG | + |
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Preference number: 1 (lower is better) Translates to: ARGDTCPGQEMQILS*PVRKAQGWSEVVPM Trigger: CATGGGAACAACCTCACTCCAACCCTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCATTTCTTGCCCTGGACAAGTGTCTCCTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR GCA 90 bp | AAAGCTTGTGGAACCTGGAGGAGTCAAACCTGGGCAGTGAATGGTTaGCCCAGGGAGAAGCAGAGAATGCCTTCTAGTTCAGAGGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: KACGTWRSQTWAVNG*PREKQRMPSSSEAK Trigger: TTTAGCCTCTGAACTAGAAGGCATTCTCTGCTTCTCCCTGGGGCAACCATTCACTGCCCAGGTTTGACTCCTCCAGGTTCCACAAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CCA 90 bp | AAGAACTCCAGAAACAAAGCTTGTGGAACCTGGAGGAGTCAAACCTaGGCAGTGAATGGTTGCCCCAGGGAGAAGCAGAGAATGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: KNSRNKACGTWRSQT*AVNGCPREKQRMPS Trigger: AGAAGGCATTCTCTGCTTCTCCCTGGGGCAACCATTCACTGCCCAGGTTTGACTCCTCCAGGTTCCACAAGCTTTGTTTCTGGAGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | GTCTGTCAGAGAGCTAGCAATGGGAAGGGTCTGAGGGGAACTGGATaGCTCTTTTCAAATGTTACAGCCAGAATGTGGCTGGCTGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: VCQRASNGKGLRGTG*LFSNVTARMWLAEC Trigger: ACACTCAGCCAGCCACATTCTGGCTGTAACATTTGAAAAGAGTCATCCAGTTCCCCTCAGACCCTTCCCATTGCTAGCTCTCTGACAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CCA 90 bp | CAAGAAATGCAAATTCTGAGCTGCCCTGTAAGAAAGGCTCAGGGTTaGAGTGAGGTTGTTCCCATGGCTCCAACTCGCATGCTCATGATG | + |
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Preference number: 1 (lower is better) Translates to: QEMQILSCPVRKAQG*SEVVPMAPTRMLMM Trigger: CATCATGAGCATGCGAGTTGGAGCCATGGGAACAACCTCACTCCAACCCTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCATTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR GCA 90 bp | TGCAAACACAGCATTGTCCTGAGCATAGACAGTATCACAGGTGCTTaGTCATCTAAGGAATCCACAGAAACCTACAGGGCAGGTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: CKHSIVLSIDSITGA*SSKESTETYRAGVL Trigger: GAGCACACCTGCCCTGTAGGTTTCTGTGGATTCCTTAGATGAGCAAGCACCTGTGATACTGTCTATGCTCAGGACAATGCTGTGTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CCA 90 bp | GGGGAACTGGATGACTCTTTTCAAATGTTACAGCCAGAATGTGGCTaGCTGAGTGTCATGTGGGATGTGTGCCTCCAACAACCCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: GELDDSFQMLQPECG*LSVMWDVCLQQPKF Trigger: AAACTTGGGTTGTTGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATTTGAAAAGAGTCATCCAGTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | GTGGTCGATGGGCCCTGCGCTTTTCCTTGGCTCCGCCTATTCTTATaGGTACAAAGTGGGTTATTTCTCTCTTTGATCTTGGAATGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VVDGPCAFPWLRLFL*VQSGLFLSLILECE Trigger: CTCACATTCCAAGATCAAAGAGAGAAATAACCCACTTTGTACTCATAAGAATAGGCGGAGCCAAGGAAAAGCGCAGGGCCCATCGACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
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| 3UTR CCA 90 bp | GAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATGTCTaGTCCAAGAACTCCAGAAACAAAGCTTGTGGAACCTGGAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: EPHETYLLGHNLVDV*SKNSRNKACGTWRS Trigger: ACTCCTCCAGGTTCCACAAGCTTTGTTTCTGGAGTTCTTGGACCAGACATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | AACTGGATGACTCTTTTCAAATGTTACAGCCAGAATGTGGCTGGCTaGGTGTCATGTGGGATGTGTGCCTCCAACAACCCAAGTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: NWMTLFKCYSQNVAG*VSCGMCASNNPSFP Trigger: TGGAAAACTTGGGTTGTTGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATTTGAAAAGAGTCATCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | CCAACTAATGAGGTGTCTGTCAGAGAGCTAGCAATGGGAAGGGTCTaGGGGGAACTGGATGACTCTTTTCAAATGTTACAGCCAGAATGT | + |
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Preference number: 1 (lower is better) Translates to: PTNEVSVRELAMGRV*GELDDSFQMLQPEC Trigger: ACATTCTGGCTGTAACATTTGAAAAGAGTCATCCAGTTCCCCTCAGACCCTTCCCATTGCTAGCTCTCTGACAGACACCTCATTAGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | CTGTCTGGAATAAGCCGGTCAGGAAGGGTTCCTAAAATGCCGACTTaGAATTGCCAGTATTTGAAATCACCTGACTCAGGAGATGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LSGISRSGRVPKMPT*NCQYLKSPDSGDVL Trigger: AAGCACATCTCCTGAGTCAGGTGATTTCAAATACTGGCAATTTCAAGTCGGCATTTTAGGAACCCTTCCTGACCGGCTTATTCCAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR GCA 90 bp | ACAGCAGGTGTTAGAAGAAATGGAAACCCACAAAATGAAATGGTTTaGTACAGGACCTCTGATGTCAGAACTCAAGTCCTAACCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: TAGVRRNGNPQNEMV*YRTSDVRTQVLTLQ Trigger: TTGAAGGGTTAGGACTTGAGTTCTGACATCAGAGGTCCTGTAGCAAACCATTTCATTTTGTGGGTTTCCATTTCTTCTAACACCTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CCA 90 bp | CTATTTGAATCCCTGTTAGGACCCACCCACATGTGCAAAGCACCATaGTGGGGTAGGAATATATTTTTATTGTATTCCTTGCATAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LFESLLGPTHMCKAP*WGRNIFLLYSLHSS Trigger: ACTGCTATGCAAGGAATACAATAAAAATATATTCCTACCCCACCATGGTGCTTTGCACATGTGGGTGGGTCCTAACAGGGATTCAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | CTGTCTGGAATAAGCCGGTCAGGAAGGGTTCCTAAAATGCCGACTTaGCTGACTTTACTTACAGATTTAAGAAAAATAAAGATGACAGTT | + |
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Preference number: 1 (lower is better) Translates to: LSGISRSGRVPKMPT*LTLLTDLRKIKMTV Trigger: AACTGTCATCTTTATTTTTCTTAAATCTGTAAGTAAAGTCAGTCAAGTCGGCATTTTAGGAACCCTTCCTGACCGGCTTATTCCAGACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CCA 90 bp | GTGGTAGCTATCTTCAAATTCCTAAACATCGTTATACAAAGGGCTTaGCATTTTGATCTTGCATCCGTAGGAATTGTAGCAGTTTATCTT | + |
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Preference number: 1 (lower is better) Translates to: VVAIFKFLNIVIQRA*HFDLASVGIVAVYL Trigger: AAGATAAACTGCTACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAATTTGAAGATAGCTACCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR TCA 90 bp | TATCTTCAAATTCCTAAACATCGTTATACAAAGGGCTTGGCATTTTaGTCTTGCATCCGTAGGAATTGTAGCAGTTTATCTTTTTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: YLQIPKHRYTKGLAF*SCIRRNCSSLSFCP Trigger: AGGACAAAAAGATAAACTGCTACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAATTTGAAGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCGCTCATGGGGCTTCTTCTCGTGCTGTCTGGAATAAGCCGGTCAGGAAGGGCTCAGGGTTGGAGTaGGGTTGTTCCCATGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ASAHGASSRAVWNKPVRKGSGLE*GCSHGS Trigger: GGAGCCATGGGAACAACCTCACTCCAACCCTGAGCC...CTTCCTGACCGGCTTATTCCAGACAGCACGAGAAGAAGCCCCATGAGCGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGCTTCCTGCCACGCCCTTCACCAGAGTGCAAACACAGCATTGTCCTGAGCGGCCTCTGCTCCCATaGTGCTCCCTGATGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PGLPATPFTRVQTQHCPERPLLP*CSLMLS Trigger: TGACAGCATCAGGGAGCATCATGGGAGCAGAGGCCG...CTCAGGACAATGCTGTGTTTGCACTCTGGTGAAGGGCGTGGCAGGAAGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTGCTCATCTAAGGAATCCACAGAAACCTACAGGGCAGGTGTGCTCCAGCCGGCCTCTGCTCCCATaGTGCTCCCTGATGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: VLAHLRNPQKPTGQVCSSRPLLP*CSLMLS Trigger: TGACAGCATCAGGGAGCATCATGGGAGCAGAGGCCG...GCTGGAGCACACCTGCCCTGTAGGTTTCTGTGGATTCCTTAGATGAGCAAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | CCACAGAAACCTACAGGGCAGGTGTGCTCCAGCCTCCGCTCATGGGGCTTCTTCTGCAATGTGACAAGTTaGCTCAAGCTCCTGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PQKPTGQVCSSLRSWGFFCNVTS*LKLLLP Trigger: TGGCAGCAGGAGCTTGAGGCAACTTGTCACATTGCA...GAAGAAGCCCCATGAGCGGAGGCTGGAGCACACCTGCCCTGTAGGTTTCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTTACAGCCAGAATGTGGCTGGCTGAGTGTCATGTGGGATGTGTGCCTCCAAGCACCAGGGCTTCCTaGCACGCCCTTCACCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: NVTARMWLAECHVGCVPPSTRAS*HALHQS Trigger: ACTCTGGTGAAGGGCGTGGCAGGAAGCCCTGGTGCT...TGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGATCACACTTGTCTGCTCCAGCCTCCGCTCATGGGGCTTCTTCTCGTGCTGTGCTCACTTCCTATCTaGTCCAGTCATCCCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ADHTCLLQPPLMGLLLVLCSLPI*SSHPSS Trigger: ACTTGAGGGATGACTGGATCAGATAGGAAGTGAGCA...CAGCACGAGAAGAAGCCCCATGAGCGGAGGCTGGAGCAGACAAGTGTGATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCTCATGTGAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATGCCTACAGGGCAGGTGTaGTCCAGCCTCCGCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: HPHVSHMKRICLAITWLMPTGQV*SSLRSW Trigger: CCATGAGCGGAGGCTGGAGCACACCTGCCCTGTAGG...CATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CAA 90 bp | AAATCACCTGACTCAGGAGATGTGCTTGTGCTAAGCAGATCACACTaGTCTGCTCCAGCCTCCGCTCATGGGGCTTCTTCTCGTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: KSPDSGDVLVLSRSH*SAPASAHGASSRAV Trigger: GACAGCACGAGAAGAAGCCCCATGAGCGGAGGCTGGAGCAGACAAGTGTGATCTGCTTAGCACAAGCACATCTCCTGAGTCAGGTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGCAGATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATGGCTCAGGGTTGGAGTaGGGTTGTTCCCATGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: AKQITLVCSRASQTSDLYGSGLE*GCSHGS Trigger: GGAGCCATGGGAACAACCTCACTCCAACCCTGAGCC...ATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGAACCTGGAGGAGTCAAACCTGGGCAGTGAATGGTTGCCCCAGGGAGAAGGCATTTGAAATCGCCTaGCTCAGGAGATGTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: CGTWRSQTWAVNGCPREKAFEIA*LRRCAC Trigger: ACAAGCACATCTCCTGAGTCAGGCGATTTCAAATGC...CTTCTCCCTGGGGCAACCATTCACTGCCCAGGTTTGACTCCTCCAGGTTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTTACAGCCAGAATGTGGCTGGCTGAGTGTCATGTGGGATGTGTGCCTCCAGTCTCCCAGGAAGAGTaGAGCACTGATTTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NVTARMWLAECHVGCVPPVSQEE*STDFQA Trigger: GGCCTGGAAATCAGTGCTGCACTCTTCCTGGGAGAC...TGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTCATGTGAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATGTCCCTTCCCTGTGGTaGTTCTACCTAGGGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: PPSCEPHETYLLGHNLVDVPSLW*FYLGSP Trigger: GGGGGACCCTAGGTAGAACCACCACAGGGAAGGGAC...ATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATCACACTTGTCTGCTCCAGCCTCCGCTCATGGGGCTTCTTCTCGTGCTGTATGCAAATTCTGAGCTaGCCTGTAAGAAAGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QITLVCSSLRSWGFFSCCMQILS*PVRKAQ Trigger: CTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCAT...ACAGCACGAGAAGAAGCCCCATGAGCGGAGGCTGGAGCAGACAAGTGTGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGTTAGGACCCACCCACATGTGCAAAGCACCATGGTGGGGTAGGAATATACAAGAGTGCAAGTTGTaGAAGGCACACGCCACACAG | + |
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Preference number: 2 (lower is better) Translates to: SLLGPTHMCKAPWWGRNIQECKL*KAHATQ Trigger: CTGTGTGGCGTGTGCCTTGCACAACTTGCACTCTTG...TATATTCCTACCCCACCATGGTGCTTTGCACATGTGGGTGGGTCCTAACAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGTTGTTCCCATGGCTCCAACTCGCATGCTCATGATGCTGAGGCCACCTCAGGCACAGGTATTTCCCTaGACAAAATACTCACGTGTA | + |
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Preference number: 2 (lower is better) Translates to: EVVPMAPTRMLMMLRPPQAQVFP*TKYSRV Trigger: TACACGTGAGTATTTTGTTCAGGGAAATACCTGTGC...CTGAGGTGGCCTCAGCATCATGAGCATGCGAGTTGGAGCCATGGGAACAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | CAGATCACACTTGTCTGCTCCAGCCTCCGCTCATGGGGCTTCTTCTCGTGCTGTATGTCTGTGTCTTGGTaGTCATTCCTAAGCAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: QITLVCSSLRSWGFFSCCMSVSW*SFLSKL Trigger: AAGCTTGCTTAGGAATGATCACCAAGACACAGACAT...ACAGCACGAGAAGAAGCCCCATGAGCGGAGGCTGGAGCAGACAAGTGTGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | CCGCTCATGGGGCTTCTTCTCGTGCTGTCTGGAATAAGCCGGTCAGGAAGGGTTTCACCTTCCCTTCAATaGGGAAAAATGGTAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: PLMGLLLVLSGISRSGRVSPSLQ*GKMVML Trigger: CAGCATTACCATTTTTCCTCATTGAAGGGAAGGTGA...AACCCTTCCTGACCGGCTTATTCCAGACAGCACGAGAAGAAGCCCCATGAGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCGCTCATGGGGCTTCTTCTCGTGCTGTCTGGAATAAGCCGGTCAGGAAGCAAAATGAAATGGTTTaGTACAGGACCTCTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: ASAHGASSRAVWNKPVRKQNEMV*YRTSDV Trigger: GACATCAGAGGTCCTGTAGCAAACCATTTCATTTTG...CTTCCTGACCGGCTTATTCCAGACAGCACGAGAAGAAGCCCCATGAGCGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCAGGGCAAGAAATGCAAATTCTGAGCTGCCCTGTAAGAAAGGCTCAGGGGTGAGGTTGTTCCCATaGCTCCAACTCGCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LSRARNANSELPCKKGSGVRLFP*LQLACS Trigger: TGAGCATGCGAGTTGGAGCCATGGGAACAACCTCAC...CCCTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCATTTCTTGCCCTGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCAACTCGCATGCTCATGATGCTGAGGCCACCTCAGAGAAGAAGTAACCTTAGAAAGGCTCAGGGTTaGAGTGAGGTTGTTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: APTRMLMMLRPPQRRSNLRKAQG*SEVVPM Trigger: CATGGGAACAACCTCACTCCAACCCTGAGCCTTTCT...AAGGTTACTTCTTCTCTGAGGTGGCCTCAGCATCATGAGCATGCGAGTTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CAA 90 bp | AAATCGCCTGACTCAGGAGATGTGCTTGTGCTAAGCAGATCACACTaGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATGGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: KSPDSGDVLVLSRSH*SAPGLLKLLTCMGN Trigger: GTTGCCCATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAGCACAAGCACATCTCCTGAGTCAGGCGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR CCA 90 bp | AGACTATTGCTGGCCAATGCTCACTTCCTATCTGATCCAGTCATCCCTCAAGTGGTGAGGTTGTTCCCATaGCTCCAACTCGCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RLLLANAHFLSDPVIPQVVRLFP*LQLACS Trigger: TGAGCATGCGAGTTGGAGCCATGGGAACAACCTCAC...CACTTGAGGGATGACTGGATCAGATAGGAAGTGAGCATTGGCCAGCAATAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTCATGTGAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATCCCCAGTTCCCTACCTaGCAGCAAGCTGTATATGCT | + |
|
Preference number: 2 (lower is better) Translates to: PPSCEPHETYLLGHNLVDPQFPT*QQAVYA Trigger: AGCATATACAGCTTGCTGCCAGGTAGGGAACTGGGG...ATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACCCTCATGTGAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATTCCCATGATGCTCCCTaGTGCTGTCAATGCCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: PPSCEPHETYLLGHNLVDSHDAP*CCQCHL Trigger: AAGATGGCATTGACAGCATCAGGGAGCATCATGGGA...ATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTTGCTCATCTAAGGAATCCACAGAAACCTACAGGGCAGGTGTGCTCCAGCGAAATTGCCAGTATTTaGAATCACCTGACTCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLAHLRNPQKPTGQVCSSEIASI*NHLTQE Trigger: CTCCTGAGTCAGGTGATTTCAAATACTGGCAATTTC...GCTGGAGCACACCTGCCCTGTAGGTTTCTGTGGATTCCTTAGATGAGCAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 90 bp | CCCCACCACCACCACTACCACCATGCTGGCTGTTCTGTTTACATGTaGTCACTCCTTCTGACTGCTTACCTGGCAGATCATTTAGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: PHHHHYHHAGCSVYM*SLLLTAYLADHLDF Trigger: AAAATCTAAATGATCTGCCAGGTAAGCAGTCAGAAGGAGTGACAACATGTAAACAGAACAGCCAGCATGGTGGTAGTGGTGGTGGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 90 bp | CCTATGCTCAGAGTATCTTGCTCTATGGTGTTAGAGGTGGCTCTGTaGGTAGAGTGCTTGCCTGGTGTATACCAAAGCCTTGGGTTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PMLRVSCSMVLEVAL*VECLPGVYQSLGFD Trigger: ATCAAACCCAAGGCTTTGGTATACACCAGGCAAGCACTCTACCAACAGAGCCACCTCTAACACCATAGAGCAAGATACTCTGAGCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTGTTAGGACCCACCCACATGTGCAAAGCACCATGGTGGGGTAGGAATATATCACCTTCCCTTCAATaGGGAAAAATGGTAATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLLGPTHMCKAPWWGRNISPSLQ*GKMVML Trigger: CAGCATTACCATTTTTCCTCATTGAAGGGAAGGTGA...TATATTCCTACCCCACCATGGTGCTTTGCACATGTGGGTGGGTCCTAACAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCCTCATGTGAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATGGGCTTCTCAAACTTCTaGCCTGTATGGGCAACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HPHVSHMKRICLAITWLMGFSNF*PVWATV Trigger: AACAGTTGCCCATACAGGTCAGAAGTTTGAGAAGCC...CATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTTACAGCCAGAATGTGGCTGGCTGAGTGTCATGTGGGATGTGTGCCTCCACTGAGGGGAACTGGATaGCTCTTTTCAAATGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: NVTARMWLAECHVGCVPPLRGTG*LFSNVT Trigger: TGTAACATTTGAAAAGAGTCATCCAGTTCCCCTCAG...TGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCATGCCTGCATGAACTAGAGACAATGCTAAATATACCAAATACCATCTCACAGGTCCCTTCCCTGTaGTGGTTCTACCTAGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GSCLHELETMLNIPNTISQVPSL*WFYLGS Trigger: GGACCCTAGGTAGAACCACCACAGGGAAGGGACCTG...TGAGATGGTATTTGGTATATTTAGCATTGTCTCTAGTTCATGCAGGCATGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGTTACAGCCAGAATGTGGCTGGCTGAGTGTCATGTGGGATGTGTGCCTCCAAACTTGGTTGATGTCTaGTCCAAGAACTCCAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: NVTARMWLAECHVGCVPPNLVDV*SKNSRN Trigger: GTTTCTGGAGTTCTTGGACCAGACATCAACCAAGTT...TGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGCAGATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATGATGCAAATTCTGAGCTaGCCTGTAAGAAAGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSRSHLSAPGLLKLLTCMMQILS*PVRKAQ Trigger: CTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCAT...CATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTAAGCAGATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATATGTGTCTGGACATCTaGCTGACAAAGGTTGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: AKQITLVCSRASQTSDLYMCLDI*LTKVEL Trigger: AAGTTCAACCTTTGTCAGTCAGATGTCCAGACACAT...ATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCTTCTCAAACTTCTGACCTGTATGGGCAACTGTTCACATGTGTTCATATCGGCTTCTCAAACTTCTaGCCTGTATGGGCAACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: RASQTSDLYGQLFTCVHIGFSNF*PVWATV Trigger: AACAGTTGCCCATACAGGTCAGAAGTTTGAGAAGCC...GATATGAACACATGTGAACAGTTGCCCATACAGGTCAGAAGTTTGAGAAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCCTCATGTGAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATGGAAATTGCCAGTATTTaGAATCACCTGACTCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HPHVSHMKRICLAITWLMEIASI*NHLTQE Trigger: CTCCTGAGTCAGGTGATTTCAAATACTGGCAATTTC...CATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCATGCCTGCATGAACTAGAGACAATGCTAAATATACCAAATACCATCTCACAGAATGTGGCTGGCTaGGTGTCATGTGGGATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GSCLHELETMLNIPNTISQNVAG*VSCGMC Trigger: ACACATCCCACATGACACTCAGCCAGCCACATTCTG...TGAGATGGTATTTGGTATATTTAGCATTGTCTCTAGTTCATGCAGGCATGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCCTAATAAAAGTTTAAGAAGTAATGTGTCTGGACATCTGACTGACAAAGGTCCAGAGACGACACTGTaGCAGGCCTCAGTCGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: HPNKSLRSNVSGHLTDKGPETTL*QASVVS Trigger: GGAGACGACTGAGGCCTGGCACAGTGTCGTCTCTGG...ACCTTTGTCAGTCAGATGTCCAGACACATTACTTCTTAAACTTTTATTAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCCTTTCCCTACCCCAGTTCCCTACCTGGCAGCAAGCTGTATATGCTTATTCAATGCCATCTTCATaGCTGGTACATTTGAAAACG | + |
|
Preference number: 2 (lower is better) Translates to: SFLSLPQFPTWQQAVYAYSMPSS*LVHLKT Trigger: CGTTTTCAAATGTACCAGTCATGAAGATGGCATTGA...ATAAGCATATACAGCTTGCTGCCAGGTAGGGAACTGGGGTAGGGAAAGGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCATGCCTGCATGAACTAGAGACAATGCTAAATATACCAAATACCATCTCATCCCATGATGCTCCCTaGTGCTGTCAATGCCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: GSCLHELETMLNIPNTISSHDAP*CCQCHL Trigger: AAGATGGCATTGACAGCATCAGGGAGCATCATGGGA...TGAGATGGTATTTGGTATATTTAGCATTGTCTCTAGTTCATGCAGGCATGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | AACATCGTTATACAAAGGGCTTGGCATTTTGATCTTGCATCCGTAGGAATTGTACAGAATGTGGCTGGCTaGGTGTCATGTGGGATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NIVIQRAWHFDLASVGIVQNVAG*VSCGMC Trigger: ACACATCCCACATGACACTCAGCCAGCCACATTCTG...TACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCCAGGGCAAGAAATGCAAATTCTGAGCTGCCCTGTAAGAAAGGCTCAGGGGGTTATTTCTCTCTTTaGTCTTGGAATGTGAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSRARNANSELPCKKGSGGYFSL*SWNVSL Trigger: CAAACTCACATTCCAAGATCAAAGAGAGAAATAACC...CCCTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCATTTCTTGCCCTGGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCCTTTCCCTACCCCAGTTCCCTACCTGGCAGCAAGCTGTATATGCTTATACTCCGCCTATTCTTATaGGTACAAAGTGGGTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: VSFPYPSSLPGSKLYMLILRLFL*VQSGLF Trigger: AAATAACCCACTTTGTACTCATAAGAATAGGCGGAG...TATAAGCATATACAGCTTGCTGCCAGGTAGGGAACTGGGGTAGGGAAAGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTAGCTATCTTCAAATTCCTAAACATCGTTATACAAAGGGCTTGGCATTTTTGGGCAGTGAATGGTTaGCCCAGGGAGAAGCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VVAIFKFLNIVIQRAWHFWAVNG*PREKQR Trigger: TCTCTGCTTCTCCCTGGGGCAACCATTCACTGCCCA...AAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAATTTGAAGATAGCTACCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCATGCCTGCATGAACTAGAGACAATGCTAAATATACCAAATACCATCTCAAGAAAGGCTCAGGGTTaGAGTGAGGTTGTTCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: GSCLHELETMLNIPNTISRKAQG*SEVVPM Trigger: CATGGGAACAACCTCACTCCAACCCTGAGCCTTTCT...TGAGATGGTATTTGGTATATTTAGCATTGTCTCTAGTTCATGCAGGCATGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | AACATCGTTATACAAAGGGCTTGGCATTTTGATCTTGCATCCGTAGGAATTGTACAGATCACACTTGTCTaGTCCAGGGCTTCTCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: NIVIQRAWHFDLASVGIVQITLV*SRASQT Trigger: AGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTG...TACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAGCTATCTTCAAATTCCTAAACATCGTTATACAAAGGGCTTGGCATTTTCCTTCCTTTCCAGCTTaGCGGCATTTGAAATCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VVAIFKFLNIVIQRAWHFPSFPA*RHLKSP Trigger: AGGCGATTTCAAATGCCGGCAAGCTGGAAAGGAAGG...AAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAATTTGAAGATAGCTACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCCTACGATACACTAATACAGTTAACAGGTTTGTTTCTCTCCAGTGTTTACGCCCTTCACCAGAGTaGAAACACAGCATTGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FVLRYTNTVNRFVSLQCLRPSPE*KHSIVL Trigger: CAGGACAATGCTGTGTTTGCACTCTGGTGAAGGGCG...TAAACACTGGAGAGAAACAAACCTGTTAACTGTATTAGTGTATCGTAGGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR GCA 90 bp | AACATCGTTATACAAAGGGCTTGGCATTTTGATCTTGCATCCGTAGGAATTGTAGTCATGTGGGATGTGTaGCTCCAACAACCCAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: NIVIQRAWHFDLASVGIVVMWDV*LQQPKF Trigger: AAACTTGGGTTGTTGGAGGCACACATCCCACATGAC...TACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTCTCAACCTaGATTTCATTCTTGGTGGTAGCTATCTTCAAATTCCTAAACATC | + |
|
Preference number: 2 (lower is better) Translates to: REREREREREREVST*ISFLVVAIFKFLNI Trigger: GATGTTTAGGAATTTGAAGATAGCTACCACCAAGAATGAAATCAAGGTTGAGACTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGTTCTGTTTTATGCGGATGTCTGTGTCTTGGTGATCATTCCTAAGCAAGCACAGGTATTTCCCTaGACAAAATACTCACGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TCVLFYADVCVLVIIPKQAQVFP*TKYSRV Trigger: TACACGTGAGTATTTTGTTCAGGGAAATACCTGTGC...TTGCTTAGGAATGATCACCAAGACACAGACATCCGCATAAAACAGAACACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCCTACGATACACTAATACAGTTAACAGGTTTGTTTCTCTCCAGTGTTTACCTTCCTTTCCAGCTTaGCGGCATTTGAAATCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: FVLRYTNTVNRFVSLQCLPSFPA*RHLKSP Trigger: AGGCGATTTCAAATGCCGGCAAGCTGGAAAGGAAGG...TAAACACTGGAGAGAAACAAACCTGTTAACTGTATTAGTGTATCGTAGGACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTAATAAAAGTTTAAGAAGTAATGTGTCTGGACATCTGACTGACAAAGGTTGCTCACTTCCTATCTaGTCCAGTCATCCCTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: HPNKSLRSNVSGHLTDKGCSLPI*SSHPSS Trigger: ACTTGAGGGATGACTGGATCAGATAGGAAGTGAGCA...ACCTTTGTCAGTCAGATGTCCAGACACATTACTTCTTAAACTTTTATTAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATGTGTTCTGTTTTATGCGGATGTCTGTGTCTTGGTGATCATTCCTAAGCAACAAAATGAAATGGTTTaGTACAGGACCTCTGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: TCVLFYADVCVLVIIPKQQNEMV*YRTSDV Trigger: GACATCAGAGGTCCTGTAGCAAACCATTTCATTTTG...TTGCTTAGGAATGATCACCAAGACACAGACATCCGCATAAAACAGAACACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR GCA 90 bp | AACATCGTTATACAAAGGGCTTGGCATTTTGATCTTGCATCCGTAGGAATTGTAGAAGGGTTCCTAAAATaGCGACTTGAAATTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: NIVIQRAWHFDLASVGIVEGFLK*RLEIAS Trigger: ACTGGCAATTTCAAGTCGGCATTTTAGGAACCCTTC...TACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAAGTCTCAACCTTGATTTCATTCTaGGTGGTAGCTATCTTCAAATTCCTAAACATCGTTATACAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: REREREREVSTLISF*VVAIFKFLNIVIQR Trigger: CCTTTGTATAACGATGTTTAGGAATTTGAAGATAGCTACCACCAAGAATGAAATCAAGGTTGAGACTTCTCTCTCTCTCTCTCTCTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTCCTACGATACACTAATACAGTTAACAGGTTTGTTTCTCTCCAGTGTTTAGGGTCTGAGGGGAACTaGATGACTCTTTTCAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: FVLRYTNTVNRFVSLQCLGSEGN*MTLFKC Trigger: ACATTTGAAAAGAGTCATCCAGTTCCCCTCAGACCC...TAAACACTGGAGAGAAACAAACCTGTTAACTGTATTAGTGTATCGTAGGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | CATCACCGTCTTCCAGCTCCCTCCCGTTGTCTTCAGTaGTCGATGGGCCCTGCGCTTTTCCTTGGCTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: HHRLPAPSRCLQ*SMGPALFLGSA Trigger: GGCGGAGCCAAGGAAAAGCGCAGGGCCCATCGACCACTGAAGACAACGGGAGGGAGCTGGAAGACGGTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | TGGGCGGCACCATCCCCTGGGCTCCCTGACTACGGATaGAATGTGACAAGTTGCCTCAAGCTCCTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WAAPSPGLPDYG*NVTSCLKLLLP Trigger: TGGCAGCAGGAGCTTGAGGCAACTTGTCACATTGCATCCGTAGTCAGGGAGCCCAGGGGATGGTGCCGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | TGTGCAAGGCACACGCCACACAGCACCAGGGCTTCCTaGCACGCCCTTCACCAGAGTGCAAACACAGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: CARHTPHSTRAS*HALHQSANTAL Trigger: CAATGCTGTGTTTGCACTCTGGTGAAGGGCGTGGCAGGAAGCCCTGGTGCTGTGTGGCGTGTGCCTTGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGCTTCCTGCCACGCCCTTCACCAGAGTGCAAACACAGCATTGTCCTGAGCCAGCTTGCCGGCATTaGAAATCGCCTGACTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGLPATPFTRVQTQHCPEPACRH*KSPDSG Trigger: TCCTGAGTCAGGCGATTTCAAATGCCGGCAAGCTGG...CTCAGGACAATGCTGTGTTTGCACTCTGGTGAAGGGCGTGGCAGGAAGCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | CCTGGGCTCCCTGACTACGGATGCAATGTGACAAGTTaGCTCAAGCTCCTGCTGCCAAAGCTAGAGACGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGLPDYGCNVTS*LKLLLPKLETA Trigger: GGCCGTCTCTAGCTTTGGCAGCAGGAGCTTGAGGCAACTTGTCACATTGCATCCGTAGTCAGGGAGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | ACACTGTGCCAGGCCTCAGTCGTCTCCCAGGAAGAGTaGAGCACTGATTTCCAGGCCATCACCGTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLCQASVVSQEE*STDFQAITVFQ Trigger: CTGGAAGACGGTGATGGCCTGGAAATCAGTGCTGCACTCTTCCTGGGAGACGACTGAGGCCTGGCACAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | CATCTAAGGAATCCACAGAAACCTACAGGGCAGGTGTaGTCCAGCCTCCGCTCATGGGGCTTCTTCTCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLRNPQKPTGQV*SSLRSWGFFSC Trigger: GCACGAGAAGAAGCCCCATGAGCGGAGGCTGGAGCACACCTGCCCTGTAGGTTTCTGTGGATTCCTTAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCCTGCCACGCCCTTCACCAGAGTGCAAACACAGCATTGTCCTGAGCATATTGCCTCCTGTAGGGTaGATGCCCTCAGCAAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GFLPRPSPECKHSIVLSILPPVG*MPSASL Trigger: AAGGCTTGCTGAGGGCATCAACCCTACAGGAGGCAA...TATGCTCAGGACAATGCTGTGTTTGCACTCTGGTGAAGGGCGTGGCAGGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | CAGCACCAGGGCTTCCTGCCACGCCCTTCACCAGAGTaGAAACACAGCATTGTCCTGAGCATAGACAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: QHQGFLPRPSPE*KHSIVLSIDSI Trigger: GATACTGTCTATGCTCAGGACAATGCTGTGTTTGCACTCTGGTGAAGGGCGTGGCAGGAAGCCCTGGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | CCTTCTAGTTCAGAGGCTAAAACCCAGGGTGGTCACTaGAGCTCAGGTCCCTTCCCTGTGGTGGTTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: PSSSEAKTQGGH*SSGPFPVVVLP Trigger: AGGTAGAACCACCACAGGGAAGGGACCTGAGCTGCAGTGACCACCCTGGGTTTTAGCCTCTGAACTAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | TCTGAGCTGCCCTGTAAGAAAGGCTCAGGGTTGGAGTaGGGTTGTTCCCATGGCTCCAACTCGCATGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SELPCKKGSGLE*GCSHGSNSHAH Trigger: ATGAGCATGCGAGTTGGAGCCATGGGAACAACCTCACTCCAACCCTGAGCCTTTCTTACAGGGCAGCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | AAGCTTGTGGAACCTGGAGGAGTCAAACCTGGGCAGTaGATGGTTGCCCCAGGGAGAAGCAGAGAATGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KLVEPGGVKPGQ*MVAPGRSRECL Trigger: AAGGCATTCTCTGCTTCTCCCTGGGGCAACCATTCACTGCCCAGGTTTGACTCCTCCAGGTTCCACAAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | GGAACCTGGAGGAGTCAAACCTGGGCAGTGAATGGTTaGCCCAGGGAGAAGCAGAGAATGCCTTCTAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTWRSQTWAVNG*PREKQRMPSSS Trigger: TGAACTAGAAGGCATTCTCTGCTTCTCCCTGGGGCAACCATTCACTGCCCAGGTTTGACTCCTCCAGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACTATTGCTGGCCAATGCTCACTTCCTATCTGATCCAGTCATCCCTCAAGTGTCCAGCTCCCTCCCGTaGTCTTCAGTGGTCGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: RLLLANAHFLSDPVIPQVSSSLP*SSVVDG Trigger: CCCATCGACCACTGAAGACAACGGGAGGGAGCTGGA...CACTTGAGGGATGACTGGATCAGATAGGAAGTGAGCATTGGCCAGCAATAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | CAAATTCTGAGCTGCCCTGTAAGAAAGGCTCAGGGTTaGAGTGAGGTTGTTCCCATGGCTCCAACTCGCATG | + |
|
Preference number: 3 (lower is better) Translates to: QILSCPVRKAQG*SEVVPMAPTRM Trigger: CATGCGAGTTGGAGCCATGGGAACAACCTCACTCCAACCCTGAGCCTTTCTTACAGGGCAGCTCAGAATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | AGAAACAAAGCTTGTGGAACCTGGAGGAGTCAAACCTaGGCAGTGAATGGTTGCCCCAGGGAGAAGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNKACGTWRSQT*AVNGCPREKQR Trigger: TCTCTGCTTCTCCCTGGGGCAACCATTCACTGCCCAGGTTTGACTCCTCCAGGTTCCACAAGCTTTGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTTTCCCTACCCCAGTTCCCTACCTGGCAGCAAGCTGTATATGCTTATATTGCCTCCTGTAGGGTaGATGCCCTCAGCAAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VSFPYPSSLPGSKLYMLILPPVG*MPSASL Trigger: AAGGCTTGCTGAGGGCATCAACCCTACAGGAGGCAA...TATAAGCATATACAGCTTGCTGCCAGGTAGGGAACTGGGGTAGGGAAAGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAAGCAGATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATAGGGTTGGAGTGAGGTaGTTCCCATGGCTCCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: AKQITLVCSRASQTSDLYRVGVR*FPWLQL Trigger: GAGTTGGAGCCATGGGAACAACCTCACTCCAACCCT...ATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAAGCAGATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATCTAAGCAGATCACACTaGTCTGCTCCAGGGCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AKQITLVCSRASQTSDLYLSRSH*SAPGLL Trigger: GAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAG...ATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | AAAGCTAGAGACGGCCTCTGCTCCCATGATGCTCCCTaGTGCTGTCAATGCCATCTTCATGACTGGTACATT | + |
|
Preference number: 3 (lower is better) Translates to: KARDGLCSHDAP*CCQCHLHDWYI Trigger: AATGTACCAGTCATGAAGATGGCATTGACAGCATCAGGGAGCATCATGGGAGCAGAGGCCGTCTCTAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | ACCTTCCTTTCCAGCTTGCCGGCATTTGAAATCGCCTaGCTCAGGAGATGTGCTTGTGCTAAGCAGATCACA | + |
|
Preference number: 3 (lower is better) Translates to: TFLSSLPAFEIA*LRRCACAKQIT Trigger: TGTGATCTGCTTAGCACAAGCACATCTCCTGAGTCAGGCGATTTCAAATGCCGGCAAGCTGGAAAGGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | GACACTTGTCCAGGGCAAGAAATGCAAATTCTGAGCTaGCCTGTAAGAAAGGCTCAGGGTTGGAGTGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: DTCPGQEMQILS*PVRKAQGWSEV Trigger: AACCTCACTCCAACCCTGAGCCTTTCTTACAGGGCAGCTCAGAATTTGCATTTCTTGCCCTGGACAAGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATGTGGGATGTGTGCCTCCAACAACCCAAGTTTTCCAATTAAAGGGAACAAGGGTTGGAGTGAGGTaGTTCCCATGGCTCCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: CHVGCVPPTTQVFQLKGTRVGVR*FPWLQL Trigger: GAGTTGGAGCCATGGGAACAACCTCACTCCAACCCT...TGTTCCCTTTAATTGGAAAACTTGGGTTGTTGGAGGCACACATCCCACATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTGATGTCTGGTCCAAGAACTCCAGAAACAAAGCTTGTGGAACCTGGAGGTTACAAGAGTGCAAGTaGTGCAAGGCACACGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LVDVWSKNSRNKACGTWRLQECK*CKAHAT Trigger: TGTGGCGTGTGCCTTGCACAACTTGCACTCTTGTAA...CCTCCAGGTTCCACAAGCTTTGTTTCTGGAGTTCTTGGACCAGACATCAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | ACTCTTTTCAAATGTTACAGCCAGAATGTGGCTGGCTaGGTGTCATGTGGGATGTGTGCCTCCAACAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLFKCYSQNVAG*VSCGMCASNNP Trigger: TGGGTTGTTGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATTTGAAAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | AGAGCTAGCAATGGGAAGGGTCTGAGGGGAACTGGATaGCTCTTTTCAAATGTTACAGCCAGAATGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RASNGKGLRGTG*LFSNVTARMWL Trigger: CAGCCACATTCTGGCTGTAACATTTGAAAAGAGTCATCCAGTTCCCCTCAGACCCTTCCCATTGCTAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | GAGGTGTCTGTCAGAGAGCTAGCAATGGGAAGGGTCTaGGGGGAACTGGATGACTCTTTTCAAATGTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: EVSVRELAMGRV*GELDDSFQMLQ Trigger: CTGTAACATTTGAAAAGAGTCATCCAGTTCCCCTCAGACCCTTCCCATTGCTAGCTCTCTGACAGACACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | ATGTTACAGCCAGAATGTGGCTGGCTGAGTGTCATGTaGGATGTGTGCCTCCAACAACCCAAGTTTTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: MLQPECGWLSVM*DVCLQQPKFSN Trigger: ATTGGAAAACTTGGGTTGTTGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | CTCAACACACCTACTTACTATGTAGAGTTGGCTTTCTaGGTGTGTGAGCTGTGCAGTTGCCTATGCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LNTPTYYVELAF*VCELCSCLCSE Trigger: CTCTGAGCATAGGCAACTGCACAGCTCACACACTCAGAAAGCCAACTCTACATAGTAAGTAGGTGTGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | GGGCCCTGCGCTTTTCCTTGGCTCCGCCTATTCTTATaGGTACAAAGTGGGTTATTTCTCTCTTTGATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GPCAFPWLRLFL*VQSGLFLSLIL Trigger: CAAGATCAAAGAGAGAAATAACCCACTTTGTACTCATAAGAATAGGCGGAGCCAAGGAAAAGCGCAGGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | GAAAACCACCCTCATGTGAGCCACATGAAACGTATCTaGTTGGCCATAACTTGGTTGATGTCTGGTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ENHPHVSHMKRI*LAITWLMSGPR Trigger: TCTTGGACCAGACATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | GATGACTCTTTTCAAATGTTACAGCCAGAATGTGGCTaGCTGAGTGTCATGTGGGATGTGTGCCTCCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: DDSFQMLQPECG*LSVMWDVCLQQ Trigger: TTGTTGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATTTGAAAAGAGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | GATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTaGCCTGTATGGGCAACTGTTCACATGTGTTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: DHTCLLQGFSNF*PVWATVHMCSY Trigger: ATATGAACACATGTGAACAGTTGCCCATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | AGAGTGCTTGCCTGGTGTATACCAAAGCCTTGGGTTTaGTTGGTTCTTAGCACATACATTGGATGTAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RVLAWCIPKPWV*LVLSTYIGCSG Trigger: GCCACTACATCCAATGTATGTGCTAAGAACCAATCAAACCCAAGGCTTTGGTATACACCAGGCAAGCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | ACCTACTTACTATGTAGAGTTGGCTTTCTGAGTGTGTaGGCTGTGCAGTTGCCTATGCTCAGAGTATCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TYLLCRVGFLSV*AVQLPMLRVSC Trigger: GCAAGATACTCTGAGCATAGGCAACTGCACAGCTCACACACTCAGAAAGCCAACTCTACATAGTAAGTAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTAGCTATCTTCAAATTCCTAAACATCGTTATACAAAGGGCTTGGCATTTTCCAGCTTGCCGGCATTaGAAATCGCCTGACTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VVAIFKFLNIVIQRAWHFPACRH*KSPDSG Trigger: TCCTGAGTCAGGCGATTTCAAATGCCGGCAAGCTGG...AAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAATTTGAAGATAGCTACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | TGCTTGCCTGGTGTATACCAAAGCCTTGGGTTTGATTaGTTCTTAGCACATACATTGGATGTAGTGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CLPGVYQSLGFD*FLAHTLDVVAH Trigger: ATGAGCCACTACATCCAATGTATGTGCTAAGAACCAATCAAACCCAAGGCTTTGGTATACACCAGGCAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | CATGTGTTCTGTTTTATGCGGATGTCTGTGTCTTGGTaGTCATTCCTAAGCAAGCTTAGAAAAAGCTACCCC | + |
|
Preference number: 3 (lower is better) Translates to: HVFCFMRMSVSW*SFLSKLRKSYP Trigger: GGGGTAGCTTTTTCTAAGCTTGCTTAGGAATGATCACCAAGACACAGACATCCGCATAAAACAGAACACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | ATGAGGAAAAATGGTAATGCTGCAATAGACTATTGCTaGCCAATGCTCACTTCCTATCTGATCCAGTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: MRKNGNAAIDYC*PMLTSYLIQSS Trigger: GGATGACTGGATCAGATAGGAAGTGAGCATTGGCCAGCAATAGTCTATTGCAGCATTACCATTTTTCCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCATGCCTGCATGAACTAGAGACAATGCTAAATATACCAAATACCATCTCATTGGCCATAACTTGGTaGATGTCTGGTCCAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GSCLHELETMLNIPNTISLAITW*MSGPRT Trigger: AGTTCTTGGACCAGACATCAACCAAGTTATGGCCAA...TGAGATGGTATTTGGTATATTTAGCATTGTCTCTAGTTCATGCAGGCATGAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | AACATCGTTATACAAAGGGCTTGGCATTTTGATCTTGCATCCGTAGGAATTGTATTGGCCATAACTTGGTaGATGTCTGGTCCAAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: NIVIQRAWHFDLASVGIVLAITW*MSGPRT Trigger: AGTTCTTGGACCAGACATCAACCAAGTTATGGCCAA...TACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCTTCTCAAACTTCTGACCTGTATGGGCAACTGTTCACATGTGTTCATATCGGGTTATTTCTCTCTTaGATCTTGGAATGTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RASQTSDLYGQLFTCVHIGLFLS*ILECEF Trigger: AAACTCACATTCCAAGATCAAAGAGAGAAATAACCC...GATATGAACACATGTGAACAGTTGCCCATACAGGTCAGAAGTTTGAGAAGCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | TTGGTTCTTAGCACATACATTGGATGTAGTGGCTCATaGCTGCATGAACTAGAGACAATGCTAAATATACCA | + |
|
Preference number: 3 (lower is better) Translates to: LVLSTYIGCSGS*LHELETMLNIP Trigger: TGGTATATTTAGCATTGTCTCTAGTTCATGCAGGCATGAGCCACTACATCCAATGTATGTGCTAAGAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR GCA 72 bp | TGGCTGTTCTGTTTACATGTTGTCACTCCTTCTGACTaGTTACCTGGCAGATCATTTAGATTTTATTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WLFCLHVVTPSD*LPGRSFRFYSV Trigger: TACTGAATAAAATCTAAATGATCTGCCAGGTAAGCAGTCAGAAGGAGTGACAACATGTAAACAGAACAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | GAGAGACAAAGTAGACAGAAGGCACAGGTATTTCCCTaGACAAAATACTCACGTGTATATCAGTTACTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ERQSRQKAQVFP*TKYSRVYQLLL Trigger: TAAAAGTAACTGATATACACGTGAGTATTTTGTTCAGGGAAATACCTGTGCCTTCTGTCTACTTTGTCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | ATAAGCCGGTCAGGAAGGGTTCCTAAAATGCCGACTTaGCTGACTTTACTTACAGATTTAAGAAAAATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISRSGRVPKMPT*LTLLTDLRKIK Trigger: CTTTATTTTTCTTAAATCTGTAAGTAAAGTCAGTCAAGTCGGCATTTTAGGAACCCTTCCTGACCGGCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR TCA 72 bp | ATTCCTAAACATCGTTATACAAAGGGCTTGGCATTTTaGTCTTGCATCCGTAGGAATTGTAGCAGTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: IPKHRYTKGLAF*SCIRRNCSSLS Trigger: AGATAAACTGCTACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CCA 72 bp | ATCTTCAAATTCCTAAACATCGTTATACAAAGGGCTTaGCATTTTGATCTTGCATCCGTAGGAATTGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IFKFLNIVIQRA*HFDLASVGIVA Trigger: TGCTACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAATTTGAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR GCA 90 bp | CAGATCACACTTGTCTGCTCCAGCCTCCGCTCATGGGGCTTCTTCTCGTGCTGTCTCCAGAGCCTTCTGTaGTCCCGTCCAGAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QITLVCSSLRSWGFFSCCLQSLL*SRPEGG Trigger: TCCTCCTTCTGGACGGGAGCACAGAAGGCTCTGGAG...ACAGCACGAGAAGAAGCCCCATGAGCGGAGGCTGGAGCAGACAAGTGTGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCTCAGCGGCTGCTAGCAGCAAGCTCTGGTGGTGAGAGACAAAGTAGACAGCGCAGGAGCTGGTGGTaGAAAACTCTTCCCGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQRLLAASSGGERQSRQRRSWW*KTLPAS Trigger: ACTCGCGGGAAGAGTTTTTCACCACCAGCTCCTGCG...CTGTCTACTTTGTCTCTCACCACCAGAGCTTGCTGCTAGCAGCCGCTGAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR GCA 90 bp | TCCCATGGCTCCAACTCGCATGCTCATGATGCTGAGGCCACCTCAGAGAAGAAGGTCTCCCAGGAAGAGTaGAGCACTGATTTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHGSNSHAHDAEATSEKKVSQEE*STDFQA Trigger: GGCCTGGAAATCAGTGCTGCACTCTTCCTGGGAGAC...CTTCTTCTCTGAGGTGGCCTCAGCATCATGAGCATGCGAGTTGGAGCCATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
||
| 3UTR CAA 72 bp | GACTCAGGAGATGTGCTTGTGCTAAGCAGATCACACTaGTCTGCTCCAGCCTCCGCTCATGGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSGDVLVLSRSH*SAPASAHGASS Trigger: AGAAGAAGCCCCATGAGCGGAGGCTGGAGCAGACAAGTGTGATCTGCTTAGCACAAGCACATCTCCTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGCAGATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATGAAGGAGGATGCGCCCTaGGCAGGAGCTGGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSRSHLSAPGLLKLLTCMKEDAP*AGAGGE Trigger: TTCACCACCAGCTCCTGCGCAGGGCGCATCCTCCTT...CATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGAAACCTACAGGGCAGGTGTGCTCCAGCCTCCGCTCATGGGGCTTCTTCCTCCGCCTATTCTTATaGGTACAAAGTGGGTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PQKPTGQVCSSLRSWGFFLRLFL*VQSGLF Trigger: AAATAACCCACTTTGTACTCATAAGAATAGGCGGAG...GAAGAAGCCCCATGAGCGGAGGCTGGAGCACACCTGCCCTGTAGGTTTCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
||
| CDS-3UTR GCA 90 bp | AGACTATTGCTGGCCAATGCTCACTTCCTATCTGATCCAGTCATCCCTCAAGTGCTCCAGAGCCTTCTGTaGTCCCGTCCAGAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLLANAHFLSDPVIPQVLQSLL*SRPEGG Trigger: TCCTCCTTCTGGACGGGAGCACAGAAGGCTCTGGAG...CACTTGAGGGATGACTGGATCAGATAGGAAGTGAGCATTGGCCAGCAATAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAGCAGATCACACTTGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGTATCAGCAGTGTTGCTTCTaGACTCCAGAGCCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQITLVCSRASQTSDLYQQCCF*TPEPSV Trigger: CACAGAAGGCTCTGGAGTTCAGAAGCAACACTGCTG...ATACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 72 bp | GACTCAGGAGATGTGCTTGTGCTAAGCAGATCACACTaGTCTGCTCCAGGGCTTCTCAAACTTCTGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DSGDVLVLSRSH*SAPGLLKLLTC Trigger: ACAGGTCAGAAGTTTGAGAAGCCCTGGAGCAGACAAGTGTGATCTGCTTAGCACAAGCACATCTCCTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR TCA 90 bp | TGTCATGTGGGATGTGTGCCTCCAACAACCCAAGTTTTCCAATTAAAGGGAACACAGCAGTGTTGCTTCTaGACTCCAGAGCCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CHVGCVPPTTQVFQLKGTQQCCF*TPEPSV Trigger: CACAGAAGGCTCTGGAGTTCAGAAGCAACACTGCTG...TGTTCCCTTTAATTGGAAAACTTGGGTTGTTGGAGGCACACATCCCACATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCCAAGAACTCCAGAAACAAAGCTTGTGGAACCTGGAGGAGTCAAACCTTGCAGTGTCCGGCATTaGACATGGAGGATAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGPRTPETKLVEPGGVKPCSVRH*TWRIKG Trigger: ACCTTTTATCCTCCATGTGCAATGCCGGACACTGCA...AGGTTTGACTCCTCCAGGTTCCACAAGCTTTGTTTCTGGAGTTCTTGGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR TCA 90 bp | AACATCGTTATACAAAGGGCTTGGCATTTTGATCTTGCATCCGTAGGAATTGTACGCAGGAGCTGGTGGTaGAAAACTCTTCCCGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NIVIQRAWHFDLASVGIVRRSWW*KTLPAS Trigger: ACTCGCGGGAAGAGTTTTTCACCACCAGCTCCTGCG...TACAATTCCTACGGATGCAAGATCAAAATGCCAAGCCCTTTGTATAACGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCCAAGAACTCCAGAAACAAAGCTTGTGGAACCTGGAGGAGTCAAACCTGGATCAGCTTTCCCTTGTaGGTTAATGGGACTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WSKNSRNKACGTWRSQTWISFPL*VNGTSN Trigger: ATTGGAAGTCCCATTAACCCACAAGGGAAAGCTGAT...CCAGGTTTGACTCCTCCAGGTTCCACAAGCTTTGTTTCTGGAGTTCTTGGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
||
| 3UTR CAA 72 bp | AACCACCCTCATGTGAGCCACATGAAACGTATCTGCTaGGCCATAACTTGGTTGATGTCTGGTCCAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NHPHVSHMKRIC*AITWLMSGPRT Trigger: AGTTCTTGGACCAGACATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 72 bp | AGAGTATCTTGCTCTATGGTGTTAGAGGTGGCTCTGTaGGTAGAGTGCTTGCCTGGTGTATACCAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVSCSMVLEVAL*VECLPGVYQSL Trigger: AAGGCTTTGGTATACACCAGGCAAGCACTCTACCAACAGAGCCACCTCTAACACCATAGAGCAAGATACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 72 bp | TTTTTGTCCTACGATACACTAATACAGTTAACAGGTTaGTTTCTCTCCAGTGTTTATCCGGGGCTTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FLSYDTLIQLTG*FLSSVYPGLAT Trigger: GGTGGCAAGCCCCGGATAAACACTGGAGAGAAACAAACCTGTTAACTGTATTAGTGTATCGTAGGACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAAGTCTCAACCTaGATTTCATTCTTGGTGGTAGCTATCTTCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: EREREREREVST*ISFLVVAIFKF Trigger: GAATTTGAAGATAGCTACCACCAAGAATGAAATCAAGGTTGAGACTTCTCTCTCTCTCTCTCTCTCTCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR GCA 90 bp | GTCACTCCTTCTGACTGCTTACCTGGCAGATCATTTAGATTTTATTCAGTAATTTGCAGTGTCCGGCATTaGACATGGAGGATAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTPSDCLPGRSFRFYSVICSVRH*TWRIKG Trigger: ACCTTTTATCCTCCATGTGCAATGCCGGACACTGCA...AATTACTGAATAAAATCTAAATGATCTGCCAGGTAAGCAGTCAGAAGGAGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| 3UTR CAA 72 bp | ACAAAGGTTGAACTTGTGACAGTTAATTTACTCGATTaGATGAGATTCGGAATCACCCAGGAGACATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKVELVTVNLLD*MRFGITQETYL Trigger: GAGGTATGTCTCCTGGGTGATTCCGAATCTCATCAAATCGAGTAAATTAACTGTCACAAGTTCAACCTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTAGCTATCTTCAAATTCCTAAACATCGTTATACAAAGGGCTTGGCATTTTGGTTATTTCTCTCTTTaGTCTTGGAATGTGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVAIFKFLNIVIQRAWHFGYFSL*SWNVSL Trigger: CAAACTCACATTCCAAGATCAAAGAGAGAAATAACC...AAAATGCCAAGCCCTTTGTATAACGATGTTTAGGAATTTGAAGATAGCTACCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
||
| CDS TCA 90 bp | TCAGACTCTGCGCCTTCCACCGGCCGAACTCCGCGCTACGGTCCATaGGCGAGCGAGCGAGCTGGGGTCGGCTTTCTGCTCTGGAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: SDSAPSTGRTPRYGP*ASERAGVGFLLWNA Trigger: CGCATTCCAGAGCAGAAAGCCGACCCCAGCTCGCTCGCTCGCTCATGGACCGTAGCGCGGAGTTCGGCCGGTGGAAGGCGCAGAGTCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS GCA 90 bp | TCGTCCACACTGCCCTTGCGGCTAAGGTCCGCCTTGCTCAGACTCTaGGCCTTCCACCGGCCGAACTCCGCGCTACGGTCCATGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSTLPLRLRSALLRL*AFHRPNSALRSMSE Trigger: CTCGCTCATGGACCGTAGCGCGGAGTTCGGCCGGTGGAAGGCGCAGAGTCTGAGCAAGGCGGACCTTAGCCGCAAGGGCAGTGTGGACGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS TCA 90 bp | TGCTCCCGTCCAGAAGGAGGATGCGCCCTGCGCAGGAGCTGGTGGTaGAAAACTCTTCCCGCGAGTTCAGGAGCTCCACCACCTCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: CSRPEGGCALRRSWW*KTLPASSGAPPPPP Trigger: CGGTGGAGGTGGTGGAGCTCCTGAACTCGCGGGAAGAGTTTTTCACCACCAGCTCCTGCGCAGGGCGCATCCTCCTTCTGGACGGGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS GCA 90 bp | AACTCCAGAGCCTTCTGTGCTCCCGTCCAGAAGGAGGATGCGCCCTaGGCAGGAGCTGGTGGTGAAAAACTCTTCCCGCGAGTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NSRAFCAPVQKEDAP*AGAGGEKLFPRVQE Trigger: CTCCTGAACTCGCGGGAAGAGTTTTTCACCACCAGCTCCTGCGCAGGGCGCATCCTCCTTCTGGACGGGAGCACAGAAGGCTCTGGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS TCA 90 bp | GCACACGGTTTGTGTGTGACCAGCAGCCAGCAGCAGTGTTGCTTCTaGACTCCAGAGCCTTCTGTGCTCCCGTCCAGAAGGAGGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AHGLCVTSSQQQCCF*TPEPSVLPSRRRMR Trigger: GCGCATCCTCCTTCTGGACGGGAGCACAGAAGGCTCTGGAGTTCAGAAGCAACACTGCTGCTGGCTGCTGGTCACACACAAACCGTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGAAACCTACAGGGCAGGTGTGCTCCAGCCTCCGCTCATGGGGCTTCTTCAAACAGCTTCGCTGGTaGCACCCTTCAGAGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQKPTGQVCSSLRSWGFFKQLRW*HPSELP Trigger: TGGCAGCTCTGAAGGGTGCAACCAGCGAAGCTGTTT...GAAGAAGCCCCATGAGCGGAGGCTGGAGCACACCTGCCCTGTAGGTTTCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS TCA 90 bp | CCTTCAGAGCTGCCATCACATCGTCTCTCGCACACGGTTTGTGTGTaGCCAGCAGCCAGCAGCAGTGTTGCTTCTGAACTCCAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSELPSHRLSHTVCV*PAASSSVASELQSL Trigger: AAGGCTCTGGAGTTCAGAAGCAACACTGCTGCTGGCTGCTGGTCACACACAAACCGTGTGCGAGAGACGATGTGATGGCAGCTCTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS TCA 90 bp | TCCCACGGTGATGCCAGAGTTCCTGAAGCCAGAATCAATTGCCACTaGGTGCAGGGTTTGTGCGTCCTGCAGTGTCCGGCATTGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: SHGDARVPEARINCH*VQGLCVLQCPALHM Trigger: CATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGCACTCAGTGGCAATTGATTCTGGCTTCAGGAACTCTGGCATCACCGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS GCA 90 bp | ACGGTGATGCCAGAGTTCCTGAAGCCAGAATCAATTGCCACTGAGTaGAGGGTTTGTGCGTCCTGCAGTGTCCGGCATTGCACATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVMPEFLKPESIATE*RVCASCSVRHCTWR Trigger: CCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGCACTCAGTGGCAATTGATTCTGGCTTCAGGAACTCTGGCATCACCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR CAA 90 bp | AATGTTACAGCCAGAATGTGGCTGGCTGAGTGTCATGTGGGATGTGTGCCTCCATCCAGCTCCCTCCCGTaGTCTTCAGTGGTCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: NVTARMWLAECHVGCVPPSSSLP*SSVVDG Trigger: CCCATCGACCACTGAAGACAACGGGAGGGAGCTGGA...TGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
||
| CDS-3UTR CAA 90 bp | AATGTTACAGCCAGAATGTGGCTGGCTGAGTGTCATGTGGGATGTGTGCCTCCAAAACAGCTTCGCTGGTaGCACCCTTCAGAGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVTARMWLAECHVGCVPPKQLRW*HPSELP Trigger: TGGCAGCTCTGAAGGGTGCAACCAGCGAAGCTGTTT...TGGAGGCACACATCCCACATGACACTCAGCCAGCCACATTCTGGCTGTAACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS CCA 90 bp | CGGACAGCCAGGGTTTGTGCGTCCTGCAGTGTCCGGCATTGCACATaGAGGATAAAAGGTTCAAACTTCAAAACAGCTTCGCTGGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTARVCASCSVRHCT*RIKGSNFKTASLVA Trigger: TGCAACCAGCGAAGCTGTTTTGAAGTTTGAACCTTTTATCCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGGCTGTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS GCA 90 bp | ATTGCCACTGAGTGCAGGGTTTGTGCGTCCTGCAGTGTCCGGCATTaGACATGGAGGATAAAAGGTTCAAACTTCAAAACAGCTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IATECRVCASCSVRH*TWRIKGSNFKTASL Trigger: CAGCGAAGCTGTTTTGAAGTTTGAACCTTTTATCCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGCACTCAGTGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR CAA 90 bp | CCACCCTCATGTGAGCCACATGAAACGTATCTGCTTGGCCATAACTTGGTTGATCTGCAGTGTCCGGCATaGCACATGGAGGATAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSCEPHETYLLGHNLVDLQCPA*HMEDKR Trigger: CCTTTTATCCTCCATGTGCAATGCCGGACACTGCAG...ATCAACCAAGTTATGGCCAAGCAGATACGTTTCATGTGGCTCACATGAGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTCCTTTCCCTACCCCAGTTCCCTACCTGGCAGCAAGCTGTATATGCTTATCTGCAGTGTCCGGCATaGCACATGGAGGATAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFLSLPQFPTWQQAVYAYLQCPA*HMEDKR Trigger: CCTTTTATCCTCCATGTGCAATGCCGGACACTGCAG...ATAAGCATATACAGCTTGCTGCCAGGTAGGGAACTGGGGTAGGGAAAGGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS CCA 90 bp | AACAGGAACTCAATATATTCCTCTGTCACCATCAGCTTTCCCTTGTaGGTTAATGGGACTTCCAATCCATGTGTACCCCGGACAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NRNSIYSSVTISFPL*VNGTSNPCVPRTAS Trigger: GCTGGCTGTCCGGGGTACACATGGATTGGAAGTCCCATTAACCCACAAGGGAAAGCTGATGGTGACAGAGGAATATATTGAGTTCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
||
| CDS-3UTR CAA 90 bp | CATCCTAATAAAAGTTTAAGAAGTAATGTGTCTGGACATCTGACTGACAAAGGTGGGTTATTTCTCTCTTaGATCTTGGAATGTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HPNKSLRSNVSGHLTDKGGLFLS*ILECEF Trigger: AAACTCACATTCCAAGATCAAAGAGAGAAATAACCC...ACCTTTGTCAGTCAGATGTCCAGACACATTACTTCTTAAACTTTTATTAGGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
||
| CDS TCA 72 bp | GCGCCTTCCACCGGCCGAACTCCGCGCTACGGTCCATaGGCGAGCGAGCGAGCTGGGGTCGGCTTTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: APSTGRTPRYGP*ASERAGVGFLL Trigger: GAGCAGAAAGCCGACCCCAGCTCGCTCGCTCGCTCATGGACCGTAGCGCGGAGTTCGGCCGGTGGAAGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS CAA 90 bp | TCCACCGCGTCCTCGTCCACACTGCCCTTGCGGCTAAGGTCCGCCTaGCTCAGACTCTGCGCCTTCCACCGGCCGAACTCCGCGCTACGG | + |
|
Preference number: 6 (lower is better) Translates to: STASSSTLPLRLRSA*LRLCAFHRPNSALR Trigger: CCGTAGCGCGGAGTTCGGCCGGTGGAAGGCGCAGAGTCTGAGCAAGGCGGACCTTAGCCGCAAGGGCAGTGTGGACGAGGACGCGGTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS GCA 72 bp | CTGCCCTTGCGGCTAAGGTCCGCCTTGCTCAGACTCTaGGCCTTCCACCGGCCGAACTCCGCGCTACGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPLRLRSALLRL*AFHRPNSALRS Trigger: GGACCGTAGCGCGGAGTTCGGCCGGTGGAAGGCGCAGAGTCTGAGCAAGGCGGACCTTAGCCGCAAGGGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS CAA 90 bp | TTCAGGAGCTCCACCACCTCCACCGCGTCCTCGTCCACACTGCCCTaGCGGCTAAGGTCCGCCTTGCTCAGACTCTGCGCCTTCCACCGG | + |
|
Preference number: 6 (lower is better) Translates to: FRSSTTSTASSSTLP*RLRSALLRLCAFHR Trigger: CCGGTGGAAGGCGCAGAGTCTGAGCAAGGCGGACCTTAGCCGCAAGGGCAGTGTGGACGAGGACGCGGTGGAGGTGGTGGAGCTCCTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS CAA 72 bp | TCCTCGTCCACACTGCCCTTGCGGCTAAGGTCCGCCTaGCTCAGACTCTGCGCCTTCCACCGGCCGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSTLPLRLRSA*LRLCAFHRPNS Trigger: GGAGTTCGGCCGGTGGAAGGCGCAGAGTCTGAGCAAGGCGGACCTTAGCCGCAAGGGCAGTGTGGACGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS GCA 72 bp | GTCCATGAGCGAGCGAGCGAGCTGGGGTCGGCTTTCTaGTCTGGAATGCGCCTTCTTCTCCATGGGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VHERASELGSAF*SGMRLLLHGRS Trigger: GCTGCGCCCATGGAGAAGAAGGCGCATTCCAGAGCAGAAAGCCGACCCCAGCTCGCTCGCTCGCTCATGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS GCA 72 bp | GCCTTCTGTGCTCCCGTCCAGAAGGAGGATGCGCCCTaGGCAGGAGCTGGTGGTGAAAAACTCTTCCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: AFCAPVQKEDAP*AGAGGEKLFPR Trigger: TCGCGGGAAGAGTTTTTCACCACCAGCTCCTGCGCAGGGCGCATCCTCCTTCTGGACGGGAGCACAGAAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS TCA 72 bp | CCAGAAGGAGGATGCGCCCTGCGCAGGAGCTGGTGGTaGAAAACTCTTCCCGCGAGTTCAGGAGCTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PEGGCALRRSWW*KTLPASSGAPP Trigger: TGGTGGAGCTCCTGAACTCGCGGGAAGAGTTTTTCACCACCAGCTCCTGCGCAGGGCGCATCCTCCTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS GCA 72 bp | AGCAGCAGTGTTGCTTCTGAACTCCAGAGCCTTCTGTaGTCCCGTCCAGAAGGAGGATGCGCCCTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSVASELQSLL*SRPEGGCALRR Trigger: CCTGCGCAGGGCGCATCCTCCTTCTGGACGGGAGCACAGAAGGCTCTGGAGTTCAGAAGCAACACTGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS CAA 90 bp | GTCTCTCGCACACGGTTTGTGTGTGACCAGCAGCCAGCAGCAGTGTaGCTTCTGAACTCCAGAGCCTTCTGTGCTCCCGTCCAGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSRTRFVCDQQPAAV*LLNSRAFCAPVQKE Trigger: CTCCTTCTGGACGGGAGCACAGAAGGCTCTGGAGTTCAGAAGCAACACTGCTGCTGGCTGCTGGTCACACACAAACCGTGTGCGAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS GCA 72 bp | TTCCAATCCATGTGTACCCCGGACAGCCAGGGTTTGTaGGTCCTGCAGTGTCCGGCATTGCACATGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FQSMCTPDSQGL*VLQCPALHMED Trigger: ATCCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGGCTGTCCGGGGTACACATGGATTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS TCA 72 bp | CTGCCATCACATCGTCTCTCGCACACGGTTTGTGTGTaGCCAGCAGCCAGCAGCAGTGTTGCTTCTGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSHRLSHTVCV*PAASSSVASEL Trigger: GAGTTCAGAAGCAACACTGCTGCTGGCTGCTGGTCACACACAAACCGTGTGCGAGAGACGATGTGATGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS GCA 72 bp | CCAGAGTTCCTGAAGCCAGAATCAATTGCCACTGAGTaGAGGGTTTGTGCGTCCTGCAGTGTCCGGCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: PEFLKPESIATE*RVCASCSVRHC Trigger: GCAATGCCGGACACTGCAGGACGCACAAACCCTGCACTCAGTGGCAATTGATTCTGGCTTCAGGAACTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS CAA 72 bp | GACAGCCAGGGTTTGTGCGTCCTGCAGTGTCCGGCATaGCACATGGAGGATAAAAGGTTCAAACTTCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: DSQGLCVLQCPA*HMEDKRFKLQN Trigger: GTTTTGAAGTTTGAACCTTTTATCCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS GCA 72 bp | GATAAAAGGTTCAAACTTCAAAACAGCTTCGCTGGTTaGACCCTTCAGAGCTGCCATCACATCGTCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: DKRFKLQNSFAG*TLQSCHHIVSR Trigger: GCGAGAGACGATGTGATGGCAGCTCTGAAGGGTGCAACCAGCGAAGCTGTTTTGAAGTTTGAACCTTTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
||
| CDS GCA 72 bp | GAGTGCAGGGTTTGTGCGTCCTGCAGTGTCCGGCATTaGACATGGAGGATAAAAGGTTCAAACTTCAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: ECRVCASCSVRH*TWRIKGSNFKT Trigger: TGTTTTGAAGTTTGAACCTTTTATCCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052774.8 ENSMUST00000170461.8 |
||
| CDS GCA 72 bp | ACAGCCAGGGTTTGTGCGTCCTGCAGTGTCCGGCATTaGACATGGAGGATAAAAGGTTCAAACTTCAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: TARVCASCSVRH*TWRIKGSNFKT Trigger: TGTTTTGAAGTTTGAACCTTTTATCCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCTGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122976.2 |
||
| CDS CCA 72 bp | AGGGTTTGTGCGTCCTGCAGTGTCCGGCATTGCACATaGAGGATAAAAGGTTCAAACTTCAAAACAGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RVCASCSVRHCT*RIKGSNFKTAS Trigger: CGAAGCTGTTTTGAAGTTTGAACCTTTTATCCTCCATGTGCAATGCCGGACACTGCAGGACGCACAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052774.8 ENSMUST00000122976.2 ENSMUST00000170461.8 |
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| CDS CAA 90 bp | GTTAACAGGAACTCAATATATTCCTCTGTCACCATCAGCTTTCCCTaGTGGGTTAATGGGACTTCCAATCCATGTGTACCCCGGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: VNRNSIYSSVTISFP*WVNGTSNPCVPRTA Trigger: GGCTGTCCGGGGTACACATGGATTGGAAGTCCCATTAACCCACAAGGGAAAGCTGATGGTGACAGAGGAATATATTGAGTTCCTGTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
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| CDS CAA 72 bp | AACTCAATATATTCCTCTGTCACCATCAGCTTTCCCTaGTGGGTTAATGGGACTTCCAATCCATGTGTACCC | + |
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Preference number: 6 (lower is better) Translates to: NSIYSSVTISFP*WVNGTSNPCVP Trigger: GGGTACACATGGATTGGAAGTCCCATTAACCCACAAGGGAAAGCTGATGGTGACAGAGGAATATATTGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052774.8 |
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