Pregenerated sensors for TYRO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027298Ensembl transcript IDs: ENSMUST00000028763.10, ENSMUST00000110783.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACAGCAACTTAATAGCTTAGAAATGTTCCTAACAGCAAGAGCCTaGCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCACCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: KQQLNSLEMFLTARA*PRACLNPSPGSTPA Trigger: GGCTGGGGTGGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAACATTTCTAAGCTATTAAGTTGCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGGCCTCCATACCTTGCTaGCTGGGCTGTGATCAGACT | + |
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Preference number: 2 (lower is better) Translates to: PGISAQVWWAVLSSRLQAASIPC*LGCDQT Trigger: AGTCTGATCACAGCCCAGGCAGCAAGGTATGGAGGC...CGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGGGAGCCTCCATACCTTaGTGCCTGGGCTGTGATCAG | + |
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Preference number: 2 (lower is better) Translates to: GKPGISAQVWWAVLSSRLGASIP*CLGCDQ Trigger: CTGATCACAGCCCAGGCAGCAAGGTATGGAGGCTCC...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTTCGGCCCAAGTGTGGTaGGCAGTGCTGAGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPSAQVW*AVLSSR Trigger: CCTGGAACTCAGCACTGCCCACCACACTTGGGCCGA...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGAGGCGGCTCCAAGCATaGACTAAAGTAGGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GKPGISAQVWWAVLSSRLRRLQA*TKVGAA Trigger: AGCTGCTCCTACTTTAGTGCATGCTTGGAGCCGCCT...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTCCAGTTCCAGGCCTTTaGAGGGTGGGGAATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPPVPGL*RVGNQE Trigger: TTCCTGATTCCCCACCCTGCAAAGGCCTGGAACTGG...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCTTTTGTCCTTCAGCATaGCTCAGAGCCCCACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: FLTARACPRACLNPSPGSFCPSA*LRAPQP Trigger: TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAA...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAGCTACCCTCCCTTACTaGCATCCACACCCATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: VEAWRGPEMPDSWTSPLAATLPY*HPHPWY Trigger: GTACCATGGGTGTGGATGGCAGTAAGGGAGGGTAGC...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAAGGCTGCAGGAAGAACTaGGATTGGGCAATTTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LPAACIQATSSGSPPLSQGCRKN*DWAIWS Trigger: GGACCAAATTGCCCAATCCCAGTTCTTCCTGCAGCC...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCACCATACCTTGCTGCCTaGGCTGTGATCAGACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRISVTFCPSACLRAPQPPYLAA*AVIRLG Trigger: GCCCAGTCTGATCACAGCCCAGGCAGCAAGGTATGG...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCATGGACATCTCTTTGTaGCTTAAGAGGGGCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: FLTARACPRACLNPSPGSMDISL*LKRGKP Trigger: AGGTTTGCCCCTCTTAAGTCACAAAGAGATGTCCAT...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCAGCCTCCATACCTTGCTaGCTGGGCTGTGATCAGACT | + |
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Preference number: 2 (lower is better) Translates to: SRISVTFCPSACLRAPQPASIPC*LGCDQT Trigger: AGTCTGATCACAGCCCAGGCAGCAAGGTATGGAGGC...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTGGAGCCTCCATACCTTaGTGCCTGGGCTGTGATCAG | + |
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Preference number: 2 (lower is better) Translates to: SPPARLRPCLLKSDLCNLGASIP*CLGCDQ Trigger: CTGATCACAGCCCAGGCAGCAAGGTATGGAGGCTCC...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCATCAGGCAACCAGCTCTaGCTCACCTCCTCTAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SRISVTFCPSACLRAPQPSGNQL*LTSSKP Trigger: TGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGA...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAGTTCCAGGCCTTTGCAGGGTGGGGAATCAGGAAGATGATGAGGATTCAAGGCGGCTCCAAGCATaGACTAAAGTAGGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QPVPGLCRVGNQEDDEDSRRLQA*TKVGAA Trigger: AGCTGCTCCTACTTTAGTGCATGCTTGGAGCCGCCT...TGAATCCTCATCATCTTCCTGATTCCCCACCCTGCAAAGGCCTGGAACTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTCCATACCTTGCTGCCTaGGCTGTGATCAGACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QPWFLELFLPTSAISSLSPYLAA*AVIRLG Trigger: GCCCAGTCTGATCACAGCCCAGGCAGCAAGGTATGG...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCATTAGGGACCCAAGTGTaGCAATCCCTTCCTAATCAT | + |
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Preference number: 2 (lower is better) Translates to: VEAWRGPEMPDSWTSPLALGTQV*QSLPNH Trigger: ATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTGGCTGCAGGAAGAACTaGGATTGGGCAATTTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: QPWFLELFLPTSAISSLSGCRKN*DWAIWS Trigger: GGACCAAATTGCCCAATCCCAGTTCTTCCTGCAGCC...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTTCAGACCCTGCCTTTTaGAGTCGGATCTCTGTAACC | + |
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Preference number: 2 (lower is better) Translates to: QPWFLELFLPTSAISSLSSDPAF*SRISVT Trigger: GGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGA...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGGGACCCAAGTGTGCCAATCCCTTCCTAATCATCACCTAAAAGGGAACAATATGGACATCTCTTTGTaGCTTAAGAGGGGCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: LGTQVCQSLPNHHLKGNNMDISL*LKRGKP Trigger: AGGTTTGCCCCTCTTAAGTCACAAAGAGATGTCCAT...ATTGTTCCCTTTTAGGTGATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CAA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCTGGGATTGGGCAATTaGGTCCGTCCAGGCGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: GKPGISAQVWWAVLSSRLLGLGN*VRPGAS Trigger: GCTGGCGCCTGGACGGACCAAATTGCCCAATCCCAG...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CAA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAGGGCCCACAGGGCTGTaGCTACCCTCCCTTACTGCC | + |
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Preference number: 3 (lower is better) Translates to: VEAWRGPEMPDSWTSPLAGPTGL*LPSLTA Trigger: GGCAGTAAGGGAGGGTAGCAACAGCCCTGTGGGCCC...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CAA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACTGGGATTGGGCAATTaGGTCCGTCCAGGCGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VEAWRGPEMPDSWTSPLALGLGN*VRPGAS Trigger: GCTGGCGCCTGGACGGACCAAATTGCCCAATCCCAG...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCCAGGAAGAACTGGGATaGGGCAATTTGGTCCGTCCA | + |
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Preference number: 3 (lower is better) Translates to: FLTARACPRACLNPSPGSQEELG*GNLVRP Trigger: TGGACGGACCAAATTGCCCAATCCCAGTTCTTCCTG...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR CCA 72 bp | GGGCTTGGTAGCATGCTCAGACAGACTGTAGAAGCTTaGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: GLGSMLRQTVEA*RGPEMPDSWTS Trigger: GCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTACAGTCTGTCTGAGCATGCTACCAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCGATCTCTGTAACCTTTaGTCCTTCAGCATGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FLTARACPRACLNPSPGSDLCNL*SFSMPQ Trigger: CTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATC...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCACAGGAAGAACTGGGATaGGGCAATTTGGTCCGTCCA | + |
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Preference number: 3 (lower is better) Translates to: SRISVTFCPSACLRAPQPQEELG*GNLVRP Trigger: TGGACGGACCAAATTGCCCAATCCCAGTTCTTCCTG...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| 3UTR GCA 72 bp | CTTAATAGCTTAGAAATGTTCCTAACAGCAAGAGCCTaGCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LNSLEMFLTARA*PRACLNPSPGS Trigger: GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAACATTTCTAAGCTATTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR TCA 90 bp | GTGATCAGACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCGCTGCAGGCGGTGCTTaGAGGCGAACAATGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VIRLGLVRQHSGQQSQGPAAGGA*RRTMAG Trigger: ACCAGCCATTGTTCGCCTTCAAGCACCGCCTGCAGC...GGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGTCTGATCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | GTGATCAGACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCATTGAGGGGGCTTTCTaGCTGCTGCTCCAGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VIRLGLVRQHSGQQSQGPIEGAF*LLLQLP Trigger: GGGCAGCTGGAGCAGCAGCCAGAAAGCCCCCTCAAT...GGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGTCTGATCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR TCA 90 bp | GTGATCAGACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCATAGCCCTCCGGGGCTaGAGATGTACCGAGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: VIRLGLVRQHSGQQSQGPIALRG*RCTESH Trigger: GTGACTCTCGGTACATCTTCAGCCCCGGAGGGCTAT...GGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGTCTGATCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCGTGAAGCTTGGGCGCTaGTTGGGGTCGGCGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLTARACPRACLNPSPGSVKLGR*LGSALQ Trigger: CTGGAGCGCCGACCCCAAGCAGCGCCCAAGCTTCAC...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | GTGATCAGACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCACGGTCATCTTCACTaGGGCGCCCATGAGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VIRLGLVRQHSGQQSQGPHGHLH*GAHELQ Trigger: CTGAAGCTCATGGGCGCCCCAGTGAAGATGACCGTG...GGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGTCTGATCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | ACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCAACTTTCGGTGTTGAAAGGAGCTaGAGGCGGTGCTTGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TGPSQAAQRSAEPGAPTFGVERS*RRCLKA Trigger: CGCCTTCAAGCACCGCCTGCAGCTCCTTTCAACACC...GAAAGTTGGGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTATGCACTCCGGAGGCTaGTTCAGGCGGTTCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPMHSGG*FRRFPP Trigger: CGGCGGGAACCGCCTGAAGCAGCCTCCGGAGTGCAT...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAGGGGATGCCACCTACTaGCCCCACGCCACTGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: VEAWRGPEMPDSWTSPLAGDATY*PHATAV Trigger: GACGGCAGTGGCGTGGGGGCAGTAGGTGGCATCCCC...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCGGCTGCTGCTCCAGCTaGCCTGGTGACTCGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: FLTARACPRACLNPSPGSGCCSS*PGDSDS Trigger: GCTATCCGAGTCACCAGGGCAGCTGGAGCAGCAGCC...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGGGCTGCTGCTCCAGCTaGCCTGGTGACTCGGATAGC | + |
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Preference number: 4 (lower is better) Translates to: GKPGISAQVWWAVLSSRLGCCSS*PGDSDS Trigger: GCTATCCGAGTCACCAGGGCAGCTGGAGCAGCAGCC...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCAGGGGGCTTTCTGGCTaGTGCTCCAGCTGCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FLTARACPRACLNPSPGSRGLSG*CSSCPG Trigger: ACCAGGGCAGCTGGAGCAGCAGCCAGAAAGCCCCCT...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | ATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGGCTCCAAAGGCGAACAATGGCTaGTCGGGAAGTGGCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ISAQVWWAVLSSRLQAAPKANNG*SGSGQA Trigger: GGCCTGGCCACTTCCCGACCAGCCATTGTTCGCCTT...TGGAGCCGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCCGGAAGTGTACAGCTaGCTCCCCTCGGGCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: GKPGISAQVWWAVLSSRLPEVYS*LPSGHD Trigger: GTCATGGCCCGAGGGGAGCCAGCTGTACACTTCCGG...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGAACCGGACCAGGGTCTaGAGGGGCAGGTTAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PGISAQVWWAVLSSRLQANRTRV*RGRLKG Trigger: CCCTTTTAACCTGCCCCTCCAGACCCTGGTCCGGTT...CGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCAACTTTCAACCGGACCAGGGTCTaGAGGGGCAGGTTAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TGPSQAAQRSAEPGAPTFNRTRV*RGRLKG Trigger: CCCTTTTAACCTGCCCCTCCAGACCCTGGTCCGGTT...GAAAGTTGGGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | ATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGGCTCCAATTGAGGGGGCTTTCTaGCTGCTGCTCCAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISAQVWWAVLSSRLQAAPIEGAF*LLLQLP Trigger: GGGCAGCTGGAGCAGCAGCCAGAAAGCCCCCTCAAT...TGGAGCCGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAACCTCCACGCTGCAGTTaGGCTTCACTGGCTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPAACIQATSSGSPPLSQPPRCS*ASLAAP Trigger: AGGGGCAGCCAGTGAAGCTCAACTGCAGCGTGGAGG...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAGTGAAGCTTGGGCGCTaGTTGGGGTCGGCGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEAWRGPEMPDSWTSPLAVKLGR*LGSALQ Trigger: CTGGAGCGCCGACCCCAAGCAGCGCCCAAGCTTCAC...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTCGTCCCCTGCCTCGCTaGTGGATCGCTCTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPRPLPR*WIALHS Trigger: ACTGTGGAGAGCGATCCAGCAGCGAGGCAGGGGACG...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTGGGCTTTCTGGCTGCTaGTCCAGCTGCCCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPGLSGC*SSCPGD Trigger: GTCACCAGGGCAGCTGGAGCAGCAGCCAGAAAGCCC...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAACCGGAAGTGTACAGCTaGCTCCCCTCGGGCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPAACIQATSSGSPPLSQPEVYS*LPSGHD Trigger: GTCATGGCCCGAGGGGAGCCAGCTGTACACTTCCGG...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGATGTACAAGGGGTCCTaGCTGGTGGACAGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGISAQVWWAVLSSRLQAMYKGS*LVDSTD Trigger: GTCTGTGCTGTCCACCAGCCAGGACCCCTTGTACAT...CGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCATAGCCCTCCGGGGCTaGAGATGTACCGAGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLTARACPRACLNPSPGSIALRG*RCTESH Trigger: GTGACTCTCGGTACATCTTCAGCCCCGGAGGGCTAT...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGTTCCAGGCCTTTGCAGGGTGGGGAATCAGGAAGATGATGAGGATTCACATGAGCTTCAGGCCTaGGGCCGCAGACCCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPVPGLCRVGNQEDDEDSHELQA*GRRPGE Trigger: CTCCCCGGGTCTGCGGCCGCAGGCCTGAAGCTCATG...TGAATCCTCATCATCTTCCTGATTCCCCACCCTGCAAAGGCCTGGAACTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028763.10 |
||
| CDS-3UTR GCA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGAGGGCCCTGCCTCCCTaGATGGTCATGAGAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GKPGISAQVWWAVLSSRLRALPP*MVMRRH Trigger: GTGTCTTCTCATGACCATGCAGGGAGGCAGGGCCCT...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCAACTTTCATCCAAACTCTCCTTTaGCCAACATCCGACCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGPSQAAQRSAEPGAPTFIQTLL*PTSDRG Trigger: CCCTCGGTCGGATGTTGGGCAAAGGAGAGTTTGGAT...GAAAGTTGGGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGATCCAAACTCTCCTTTaGCCAACATCCGACCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGISAQVWWAVLSSRLQAIQTLL*PTSDRG Trigger: CCCTCGGTCGGATGTTGGGCAAAGGAGAGTTTGGAT...CGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCAGACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCTCTCGGCATTTTCAATaGCAGCATATGGCGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIRLGLVRQHSGQQSQGPSRHFQ*QHMASA Trigger: GGCAGACGCCATATGCTGGCATTGAAAATGCCGAGA...GGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGTCTGATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTCTGCCCCCACGCCACTaGCGTCCCCTGCCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSLPPRH*RPLPRC Trigger: GCAGCGAGGCAGGGGACGGCAGTGGCGTGGGGGCAG...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTCAGGCCTTTCTCGATTaGAAGATCGGGCTGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPQAFLD*KIGLPG Trigger: TCCGGGCAGCCCGATCTTTCAATCGAGAAAGGCCTG...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCAACTTTCCACAAGAAAACTCTGTaGGCTGGGTCACTCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGPSQAAQRSAEPGAPTFHKKTL*AGSLLS Trigger: TGACAGGAGTGACCCAGCGCACAGAGTTTTCTTGTG...GAAAGTTGGGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAACACGGTCATCTTCACTaGGGCGCCCATGAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPAACIQATSSGSPPLSQHGHLH*GAHELQ Trigger: CTGAAGCTCATGGGCGCCCCAGTGAAGATGACCGTG...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAACGGTCAGATTGGCCCTaGTCCCTTCCACCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPAACIQATSSGSPPLSQRSDWP*SLPPSA Trigger: AGCTGATGGTGGAAGGGACCAGGGCCAATCTGACCG...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCAACTTTCCTTTTGGTTCCACTGTaGAGAATGGCACACCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TGPSQAAQRSAEPGAPTFLLVPL*RMAHLR Trigger: TCGAAGGTGTGCCATTCTTCACAGTGGAACCAAAAG...GAAAGTTGGGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR TCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCAGCTCCCCTCGGGCCATaGCACTGTCAAAGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPAPLGP*HCQRLA Trigger: GGCAAGCCTTTGACAGTGTCATGGCCCGAGGGGAGC...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCACGTCCCCTGCCTCGCTaGTGGATCGCTCTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPRPLPR*WIALHS Trigger: ACTGTGGAGAGCGATCCAGCAGCGAGGCAGGGGACG...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTGGGGATGCCACCTACTaGCCCCACGCCACTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSGDATY*PHATAV Trigger: GACGGCAGTGGCGTGGGGGCAGTAGGTGGCATCCCC...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAAAATTCTGAGGAGCTCTaGCTGGCGCTAGGCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPAACIQATSSGSPPLSQNSEEL*LALGPL Trigger: CAAAGGGCCTAGCGCCAGCCAGAGCTCCTCAGAATT...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGACCATCAGCTCATCCTaGGTTCCATTTTCTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PGISAQVWWAVLSSRLQATISSS*VPFSWT Trigger: GGTCCAAGAAAATGGAACCCAGGATGAGCTGATGGT...CGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGTCTTCCTGCTTTAGCTaGGCTTCCCGCACTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKPGISAQVWWAVLSSRLSSCFS*ASRTDP Trigger: TGGATCAGTGCGGGAAGCCCAGCTAAAGCAGGAAGA...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR TCA 90 bp | CCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGGACAGTGAGCCATACTaGCTGAGAAATCTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGISAQVWWAVLSSRLQADSEPY*LRNLGF Trigger: GAAACCAAGATTTCTCAGTCAGTATGGCTCACTGTC...CGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR TCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCAGCTGCAGGCGGTGCTTaGAGGCGAACAATGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPAAGGA*RRTMAG Trigger: ACCAGCCATTGTTCGCCTTCAAGCACCGCCTGCAGC...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCCCACTCTCAGTAGGCTaGTCAGCTCTCTCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLTARACPRACLNPSPGSPLSVG*SALSML Trigger: CAACATTGAGAGAGCTGAGCAGCCTACTGAGAGTGG...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | GGCAAACCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCTCTCCACCAGTAAATaGTTACGGGTTCTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKPGISAQVWWAVLSSRLLSTSK*LRVLED Trigger: GTCCTCCAGAACCCGTAACCATTTACTGGTGGAGAG...CAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGGTTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCAAAGGCGAACAATGGCTaGTCGGGAAGTGGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPKANNG*SGSGQA Trigger: GGCCTGGCCACTTCCCGACCAGCCATTGTTCGCCTT...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAAATTCTGAGGAGCTCTaGCTGGCGCTAGGCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VEAWRGPEMPDSWTSPLANSEEL*LALGPL Trigger: CAAAGGGCCTAGCGCCAGCCAGAGCTCCTCAGAATT...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTTCTTCCTGCTTTAGCTaGGCTTCCCGCACTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPSSCFS*ASRTDP Trigger: TGGATCAGTGCGGGAAGCCCAGCTAAAGCAGGAAGA...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAATGTACAAGGGGTCCTaGCTGGTGGACAGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VEAWRGPEMPDSWTSPLAMYKGS*LVDSTD Trigger: GTCTGTGCTGTCCACCAGCCAGGACCCCTTGTACAT...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTCCTCCACGCTGCAGTTaGGCTTCACTGGCTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSPPRCS*ASLAAP Trigger: AGGGGCAGCCAGTGAAGCTCAACTGCAGCGTGGAGG...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTGCTCCCCTCGGGCCATaGCACTGTCAAAGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSAPLGP*HCQRLA Trigger: GGCAAGCCTTTGACAGTGTCATGGCCCGAGGGGAGC...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCACAGGCCTTTCTCGATTaGAAGATCGGGCTGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPQAFLD*KIGLPG Trigger: TCCGGGCAGCCCGATCTTTCAATCGAGAAAGGCCTG...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCTCCAGCACTGGTACATaGGATCATACACTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTARACPRACLNPSPGSSSTGT*DHTLPP Trigger: TGGAGGAAGTGTATGATCTCATGTACCAGTGCTGGA...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGTTCCAGGCCTTTGCAGGGTGGGGAATCAGGAAGATGATGAGGATTCAAGGGCCCTGCCTCCCTaGATGGTCATGAGAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: QPVPGLCRVGNQEDDEDSRALPP*MVMRRH Trigger: GTGTCTTCTCATGACCATGCAGGGAGGCAGGGCCCT...TGAATCCTCATCATCTTCCTGATTCCCCACCCTGCAAAGGCCTGGAACTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTCCAATGTGGCCTCAATaGGTTCAGGCCTTTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPPMWPQ*VQAFLD Trigger: ATCGAGAAAGGCCTGAACGCATTGAGGCCACATTGG...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGGCTCCACTGACTGAGAAATCTTaGTTTCCTCCCCATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISAQVWWAVLSSRLQAAPLTEKS*FPPHPS Trigger: TGAAGGATGGGGAGGAAACCAAGATTTCTCAGTCAG...TGGAGCCGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAACAGCAAGAGCCTGCCCAAGAGCCTGCCTCAACCCCAGCCCTGGTTCCTTCCACTGTGAAGAATaGCACACCTTCGACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTARACPRACLNPSPGSFHCEE*HTFDSE Trigger: CTCACTGTCGAAGGTGTGCCATTCTTCACAGTGGAA...GGAACCAGGGCTGGGGTTGAGGCAGGCTCTTGGGCAGGCTCTTGCTGTTAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCACGGTCAGATTGGCCCTaGTCCCTTCCACCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPRSDWP*SLPPSA Trigger: AGCTGATGGTGGAAGGGACCAGGGCCAATCTGACCG...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCAATGGCATGGAAATTCTaGGGAGCTCTGGCTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPMAWKF*GALAGA Trigger: AGCGCCAGCCAGAGCTCCTCAGAATTTCCATGCCAT...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTGGTGTTGAAAGGAGCTaGAGGCGGTGCTTGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPPARLRPCLLKSDLCNLGVERS*RRCLKA Trigger: CGCCTTCAAGCACCGCCTGCAGCTCCTTTCAACACC...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTTTCCACTGTGAAGAATaGCACACCTTCGACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPFHCEE*HTFDSE Trigger: CTCACTGTCGAAGGTGTGCCATTCTTCACAGTGGAA...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAAAAATCAGGTCCTTCTaGGGATCCCAGTCGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEAWRGPEMPDSWTSPLAKIRSF*GSQSVR Trigger: TCTGACCGACTGGGATCCCCAGAAGGACCTGATTTT...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGGACCCAAGTGTGCCAATCCCTTCCTAATCATCACCTAAAAGGGAACAATATGCACTCCGGAGGCTaGTTCAGGCGGTTCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGTQVCQSLPNHHLKGNNMHSGG*FRRFPP Trigger: CGGCGGGAACCGCCTGAAGCAGCCTCCGGAGTGCAT...ATTGTTCCCTTTTAGGTGATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTTGGCTGGTCGGGAAGTaGCCAGGCCTTTTATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPARLRPCLLKSDLCNLWLVGK*PGLLCC Trigger: GCAACATAAAAGGCCTGGCCACTTCCCGACCAGCCA...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAACCATCAGCTCATCCTaGGTTCCATTTTCTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VEAWRGPEMPDSWTSPLATISSS*VPFSWT Trigger: GGTCCAAGAAAATGGAACCCAGGATGAGCTGATGGT...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTCATCACCAATTGCATTaGAGGCACACACACGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPHHQLH*RHTHAK Trigger: TTTTGCGTGTGTGTGCCTCCAATGCAATTGGTGATG...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| 3UTR CAA 72 bp | AGCACCTCTCCACCTGCCAGACTCAGACCCTGCCTTTaGAAGTCGGATCTCTGTAACCTTTTGTCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STSPPARLRPCL*KSDLCNLLSFS Trigger: GCTGAAGGACAAAAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGTTCCAGGCCTTTGCAGGGTGGGGAATCAGGAAGATGATGAGGATTCACACAAGAAAACTCTGTaGGCTGGGTCACTCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPVPGLCRVGNQEDDEDSHKKTL*AGSLLS Trigger: TGACAGGAGTGACCCAGCGCACAGAGTTTTCTTGTG...TGAATCCTCATCATCTTCCTGATTCCCCACCCTGCAAAGGCCTGGAACTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGTTCCAGGCCTTTGCAGGGTGGGGAATCAGGAAGATGATGAGGATTCATCTCGGCATTTTCAATaGCAGCATATGGCGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPVPGLCRVGNQEDDEDSSRHFQ*QHMASA Trigger: GGCAGACGCCATATGCTGGCATTGAAAATGCCGAGA...TGAATCCTCATCATCTTCCTGATTCCCCACCCTGCAAAGGCCTGGAACTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGGACCCAAGTGTGCCAATCCCTTCCTAATCATCACCTAAAAGGGAACAATGGGCTTTCTGGCTGCTaGTCCAGCTGCCCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGTQVCQSLPNHHLKGNNGLSGC*SSCPGD Trigger: GTCACCAGGGCAGCTGGAGCAGCAGCCAGAAAGCCC...ATTGTTCCCTTTTAGGTGATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTCCATCCTTCATCCAGTaGATGTCAGGGTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPPARLRPCLLKSDLCNLPSFIQ*MSGSSI Trigger: GATGGAGGACCCTGACATCCACTGGATGAAGGATGG...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTTGGCTGGTCGGGAAGTaGCCAGGCCTTTTATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSWLVGK*PGLLCC Trigger: GCAACATAAAAGGCCTGGCCACTTCCCGACCAGCCA...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCAAAAATCAGGTCCTTCTaGGGATCCCAGTCGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPKIRSF*GSQSVR Trigger: TCTGACCGACTGGGATCCCCAGAAGGACCTGATTTT...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTCCAATGTGGCCTCAATaGGTTCAGGCCTTTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPARLRPCLLKSDLCNLPMWPQ*VQAFLD Trigger: ATCGAGAAAGGCCTGAACGCATTGAGGCCACATTGG...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTCCACTCTCAGTAGGCTaGTCAGCTCTCTCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPARLRPCLLKSDLCNLPLSVG*SALSML Trigger: CAACATTGAGAGAGCTGAGCAGCCTACTGAGAGTGG...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTCCATCCTTCATCCAGTaGATGTCAGGGTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSPSFIQ*MSGSSI Trigger: GATGGAGGACCCTGACATCCACTGGATGAAGGATGG...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTCTCTCCACCAGTAAATaGTTACGGGTTCTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPPARLRPCLLKSDLCNLLSTSK*LRVLED Trigger: GTCCTCCAGAACCCGTAACCATTTACTGGTGGAGAG...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | AGTCGGATCTCTGTAACCTTTTGTCCTTCAGCATGCCTCAGAGCCCCACAGCCAGACAGTGAGCCATACTaGCTGAGAAATCTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRISVTFCPSACLRAPQPDSEPY*LRNLGF Trigger: GAAACCAAGATTTCTCAGTCAGTATGGCTCACTGTC...TGGCTGTGGGGCTCTGAGGCATGCTGAAGGACAAAAGGTTACAGAGATCCGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGGACCCAAGTGTGCCAATCCCTTCCTAATCATCACCTAAAAGGGAACAATATGGCATGGAAATTCTaGGGAGCTCTGGCTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTQVCQSLPNHHLKGNNMAWKF*GALAGA Trigger: AGCGCCAGCCAGAGCTCCTCAGAATTTCCATGCCAT...ATTGTTCCCTTTTAGGTGATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTCTCTTCTATGTCGCTTaGGGCAATGATGTCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSLFYVA*GNDVSF Trigger: AAAGCTGACATCATTGCCTCAAGCGACATAGAAGAG...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTCATCACCAATTGCATTaGAGGCACACACACGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLELFLPTSAISSLSHHQLH*RHTHAK Trigger: TTTTGCGTGTGTGTGCCTCCAATGCAATTGGTGATG...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGGACCCAAGTGTGCCAATCCCTTCCTAATCATCACCTAAAAGGGAACAATTCCAGCACTGGTACATaGGATCATACACTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTQVCQSLPNHHLKGNNSSTGT*DHTLPP Trigger: TGGAGGAAGTGTATGATCTCATGTACCAGTGCTGGA...ATTGTTCCCTTTTAGGTGATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGGACCCAAGTGTGCCAATCCCTTCCTAATCATCACCTAAAAGGGAACAATCTCTTCTATGTCGCTTaGGGCAATGATGTCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTQVCQSLPNHHLKGNNLFYVA*GNDVSF Trigger: AAAGCTGACATCATTGCCTCAAGCGACATAGAAGAG...ATTGTTCCCTTTTAGGTGATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS CCA 90 bp | GCAGTTGAGCTTCACTGGCTGCCCCTGAGACACGGTCATCTTCACTaGGGCGCCCATGAGCTTCAGGCCTGCGGCCGCAGACCCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVELHWLPLRHGHLH*GAHELQACGRRPGE Trigger: CTCCCCGGGTCTGCGGCCGCAGGCCTGAAGCTCATGGGCGCCCCAGTGAAGATGACCGTGTCTCAGGGGCAGCCAGTGAAGCTCAACTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028763.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGCATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGAAGCTTGGGCGCTGCTaGGGGTCGGCGCTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGISAQVWWAVLSSRLQAKLGRC*GSALQH Trigger: GTGCTGGAGCGCCGACCCCAAGCAGCGCCCAAGCTT...CGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAATGCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | GTGATCAGACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCGAAGGGCCCAAGGCATaGGCACAGCGCACCCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VIRLGLVRQHSGQQSQGPEGPKA*AQRTLR Trigger: CCTTAGGGTGCGCTGTGCCAATGCCTTGGGCCCTTC...GGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGTCTGATCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS CCA 90 bp | ACGCCACTGCCGTCCCCTGCCTCGCTGCTGGATCGCTCTCCACAGTaGACCTCAGGGCTGCCACTCTCAGTAGGCTGCTCAGCTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPLPSPASLLDRSPQ*TSGLPLSVGCSALS Trigger: TGAGAGAGCTGAGCAGCCTACTGAGAGTGGCAGCCCTGAGGTCCACTGTGGAGAGCGATCCAGCAGCGAGGCAGGGGACGGCAGTGGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCAACTTTCTCAGGCCTTTCTCGATaGAAAGATCGGGCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGPSQAAQRSAEPGAPTFSGLSR*KDRAAR Trigger: CCGGGCAGCCCGATCTTTCAATCGAGAAAGGCCTGA...GAAAGTTGGGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAATCAGGCCTTTCTCGATaGAAAGATCGGGCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPAACIQATSSGSPPLSQSGLSR*KDRAAR Trigger: CCGGGCAGCCCGATCTTTCAATCGAGAAAGGCCTGA...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTAGCCTCTGGTTCTCATaGAGGGGGCTTTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPSLWFS*RGLSGC Trigger: GCAGCCAGAAAGCCCCCTCAATGAGAACCAGAGGCT...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCGGCCCAAGTGTGGTGGGCAGTGCTGAGTTCCAGGCTGCAGGCGGCTCCACCATCACCAATTGCATaGGAGGCACACACACGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ISAQVWWAVLSSRLQAAPPSPIA*EAHTRK Trigger: TTTGCGTGTGTGTGCCTCCAATGCAATTGGTGATGG...TGGAGCCGCCTGCAGCCTGGAACTCAGCACTGCCCACCACACTTGGGCCGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCACCTGACACTGTCAAAGGCTaGCCCGAAACGCGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EAWRGPEMPDSWTSPLAPDTVKG*PETRLL Trigger: AAGGAGACGCGTTTCGGGCAAGCCTTTGACAGTGTC...AGGTGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGCCTAGTCAGGCAGCACAGCGGTCAGCAGAGCCAGGGGCCCCAACTTTCTGTACAGTATACAAGTaGTCAGCCAAGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGPSQAAQRSAEPGAPTFCTVYK*SAKLSR Trigger: CCTGGAGAGCTTGGCTGACAACTTGTATACTGTACA...GAAAGTTGGGGCCCCTGGCTCTGCTGACCGCTGTGCTGCCTGACTAGGCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTGGTTCCTGGAACTTTTCTTACCCACATCAGCCATCAGTAGTCTCTCTAAGCTTGGGCGCTGCTaGGGGTCGGCGCTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QPWFLELFLPTSAISSLSKLGRC*GSALQH Trigger: GTGCTGGAGCGCCGACCCCAAGCAGCGCCCAAGCTT...AGAGAGACTACTGATGGCTGATGTGGGTAAGAAAAGTTCCAGGAACCAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAAGCCTCTGGTTCTCATaGAGGGGGCTTTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VEAWRGPEMPDSWTSPLASLWFS*RGLSGC Trigger: GCAGCCAGAAAGCCCCCTCAATGAGAACCAGAGGCT...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS GCA 90 bp | GCTGGAGATCGTTGTTACTGTGGTGTTGAAAGGAGCTGCAGGCGGTaGTTGAAGGCGAACAATGGCTGGTCGGGAAGTGGCCAGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGDRCYCGVERSCRR*LKANNGWSGSGQAF Trigger: AAAGGCCTGGCCACTTCCCGACCAGCCATTGTTCGCCTTCAAGCACCGCCTGCAGCTCCTTTCAACACCACAGTAACAACGATCTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS CCA 90 bp | GCAGTTGAGCTTCACTGGCTGCCCCTGAGACACGGTCATCTTCACTaGGGCGCCCATGAGCTTCAGGCCTTTAATCGCCAAGTATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVELHWLPLRHGHLH*GAHELQAFNRQVFS Trigger: GGAGAATACTTGGCGATTAAAGGCCTGAAGCTCATGGGCGCCCCAGTGAAGATGACCGTGTCTCAGGGGCAGCCAGTGAAGCTCAACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110783.8 |
||
| CDS GCA 90 bp | AGCGTTGTAGCTGGAGATCGTTGTTACTGTGGTGTTGAAAGGAGCTaGAGGCGGTGCTTGAAGGCGAACAATGGCTGGTCGGGAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVVAGDRCYCGVERS*RRCLKANNGWSGSG Trigger: GCCACTTCCCGACCAGCCATTGTTCGCCTTCAAGCACCGCCTGCAGCTCCTTTCAACACCACAGTAACAACGATCTCCAGCTACAACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAAGCTTGGAGGGGTCCTGAAATGCCTGACTCCTGGACCAGCCCCTTAGCAGTTGTTACTGTGGTGTaGAAAGGAGCTGCAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: VEAWRGPEMPDSWTSPLAVVTVV*KGAAGG Trigger: ACCGCCTGCAGCTCCTTTCAACACCACAGTAACAAC...TGCTAAGGGGCTGGTCCAGGAGTCAGGCATTTCAGGACCCCTCCAAGCTTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS TCA 90 bp | GAGATCGTTGTTACTGTGGTGTTGAAAGGAGCTGCAGGCGGTGCTTaGAGGCGAACAATGGCTGGTCGGGAAGTGGCCAGGCCTTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: EIVVTVVLKGAAGGA*RRTMAGREVARPFM Trigger: CATAAAAGGCCTGGCCACTTCCCGACCAGCCATTGTTCGCCTTCAAGCACCGCCTGCAGCTCCTTTCAACACCACAGTAACAACGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGTTCCAGGCCTTTGCAGGGTGGGGAATCAGGAAGATGATGAGGATTCAGACACTGTCAAAGGCTaGCCCGAAACGCGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QPVPGLCRVGNQEDDEDSDTVKG*PETRLL Trigger: AAGGAGACGCGTTTCGGGCAAGCCTTTGACAGTGTC...TGAATCCTCATCATCTTCCTGATTCCCCACCCTGCAAAGGCCTGGAACTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGCTGCCTGCATTCAGGCAACCAGCTCTGGCTCACCTCCTCTAAGCCAATGTACAGTATACAAGTaGTCAGCCAAGCTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPAACIQATSSGSPPLSQCTVYK*SAKLSR Trigger: CCTGGAGAGCTTGGCTGACAACTTGTATACTGTACA...TTGGCTTAGAGGAGGTGAGCCAGAGCTGGTTGCCTGAATGCAGGCAGCTGGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCTGCCAGACTCAGACCCTGCCTTTTGAAGTCGGATCTCTGTAACCTTGTTGTTACTGTGGTGTaGAAAGGAGCTGCAGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPPARLRPCLLKSDLCNLVVTVV*KGAAGG Trigger: ACCGCCTGCAGCTCCTTTCAACACCACAGTAACAAC...AAGGTTACAGAGATCCGACTTCAAAAGGCAGGGTCTGAGTCTGGCAGGTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS-3UTR CAA 90 bp | TTAGGGACCCAAGTGTGCCAATCCCTTCCTAATCATCACCTAAAAGGGAACAATGAAGGGCCCAAGGCATaGGCACAGCGCACCCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: LGTQVCQSLPNHHLKGNNEGPKA*AQRTLR Trigger: CCTTAGGGTGCGCTGTGCCAATGCCTTGGGCCCTTC...ATTGTTCCCTTTTAGGTGATGATTAGGAAGGGATTGGCACACTTGGGTCCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS CCA 72 bp | CTGCCCCCACGCCACTGCCGTCCCCTGCCTCGCTGCTaGATCGCTCTCCACAGTGGACCTCAGGGCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LPPRHCRPLPRC*IALHSGPQGCH Trigger: GTGGCAGCCCTGAGGTCCACTGTGGAGAGCGATCCAGCAGCGAGGCAGGGGACGGCAGTGGCGTGGGGGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS GCA 72 bp | CTACTGCCCCCACGCCACTGCCGTCCCCTGCCTCGCTaGTGGATCGCTCTCCACAGTGGACCTCAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLPPRHCRPLPR*WIALHSGPQGC Trigger: GCAGCCCTGAGGTCCACTGTGGAGAGCGATCCAGCAGCGAGGCAGGGGACGGCAGTGGCGTGGGGGCAGTAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS GCA 72 bp | GGTCATCTTCACTGGGGCGCCCATGAGCTTCAGGCCTaGGGCCGCAGACCCGGGGAGCAGCAGAGAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GHLHWGAHELQA*GRRPGEQQRSQ Trigger: CTGGCTTCTCTGCTGCTCCCCGGGTCTGCGGCCGCAGGCCTGAAGCTCATGGGCGCCCCAGTGAAGATGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028763.10 |
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| CDS GCA 72 bp | GATGCCACCTACTGCCCCCACGCCACTGCCGTCCCCTaGCTCGCTGCTGGATCGCTCTCCACAGTGGACCTC | + |
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Preference number: 6 (lower is better) Translates to: DATYCPHATAVP*LAAGSLSTVDL Trigger: GAGGTCCACTGTGGAGAGCGATCCAGCAGCGAGGCAGGGGACGGCAGTGGCGTGGGGGCAGTAGGTGGCATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS CCA 72 bp | CTTCACTGGCTGCCCCTGAGACACGGTCATCTTCACTaGGGCGCCCATGAGCTTCAGGCCTGCGGCCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LHWLPLRHGHLH*GAHELQACGRR Trigger: TCTGCGGCCGCAGGCCTGAAGCTCATGGGCGCCCCAGTGAAGATGACCGTGTCTCAGGGGCAGCCAGTGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028763.10 |
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| CDS CCA 72 bp | CCGTCCCCTGCCTCGCTGCTGGATCGCTCTCCACAGTaGACCTCAGGGCTGCCACTCTCAGTAGGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSPASLLDRSPQ*TSGLPLSVGCS Trigger: TGAGCAGCCTACTGAGAGTGGCAGCCCTGAGGTCCACTGTGGAGAGCGATCCAGCAGCGAGGCAGGGGACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS TCA 72 bp | CCAGCTGCCCTGGTGACTCGGATAGCCCTCCGGGGCTaGAGATGTACCGAGAGTCACTGGGGATGCCACCTA | + |
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Preference number: 6 (lower is better) Translates to: PAALVTRIALRG*RCTESHWGCHL Trigger: TAGGTGGCATCCCCAGTGACTCTCGGTACATCTTCAGCCCCGGAGGGCTATCCGAGTCACCAGGGCAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS GCA 72 bp | CCAGCTGTGCTCGCTGATGGAGATGGACACCTGGCTTaGATTCTGGACCACGGTGCCATCCTTCATCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PAVLADGDGHLA*ILDHGAILHPV Trigger: CACTGGATGAAGGATGGCACCGTGGTCCAGAATGCAAGCCAGGTGTCCATCTCCATCAGCGAGCACAGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS GCA 72 bp | AATGCGTTCAGGCCTTTCTCGATTGAAAGATCGGGCTaGCCGGAAGTGTACAGCTGGCTCCCCTCGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: NAFRPFSIERSG*PEVYSWLPSGH Trigger: ATGGCCCGAGGGGAGCCAGCTGTACACTTCCGGGCAGCCCGATCTTTCAATCGAGAAAGGCCTGAACGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS CCA 72 bp | CTTCACTGGCTGCCCCTGAGACACGGTCATCTTCACTaGGGCGCCCATGAGCTTCAGGCCTTTAATCGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LHWLPLRHGHLH*GAHELQAFNRQ Trigger: TTGGCGATTAAAGGCCTGAAGCTCATGGGCGCCCCAGTGAAGATGACCGTGTCTCAGGGGCAGCCAGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110783.8 |
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| CDS CAA 72 bp | TGTTACTGTGGTGTTGAAAGGAGCTGCAGGCGGTGCTaGAAGGCGAACAATGGCTGGTCGGGAAGTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: CYCGVERSCRRC*KANNGWSGSGQ Trigger: CTGGCCACTTCCCGACCAGCCATTGTTCGCCTTCAAGCACCGCCTGCAGCTCCTTTCAACACCACAGTAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS CCA 72 bp | TGCTCGCTGATGGAGATGGACACCTGGCTTGCATTCTaGACCACGGTGCCATCCTTCATCCAGTGGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: CSLMEMDTWLAF*TTVPSFIQWMS Trigger: TGACATCCACTGGATGAAGGATGGCACCGTGGTCCAGAATGCAAGCCAGGTGTCCATCTCCATCAGCGAGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS CAA 90 bp | GGAGATCGTTGTTACTGTGGTGTTGAAAGGAGCTGCAGGCGGTGCTaGAAGGCGAACAATGGCTGGTCGGGAAGTGGCCAGGCCTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: GDRCYCGVERSCRRC*KANNGWSGSGQAFY Trigger: ATAAAAGGCCTGGCCACTTCCCGACCAGCCATTGTTCGCCTTCAAGCACCGCCTGCAGCTCCTTTCAACACCACAGTAACAACGATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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| CDS GCA 72 bp | TCCACTGACTTTAGGCTGAGTAAGCCAATCCAGCTGTaGTCGCTGATGGAGATGGACACCTGGCTTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: STDFRLSKPIQL*SLMEMDTWLAF Trigger: GAATGCAAGCCAGGTGTCCATCTCCATCAGCGAGCACAGCTGGATTGGCTTACTCAGCCTAAAGTCAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028763.10 ENSMUST00000110783.8 |
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