Pregenerated sensors for TYRP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005994Ensembl transcript IDs: ENSMUST00000006151.13, ENSMUST00000102831.8, ENSMUST00000133655.8, ENSMUST00000133932.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATCTATCTTGGGAAGAAAAGAAGGAAGCCAAAGGAAATACGGTTaGCAGCTGTGTTTCAATCAGGTTGCTTCCCAACCTGCTGCGTGC | + |
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Preference number: 1 (lower is better) Translates to: TSILGRKEGSQRKYG*QLCFNQVASQPAAC Trigger: GCACGCAGCAGGTTGGGAAGCAACCTGATTGAAACACAGCTGTCAACCGTATTTCCTTTGGCTTCCTTCTTTTCTTCCCAAGATAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR TCA 90 bp | AATGAAATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTaGCTGATACCTTCCTCGCAGGCCTCTAAGATACGAGAATTAGAG | + |
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Preference number: 1 (lower is better) Translates to: NEIQHLIRCTEHCVL*LIPSSQASKIRELE Trigger: CTCTAATTCTCGTATCTTAGAGGCCTGCGAGGAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATTTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR TCA 90 bp | GAAATACACAGAAGGCTGATAAGTGGTGTAACAATGCTGTTGAAATaGAATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: EIHRRLISGVTMLLK*NTTFDKMHRTLCPL Trigger: CAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATTTCATTTCAACAGCATTGTTACACCACTTATCAGCCTTCTGTGTATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCTGCTTCCCAACCTGCTaGGTGCGGGGATGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: WQICKSRCVPASEAFVFTCFPTC*VRGWAG Trigger: GCCTGCCCATCCCCGCACGCAGCAGGTTGGGAAGCA...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCGTGTGGCAAGGACTGTaGCTTTGTGGTGGCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: WQICKSRCVPASEAFVFTVWQGL*LCGGLA Trigger: TGCAAGGCCACCACAAAGTCACAGTCCTTGCCACAC...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR GCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCTGCTTCCCAACCTGCTaGGTGCGGGGATGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFCFPTC*VRGWAG Trigger: GCCTGCCCATCCCCGCACGCAGCAGGTTGGGAAGCA...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR CAA 90 bp | CACATCTATCTTGGGAAGAAAAGAAGGAAGCCAAAGGAAATACGGTaGACAGCTGTGTTTCAATCAGGTTGCTTCCCAACCTGCTGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: HIYLGKKRRKPKEIR*TAVFQSGCFPTCCV Trigger: CACGCAGCAGGTTGGGAAGCAACCTGATTGAAACACAGCTGTCAACCGTATTTCCTTTGGCTTCCTTCTTTTCTTCCCAAGATAGATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAAAACCACATCTATCTTaGGAAGAAAAGAAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: CDFVVALHLRPNNTLKAKKPHLS*EEKKEA Trigger: GGCTTCCTTCTTTTCTTCCCAAGATAGATGTGGTTT...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTAGGCCAAATAATACGCTaGAAGCAAAATGAGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: IGKYARADVFQQVKLSSLGQIIR*KQNESS Trigger: ACTGCTCTCATTTTGCTTTCAGCGTATTATTTGGCC...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCAAACCACATCTATCTTaGGAAGAAAAGAAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFKPHLS*EEKKEA Trigger: GGCTTCCTTCTTTTCTTCCCAAGATAGATGTGGTTT...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR TCA 72 bp | TTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTaGAGCTTTCGTCTTTACCATGTGTGGCAAGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LANMQEQMCSSK*SFRLYHVWQGL Trigger: CAGTCCTTGCCACACATGGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR TCA 72 bp | CAACATTTGATAAGATGCACAGAACATTGTGTCCTCTaGCTGATACCTTCCTCGCAGGCCTCTAAGATACGA | + |
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Preference number: 3 (lower is better) Translates to: QHLIRCTEHCVL*LIPSSQASKIR Trigger: TCGTATCTTAGAGGCCTGCGAGGAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCTGTGTTTCAATCAGGTaGCTTCCCAACCTGCTGCGT | + |
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Preference number: 3 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFCVSIR*LPNLLR Trigger: ACGCAGCAGGTTGGGAAGCAACCTGATTGAAACACA...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATGTGTTTCAATCAGGTaGCTTCCCAACCTGCTGCGT | + |
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Preference number: 3 (lower is better) Translates to: LEYHQVHPIILSDITQLVCVSIR*LPNLLR Trigger: ACGCAGCAGGTTGGGAAGCAACCTGATTGAAACACA...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CAA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACAAACCACATCTATCTaGGGAAGAAAAGAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IGKYARADVFQQVKLSSLQTTSI*GRKEGS Trigger: GCTTCCTTCTTTTCTTCCCAAGATAGATGTGGTTTG...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCTGTGTAAACAAAGCATaGCTTTTTCACAGCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: WQICKSRCVPASEAFVFTCVNKA*LFHSIQ Trigger: CTGTATGCTGTGAAAAAGCAATGCTTTGTTTACACA...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCGAGCTAGGGAACACATaGGCAAATATGCAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFELGNT*ANMQEQ Trigger: CTGCTCTTGCATATTTGCCAATGTGTTCCCTAGCTC...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCCAAACCACATCTATCTaGGGAAGAAAAGAAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFQTTSI*GRKEGS Trigger: GCTTCCTTCTTTTCTTCCCAAGATAGATGTGGTTTG...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR CAA 72 bp | AAAGGAAATACGGTTGACAGCTGTGTTTCAATCAGGTaGCTTCCCAACCTGCTGCGTGCGGGGATGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KGNTVDSCVSIR*LPNLLRAGMGR Trigger: CCTGCCCATCCCCGCACGCAGCAGGTTGGGAAGCAACCTGATTGAAACACAGCTGTCAACCGTATTTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAACGGACCTCCAAGCACTaGGTGACATCCTGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CDFVVALHLRPNNTLKAKRTSKH*VTSCGS Trigger: TGAGCCACAGGATGTCACTCAGTGCTTGGAGGTCCG...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAACCTCCAAGCACTGAGTaGCATCCTGTGGCTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CDFVVALHLRPNNTLKAKPPSTE*HPVAQE Trigger: TTCCTGAGCCACAGGATGTCACTCAGTGCTTGGAGG...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCCGGACCTCCAAGCACTaGGTGACATCCTGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTRTSKH*VTSCGS Trigger: TGAGCCACAGGATGTCACTCAGTGCTTGGAGGTCCG...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCGTGGGGTCGGGAGTCTaGAATCACAGCCACACACCT | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTVGSGV*NHSHTP Trigger: AGGTGTGTGGCTGTGATTGCAGACTCCCGACCCCAC...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAACTGAGTGACATCCTGTaGCTCAGGAAGACGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CDFVVALHLRPNNTLKAKLSDIL*LRKTLH Trigger: GTGCAGCGTCTTCCTGAGCCACAGGATGTCACTCAG...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCGGTACCTGTGCCATGTaGGAAAAGCGGGTCCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTGTCAM*EKRVLR Trigger: ACGAAGGACCCGCTTTTCTCACATGGCACAGGTACC...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTAAGGTGGGCCAGGTTGTaGAGGCTTCGAACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IGKYARADVFQQVKLSSLRWARL*RLRTAG Trigger: CCCTGCTGTTCGAAGCCTTCACAACCTGGCCCACCT...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCTCCTGCAGCATCTCCTaGATGTCTCTCTCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTSCSIS*MSLSSC Trigger: GCAGCTGGAGAGAGACATGCAGGAGATGCTGCAGGA...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| 3UTR CAA 72 bp | ACCATGTGTGGCAAGGACTGTGACTTTGTGGTGGCCTaGCACCTGAGGCCAAATAATACGCTGAAAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: TMCGKDCDFVVA*HLRPNNTLKAK Trigger: TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACAGTCCTTGCCACACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACAGCTGGGTTTCTCCTaGTTGGTCCACCCTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: IGKYARADVFQQVKLSSLQLGFS*LVHPQC Trigger: GCACTGAGGGTGGACCAATCAGGAGAAACCCAGCTG...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCTCACAGCCACACACCTaGCTCTTCCTGATGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTSQPHT*LFLMMS Trigger: GCTCATCATCAGGAAGAGGCAGGTGTGTGGCTGTGA...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCTCCAGCTGCAGCAGATaGTACCTGTGCCATGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTSSCSR*YLCHVR Trigger: TCTCACATGGCACAGGTACCATCTGCTGCAGCTGGA...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCCAGACCACTCTCCATTaGGAAAAGACAGAGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTQTTLH*EKTELG Trigger: CCCCAACTCTGTCTTTTCTCAATGGAGAGTGGTCTG...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCAGCTGGGTTTCTCCTaGTTGGTCCACCCTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKQLGFS*LVHPQC Trigger: GCACTGAGGGTGGACCAATCAGGAGAAACCCAGCTG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCAGGTGGGCCAGGTTGTaGAGGCTTCGAACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFRWARL*RLRTAG Trigger: CCCTGCTGTTCGAAGCCTTCACAACCTGGCCCACCT...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCGTTGATAGTGATCAGTaGGGAGAGGCTGGTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTVDSDQ*GEAGWL Trigger: AAGCCAACCAGCCTCTCCTCACTGATCACTATCAAC...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCAATTTTCTGGTTGCATaGAGCTCCTCTCCACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTNFLVA*SSSPPR Trigger: CCTGGGTGGAGAGGAGCTGCATGCAACCAGAAAATT...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCGAGAAAGAAGGCTCCTaGAGCATCTCCTGCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTEKEGS*SISCMS Trigger: AGACATGCAGGAGATGCTGCAGGAGCCTTCTTTCTC...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCGGAAGGGAGCAGGTCTaGGCAACACACCCCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFGREQV*ATHPTS Trigger: AGACGTGGGGTGTGTTGCCCAGACCTGCTCCCTTCC...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAGGAAGGGAGCAGGTCTaGGCAACACACCCCACGTCT | + |
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Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVGREQV*ATHPTS Trigger: AGACGTGGGGTGTGTTGCCCAGACCTGCTCCCTTCC...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCCCCTACATTTCCAGCTaGGTTTCTCCTGATTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTPYISS*VSPDWS Trigger: GGACCAATCAGGAGAAACCCAGCTGGAAATGTAGGG...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAAACTGGAGGCCAGAATaGCACCATGTTGTATTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CDFVVALHLRPNNTLKAKNWRPE*HHVVLP Trigger: AGGCAATACAACATGGTGCCATTCTGGCCTCCAGTT...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR TCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGGGTACCTGTGCCATGTaGGAAAAGCGGGTCCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKGTCAM*EKRVLR Trigger: ACGAAGGACCCGCTTTTCTCACATGGCACAGGTACC...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTATCACAGCCACACACCTaGCTCTTCCTGATGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: IGKYARADVFQQVKLSSLSQPHT*LFLMMS Trigger: GCTCATCATCAGGAAGAGGCAGGTGTGTGGCTGTGA...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTAATGTCTCTCTCCAGCTaGAGCAGATGGTACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IGKYARADVFQQVKLSSLMSLSS*SRWYLC Trigger: GCACAGGTACCATCTGCTGCAGCTGGAGAGAGACAT...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCTGAGTGACATCCTGTaGCTCAGGAAGACGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKLSDIL*LRKTLH Trigger: GTGCAGCGTCTTCCTGAGCCACAGGATGTCACTCAG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCTTCTGTGTTGGTAACTaGAGGCCAGAATGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTFCVGN*RPEWHH Trigger: ATGGTGCCATTCTGGCCTCCAGTTACCAACACAGAA...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| 3UTR CAA 72 bp | CAGTTTCATGTCCAGAGAACTGAGCTAGGGAACACATaGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFHVQRTELGNT*ANMQEQMCSSK Trigger: CTTGCTGGAACACATCTGCTCTTGCATATTTGCCAATGTGTTCCCTAGCTCAGTTCTCTGGACATGAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCCCCACAGTTGTGTCCTaGGAAATTATCATTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WQICKSRCVPASEAFVFTPTVVS*EIIIAL Trigger: CAGTGCAATGATAATTTCTCAGGACACAACTGTGGG...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCCCTCCAAGCACTGAGTaGCATCCTGTGGCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFPPSTE*HPVAQE Trigger: TTCCTGAGCCACAGGATGTCACTCAGTGCTTGGAGG...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACAAAGACCGCATCAGTaGAAGTGTGCAGGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: IGKYARADVFQQVKLSSLQRPHQ*KCAGGQ Trigger: TTGTCCTCCTGCACACTTTCACTGATGCGGTCTTTG...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCATCCTGCAGCATCTCCTaGATGTCTCTCTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPSCSIS*MSLSSC Trigger: GCAGCTGGAGAGAGACATGCAGGAGATGCTGCAGGA...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAGCATCAGTGAAAGTGTaGAGGAGGACAAAAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDFVVALHLRPNNTLKAKASVKV*RRTKIG Trigger: TCCTATTTTTGTCCTCCTGCACACTTTCACTGATGC...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAGGCACCATGTTGTATTaGCTGTTATGTCCAATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CDFVVALHLRPNNTLKAKGTMLY*LLCPIG Trigger: ACCTATTGGACATAACAGGCAATACAACATGGTGCC...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGTCCAGCTGCAGCAGATaGTACCTGTGCCATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKSSCSR*YLCHVR Trigger: TCTCACATGGCACAGGTACCATCTGCTGCAGCTGGA...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTATCAGTGAGGAGAGGCTaGTTGGCTTCATTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IGKYARADVFQQVKLSSLSVRRG*LASFLV Trigger: CACCAAGAATGAAGCCAACCAGCCTCTCCTCACTGA...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCATATCCAAGGCCCTaGCAAAGTGGCTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGKYARADVFQQVKLSSLPYPRP*QSGSFL Trigger: AAGAAAAGAGCCACTTTGTCAGGGCCTTGGATATGG...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCAGACCACTCTCCATTaGGAAAAGACAGAGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKQTTLH*EKTELG Trigger: CCCCAACTCTGTCTTTTCTCAATGGAGAGTGGTCTG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCAAAGACCGCATCAGTaGAAGTGTGCAGGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKQRPHQ*KCAGGQ Trigger: TTGTCCTCCTGCACACTTTCACTGATGCGGTCTTTG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGAATTTTCTGGTTGCATaGAGCTCCTCTCCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKNFLVA*SSSPPR Trigger: CCTGGGTGGAGAGGAGCTGCATGCAACCAGAAAATT...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR GCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGATTGAGGGTGAGTTGTaGGCTTCGCCATATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKIEGEL*ASPYPR Trigger: CCTTGGATATGGCGAAGCGCACAACTCACCCTCAAT...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGAGCAGATGGTACCTGTaGCATGTGAGAAAAGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKSRWYL*HVRKAG Trigger: ACCCGCTTTTCTCACATGGCACAGGTACCATCTGCT...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAATGTCTCTCTCCAGCTaGAGCAGATGGTACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVMSLSS*SRWYLC Trigger: GCACAGGTACCATCTGCTGCAGCTGGAGAGAGACAT...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGGAGAAAGAAGGCTCCTaGAGCATCTCCTGCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKEKEGS*SISCMS Trigger: AGACATGCAGGAGATGCTGCAGGAGCCTTCTTTCTC...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAAAGACGCTGCACTGCTaGTCTCCCTACATTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPKTLHC*SPYISS Trigger: GCTGGAAATGTAGGGAGACCAGCAGTGCAGCGTCTT...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCCATATCCAAGGCCCTaGCAAAGTGGCTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKPYPRP*QSGSFL Trigger: AAGAAAAGAGCCACTTTGTCAGGGCCTTGGATATGG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCGTTGATAGTGATCAGTaGGGAGAGGCTGGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFVDSDQ*GEAGWL Trigger: AAGCCAACCAGCCTCTCCTCACTGATCACTATCAAC...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCATTGAGGGTGAGTTGTaGGCTTCGCCATATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFIEGEL*ASPYPR Trigger: CCTTGGATATGGCGAAGCGCACAACTCACCCTCAAT...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAAGCAGATGGTACCTGTaGCATGTGAGAAAAGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVSRWYL*HVRKAG Trigger: ACCCGCTTTTCTCACATGGCACAGGTACCATCTGCT...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAATTGGCACACTCTCGTaGAAACTGAGCCCAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPIGTLS*KLSPNL Trigger: CAGGTTTGGGCTCAGTTTCCACGAGAGTGTGCCAAT...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCACCCTACATTTCCAGCTaGGTTTCTCCTGATTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPPYISS*VSPDWS Trigger: GGACCAATCAGGAGAAACCCAGCTGGAAATGTAGGG...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAATATCCCAGATTGTCTaGAGCAGTAACAAACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CDFVVALHLRPNNTLKAKISQIV*SSNKHF Trigger: GAAATGTTTGTTACTGCTCCAGACAATCTGGGATAT...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATCAGTGAGGAGAGGCTaGTTGGCTTCATTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVSVRRG*LASFLV Trigger: CACCAAGAATGAAGCCAACCAGCCTCTCCTCACTGA...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCACCTCCTTGTGGCAATaGCAAATTGAGGGTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFTSLWQ*QIEGEL Trigger: CAACTCACCCTCAATTTGTCATTGCCACAAGGAGGT...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCAAATTGTGGTGTGTTaGCATCTGGTCCCAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKQIVVC*HLVPVC Trigger: ACATACTGGGACCAGATGGCAACACACCACAATTTG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGACTGTGAGAATTTTCTaGTTGCATGCAGCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKTVRIF*LHAAPL Trigger: GAGAGGAGCTGCATGCAACCAGAAAATTCTCACAGT...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAGGTCATATTTTCCCGTaGGAGCACTGTAACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPGHIFP*EHCNLP Trigger: TGGAAGGTTACAGTGCTCCCACGGGAAAATATGACC...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCGGTCATATTTTCCCGTaGGAGCACTGTAACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFGHIFP*EHCNLP Trigger: TGGAAGGTTACAGTGCTCCCACGGGAAAATATGACC...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCAACTGGAGGCCAGAATaGCACCATGTTGTATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFNWRPE*HHVVLP Trigger: AGGCAATACAACATGGTGCCATTCTGGCCTCCAGTT...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCTTCTGTGTTGGTAACTaGAGGCCAGAATGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFFCVGN*RPEWHH Trigger: ATGGTGCCATTCTGGCCTCCAGTTACCAACACAGAA...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCACCCACAGTTGTGTCCTaGGAAATTATCATTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPPTVVS*EIIIAL Trigger: CAGTGCAATGATAATTTCTCAGGACACAACTGTGGG...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTACAAATTGTGGTGTGTTaGCATCTGGTCCCAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVQIVVC*HLVPVC Trigger: ACATACTGGGACCAGATGGCAACACACCACAATTTG...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTACCATCAAGTCATCAGTaGAGACATCGCAGACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVPSSHQ*RHRRRF Trigger: AAAACGTCTGCGATGTCTGCACTGATGACTTGATGG...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCCCATCAAGTCATCAGTaGAGACATCGCAGACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFPSSHQ*RHRRRF Trigger: AAAACGTCTGCGATGTCTGCACTGATGACTTGATGG...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCACTGTGAGAATTTTCTaGTTGCATGCAGCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFTVRIF*LHAAPL Trigger: GAGAGGAGCTGCATGCAACCAGAAAATTCTCACAGT...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAAAGGCCCTGACAAAGTaGCTCTTTTCTTCTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPKALTK*LFSSGL Trigger: AAGTCCAGAAGAAAAGAGCCACTTTGTCAGGGCCTT...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAAAGGCCCTGACAAAGTaGCTCTTTTCTTCTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVKALTK*LFSSGL Trigger: AAGTCCAGAAGAAAAGAGCCACTTTGTCAGGGCCTT...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAGCATCAGTGAAAGTGTaGAGGAGGACAAAAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPASVKV*RRTKIG Trigger: TCCTATTTTTGTCCTCCTGCACACTTTCACTGATGC...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAGGCACCATGTTGTATTaGCTGTTATGTCCAATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVGTMLY*LLCPIG Trigger: ACCTATTGGACATAACAGGCAATACAACATGGTGCC...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAGACGTTTTTCCCAGTTaGAAAATTCCAGTAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPDVFPS*KIPVRK Trigger: CTTCCTTACTGGAATTTTGCAACTGGGAAAAACGTC...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAGACGTTTTTCCCAGTTaGAAAATTCCAGTAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEYHQVHPIILSDITQLVDVFPS*KIPVRK Trigger: CTTCCTTACTGGAATTTTGCAACTGGGAAAAACGTC...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAATATCCCAGATTGTCTaGAGCAGTAACAAACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKFIQLSSQISHNWYNLPISQIV*SSNKHF Trigger: GAAATGTTTGTTACTGCTCCAGACAATCTGGGATAT...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS GCA 90 bp | AATGGCGGCTGTGGGGTCGGGAGTCTGCAATCACAGCCACACACCTaGCTCTTCCTGATGATGAGCCACAAGGGTCAGTCCCCGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NGGCGVGSLQSQPHT*LFLMMSHKGQSPVQ Trigger: CTGGACCGGGGACTGACCCTTGTGGCTCATCATCAGGAAGAGGCAGGTGTGTGGCTGTGATTGCAGACTCCCGACCCCACAGCCGCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
||
| CDS TCA 90 bp | TGGGTTTGTCCTCCCGTTCCATTCAGGAAGAGGTGGGCCAGGTTGTaGAGGCTTCGAACAGCAGGGTCATATTTTCCCGTGGGAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WVCPPVPFRKRWARL*RLRTAGSYFPVGAL Trigger: CAGTGCTCCCACGGGAAAATATGACCCTGCTGTTCGAAGCCTTCACAACCTGGCCCACCTCTTCCTGAATGGAACGGGAGGACAAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS GCA 90 bp | GAGAAAGAAGGCTCCTGCAGCATCTCCTGCATGTCTCTCTCCAGCTaGAGCAGATGGTACCTGTGCCATGTGAGAAAAGCGGGTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EKEGSCSISCMSLSS*SRWYLCHVRKAGPS Trigger: CGAAGGACCCGCTTTTCTCACATGGCACAGGTACCATCTGCTGCAGCTGGAGAGAGACATGCAGGAGATGCTGCAGGAGCCTTCTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS GCA 90 bp | CTCCAAGCACTGAGTGACATCCTGTGGCTCAGGAAGACGCTGCACTaGTGGTCTCCCTACATTTCCAGCTGGGTTTCTCCTGATTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQALSDILWLRKTLH*WSPYISSWVSPDWS Trigger: GGACCAATCAGGAGAAACCCAGCTGGAAATGTAGGGAGACCAGCAGTGCAGCGTCTTCCTGAGCCACAGGATGTCACTCAGTGCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS TCA 90 bp | CCTGCATGTCTCTCTCCAGCTGCAGCAGATGGTACCTGTGCCATGTaGGAAAAGCGGGTCCTTCGTGAGAGAAATCCACATCCCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PACLSPAAADGTCAM*EKRVLRERNPHPQS Trigger: GCTTTGGGGATGTGGATTTCTCTCACGAAGGACCCGCTTTTCTCACATGGCACAGGTACCATCTGCTGCAGCTGGAGAGAGACATGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS CCA 90 bp | GGAGCAGGTCTGGGCAACACACCCCACGTCTCAGAGCCTCAATATTaGCACACTCTCGTGGAAACTGAGCCCAAACCTGATAAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGLGNTPHVSEPQY*HTLVETEPKPDKTA Trigger: TGCTGTTTTATCAGGTTTGGGCTCAGTTTCCACGAGAGTGTGCCAATATTGAGGCTCTGAGACGTGGGGTGTGTTGCCCAGACCTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
||
| CDS TCA 90 bp | TCGGGAGCTCCTCATAGTCCTCAGCATAGCGTTGATAGTGATCAGTaGGGAGAGGCTGGTTGGCTTCATTCTTGGTGCTTCTGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SGAPHSPQHSVDSDQ*GEAGWLHSWCFWPL Trigger: CAATGGCCAGAAGCACCAAGAATGAAGCCAACCAGCCTCTCCTCACTGATCACTATCAACGCTATGCTGAGGACTATGAGGAGCTCCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133932.2 |
||
| CDS CCA 90 bp | GTGAAAGTGTGCAGGAGGACAAAAATAGGATCATTGGGAGACAAATaGGTTTGTCCTCCCGTTCCATTCAGGAAGAGGTGGGCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VKVCRRTKIGSLGDK*VCPPVPFRKRWARL Trigger: CAACCTGGCCCACCTCTTCCTGAATGGAACGGGAGGACAAACCCATTTGTCTCCCAATGATCCTATTTTTGTCCTCCTGCACACTTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
||
| CDS TCA 90 bp | GGACGGCAAGTCCCACAGTTGTGTCCTGAGAAATTATCATTGCACTaGCATGTTCTATTAAAGAACCTCAGAGGCCAGGCTTCTCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRQVPQLCPEKLSLH*HVLLKNLRGQASRS Trigger: TGACCGAGAAGCCTGGCCTCTGAGGTTCTTTAATAGAACATGTCAGTGCAATGATAATTTCTCAGGACACAACTGTGGGACTTGCCGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
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| CDS TCA 90 bp | TGCAGCTCCTCTCCACCCAGGACGGCAAGTCCCACAGTTGTGTCCTaGGAAATTATCATTGCACTGACATGTTCTATTAAAGAACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSSPPRTASPTVVS*EIIIALTCSIKEPQ Trigger: CTGAGGTTCTTTAATAGAACATGTCAGTGCAATGATAATTTCTCAGGACACAACTGTGGGACTTGCCGTCCTGGGTGGAGAGGAGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAACAGACCACTCTCCATaGAGAAAAGACAGAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CDFVVALHLRPNNTLKAKTDHSP*RKDRVG Trigger: CCCAACTCTGTCTTTTCTCAATGGAGAGTGGTCTGT...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS TCA 90 bp | CCCAGGGTATCGTACTCTTCCAAGGATTCACAGACCACTCTCCATTaGGAAAAGACAGAGTTGGGGCTTATAAGAGTAGAATCGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRVSYSSKDSQTTLH*EKTELGLIRVESKL Trigger: CAACTTCGATTCTACTCTTATAAGCCCCAACTCTGTCTTTTCTCAATGGAGAGTGGTCTGTGAATCCTTGGAAGAGTACGATACCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CCA 90 bp | CTCCTGACCTGGCCATTGAACTTCATAAGCATATCCCAGATTGTCTaGAGCAGTAACAAACATTTCTGTGTTGGTAACTGGAGGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLTWPLNFISISQIV*SSNKHFCVGNWRPE Trigger: TTCTGGCCTCCAGTTACCAACACAGAAATGTTTGTTACTGCTCCAGACAATCTGGGATATGCTTATGAAGTTCAATGGCCAGGTCAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CCA 90 bp | TCCCAGATTGTCTGGAGCAGTAACAAACATTTCTGTGTTGGTAACTaGAGGCCAGAATGGCACCATGTTGTATTGCCTGTTATGTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQIVWSSNKHFCVGN*RPEWHHVVLPVMSN Trigger: ATTGGACATAACAGGCAATACAACATGGTGCCATTCTGGCCTCCAGTTACCAACACAGAAATGTTTGTTACTGCTCCAGACAATCTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS CCA 90 bp | TGGTGCTTCTGGCCATTGAACTTCATAAGCATATCCCAGATTGTCTaGAGCAGTAACAAACATTTCTGTGTTGGTAACTGGAGGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WCFWPLNFISISQIV*SSNKHFCVGNWRPE Trigger: TTCTGGCCTCCAGTTACCAACACAGAAATGTTTGTTACTGCTCCAGACAATCTGGGATATGCTTATGAAGTTCAATGGCCAGAAGCACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133932.2 |
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| CDS-3UTR CAA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACTCAGAGCCTCAATATaGGCACACTCTCGTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IGKYARADVFQQVKLSSLLRASI*AHSRGN Trigger: GTTTCCACGAGAGTGTGCCAATATTGAGGCTCTGAG...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGGGGAGACAAATGGGTTaGTCCTCCCGTTCCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKGRQMG*SSRSIQ Trigger: CTGAATGGAACGGGAGGACAAACCCATTTGTCTCCC...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS GCA 90 bp | TTATACCTCCTTAGCCATTCGTCAAAGACCGCATCAGTGAAAGTGTaGAGGAGGACAAAAATAGGATCATTGGGAGACAAATGGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LYLLSHSSKTASVKV*RRTKIGSLGDKWVC Trigger: ACAAACCCATTTGTCTCCCAATGATCCTATTTTTGTCCTCCTGCACACTTTCACTGATGCGGTCTTTGACGAATGGCTAAGGAGGTATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS-3UTR CAA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCTCAGAGCCTCAATATaGGCACACTCTCGTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKLRASI*AHSRGN Trigger: GTTTCCACGAGAGTGTGCCAATATTGAGGCTCTGAG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAAGACGTTTTTCCCAGTaGCAAAATTCCAGTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CDFVVALHLRPNNTLKAKRRFSQ*QNSSKE Trigger: TTCCTTACTGGAATTTTGCAACTGGGAAAAACGTCT...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCGGGAGACAAATGGGTTaGTCCTCCCGTTCCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFGRQMG*SSRSIQ Trigger: CTGAATGGAACGGGAGGACAAACCCATTTGTCTCCC...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCACAAACATTTCTGTGTaGGTAACTGGAGGCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WQICKSRCVPASEAFVFTTNISV*VTGGQN Trigger: ATTCTGGCCTCCAGTTACCAACACAGAAATGTTTGT...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCGTGAGGAGAGGCTGGTaGGCTTCATTCTTGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFVRRGW*ASFLVL Trigger: AAGCACCAAGAATGAAGCCAACCAGCCTCTCCTCAC...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CCA 90 bp | CACTACAGCAATGGTAATGATTTCAGATACAGTAAACTCCTGACCTaGCCATTGAACTTCATAAGCATATCCCAGATTGTCTGGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HYSNGNDFRYSKLLT*PLNFISISQIVWSS Trigger: ACTGCTCCAGACAATCTGGGATATGCTTATGAAGTTCAATGGCCAGGTCAGGAGTTTACTGTATCTGAAATCATTACCATTGCTGTAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGCGGCAAGTCCCACAGTaGTGTCCTGAGAAATTATCA | + |
|
Preference number: 5 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKRQVPQ*CPEKLS Trigger: TGATAATTTCTCAGGACACAACTGTGGGACTTGCCG...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGACAGACCACTCTCCATaGAGAAAAGACAGAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKTDHSP*RKDRVG Trigger: CCCAACTCTGTCTTTTCTCAATGGAGAGTGGTCTGT...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | TGTGACTTTGTGGTGGCCTTGCACCTGAGGCCAAATAATACGCTGAAAGCAAAAACAAAAATAGGATCATaGGGAGACAAATGGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CDFVVALHLRPNNTLKAKTKIGS*GDKWVC Trigger: ACAAACCCATTTGTCTCCCAATGATCCTATTTTTGT...TTTTGCTTTCAGCGTATTATTTGGCCTCAGGTGCAAGGCCACCACAAAGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACAGAATGGCACCATGTaGTATTGCCTGTTATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IGKYARADVFQQVKLSSLQNGTM*YCLLCP Trigger: TGGACATAACAGGCAATACAACATGGTGCCATTCTG...TAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCAGTCCTCAGCATAGCGTaGATAGTGATCAGTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TKFIQLSSQISHNWYNLPVLSIA*IVISEE Trigger: CTCCTCACTGATCACTATCAACGCTATGCTGAGGAC...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTACGGCAAGTCCCACAGTaGTGTCCTGAGAAATTATCA | + |
|
Preference number: 5 (lower is better) Translates to: LEYHQVHPIILSDITQLVRQVPQ*CPEKLS Trigger: TGATAATTTCTCAGGACACAACTGTGGGACTTGCCG...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCATGTGGCAATGACAAATaGAGGGTGAGTTGTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TKFIQLSSQISHNWYNLPCGNDK*RVSCAL Trigger: AAGCGCACAACTCACCCTCAATTTGTCATTGCCACA...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCATCAAATTGTGGTGTGTaGCCATCTGGTCCCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: TKFIQLSSQISHNWYNLPSNCGV*PSGPSM Trigger: CATACTGGGACCAGATGGCAACACACCACAATTTGA...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCTCAAATTGTGGTGTGTaGCCATCTGGTCCCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFSNCGV*PSGPSM Trigger: CATACTGGGACCAGATGGCAACACACCACAATTTGA...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGAGAGTAGAATCGAAGTaGCTTCTGGATCCCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKRVESK*LLDPIK Trigger: CTTGATGGGATCCAGAAGCAACTTCGATTCTACTCT...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAAATATGCAAGAGCAGATGTGTTCCAGCAAGTGAAGCTTTCGTCTTTACCACAAAAATAGGATCATaGGGAGACAAATGGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WQICKSRCVPASEAFVFTTKIGS*GDKWVC Trigger: ACAAACCCATTTGTCTCCCAATGATCCTATTTTTGT...GGTAAAGACGAAAGCTTCACTTGCTGGAACACATCTGCTCTTGCATATTTGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ATCACTGGAGAGCAATGCTTTAATTCCAAACCACATCTATCTTGGGAAGAAAAGTGGCACCATGTTGTATaGCCTGTTATGTCCAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: ITGEQCFNSKPHLSWEEKWHHVV*PVMSNR Trigger: CCTATTGGACATAACAGGCAATACAACATGGTGCCA...CTTTTCTTCCCAAGATAGATGTGGTTTGGAATTAAAGCATTGCTCTCCAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCAGAGTAGAATCGAAGTaGCTTCTGGATCCCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFRVESK*LLDPIK Trigger: CTTGATGGGATCCAGAAGCAACTTCGATTCTACTCT...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | AATACAACATTTGATAAGATGCACAGAACATTGTGTCCTCTGACTGATACCTTCTGGCACCATGTTGTATaGCCTGTTATGTCCAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTTFDKMHRTLCPLTDTFWHHVV*PVMSNR Trigger: CCTATTGGACATAACAGGCAATACAACATGGTGCCA...GAAGGTATCAGTCAGAGGACACAATGTTCTGTGCATCTTATCAAATGTTGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTATAATTTGCCACAGAATGGCACCATGTaGTATTGCCTGTTATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKFIQLSSQISHNWYNLPQNGTM*YCLLCP Trigger: TGGACATAACAGGCAATACAACATGGTGCCATTCTG...TGGCAAATTATACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAACAAACATTTCTGTGTaGGTAACTGGAGGCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LEYHQVHPIILSDITQLVTNISV*VTGGQN Trigger: ATTCTGGCCTCCAGTTACCAACACAGAAATGTTTGT...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS-3UTR CAA 90 bp | TTAGAATACCACCAAGTTCATCCAATTATCCTCTCAGATATCACACAACTGGTAAGACGTTTTTCCCAGTaGCAAAATTCCAGTAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LEYHQVHPIILSDITQLVRRFSQ*QNSSKE Trigger: TTCCTTACTGGAATTTTGCAACTGGGAAAAACGTCT...TACCAGTTGTGTGATATCTGAGAGGATAATTGGATGAACTTGGTGGTATTCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS GCA 72 bp | TGTGGGGTCGGGAGTCTGCAATCACAGCCACACACCTaGCTCTTCCTGATGATGAGCCACAAGGGTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: CGVGSLQSQPHT*LFLMMSHKGQS Trigger: GGACTGACCCTTGTGGCTCATCATCAGGAAGAGGCAGGTGTGTGGCTGTGATTGCAGACTCCCGACCCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
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| CDS TCA 72 bp | CCTCCCGTTCCATTCAGGAAGAGGTGGGCCAGGTTGTaGAGGCTTCGAACAGCAGGGTCATATTTTCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: PPVPFRKRWARL*RLRTAGSYFPV Trigger: CACGGGAAAATATGACCCTGCTGTTCGAAGCCTTCACAACCTGGCCCACCTCTTCCTGAATGGAACGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS GCA 72 bp | CTGAGTGACATCCTGTGGCTCAGGAAGACGCTGCACTaGTGGTCTCCCTACATTTCCAGCTGGGTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSDILWLRKTLH*WSPYISSWVSP Trigger: AGGAGAAACCCAGCTGGAAATGTAGGGAGACCAGCAGTGCAGCGTCTTCCTGAGCCACAGGATGTCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CAA 90 bp | AAGGAAGCCAAAGGAAATACGGTTGACAGCTGTGTTTCAATCAGGTaGCTTCCCAACCTGCTGCGTGCGGGGATGGGCAGGCGGCTATCA | + |
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Preference number: 6 (lower is better) Translates to: KEAKGNTVDSCVSIR*LPNLLRAGMGRRLS Trigger: TGATAGCCGCCTGCCCATCCCCGCACGCAGCAGGTTGGGAAGCAACCTGATTGAAACACAGCTGTCAACCGTATTTCCTTTGGCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133932.2 |
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| CDS CCA 72 bp | CTGGGCAACACACCCCACGTCTCAGAGCCTCAATATTaGCACACTCTCGTGGAAACTGAGCCCAAACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LGNTPHVSEPQY*HTLVETEPKPD Trigger: ATCAGGTTTGGGCTCAGTTTCCACGAGAGTGTGCCAATATTGAGGCTCTGAGACGTGGGGTGTGTTGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
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| CDS TCA 72 bp | CTCTCTCCAGCTGCAGCAGATGGTACCTGTGCCATGTaGGAAAAGCGGGTCCTTCGTGAGAGAAATCCACAT | + |
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Preference number: 6 (lower is better) Translates to: LSPAAADGTCAM*EKRVLRERNPH Trigger: ATGTGGATTTCTCTCACGAAGGACCCGCTTTTCTCACATGGCACAGGTACCATCTGCTGCAGCTGGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS TCA 72 bp | AAAGGAGGTGTGTCAAATACACGGACCTCCAAGCACTaGGTGACATCCTGTGGCTCAGGAAGACGCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: KGGVSNTRTSKH*VTSCGSGRRCT Trigger: AGTGCAGCGTCTTCCTGAGCCACAGGATGTCACTCAGTGCTTGGAGGTCCGTGTATTTGACACACCTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CAA 72 bp | AGGATTCGGGAGCTCCTCATAGTCCTCAGCATAGCGTaGATAGTGATCAGTGAGGAGAGGCTGGTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RIRELLIVLSIA*IVISEERLVGF Trigger: GAAGCCAACCAGCCTCTCCTCACTGATCACTATCAACGCTATGCTGAGGACTATGAGGAGCTCCCGAATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS CAA 90 bp | GGAGTGGTTAGGATTCGGGAGCTCCTCATAGTCCTCAGCATAGCGTaGATAGTGATCAGTGAGGAGAGGCTGGTTGGCTTCATTCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GVVRIRELLIVLSIA*IVISEERLVGFILG Trigger: ACCAAGAATGAAGCCAACCAGCCTCTCCTCACTGATCACTATCAACGCTATGCTGAGGACTATGAGGAGCTCCCGAATCCTAACCACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS CAA 90 bp | AGTGTGCAGGAGGACAAAAATAGGATCATTGGGAGACAAATGGGTTaGTCCTCCCGTTCCATTCAGGAAGAGGTGGGCCAGGTTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SVQEDKNRIIGRQMG*SSRSIQEEVGQVVK Trigger: CTTCACAACCTGGCCCACCTCTTCCTGAATGGAACGGGAGGACAAACCCATTTGTCTCCCAATGATCCTATTTTTGTCCTCCTGCACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS TCA 72 bp | CCTCATAGTCCTCAGCATAGCGTTGATAGTGATCAGTaGGGAGAGGCTGGTTGGCTTCATTCTTGGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PHSPQHSVDSDQ*GEAGWLHSWCF Trigger: GAAGCACCAAGAATGAAGCCAACCAGCCTCTCCTCACTGATCACTATCAACGCTATGCTGAGGACTATGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS CAA 72 bp | GAGGACAAAAATAGGATCATTGGGAGACAAATGGGTTaGTCCTCCCGTTCCATTCAGGAAGAGGTGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: EDKNRIIGRQMG*SSRSIQEEVGQ Trigger: CTGGCCCACCTCTTCCTGAATGGAACGGGAGGACAAACCCATTTGTCTCCCAATGATCCTATTTTTGTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS TCA 72 bp | CTGGTCCCAGTATGTCTTCTAACCTCCTTGTGGCAATaGCAAATTGAGGGTGAGTTGTGCGCTTCGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: LVPVCLLTSLWQ*QIEGELCASPY Trigger: ATATGGCGAAGCGCACAACTCACCCTCAATTTGTCATTGCCACAAGGAGGTTAGAAGACATACTGGGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
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| CDS CCA 72 bp | TGCAGGAGGACAAAAATAGGATCATTGGGAGACAAATaGGTTTGTCCTCCCGTTCCATTCAGGAAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CRRTKIGSLGDK*VCPPVPFRKRW Trigger: CCACCTCTTCCTGAATGGAACGGGAGGACAAACCCATTTGTCTCCCAATGATCCTATTTTTGTCCTCCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS CAA 90 bp | ATCCCATCAAGTCATCAGTGCAGACATCGCAGACGTTTTTCCCAGTaGCAAAATTCCAGTAAGGAAGGGAGAAAGAAGGCTCCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: IPSSHQCRHRRRFSQ*QNSSKEGRKKAPAA Trigger: TGCTGCAGGAGCCTTCTTTCTCCCTTCCTTACTGGAATTTTGCAACTGGGAAAAACGTCTGCGATGTCTGCACTGATGACTTGATGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CCA 72 bp | TGTGAAGGCTTCGAACAGCAGGGTCATATTTTCCCGTaGGAGCACTGTAACCTTCCACTGTATTTCGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: CEGFEQQGHIFP*EHCNLPLYFEN Trigger: GTTTTCGAAATACAGTGGAAGGTTACAGTGCTCCCACGGGAAAATATGACCCTGCTGTTCGAAGCCTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CCA 72 bp | GTCTGGAGCAGTAACAAACATTTCTGTGTTGGTAACTaGAGGCCAGAATGGCACCATGTTGTATTGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VWSSNKHFCVGN*RPEWHHVVLPV Trigger: AACAGGCAATACAACATGGTGCCATTCTGGCCTCCAGTTACCAACACAGAAATGTTTGTTACTGCTCCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS CAA 72 bp | CCCAGATTGTCTGGAGCAGTAACAAACATTTCTGTGTaGGTAACTGGAGGCCAGAATGGCACCATGTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: PRLSGAVTNISV*VTGGQNGTMLY Trigger: ATACAACATGGTGCCATTCTGGCCTCCAGTTACCAACACAGAAATGTTTGTTACTGCTCCAGACAATCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS TCA 72 bp | GTCCCACAGTTGTGTCCTGAGAAATTATCATTGCACTaGCATGTTCTATTAAAGAACCTCAGAGGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VPQLCPEKLSLH*HVLLKNLRGQA Trigger: AGCCTGGCCTCTGAGGTTCTTTAATAGAACATGTCAGTGCAATGATAATTTCTCAGGACACAACTGTGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
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| CDS TCA 72 bp | TCGTACTCTTCCAAGGATTCACAGACCACTCTCCATTaGGAAAAGACAGAGTTGGGGCTTATAAGAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SYSSKDSQTTLH*EKTELGLIRVE Trigger: TTCTACTCTTATAAGCCCCAACTCTGTCTTTTCTCAATGGAGAGTGGTCTGTGAATCCTTGGAAGAGTACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CCA 72 bp | TGGCCATTGAACTTCATAAGCATATCCCAGATTGTCTaGAGCAGTAACAAACATTTCTGTGTTGGTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: WPLNFISISQIV*SSNKHFCVGNW Trigger: CCAGTTACCAACACAGAAATGTTTGTTACTGCTCCAGACAATCTGGGATATGCTTATGAAGTTCAATGGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133932.2 |
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| CDS CAA 72 bp | AATGATTTCAGATACAGTAAACTCCTGACCTGGCCATaGAACTTCATAAGCATATCCCAGATTGTCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: NDFRYSKLLTWP*NFISISQIVWS Trigger: GCTCCAGACAATCTGGGATATGCTTATGAAGTTCAATGGCCAGGTCAGGAGTTTACTGTATCTGAAATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CAA 90 bp | AGCAATGGTAATGATTTCAGATACAGTAAACTCCTGACCTGGCCATaGAACTTCATAAGCATATCCCAGATTGTCTGGAGCAGTAACAAA | + |
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Preference number: 6 (lower is better) Translates to: SNGNDFRYSKLLTWP*NFISISQIVWSSNK Trigger: TTTGTTACTGCTCCAGACAATCTGGGATATGCTTATGAAGTTCAATGGCCAGGTCAGGAGTTTACTGTATCTGAAATCATTACCATTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 |
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| CDS CAA 72 bp | CCAAACAAAGTAGTTATAAACGGAAATGTTCTCAAATaGTGGTGTGTTGCCATCTGGTCCCAGTATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PNKVVINGNVLK*WCVAIWSQYVF Trigger: GAAGACATACTGGGACCAGATGGCAACACACCACAATTTGAGAACATTTCCGTTTATAACTACTTTGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006151.13 ENSMUST00000102831.8 ENSMUST00000133655.8 |
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