Pregenerated sensors for TYR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004651Ensembl transcript IDs: ENSMUST00000004770.7, ENSMUST00000207834.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGCTGTTCCCATTCCTTTGGCTCTTGGGCTTGATGATTTCAGATTaGAGTCAAGCCGACTTGAAGCTTCAGATGTTACTGAGTCATCTG | + |
|
Preference number: 1 (lower is better) Translates to: SLFPFLWLLGLMISD*SQADLKLQMLLSHL Trigger: CAGATGACTCAGTAACATCTGAAGCTTCAAGTCGGCTTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR CCA 90 bp | CTAGAATCTGATTCAGATAGTTTCCCATCGCTGTTCCCATTCCTTTaGCTCTTGGGCTTGATGATTTCAGATTGCAGTCAAGCCGACTTG | + |
|
Preference number: 1 (lower is better) Translates to: LESDSDSFPSLFPFL*LLGLMISDCSQADL Trigger: CAAGTCGGCTTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAGCGATGGGAAACTATCTGAATCAGATTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATATCTGTAATGAGATCTaGCACCCTCTTCTGGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LSVPQTEAITAHRASDGDICNEI*HPLLVC Trigger: ACACACCAGAAGAGGGTGTCAGATCTCATTACAGAT...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR GCA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTGATGATTTCAGATTaGAGTCAAGCCGACTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: WRDGSAGKSTDCSSRGPELMISD*SQADLK Trigger: CTTCAAGTCGGCTTGACTGCAATCTGAAATCATCAA...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATAGCATTCCCATCTCTTaGCTGATATTTTTCCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSVPQTEAITAHRASDGDSIPIS*LIFFHQ Trigger: CTGGTGGAAAAATATCAGGCAAGAGATGGGAATGCT...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR CAA 90 bp | ATCGCTGTTCCCATTCCTTTGGCTCTTGGGCTTGATGATTTCAGATaGCAGTCAAGCCGACTTGAAGCTTCAGATGTTACTGAGTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: IAVPIPLALGLDDFR*QSSRLEASDVTESS Trigger: AGATGACTCAGTAACATCTGAAGCTTCAAGTCGGCTTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAGCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCCTGTTCCCATTCCTTTaGCTCTTGGGCTTGATGATT | + |
|
Preference number: 2 (lower is better) Translates to: TALRLESQQNPAVGTSLCLFPFL*LLGLMI Trigger: AATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAG...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCAATGCTGAACATCAATaGTTTATGCTTGCTGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TALRLESQQNPAVGTSLCNAEHQ*FMLAVS Trigger: GCTGACAGCAAGCATAAATCATTGATGTTCAGCATT...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR TCA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGATTCCCATCTCTTGCCTaGTATTTTTCCACCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GYGKLQVIISSNNPLLPGFPSLA*YFSTSH Trigger: GTGACTGGTGGAAAAATATCAGGCAAGAGATGGGAA...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCGATAAAGGGAAACACTaGGTTTATAAAGACCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TALRLESQQNPAVGTSLCDKGKH*VYKDPC Trigger: ACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATC...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCATCAGATCTAGTGACTaGAGAAAGTTCTACATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TALRLESQQNPAVGTSLCIRSSD*RKFYMS Trigger: ACTCATGTAGAACTTTCTTCAGTCACTAGATCTGAT...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR TCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTTATTCTATGATGACATaGAGTGGCAAAGGAGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LWLNKPPPCIHAMVSLSIYSMMT*SGKGGN Trigger: ATTCCCTCCTTTGCCACTTCATGTCATCATAGAATA...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR GCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTAGAAAATGCTTGCATTaGATATACAAGGCACTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LWLNKPPPCIHAMVSLSIRKCLH*IYKALG Trigger: ACCCAGTGCCTTGTATATGCAATGCAAGCATTTTCT...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR TCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTCTGAGTCATCTGTTTTaGTTAATTTTCTGGCTATGG | + |
|
Preference number: 2 (lower is better) Translates to: LWLNKPPPCIHAMVSLSILSHLF*LIFWLW Trigger: CCATAGCCAGAAAATTAATCAAAACAGATGACTCAG...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR GCA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATCAGAGTACAAGAAAATaGTTGCATTGCATATACAAG | + |
|
Preference number: 2 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHQSTRK*LHCIYK Trigger: CTTGTATATGCAATGCAAGCATTTTCTTGTACTCTG...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGGCTGTTCCCATTCCTTaGGCTCTTGGGCTTGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: WRDGSAGKSTDCSSRGPEAVPIP*ALGLDD Trigger: ATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAGC...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTGCAGTCAAGCCGACTaGAAGCTTCAGATGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: WRDGSAGKSTDCSSRGPECSQAD*KLQMLL Trigger: CAGTAACATCTGAAGCTTCAAGTCGGCTTGACTGCA...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGCTTTGGCTCTTGGGCTaGATGATTTCAGATTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WRDGSAGKSTDCSSRGPELWLLG*MISDCS Trigger: ACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAG...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTAATGAGATCTaGCACCCTCTTCTGGTGTGTCTGAAGACAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTICNEI*HPLLVCLKTAT Trigger: TGTAGCTGTCTTCAGACACACCAGAAGAGGGTGTCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATTGGCAAAGGAGGGAATaGTATTGTGATAAAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSVPQTEAITAHRASDGDWQRRE*YCDKGK Trigger: TTTCCCTTTATCACAATACAATTCCCTCCTTTGCCA...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCGAGCATTCCCATCTCTaGCCTGATATTTTTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TALRLESQQNPAVGTSLCEHSHL*PDIFPP Trigger: TGGTGGAAAAATATCAGGCAAGAGATGGGAATGCTC...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR GCA 72 bp | CCATTCCTTTGGCTCTTGGGCTTGATGATTTCAGATTaGAGTCAAGCCGACTTGAAGCTTCAGATGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: PFLWLLGLMISD*SQADLKLQMLL Trigger: CAGTAACATCTGAAGCTTCAAGTCGGCTTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR TCA 72 bp | GAACATGATAACTCTACCAGGACTCGAATAGAAAACTaGGTGTCCCTCAAACAGAAGCCATCACTGCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: EHDNSTRTRIEN*VSLKQKPSLPI Trigger: TATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAGTTTTCTATTCGAGTCCTGGTAGAGTTATCATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR GCA 72 bp | AGCCACTATCCTATTAGGCAGAGCATTCCCATCTCTTaGCTGATATTTTTCCACCAGTCACAGAAGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SHYPIRQSIPIS*LIFFHQSQKVD Trigger: ATCTACCTTCTGTGACTGGTGGAAAAATATCAGGCAAGAGATGGGAATGCTCTGCCTAATAGGATAGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR CCA 72 bp | GATTCAGATAGTTTCCCATCGCTGTTCCCATTCCTTTaGCTCTTGGGCTTGATGATTTCAGATTGCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: DSDSFPSLFPFL*LLGLMISDCSQ Trigger: TTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAGCGATGGGAAACTATCTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATATACAAGGCACTGGGTaGATGTCCAGTACTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHIQGTG*MSSTRK Trigger: TTTTCTAGTACTGGACATCAACCCAGTGCCTTGTAT...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR TCA 72 bp | AATTTCAGCATCAGACAGTTAACTCAGCACCCATTATaGAATGCCATTAAAGTTAGGATTATTGGCCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: NFSIRQLTQHPL*NAIKVRIIGLT Trigger: TGTTAGGCCAATAATCCTAACTTTAATGGCATTTCATAATGGGTGCTGAGTTAACTGTCTGATGCTGAAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR TCA 72 bp | AATCAATCAGATCTAGTGACTGAAGAAAGTTCTACATaGGTTTTGATTCCAACCCACATATTGTTCGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NQSDLVTEESST*VLIPTHILFVQ Trigger: TTGAACGAACAATATGTGGGTTGGAATCAAAACTCATGTAGAACTTTCTTCAGTCACTAGATCTGATTGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATGGTCATCCACCCCTTTaGAGGGGAACTGAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVPQTEAITAHRASDGDGHPPL*RGTEVQ Trigger: CTGGACCTCAGTTCCCCTTCAAAGGGGTGGATGACC...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGAAATTCCACATCTGCTaGAGATGGGAGCCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRDGSAGKSTDCSSRGPEKFHIC*RWEPGG Trigger: ACCCCCAGGCTCCCATCTTCAGCAGATGTGGAATTT...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATCTGAGGTCCAGATGGTaGACTGGACAGAAGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: LSVPQTEAITAHRASDGDLRSRW*TGQKDI Trigger: GATATCCTTCTGTCCAGTGCACCATCTGGACCTCAG...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGAGGTGCATTGGCTTCTaGGTAAACTTCCAAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRDGSAGKSTDCSSRGPERCIGF*VNFQKR Trigger: CCTCTTTTGGAAGTTTACCCAGAAGCCAATGCACCT...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCTTCTTCTTCTTCTaGAGGCATAGCCTACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WRDGSAGKSTDCSSRGPEFFFFF*RHSLLL Trigger: TAGCAGTAGGCTATGCCTTCAGAAGAAGAAGAAGAA...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCTCCATGAGGAGTGGCTaGCTTTCCTCCTGGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TALRLESQQNPAVGTSLCSMRSG*LSSWGC Trigger: GCAACCCCAGGAGGAAAGGCAGCCACTCCTCATGGA...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGAGCAGGAACCTCTGCCTaGAAGCTGGCCGCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GYGKLQVIISSNNPLLPGAGTSA*KLAAGT Trigger: AGTCCCTGCGGCCAGCTTTCAGGCAGAGGTTCCTGC...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTCCTGGCAGGAACCTCTaGCTGAAAGCTGGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLNKPPPCIHAMVSLSIPGRNL*LKAGRR Trigger: CCTGCGGCCAGCTTTCAGGCAGAGGTTCCTGCCAGG...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCACCCATGAAGTTGCCTaGGCACTGGCAGGTCCTATT | + |
|
Preference number: 4 (lower is better) Translates to: TALRLESQQNPAVGTSLCTHEVA*ALAGPI Trigger: AATAGGACCTGCCAGTGCTCAGGCAACTTCATGGGT...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTAGCTCCCACCAGTGCTaGCCCAAGAAGCCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLNKPPPCIHAMVSLSISSHQC*PKKPWP Trigger: TGGCCATGGCTTCTTGGGGCAGCACTGGTGGGAGCT...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCAAGCCCAGAGAGAGCTaGAGCAATAACAGCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TALRLESQQNPAVGTSLCKPRES*SNNSSH Trigger: GTGGGAGCTGTTATTGCTGCAGCTCTCTCTGGGCTT...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR CAA 72 bp | TTCCCATCGCTGTTCCCATTCCTTTGGCTCTTGGGCTaGATGATTTCAGATTGCAGTCAAGCCGACTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPSLFPFLWLLG*MISDCSQADLK Trigger: CTTCAAGTCGGCTTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAGCGATGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR CAA 72 bp | GATAGTTTCCCATCGCTGTTCCCATTCCTTTGGCTCTaGGGCTTGATGATTTCAGATTGCAGTCAAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSFPSLFPFLWL*GLMISDCSQAD Trigger: GTCGGCTTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGGGAACAGCGATGGGAAACTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATAATGTCACAGTTTTCTaGATCTCTCCAATCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSVPQTEAITAHRASDGDNVTVF*ISPIPV Trigger: TACTGGGATTGGAGAGATGCAGAAAACTGTGACATT...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATCCAAGTACTCATCTGTaGAAATGTCACAGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSVPQTEAITAHRASDGDPSTHL*KCHSFL Trigger: CAGAAAACTGTGACATTTGCACAGATGAGTACTTGG...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCGTTATGGCCGATAGGTaGATTGGCTTCTGGGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TALRLESQQNPAVGTSLCVMADR*IGFWVN Trigger: GTTTACCCAGAAGCCAATGCACCTATCGGCCATAAC...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATCCTCTGCCTGAAAGCTaGCCGCAGGGACTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHPLPES*PQGLPS Trigger: TGATGGGAGTCCCTGCGGCCAGCTTTCAGGCAGAGG...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCAACCCTGGTGCTTCATaGGCAAAATCAATGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TALRLESQQNPAVGTSLCNPGAS*AKSMSL Trigger: GAGGGACATTGATTTTGCCCATGAAGCACCAGGGTT...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATGTTTTGGCTTTGTCATaGTTTCCAGGATTACGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSVPQTEAITAHRASDGDVLALS*FPGLRN Trigger: ATTACGTAATCCTGGAAACCATGACAAAGCCAAAAC...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCCTGCTACAAATGATCTaGCAGGAGGAGAAGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TALRLESQQNPAVGTSLCLLQMI*QEEKKD Trigger: ATCCTTCTTCTCCTCCTGGCAGATCATTTGTAGCAG...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR CAA 72 bp | CCCATTCCTTTGGCTCTTGGGCTTGATGATTTCAGATaGCAGTCAAGCCGACTTGAAGCTTCAGATGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PIPLALGLDDFR*QSSRLEASDVT Trigger: AGTAACATCTGAAGCTTCAAGTCGGCTTGACTGCAATCTGAAATCATCAAGCCCAAGAGCCAAAGGAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| 3UTR CAA 72 bp | TCCACCATGTATACATGCCATGGTTTCTCTATCCATTaGTCTGTGGATAGACATCTGGGGTGTCTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: STMYTCHGFSIH*SVDRHLGCLHN Trigger: GTTGTGGAGACACCCCAGATGTCTATCCACAGACAAATGGATAGAGAAACCATGGCATGTATACATGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTCCAAGGCAGAAACCCTaGTGCTTCATGGGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LWLNKPPPCIHAMVSLSIPRQKP*CFMGKI Trigger: GATTTTGCCCATGAAGCACCAGGGTTTCTGCCTTGG...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTCCCAGTATGGAACAGTaGAGTTCTCATCCCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LWLNKPPPCIHAMVSLSIPSMEQ*SSHPQL Trigger: TAACTGGGGATGAGAACTTCACTGTTCCATACTGGG...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGAGTAAAAGCCTGGATCTaGCTCTTGGAGGTAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GYGKLQVIISSNNPLLPGVKAWI*LLEVAV Trigger: TACAGCTACCTCCAAGAGTCAGATCCAGGCTTTTAC...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATGTCCAGATGGTGCACTaGACAGAAGGATATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHVQMVH*TEGYPG Trigger: GCCAGGATATCCTTCTGTCCAGTGCACCATCTGGAC...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGAGGTGAAGAAGAAAAATaGGATCGTTGGCCGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GYGKLQVIISSNNPLLPGGEEEK*DRWPIP Trigger: AGGGATCGGCCAACGATCCCATTTTTCTTCTTCACC...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGAAAGCAGTGTGTCCCTTaGCACATAGTAATGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYGKLQVIISSNNPLLPGKQCVP*HIVMHP Trigger: TGGATGCATTACTATGTGTCAAGGGACACACTGCTT...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTGCCGATCCCTGTACTTaGGACATTGTTCCATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LWLNKPPPCIHAMVSLSIADPCT*DIVPFI Trigger: TATGAATGGAACAATGTCCCAAGTACAGGGATCGGC...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CCA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATGAAAAATGGGATCGTTaGCCGATCCCTGTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHEKWDR*PIPVLG Trigger: CCCAAGTACAGGGATCGGCCAACGATCCCATTTTTC...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGAATTAAACATGGGTGTTaGCCCATTGTTCATTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYGKLQVIISSNNPLLPGIKHGC*PIVHLA Trigger: GGCCAAATGAACAATGGGTCAACACCCATGTTTAAT...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGATCCACAAAAGCATGGTaGAGAAGAAAAATGGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: GYGKLQVIISSNNPLLPGSTKAW*RRKMGS Trigger: CGATCCCATTTTTCTTCTTCACCATGCTTTTGTGGA...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTTGGGCAGCATTCTTTTaGCAACAAGTTCTTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWLNKPPPCIHAMVSLSIWAAFF*QQVLRG Trigger: TCCTCTAAGAACTTGTTGGCAAAAGAATGCTGCCCA...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATGGGGATGACATAGACTaGGCTGATAGTATGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHGDDID*ADSMFC Trigger: GCAAAACATACTATCAGCTCAGTCTATGTCATCCCC...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR TCA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATTTGTGCATGCTACTTTaGGAAGGATCTGCTATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHLCMLL*EGSAIP Trigger: AGGGATAGCAGATCCTTCTCAAAGTAGCATGCACAA...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR GCA 90 bp | GTGATAAAGGGAAACACTGAGTTTATAAAGACCCTTGTCAGCTGTAATGAACATAACAAGAAAAGTCTGTaGCAAGGCAGAAACCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VIKGNTEFIKTLVSCNEHNKKSL*QGRNPG Trigger: ACCAGGGTTTCTGCCTTGGCACAGACTTTTCTTGTT...ATGTTCATTACAGCTGACAAGGGTCTTTATAAACTCAGTGTTTCCCTTTATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS GCA 90 bp | GTCCAGATGGTGCACTGGACAGAAGGATATCCTGGCAGGAACCTCTaGCTGAAAGCTGGCCGCAGGGACTCCCATCACCCATCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQMVHWTEGYPGRNL*LKAGRRDSHHPSMV Trigger: CACCATGGATGGGTGATGGGAGTCCCTGCGGCCAGCTTTCAGGCAGAGGTTCCTGCCAGGATATCCTTCTGTCCAGTGCACCATCTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS CCA 90 bp | GCACTGGACAGAAGGATATCCTGGCAGGAACCTCTGCCTGAAAGCTaGCCGCAGGGACTCCCATCACCCATCCATGGTGGGCAGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALDRRISWQEPLPES*PQGLPSPIHGGQHS Trigger: AGAATGCTGCCCACCATGGATGGGTGATGGGAGTCCCTGCGGCCAGCTTTCAGGCAGAGGTTCCTGCCAGGATATCCTTCTGTCCAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS TCA 90 bp | ACAGAGGGCCAGGACTCACGGTCATCCACCCCTTTGAAGGGGAACTaGGGTCCAGATGGTGCACTGGACAGAAGGATATCCTGGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TEGQDSRSSTPLKGN*GPDGALDRRISWQE Trigger: TTCCTGCCAGGATATCCTTCTGTCCAGTGCACCATCTGGACCTCAGTTCCCCTTCAAAGGGGTGGATGACCGTGAGTCCTGGCCCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS GCA 90 bp | GCCGCAGGGACTCCCATCACCCATCCATGGTGGGCAGCATTCTTTTaGCAACAAGTTCTTAGAGGAGGCACAGGCTCGAGGAAAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAGTPITHPWWAAFF*QQVLRGGTGSRKMA Trigger: GGCCATTTTCCTCGAGCCTGTGCCTCCTCTAAGAACTTGTTGGCAAAAGAATGCTGCCCACCATGGATGGGTGATGGGAGTCCCTGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS-3UTR CAA 90 bp | TGGCGAGATGGCTCAGCGGGTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTGGCAGTTCTATCCATaGATCCAGATTCATACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRDGSAGKSTDCSSRGPEWQFYP*IQIHTG Trigger: CCCAGTATGAATCTGGATCAATGGATAGAACTGCCA...CTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTACCCGCTGAGCCATCTCGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS CCA 90 bp | TCCACATCTGCTGAAGATGGGAGCCTGGGGGTTTTGGCTTTGTCATaGTTTCCAGGATTACGTAATAGTGGTCCCTCAGGTGTTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: STSAEDGSLGVLALS*FPGLRNSGPSGVPS Trigger: CGATGGAACACCTGAGGGACCACTATTACGTAATCCTGGAAACCATGACAAAGCCAAAACCCCCAGGCTCCCATCTTCAGCAGATGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CAA 90 bp | CTGAGTGTCCCTCAAACAGAAGCCATCACTGCCCATAGGGCATCAGATGGGGATATTGTGCATGCTACTTaGAGAAGGATCTGCTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSVPQTEAITAHRASDGDIVHAT*RRICYP Trigger: GGGATAGCAGATCCTTCTCAAAGTAGCATGCACAAT...ATCCCCATCTGATGCCCTATGGGCAGTGATGGCTTCTGTTTGAGGGACACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS GCA 90 bp | GTGACGACCTCCCAAGTACTCATCTGTGCAAATGTCACAGTTTTCTaGATCTCTCCAATCCCAGTATGGAACAGTGAAGTTCTCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTTSQVLICANVTVF*ISPIPVWNSEVLIP Trigger: GGGGATGAGAACTTCACTGTTCCATACTGGGATTGGAGAGATGCAGAAAACTGTGACATTTGCACAGATGAGTACTTGGGAGGTCGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 90 bp | AAATCCAAACTTACAGTTTCCGCAGTTGAAACCCATGAAGTTGCCTaGGCACTGGCAGGTCCTATTATAAAACACAGAGGGCCAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: KSKLTVSAVETHEVA*ALAGPIIKHRGPGL Trigger: GAGTCCTGGCCCTCTGTGTTTTATAATAGGACCTGCCAGTGCTCAGGCAACTTCATGGGTTTCAACTGCGGAAACTGTAAGTTTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 90 bp | GAGGAGAAGAAGGATGCTGGGCTGAGTAAGTTAGGATTTTCAGGGTaGCGACCTCCCAAGTACTCATCTGTGCAAATGTCACAGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EEKKDAGLSKLGFSG*RPPKYSSVQMSQFS Trigger: AGAAAACTGTGACATTTGCACAGATGAGTACTTGGGAGGTCGTCACCCTGAAAATCCTAACTTACTCAGCCCAGCATCCTTCTTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CAA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGATTGAAACCCATGAAGTaGCCTGAGCACTGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GYGKLQVIISSNNPLLPGLKPMK*PEHWQV Trigger: GACCTGCCAGTGCTCAGGCAACTTCATGGGTTTCAA...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCTTACAGTTTCCGCAGTaGAAACCCATGAAGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TALRLESQQNPAVGTSLCLQFPQ*KPMKLP Trigger: AGGCAACTTCATGGGTTTCAACTGCGGAAACTGTAA...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 90 bp | ATCAATGTCCCTCCATATTTCAGAGCCCCCAAGCAGTGTGTCCCTTaGCACATAGTAATGCATCCATACAAAGAGGTCGTAGATGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: INVPPYFRAPKQCVP*HIVMHPYKEVVDVD Trigger: ATCAACATCTACGACCTCTTTGTATGGATGCATTACTATGTGTCAAGGGACACACTGCTTGGGGGCTCTGAAATATGGAGGGACATTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS TCA 90 bp | CCATACAAAGAGGTCGTAGATGTTGATATCATTAAACATGGGTGTTaGCCCATTGTTCATTTGGCCATAGGTGCGGTCATCCACCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PYKEVVDVDIIKHGC*PIVHLAIGAVIHPF Trigger: AAAGGGGTGGATGACCGCACCTATGGCCAAATGAACAATGGGTCAACACCCATGTTTAATGATATCAACATCTACGACCTCTTTGTATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207834.2 |
||
| CDS-3UTR CAA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGAGGCCGATCCCTGTACTaGGGACATTGTTCCATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GYGKLQVIISSNNPLLPGGRSLY*GHCSIH Trigger: ATGAATGGAACAATGTCCCAAGTACAGGGATCGGCC...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CAA 90 bp | GGCTATGGTAAACTTCAGGTAATAATCTCTAGTAATAACCCACTCCTTCCAGGAAGAAAAATGGGATCGTaGGCCGATCCCTGTACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GYGKLQVIISSNNPLLPGRKMGS*ADPCTW Trigger: CCAAGTACAGGGATCGGCCAACGATCCCATTTTTCT...TCCTGGAAGGAGTGGGTTATTACTAGAGATTATTACCTGAAGTTTACCATAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CAA 90 bp | TTATGGCTGAACAAACCTCCACCATGTATACATGCCATGGTTTCTCTATCCATTCTGGGGGTTTTGGCTTaGTCATGGTTTCCAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: LWLNKPPPCIHAMVSLSILGVLA*SWFPGL Trigger: TAATCCTGGAAACCATGACAAAGCCAAAACCCCCAG...AATGGATAGAGAAACCATGGCATGTATACATGGTGGAGGTTTGTTCAGCCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 90 bp | ATTGTTCCATTCATAAAGATATGTAAGGCATTGTGCATGCTACTTTaGGAAGGATCTGCTATCCCTGTGAGTGGACTGGCAAATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVPFIKICKALCMLL*EGSAIPVSGLANPS Trigger: GGAAGGATTTGCCAGTCCACTCACAGGGATAGCAGATCCTTCTCAAAGTAGCATGCACAATGCCTTACATATCTTTATGAATGGAACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTGAGACTGGAAAGCCAACAAAATCCAGCAGTAGGAACCAGTTTATGCTCATATCCCAGATCCTaGGATGTTATGAAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: TALRLESQQNPAVGTSLCSYPRS*DVMKKS Trigger: TGATTTCTTCATAACATCCAAGGATCTGGGATATGA...GCATAAACTGGTTCCTACTGCTGGATTTTGTTGGCTTTCCAGTCTCAGAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 90 bp | TTGTTCCAAGTAAGGCTCAATATAATTTCTGTAAAAGCCTGGATCTaGCTCTTGGAGGTAGCTGTAGTCATATCCCAGATCCTTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LFQVRLNIISVKAWI*LLEVAVVISQILGC Trigger: ACATCCAAGGATCTGGGATATGACTACAGCTACCTCCAAGAGTCAGATCCAGGCTTTTACAGAAATTATATTGAGCCTTACTTGGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 90 bp | TCCTTCCAGTGTGTTTCTAAAGCTGAAATTGGCAGTTCTATCCATTaGTCCAGATTCATACTGGGTCAAACTCAGACAAAATTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: SFQCVSKAEIGSSIH*SRFILGQTQTKFHI Trigger: GATGTGGAATTTTGTCTGAGTTTGACCCAGTATGAATCTGGATCAATGGATAGAACTGCCAATTTCAGCTTTAGAAACACACTGGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS CCA 90 bp | ATCAAAAATGTTTCTTCTAATCAAGACTCGCTTCTCTGTACAATTTaGGCCCCCAAATCCAAACTTACAGTTTCCGCAGTTGAAACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IKNVSSNQDSLLCTI*APKSKLTVSAVETH Trigger: ATGGGTTTCAACTGCGGAAACTGTAAGTTTGGATTTGGGGGCCCAAATTGTACAGAGAAGCGAGTCTTGATTAGAAGAAACATTTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS GCA 72 bp | GTGCACTGGACAGAAGGATATCCTGGCAGGAACCTCTaGCTGAAAGCTGGCCGCAGGGACTCCCATCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: VHWTEGYPGRNL*LKAGRRDSHHP Trigger: TGGGTGATGGGAGTCCCTGCGGCCAGCTTTCAGGCAGAGGTTCCTGCCAGGATATCCTTCTGTCCAGTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS TCA 72 bp | ACACAGAGGGCCAGGACTCACGGTCATCCACCCCTTTaGAGGGGAACTGAGGTCCAGATGGTGCACTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TQRARTHGHPPL*RGTEVQMVHWT Trigger: TGTCCAGTGCACCATCTGGACCTCAGTTCCCCTTCAAAGGGGTGGATGACCGTGAGTCCTGGCCCTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS GCA 72 bp | AGAGAGAGCTGCAGCAATAACAGCTCCCACCAGTGCTaGCCCAAGAAGCCATGGCCAGATACGACTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RESCSNNSSHQC*PKKPWPDTTGL Trigger: CAAGCCAGTCGTATCTGGCCATGGCTTCTTGGGGCAGCACTGGTGGGAGCTGTTATTGCTGCAGCTCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | CAGGACTCACGGTCATCCACCCCTTTGAAGGGGAACTaGGGTCCAGATGGTGCACTGGACAGAAGGATATCC | + |
|
Preference number: 6 (lower is better) Translates to: QDSRSSTPLKGN*GPDGALDRRIS Trigger: GGATATCCTTCTGTCCAGTGCACCATCTGGACCTCAGTTCCCCTTCAAAGGGGTGGATGACCGTGAGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | TGTTCATTTGGCCATAGGTGCGGTCATCCACCCCTTTaGAGGGGAACTGAGGTCCAGATGGTGCACTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: CSFGHRCGHPPL*RGTEVQMVHWT Trigger: TGTCCAGTGCACCATCTGGACCTCAGTTCCCCTTCAAAGGGGTGGATGACCGCACCTATGGCCAAATGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207834.2 |
||
| CDS GCA 72 bp | ACTCCCATCACCCATCCATGGTGGGCAGCATTCTTTTaGCAACAAGTTCTTAGAGGAGGCACAGGCTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPITHPWWAAFF*QQVLRGGTGSR Trigger: CCTCGAGCCTGTGCCTCCTCTAAGAACTTGTTGGCAAAAGAATGCTGCCCACCATGGATGGGTGATGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS GCA 72 bp | ATCCACCCCTTTGAAGGGGAACTGAGGTCCAGATGGTaGACTGGACAGAAGGATATCCTGGCAGGAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IHPFEGELRSRW*TGQKDILAGTS Trigger: AGAGGTTCCTGCCAGGATATCCTTCTGTCCAGTGCACCATCTGGACCTCAGTTCCCCTTCAAAGGGGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS CCA 72 bp | AAGCTGGCCGCAGGGACTCCCATCACCCATCCATGGTaGGCAGCATTCTTTTGCCAACAAGTTCTTAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KLAAGTPITHPW*AAFFCQQVLRG Trigger: TCCTCTAAGAACTTGTTGGCAAAAGAATGCTGCCCACCATGGATGGGTGATGGGAGTCCCTGCGGCCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS TCA 72 bp | CTTTCCTCCTGGGGTTGCTTCTTCTTCTTCTTCTTCTaGAGGCATAGCCTACTGCTAAGCCCAGAGAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSWGCFFFFFF*RHSLLLSPERA Trigger: AGCTCTCTCTGGGCTTAGCAGTAGGCTATGCCTTCAGAAGAAGAAGAAGAAGAAGCAACCCCAGGAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS CCA 72 bp | AACAAGTTCTTAGAGGAGGCACAGGCTCGAGGAAAATaGCCATCAGAGATCTGGAAACTCCACAGAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NKFLEEAQARGK*PSEIWKLHRRQ Trigger: TTGCCTTCTGTGGAGTTTCCAGATCTCTGATGGCCATTTTCCTCGAGCCTGTGCCTCCTCTAAGAACTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS CCA 72 bp | AAAAGTCTGTGCCAAGGCAGAAACCCTGGTGCTTCATaGGCAAAATCAATGTCCCTCCATATTTCAGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KSLCQGRNPGAS*AKSMSLHISEP Trigger: GGGCTCTGAAATATGGAGGGACATTGATTTTGCCCATGAAGCACCAGGGTTTCTGCCTTGGCACAGACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS CAA 72 bp | CCCTCCATATTTCAGAGCCCCCAAGCAGTGTGTCCCTaGACACATAGTAATGCATCCATACAAAGAGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PSIFQSPQAVCP*THSNASIQRGR Trigger: ACGACCTCTTTGTATGGATGCATTACTATGTGTCAAGGGACACACTGCTTGGGGGCTCTGAAATATGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS TCA 72 bp | CTTACAGTTTCCGCAGTTGAAACCCATGAAGTTGCCTaGGCACTGGCAGGTCCTATTATAAAACACAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTVSAVETHEVA*ALAGPIIKHRG Trigger: CCCTCTGTGTTTTATAATAGGACCTGCCAGTGCTCAGGCAACTTCATGGGTTTCAACTGCGGAAACTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | CCTCCATATTTCAGAGCCCCCAAGCAGTGTGTCCCTTaGCACATAGTAATGCATCCATACAAAGAGGTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: PPYFRAPKQCVP*HIVMHPYKEVV Trigger: TACGACCTCTTTGTATGGATGCATTACTATGTGTCAAGGGACACACTGCTTGGGGGCTCTGAAATATGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS TCA 72 bp | AAGGATGCTGGGCTGAGTAAGTTAGGATTTTCAGGGTaGCGACCTCCCAAGTACTCATCTGTGCAAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: KDAGLSKLGFSG*RPPKYSSVQMS Trigger: TGACATTTGCACAGATGAGTACTTGGGAGGTCGTCACCCTGAAAATCCTAACTTACTCAGCCCAGCATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | GAGGTCGTAGATGTTGATATCATTAAACATGGGTGTTaGCCCATTGTTCATTTGGCCATAGGTGCCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVVDVDIIKHGC*PIVHLAIGACG Trigger: CCCACAGGCACCTATGGCCAAATGAACAATGGGTCAACACCCATGTTTAATGATATCAACATCTACGACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS GCA 72 bp | TGGCTATTATACTCTTCTGATCTGCTACAAATGATCTaGCAGGAGGAGAAGAAGGATGCTGGGCTGAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: WLLYSSDLLQMI*QEEKKDAGLSK Trigger: CTTACTCAGCCCAGCATCCTTCTTCTCCTCCTGGCAGATCATTTGTAGCAGATCAGAAGAGTATAATAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS CCA 72 bp | CATGCTACTTTGAGAAGGATCTGCTATCCCTGTGAGTaGACTGGCAAATCCTTCCAGTGTGTTTCTAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HATLRRICYPCE*TGKSFQCVSKA Trigger: AGCTTTAGAAACACACTGGAAGGATTTGCCAGTCCACTCACAGGGATAGCAGATCCTTCTCAAAGTAGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS CCA 72 bp | CCACAAAAGCATGGTGAAGAAGAAAAATGGGATCGTTaGCCGATCCCTGTACTTGGGACATTGTTCCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: PQKHGEEEKWDR*PIPVLGTLFHS Trigger: TGAATGGAACAATGTCCCAAGTACAGGGATCGGCCAACGATCCCATTTTTCTTCTTCACCATGCTTTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | GAGGTCGTAGATGTTGATATCATTAAACATGGGTGTTaGCCCATTGTTCATTTGGCCATAGGTGCGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: EVVDVDIIKHGC*PIVHLAIGAVI Trigger: GATGACCGCACCTATGGCCAAATGAACAATGGGTCAACACCCATGTTTAATGATATCAACATCTACGACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207834.2 |
||
| CDS GCA 72 bp | CGAATTTCTTGTTCCCACAATAACAAGAAAAGTCTGTaGCAAGGCAGAAACCCTGGTGCTTCATGGGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RISCSHNNKKSL*QGRNPGASWAK Trigger: TTTTGCCCATGAAGCACCAGGGTTTCTGCCTTGGCACAGACTTTTCTTGTTATTGTGGGAACAAGAAATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004770.7 ENSMUST00000207834.2 |
||
| CDS CAA 90 bp | GTGAGTGGACTGGCAAATCCTTCCAGTGTGTTTCTAAAGCTGAAATaGGCAGTTCTATCCATTGATCCAGATTCATACTGGGTCAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: VSGLANPSSVFLKLK*AVLSIDPDSYWVKL Trigger: GAGTTTGACCCAGTATGAATCTGGATCAATGGATAGAACTGCCAATTTCAGCTTTAGAAACACACTGGAAGGATTTGCCAGTCCACTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | TTCATAAAGATATGTAAGGCATTGTGCATGCTACTTTaGGAAGGATCTGCTATCCCTGTGAGTGGACTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FIKICKALCMLL*EGSAIPVSGLA Trigger: TGCCAGTCCACTCACAGGGATAGCAGATCCTTCTCAAAGTAGCATGCACAATGCCTTACATATCTTTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS GCA 72 bp | TCCCAAGTACTCATCTGTGCAAATGTCACAGTTTTCTaGATCTCTCCAATCCCAGTATGGAACAGTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQVLICANVTVF*ISPIPVWNSEV Trigger: AACTTCACTGTTCCATACTGGGATTGGAGAGATGCAGAAAACTGTGACATTTGCACAGATGAGTACTTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | AGTTTTCTGCATCTCTCCAATCCCAGTATGGAACAGTaGAGTTCTCATCCCCAGTTAGTTCTCGAATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFLHLSNPSMEQ*SSHPQLVLEFL Trigger: AAGAAATTCGAGAACTAACTGGGGATGAGAACTTCACTGTTCCATACTGGGATTGGAGAGATGCAGAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS CAA 72 bp | CTGGCAAATCCTTCCAGTGTGTTTCTAAAGCTGAAATaGGCAGTTCTATCCATTGATCCAGATTCATACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LANPSSVFLKLK*AVLSIDPDSYW Trigger: CCAGTATGAATCTGGATCAATGGATAGAACTGCCAATTTCAGCTTTAGAAACACACTGGAAGGATTTGCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||
| CDS TCA 72 bp | TGTGTTTCTAAAGCTGAAATTGGCAGTTCTATCCATTaGTCCAGATTCATACTGGGTCAAACTCAGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: CVSKAEIGSSIH*SRFILGQTQTK Trigger: TTTTGTCTGAGTTTGACCCAGTATGAATCTGGATCAATGGATAGAACTGCCAATTTCAGCTTTAGAAACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004770.7 |
||