Pregenerated sensors for TYMS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025747Ensembl transcript IDs: ENSMUST00000026846.11, ENSMUST00000141630.8, ENSMUST00000146520.5, ENSMUST00000196095.5, ENSMUST00000196872.2, ENSMUST00000198095.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTCTTTCAGCCCTGGCCTGCCACTCAGGTGTACCCTGTCCATGTaGGCCATGAGCTGGCTCACAACAAGTTACTGCATGGGGTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LSFSPGLPLRCTLSM*AMSWLTTSYCMGSS Trigger: GGAGGACCCCATGCAGTAACTTGTTGTGAGCCAGCTCATGGCTCACATGGACAGGGTACACCTGAGTGGCAGGCCAGGGCTGAAAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR GCA 90 bp | TGTGTTGGGTCCTTGAGTAACTGTGAGGGCTCCTCCTTGAGGGACTaGATGGGGTCCTCCATGAGGGACTGTGAGGGCTCATCCTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: CVGSLSNCEGSSLRD*MGSSMRDCEGSSLK Trigger: CTTCAAGGATGAGCCCTCACAGTCCCTCATGGAGGACCCCATGCAGTCCCTCAAGGAGGAGCCCTCACAGTTACTCAAGGACCCAACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR CCA 90 bp | GCTCCATTTTTCTCTCGACCACCTAGTTCCCCTCTCTTTCAGCCCTaGCCTGCCACTCAGGTGTACCCTGTCCATGTGAGCCATGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: APFFSRPPSSPLFQP*PATQVYPVHVSHEL Trigger: CAGCTCATGGCTCACATGGACAGGGTACACCTGAGTGGCAGGCCAGGGCTGAAAGAGAGGGGAACTAGGTGGTCGAGAGAAAAATGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR CCA 90 bp | TGCTCAGCCACTGCCACTGTTCCCCTTCAAGATGCTGCTACCTGCTaGGAGGCTGCTGAGCTATTCTGGAACTTCACCCTATCCTGCACG | + |
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Preference number: 1 (lower is better) Translates to: CSATATVPLQDAATC*EAAELFWNFTLSCT Trigger: CGTGCAGGATAGGGTGAAGTTCCAGAATAGCTCAGCAGCCTCCCAGCAGGTAGCAGCATCTTGAAGGGGAACAGTGGCAGTGGCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR CCA 90 bp | AGGGACTGTGAGGGCTCATACTTGAAGGACTTCGAGGGTTCCTTCTaGAAGGACTGGGTGGACTTCTCCTTGATGTGCTGTGTGGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: RDCEGSYLKDFEGSF*KDWVDFSLMCCVGC Trigger: GCACCCCACACAGCACATCAAGGAGAAGTCCACCCAGTCCTTCCAGAAGGAACCCTCGAAGTCCTTCAAGTATGAGCCCTCACAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR GCA 90 bp | GGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATaGCCCAGTACAAGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GHHWKERPIGLANFI*PSTRECQGQEVGVG Trigger: ACCCACTCCCACTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR TCA 90 bp | AGCATAGCTGGCAATGTTGAAGGGCACGCCCAGACCCATATCTCCTaGCCTCTGGTAAAGCTGGCAAGACAGTTCCCCATTCACCACATA | + |
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Preference number: 1 (lower is better) Translates to: SIAGNVEGHAQTHIS*PLVKLARQFPIHHI Trigger: TATGTGGTGAATGGGGAACTGTCTTGCCAGCTTTACCAGAGGTCAGGAGATATGGGTCTGGGCGTGCCCTTCAACATTGCCAGCTATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141630.8 ENSMUST00000146520.5 ENSMUST00000196095.5 |
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| 3UTR GCA 90 bp | GTTGCTTTTCACTGTCTCCACTTTGTTTTTCAAGCAGGTCAGTCCTaGCCTTCATCCTTACTGCAGCAGGTGTGCACCCTCACCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: VAFHCLHFVFQAGQS*PSSLLQQVCTLTSN Trigger: GTTGGAGGTGAGGGTGCACACCTGCTGCAGTAAGGATGAAGGGCAGGACTGACCTGCTTGAAAAACAAAGTGGAGACAGTGAAAAGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| 3UTR CCA 90 bp | TACTCTTGGAGGTGTACACAGAAGTGGATGCTCACTGTCAGCTATTaGATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACC | + |
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Preference number: 1 (lower is better) Translates to: YSWRCTQKWMLTVSY*MDHRAPNGGAREST Trigger: GGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR GCA 90 bp | TATAAAAAGAAAGGGGGAGAATGCTACACACACTACAGTGAAGTTTaGTTGGCAGGCAGAGGTGCCTGGGAGCACTCACGAGGCAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: YKKKGGECYTHYSEV*LAGRGAWEHSRGRV Trigger: AACTCTGCCTCGTGAGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGCATTCTCCCCCTTTCTTTTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR GCA 90 bp | TCCCAAAGTGTGGACAAAATCACCTGGCTGCAGGCCTGTGATATGTaGAATCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: SQSVDKITWLQACDM*NHVGEQSIAGNVEG Trigger: CCCTTCAACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGCCTGCAGCCAGGTGATTTTGTCCACACTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196095.5 |
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| 3UTR CCA 90 bp | ATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTaGACTTGCAAACTTTATATGCCCCAGTACAAGGGAATGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: IKRWPSRPSLEREAH*TCKLYMPQYKGMPG Trigger: CCCTGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR CCA 90 bp | TCCATGAGTGACTGTAATGGCTACTCTTGGAGGTGTACACAGAAGTaGATGCTCACTGTCAGCTATTGGATGGATCACAGGGCCCCCAAT | + |
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Preference number: 1 (lower is better) Translates to: SMSDCNGYSWRCTQK*MLTVSYWMDHRAPN Trigger: ATTGGGGGCCCTGTGATCCATCCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATTACAGTCACTCATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR TCA 90 bp | CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATaGACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGT | + |
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Preference number: 1 (lower is better) Translates to: QGAKGICNPIGGTTL*TNQYPGALDSSCIC Trigger: ACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR CCA 90 bp | AAGTACTTCGTACGCTACTCCATGAGTGACTGTAATGGCTACTCTTaGAGGTGTACACAGAAGTGGATGCTCACTGTCAGCTATTGGATG | + |
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Preference number: 1 (lower is better) Translates to: KYFVRYSMSDCNGYS*RCTQKWMLTVSYWM Trigger: CATCCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATTACAGTCACTCATGGAGTAGCGTACGAAGTACTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR GCA 90 bp | TCTGACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCTAGAAAATaGTTGAAGCCGAGGAGCTTGGAAGAGACAATGAAACTAATTAGG | + |
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Preference number: 1 (lower is better) Translates to: SDIAKPWPLFQCPRK*LKPRSLEETMKLIR Trigger: CCTAATTAGTTTCATTGTCTCTTCCAAGCTCCTCGGCTTCAAGCATTTTCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR CCA 90 bp | TATTATAAGTGCCTTTTAAGATTGAATTCTGACATAGCTAAGCCTTaGCCACTGTTCCAATGTCCTAGAAAATGCTTGAAGCCGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: YYKCLLRLNSDIAKP*PLFQCPRKCLKPRS Trigger: GCTCCTCGGCTTCAAGCATTTTCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR GCA 90 bp | GTGTATGGCTCCACGTGCTCTCTTTTAGTATTATCTTATTATAAGTaGCTTTTAAGATTGAATTCTGACATAGCTAAGCCTTGGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: VYGSTCSLLVLSYYK*LLRLNSDIAKPWPL Trigger: CAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTATAATAAGATAATACTAAAAGAGAGCACGTGGAGCCATACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR CCA 90 bp | GCTACACACACTACAGTGAAGTTTGCTTGGCAGGCAGAGGTGCCTGGGAGCACTGATGCTGCTACCTGCTaGGAGGCTGCTGAGCTATTC | + |
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Preference number: 2 (lower is better) Translates to: ATHTTVKFAWQAEVPGSTDAATC*EAAELF Trigger: GAATAGCTCAGCAGCCTCCCAGCAGGTAGCAGCATC...AGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | GCTACACACACTACAGTGAAGTTTGCTTGGCAGGCAGAGGTGCCTGGGAGCACTCTCCATGAGGGACTGTaGGGGCTCATACTTGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ATHTTVKFAWQAEVPGSTLHEGL*GLILEG Trigger: TCCTTCAAGTATGAGCCCTCACAGTCCCTCATGGAG...AGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGAAGGACTTCGAGGGTTCTGCCTTGAGGGACTGCAAGTGCTTCTACCTGCTCACTGTCAGCTATTaGATGGATCACAGGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: SLKDFEGSALRDCKCFYLLTVSY*MDHRAP Trigger: GGGGGCCCTGTGATCCATCCAATAGCTGACAGTGAG...CAGGTAGAAGCACTTGCAGTCCCTCAAGGCAGAACCCTCGAAGTCCTTCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR CAA 90 bp | TTGAGGAACTACAAAGACTTCTCCTTGATGGGCTGTGTTGGGTCCTaGAGTAACTGTGAGGGCTCCTCCTTGAGGGACTGCATGGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LRNYKDFSLMGCVGS*SNCEGSSLRDCMGS Trigger: GGACCCCATGCAGTCCCTCAAGGAGGAGCCCTCACAGTTACTCAAGGACCCAACACAGCCCATCAAGGAGAAGTCTTTGTAGTTCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGCTACTCTTGGAGGTGTACACAGAAGTGGATGCTCACTGTCAGCTATTGGGCATGGGGTCCTCCATaGGGGACTGTGAGGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: NGYSWRCTQKWMLTVSYWAWGPP*GTVRAH Trigger: ATGAGCCCTCACAGTCCCTCATGGAGGACCCCATGC...CCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGCTCCATTTTTCTCTCGACCACCTAGTTCCCCTCTCTTTCAGCCCTGGCCTCCCAGTACAAGGGAATaGCAGGGCCAAGAAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LAPFFSRPPSSPLFQPWPPSTRE*QGQEVG Trigger: TCCCACTTCTTGGCCCTGGCATTCCCTTGTACTGGG...AGGCCAGGGCTGAAAGAGAGGGGAACTAGGTGGTCGAGAGAAAAATGGAGCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTCCCCATTCACCACATAGAACTGACAGAGGGCATGGCAAGGAGGCAGTGTTGGAAACCATAAACTaGGCCCAGGTCCCCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TVPHSPHRTDRGHGKEAVLETIN*AQVPFL Trigger: CAGGAAGGGGACCTGGGCCCAGTTTATGGTTTCCAA...CACTGCCTCCTTGCCATGCCCTCTGTCAGTTCTATGTGGTGAATGGGGAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000146520.5 |
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| 3UTR-3UTR TCA 90 bp | GACTGTGAGGGCTCATCCTTGAAGGACTTAGAGGGTTCCTCCTTGAACGACTGCCTCTATGAGGGAATGTaGGGGCTCATCCTTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: DCEGSSLKDLEGSSLNDCLYEGM*GLILEG Trigger: TCCTTCAAGGATGAGCCCTCACATTCCCTCATAGAG...GCAGTCGTTCAAGGAGGAACCCTCTAAGTCCTTCAAGGATGAGCCCTCACAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCCCCAGTACAAGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGCTTGCAAACTTTATATaGCCCAGTACAAGGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: YAPVQGNARAKKWEWVGRLANFI*PSTREC Trigger: GCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAG...CCTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR GCA 90 bp | GACTGTGAGGGCTCATCCTTGAAGGACTTAGAGGGTTCCTCCTTGAACGACTGCATGGCAAGGAGGCAGTaGCATCAGGGGAAGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: DCEGSSLKDLEGSSLNDCMARRQ*HQGKIF Trigger: AAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCAT...GCAGTCGTTCAAGGAGGAACCCTCTAAGTCCTTCAAGGATGAGCCCTCACAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGTTTTTCAAGCAGGTCAGTCCTGCCCTTCATCCTTACTGCAGCAGGTGTCCCAGTACAAGGGAATaGCAGGGCCAAGAAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TLFFKQVSPALHPYCSRCPSTRE*QGQEVG Trigger: TCCCACTTCTTGGCCCTGGCATTCCCTTGTACTGGG...ACACCTGCTGCAGTAAGGATGAAGGGCAGGACTGACCTGCTTGAAAAACAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACCTTGCAAACTTTATATaGCCCAGTACAAGGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: AWQGGSAIRGRSFGFQAHLANFI*PSTREC Trigger: GCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAG...GTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTCCCCATTCACCACATAGAACTGACAGAGGGCATGGCAAGGAGGCAGTGATCACTTTTTGCAGCTaGTCTACTCCTTGTCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: TVPHSPHRTDRGHGKEAVITFCS*STPCPE Trigger: CTCGGGACAAGGAGTAGACCAGCTGCAAAAAGTGAT...CACTGCCTCCTTGCCATGCCCTCTGTCAGTTCTATGTGGTGAATGGGGAACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000146520.5 |
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| 3UTR-3UTR CCA 90 bp | GGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTAGGGCCTCTCTTTCAGCCCTaGCCTGCCACTCAGGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: GIHHGLANRWVYNEKKLGPLFQP*PATQVY Trigger: GTACACCTGAGTGGCAGGCCAGGGCTGAAAGAGAGG...CCCTAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACTGTGAGGGCTCATCCTGAAGGACTTTGTGGGTTCCACATTGAGGAACTATCGTACGCTACTCCATaGGTGACTGTAATGGCTACT | + |
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Preference number: 2 (lower is better) Translates to: GTVRAHPEGLCGFHIEELSYATP*VTVMAT Trigger: AGTAGCCATTACAGTCACTCATGGAGTAGCGTACGA...TAGTTCCTCAATGTGGAACCCACAAAGTCCTTCAGGATGAGCCCTCACAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGCCTGTGATATGTGCAATCATGTAGGTGAGCAGAGCATAGCTGGCAATATCACTTTTTGCAGCTaGTCTACTCCTTGTCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LQACDMCNHVGEQSIAGNITFCS*STPCPE Trigger: CTCGGGACAAGGAGTAGACCAGCTGCAAAAAGTGAT...ATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGCCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000146520.5 |
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| 3UTR-3UTR CCA 90 bp | TCCATGAGGGACTGTGAGGGCTCATACTTGAAGGACTTCGAGGGTTCCTTCTGGAAGGATTTTGAGCTTTaGGAAAGGTCTTGGTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: SMRDCEGSYLKDFEGSFWKDFEL*ERSWFS Trigger: CGAGAACCAAGACCTTTCCCAAAGCTCAAAATCCTT...CCAGAAGGAACCCTCGAAGTCCTTCAAGTATGAGCCCTCACAGTCCCTCATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACTCCTGAATATAAAAAGAAAGGGGGAGAATGCTACACACACTACAGTGCTCCATGAGGGACTGTaGGGGCTCATCCTTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RALLNIKRKGENATHTTVLHEGL*GLILEG Trigger: TCCTTCAAGGATGAGCCCTCACAGTCCCTCATGGAG...CACTGTAGTGTGTGTAGCATTCTCCCCCTTTCTTTTTATATTCAGGAGTGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | GCTACACACACTACAGTGAAGTTTGCTTGGCAGGCAGAGGTGCCTGGGAGCACTGTGCCATTAAACATTTaGGCTTTGATCAGGAATCTT | + |
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Preference number: 2 (lower is better) Translates to: ATHTTVKFAWQAEVPGSTVPLNI*ALIRNL Trigger: AAGATTCCTGATCAAAGCTCAAATGTTTAATGGCAC...AGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGAGGGACTGCATAGAATCCTCTATGAGGGAATGTGAGGGCTCATCCTTGTTGTGGGTTCCACATTaGGGAACTACAAAGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLRDCIESSMRECEGSSLLWVPH*GTTKTS Trigger: AGAAGTCTTTGTAGTTCCTCAATGTGGAACCCACAA...CAAGGATGAGCCCTCACATTCCCTCATAGAGGATTCTATGCAGTCCCTCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTTATTTAATATTAATAACGGAGGAAATTGTAACCTCCCCCAGCCTGAAGCAGGGTGGACTTCTCCTTaGTGTGCTGTGTGGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SLFNINNGGNCNLPQPEAGWTSP*CAVWGA Trigger: AGCACCCCACACAGCACATCAAGGAGAAGTCCACCC...TGCTTCAGGCTGGGGGAGGTTACAATTTCCTCCGTTATTAATATTAAATAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTCTAAGTCTAAGCATGACCATTGCTAATTTGCAATTGAATGGAGTACCTCTCACTGTCAGCTATTaGATGGATCACAGGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GALSLSMTIANLQLNGVPLTVSY*MDHRAP Trigger: GGGGGCCCTGTGATCCATCCAATAGCTGACAGTGAG...AGGTACTCCATTCAATTGCAAATTAGCAATGGTCATGCTTAGACTTAGAGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTATACTCCTCCATGAGGGACTGTaGGGGCTCATCCTTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FSQKLTSWNFSVLITCILLHEGL*GLILEG Trigger: TCCTTCAAGGATGAGCCCTCACAGTCCCTCATGGAG...GAGTATACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATGAGGGACTGTGAGGGCTCATACTTGAAGGACTTCGAGGGTTCCTTCTGGTTTAATCGTTGGATGTaGATTATACCCTTCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: SMRDCEGSYLKDFEGSFWFNRWM*IIPFNL Trigger: CAGATTGAAGGGTATAATCCACATCCAACGATTAAA...CCAGAAGGAACCCTCGAAGTCCTTCAAGTATGAGCCCTCACAGTCCCTCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| 3UTR CAA 90 bp | GACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCTAGAAAATGCTaGAAGCCGAGGAGCTTGGAAGAGACAATGAAACTAATTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: DIAKPWPLFQCPRKC*KPRSLEETMKLIRH Trigger: ATGCCTAATTAGTTTCATTGTCTCTTCCAAGCTCCTCGGCTTCAAGCATTTTCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAATCTTGACTTAGCTCCATTTTTCTCTCGACCACCTAGTTCCCCTCTCTTTCTTTTCGAAGGATTTTaGGCTTTGGGAAAGGTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RNLDLAPFFSRPPSSPLFLFEGF*ALGKVL Trigger: CAAGACCTTTCCCAAAGCTCAAAATCCTTCGAAAAG...AAAGAGAGGGGAACTAGGTGGTCGAGAGAAAAATGGAGCTAAGTCAAGATTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTATTTAATATTAATAACGGAGGAAATTGTAACCTCCCCCAGCCTGAAGCACAGGCCTGTGATATGTaGAATCATGTAGGTGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLFNINNGGNCNLPQPEAQACDM*NHVGEQ Trigger: CTGCTCACCTACATGATTGCACATATCACAGGCCTG...TGCTTCAGGCTGGGGGAGGTTACAATTTCCTCCGTTATTAATATTAAATAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGATTGAATTCTGACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCTAGATTGTGGGTTCCACATTaGGGAACTACAAAGACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LRLNSDIAKPWPLFQCPRLWVPH*GTTKTS Trigger: AGAAGTCTTTGTAGTTCCTCAATGTGGAACCCACAA...TCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGATTGAATTCTGACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCTAGAGGCCTAGCGAATAGGTaGGTTTACAATGAGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LRLNSDIAKPWPLFQCPRGLANR*VYNEKK Trigger: CTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCC...TCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTAGTGCCATTAAACATTTaGGCTTTGATCAGGAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: KGIHHGLANRWVYNEKKLVPLNI*ALIRNL Trigger: AAGATTCCTGATCAAAGCTCAAATGTTTAATGGCAC...TAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTCTAAGTCTAAGCATGACCATTGCTAATTTGCAATTGAATGGAGTACCTTTAGCAAAAGTCACTTaGACACTTGGAACATTGATG | + |
|
Preference number: 2 (lower is better) Translates to: GALSLSMTIANLQLNGVPLAKVT*TLGTLM Trigger: CATCAATGTTCCAAGTGTCCAAGTGACTTTTGCTAA...AGGTACTCCATTCAATTGCAAATTAGCAATGGTCATGCTTAGACTTAGAGCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR CAA 90 bp | ACGTGCTCTCTTTTAGTATTATCTTATTATAAGTGCCTTTTAAGATaGAATTCTGACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TCSLLVLSYYKCLLR*NSDIAKPWPLFQCP Trigger: AGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTATAATAAGATAATACTAAAAGAGAGCACGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACCTAGTTCCCCTCTCTTTCAGCCCTGGCCTGCCACTCAGGTGTACCCTGTCTGTGAGGGCTCCTCCTaGAGGGACTGCATGGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPSSPLFQPWPATQVYPVCEGSS*RDCMGS Trigger: GGACCCCATGCAGTCCCTCAAGGAGGAGCCCTCACA...GACAGGGTACACCTGAGTGGCAGGCCAGGGCTGAAAGAGAGGGGAACTAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CCA 72 bp | TTCTCTCGACCACCTAGTTCCCCTCTCTTTCAGCCCTaGCCTGCCACTCAGGTGTACCCTGTCCATGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FSRPPSSPLFQP*PATQVYPVHVS Trigger: GCTCACATGGACAGGGTACACCTGAGTGGCAGGCCAGGGCTGAAAGAGAGGGGAACTAGGTGGTCGAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | GGTCAGTCCTGCCCTTCATCCTTACTGCAGCAGGTGTaGACCCTCACCTCCAACAGCACAGGTGGCAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GQSCPSSLLQQV*TLTSNSTGGSY Trigger: ATAACTGCCACCTGTGCTGTTGGAGGTGAGGGTGCACACCTGCTGCAGTAAGGATGAAGGGCAGGACTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR CCA 72 bp | GGGGAGAATGCTACACACACTACAGTGAAGTTTGCTTaGCAGGCAGAGGTGCCTGGGAGCACTCACGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GENATHTTVKFA*QAEVPGSTHEA Trigger: TGCCTCGTGAGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGCATTCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR TCA 72 bp | TCCCCTTCAAGATGCTGCTACCTGCTGGGAGGCTGCTaGGCTATTCTGGAACTTCACCCTATCCTGCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPSRCCYLLGGC*AILELHPILHV Trigger: GACGTGCAGGATAGGGTGAAGTTCCAGAATAGCTCAGCAGCCTCCCAGCAGGTAGCAGCATCTTGAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | GACTGGGTGGACTTCTCCTTGATGTGCTGTGTGGGGTaGTTAAGTGACTGTGAGGGCTCCTCCTTGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: DWVDFSLMCCVG*LSDCEGSSLSD Trigger: GTCACTCAAGGAGGAGCCCTCACAGTCACTTAAGCACCCCACACAGCACATCAAGGAGAAGTCCACCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | TCCTTCTGGAAGGACTGGGTGGACTTCTCCTTGATGTaGTGTGTGGGGTGCTTAAGTGACTGTGAGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SFWKDWVDFSLM*CVGCLSDCEGS Trigger: GGAGCCCTCACAGTCACTTAAGCACCCCACACAGCACATCAAGGAGAAGTCCACCCAGTCCTTCCAGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CCA 72 bp | GATGCTGCTACCTGCTGGGAGGCTGCTGAGCTATTCTaGAACTTCACCCTATCCTGCACGTCGTCAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DAATCWEAAELF*NFTLSCTSSTA Trigger: TGCAGTTGACGACGTGCAGGATAGGGTGAAGTTCCAGAATAGCTCAGCAGCCTCCCAGCAGGTAGCAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTACACACACTACAGTGAAGTTTGCTTGGCAGGCAGAGGTGCCTGGGAGCACTAGGCTGAGCCAGACATaGACCTTTCTGCCACTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ATHTTVKFAWQAEVPGSTRLSQT*TFLPLR Trigger: CCTTAGTGGCAGAAAGGTCAATGTCTGGCTCAGCCT...AGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR TCA 72 bp | GGCAATGTTGAAGGGCACGCCCAGACCCATATCTCCTaGCCTCTGGTAAAGCTGGCAAGACAGTTCCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GNVEGHAQTHIS*PLVKLARQFPI Trigger: AATGGGGAACTGTCTTGCCAGCTTTACCAGAGGTCAGGAGATATGGGTCTGGGCGTGCCCTTCAACATTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141630.8 ENSMUST00000146520.5 ENSMUST00000196095.5 |
||
| 3UTR GCA 72 bp | TTTTTCAAGCAGGTCAGTCCTGCCCTTCATCCTTACTaGAGCAGGTGTGCACCCTCACCTCCAACAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: FFKQVSPALHPY*SRCAPSPPTAQ Trigger: CTGTGCTGTTGGAGGTGAGGGTGCACACCTGCTGCAGTAAGGATGAAGGGCAGGACTGACCTGCTTGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | CACTGTCTCCACTTTGTTTTTCAAGCAGGTCAGTCCTaGCCTTCATCCTTACTGCAGCAGGTGTGCACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HCLHFVFQAGQS*PSSLLQQVCTL Trigger: GAGGGTGCACACCTGCTGCAGTAAGGATGAAGGGCAGGACTGACCTGCTTGAAAAACAAAGTGGAGACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR CCA 72 bp | CACTACAGTGAAGTTTGCTTGGCAGGCAGAGGTGCCTaGGAGCACTCACGAGGCAGAGTTTTTCACAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HYSEVCLAGRGA*EHSRGRVFHRN Trigger: GTTTCTGTGAAAAACTCTGCCTCGTGAGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACCTAGTTCCCCTCTCTTTCAGCCCTGGCCTGCCACTCAGGTGTACCCTGTCTCATCAGGGTTGGTTTaGATGGTGTCAATCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPSSPLFQPWPATQVYPVSSGLV*MVSITF Trigger: AAAAGTGATTGACACCATCAAAACCAACCCTGATGA...GACAGGGTACACCTGAGTGGCAGGCCAGGGCTGAAAGAGAGGGGAACTAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGCTCCATTTTTCTCTCGACCACCTAGTTCCCCTCTCTTTCAGCCCTGGCCTTGCGAGGACTTTTCCTaGATGGACTGTGTGTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LAPFFSRPPSSPLFQPWPCEDFS*MDCVWS Trigger: TGACCACACACAGTCCATCAAGGAAAAGTCCTCGCA...AGGCCAGGGCTGAAAGAGAGGGGAACTAGGTGGTCGAGAGAAAAATGGAGCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACATGCTTCTGTCATCAGGGTaGGTTTTGATGGTGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: WQGGSAIRGRSFGFQAHMLLSSG*VLMVSI Trigger: GATTGACACCATCAAAACCAACCCTGATGACAGAAG...CATGTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000141630.8 ENSMUST00000146520.5 ENSMUST00000196095.5 |
||
| 3UTR GCA 72 bp | AAGGACTTCGAGGGTTCTGCCTTGAGGGACTGCAAGTaGTTCTACCTGAAGTACTTCGTACGCTACTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: KDFEGSALRDCK*FYLKYFVRYSM Trigger: CATGGAGTAGCGTACGAAGTACTTCAGGTAGAAGCACTTGCAGTCCCTCAAGGCAGAACCCTCGAAGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | TCCTTGAAGGACTTCGAGGGTTCTGCCTTGAGGGACTaGAAGTGCTTCTACCTGAAGTACTTCGTACGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLKDFEGSALRD*KCFYLKYFVRY Trigger: GTAGCGTACGAAGTACTTCAGGTAGAAGCACTTGCAGTCCCTCAAGGCAGAACCCTCGAAGTCCTTCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CCA 72 bp | TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTaGACTTGCAAACTTTATATGCCCCAGTACAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPSRPSLEREAH*TCKLYMPQYKG Trigger: TCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTATGTGAGGGCTCCTCCTaGAGGGACTGCATGGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KGIHHGLANRWVYNEKKLCEGSS*RDCMGS Trigger: GGACCCCATGCAGTCCCTCAAGGAGGAGCCCTCACA...TAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATaGCCCAGTACAAGGGAATGCCAGGGCCAAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WKERPIGLANFI*PSTRECQGQEV Trigger: CACTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | AGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTaGAAACTTTATATGCCCCAGTACAAGGGAATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRPSLEREAHWT*KLYMPQYKGMP Trigger: TGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | GTGGACAAAATCACCTGGCTGCAGGCCTGTGATATGTaGAATCATGTAGGTGAGCAGAGCATAGCTGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VDKITWLQACDM*NHVGEQSIAGN Trigger: ATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGCCTGCAGCCAGGTGATTTTGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196095.5 |
||
| 3UTR CCA 72 bp | GTACGCTACTCCATGAGTGACTGTAATGGCTACTCTTaGAGGTGTACACAGAAGTGGATGCTCACTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VRYSMSDCNGYS*RCTQKWMLTVS Trigger: GCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATTACAGTCACTCATGGAGTAGCGTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCTACTCTTGGAGGTGTACACAGAAGTGGATGCTCACTGTCAGCTATTGGTGCGAGGACTTTTCCTaGATGGACTGTGTGTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NGYSWRCTQKWMLTVSYWCEDFS*MDCVWS Trigger: TGACCACACACAGTCCATCAAGGAAAAGTCCTCGCA...CCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CCA 72 bp | GACTGTAATGGCTACTCTTGGAGGTGTACACAGAAGTaGATGCTCACTGTCAGCTATTGGATGGATCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: DCNGYSWRCTQK*MLTVSYWMDHR Trigger: CCTGTGATCCATCCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATTACAGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGATTGAATTCTGACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCTAGATGGGTGGACTTCTCCTaGATGTGCTGTGTGGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRLNSDIAKPWPLFQCPRWVDFS*MCCVGC Trigger: GCACCCCACACAGCACATCAAGGAGAAGTCCACCCA...TCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGAGGGACTGTGAGGGCTCATACTTGAAGGACTTCGAGGGTTCCTTCTGGTCTGAATCCATATCTTaGTACTCTGCTCCAAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: SMRDCEGSYLKDFEGSFWSESIS*YSAPKC Trigger: GCATTTTGGAGCAGAGTACAAAGATATGGATTCAGA...CCAGAAGGAACCCTCGAAGTCCTTCAAGTATGAGCCCTCACAGTCCCTCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACATGATTCATCAGGGTTGGTTTaGATGGTGTCAATCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ARRQCHQGKIFWVPGTHDSSGLV*MVSITF Trigger: AAAAGTGATTGACACCATCAAAACCAACCCTGATGA...ATCATGTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000141630.8 ENSMUST00000146520.5 ENSMUST00000196095.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTATGTGAGGGCTCCTCCTaGAGGGACTGCATAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: KGIHHGLANRWVYNEKKLCEGSS*RDCIES Trigger: GGATTCTATGCAGTCCCTCAAGGAGGAGCCCTCACA...TAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCTTTTCACTGTCTCCACTTTGTTTTTCAAGCAGGTCAGTCCTGCCCTTCACTTCTGTCATCAGGGTaGGTTTTGATGGTGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: VAFHCLHFVFQAGQSCPSLLSSG*VLMVSI Trigger: GATTGACACCATCAAAACCAACCCTGATGACAGAAG...TGAAGGGCAGGACTGACCTGCTTGAAAAACAAAGTGGAGACAGTGAAAAGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTTTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTTACAAAGACTTCTCCTaGATGGGCTGTGTTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QSFSQKLTSWNFSVLITCYKDFS*MGCVGS Trigger: GGACCCAACACAGCCCATCAAGGAGAAGTCTTTGTA...ACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAAACTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTCTAAGTCTAAGCATGACCATTGCTAATTTGCAATTGAATGGAGTACCTGCTTTGGGAAAGGTCTaGGTTCTCGCTGTAGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GALSLSMTIANLQLNGVPALGKV*VLAVAE Trigger: TTCAGCTACAGCGAGAACCAAGACCTTTCCCAAAGC...AGGTACTCCATTCAATTGCAAATTAGCAATGGTCATGCTTAGACTTAGAGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR GCA 72 bp | CCCTATCCCCACGTTAGTCTGGTGTATGGCTCCACGTaGTCTCTTTTAGTATTATCTTATTATAAGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PYPHVSLVYGST*SLLVLSYYKCL Trigger: AAGGCACTTATAATAAGATAATACTAAAAGAGAGCACGTGGAGCCATACACCAGACTAACGTGGGGATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCACTCCTGAATATAAAAAGAAAGGGGGAGAATGCTACACACACTACAGTGTTTGTGGGTTCCACATaGAGGAACTACAAAGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RALLNIKRKGENATHTTVFVGST*RNYKDF Trigger: GAAGTCTTTGTAGTTCCTCAATGTGGAACCCACAAA...CACTGTAGTGTGTGTAGCATTCTCCCCCTTTCTTTTTATATTCAGGAGTGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CCA 72 bp | CTCACGAGGCAGAGTTTTTCACAGAAACTCACCTCCTaGAACTTTAGTGTTCTCATAACCTGTATACTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LTRQSFSQKLTS*NFSVLITCILI Trigger: TATGAGTATACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAAACTCTGCCTCGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR TCA 72 bp | CCTCCAACAGCACAGGTGGCAGTTATTAAATCTTCATaGAGAAGCATTCTAAGTACATATTGTGGTTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PPTAQVAVIKSS*RSILSTYCGFG Trigger: ACCAAAACCACAATATGTACTTAGAATGCTTCTTCATGAAGATTTAATAACTGCCACCTGTGCTGTTGGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTATACTCTGTGCCATTAAACATTaGAGCTTTGATCAGGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: FSQKLTSWNFSVLITCILCAIKH*SFDQES Trigger: AGATTCCTGATCAAAGCTCAAATGTTTAATGGCACA...GAGTATACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | GCATGGCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACCGAACACCGACAGGGTaGCAGTGCCCGTGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWQGGSAIRGRSFGFQAHRTPTG*QCPCGP Trigger: AGGACCGCACGGGCACTGGCACCCTGTCGGTGTTCG...GTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR GCA 90 bp | GATATGTGCAATCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTGAAGGGCACCGAACACCGACAGGGTaGCAGTGCCCGTGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DMCNHVGEQSIAGNVEGHRTPTG*QCPCGP Trigger: AGGACCGCACGGGCACTGGCACCCTGTCGGTGTTCG...GTGCCCTTCAACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR GCA 90 bp | TCCTTGAAGGACTTCGAGGGTTCTGCCTTGAGGGACTGCAAGTGCTTCTACCTGTGTATCGTGCCTGCATaGCGAACACCGACAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLKDFEGSALRDCKCFYLCIVPA*RTPTGC Trigger: GCACCCTGTCGGTGTTCGGCATGCAGGCACGATACA...CAGGTAGAAGCACTTGCAGTCCCTCAAGGCAGAACCCTCGAAGTCCTTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CAA 72 bp | ATGGGGTCCTCCATGAGGGACTGTGAGGGCTCATCCTaGAAGGACTTAGAGGGTTCCTCCTTGAACGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MGSSMRDCEGSS*KDLEGSSLNDC Trigger: GCAGTCGTTCAAGGAGGAACCCTCTAAGTCCTTCAAGGATGAGCCCTCACAGTCCCTCATGGAGGACCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGGGGGAGAATGCTACACACACTACAGTGAAGTTTGCTTGGCAGGCACCGACAGGGTGCCAGTaGCCGTGCGGTCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRKGENATHTTVKFAWQAPTGCQ*PCGPPS Trigger: AGAAGGAGGACCGCACGGGCACTGGCACCCTGTCGG...TGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGCATTCTCCCCCTTTCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CAA 72 bp | GAGGGTTCCTTCTGGAAGGACTGGGTGGACTTCTCCTaGATGTGCTGTGTGGGGTGCTTAAGTGACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSFWKDWVDFS*MCCVGCLSDCE Trigger: CTCACAGTCACTTAAGCACCCCACACAGCACATCAAGGAGAAGTCCACCCAGTCCTTCCAGAAGGAACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTGTGAGGGCTCATCCTGAAGGACTTTGTGGGTTCCACATTGAGGAACTATGTATCGTGCCTGCATaGCGAACACCGACAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTVRAHPEGLCGFHIEELCIVPA*RTPTGC Trigger: GCACCCTGTCGGTGTTCGGCATGCAGGCACGATACA...TAGTTCCTCAATGTGGAACCCACAAAGTCCTTCAGGATGAGCCCTCACAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCTAGATCACTCTATTGCTCAGCCACTGCCACTGTTCCCCTTCAAGATGTCTCAGGCTGTATCGTaGCTGCATGCCGAACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLDHSIAQPLPLFPFKMSQAVS*LHAEHR Trigger: TCGGTGTTCGGCATGCAGGCACGATACAGCCTGAGA...CATCTTGAAGGGGAACAGTGGCAGTGGCTGAGCAATAGAGTGATCTAGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | GCATCTCCCAAAGTGTGGACAAAATCACCTGGCTGCAGGCCTGTGATATGTGCATCTCAGGCTGTATCGTaGCTGCATGCCGAACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASPKVWTKSPGCRPVICASQAVS*LHAEHR Trigger: TCGGTGTTCGGCATGCAGGCACGATACAGCCTGAGA...TGCACATATCACAGGCCTGCAGCCAGGTGATTTTGTCCACACTTTGGGAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196095.5 |
||
| 3UTR CAA 72 bp | GAGGGCTCATCCTTGAAGGACTTCGAGGGTTCTGCCTaGAGGGACTGCAAGTGCTTCTACCTGAAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLKDFEGSA*RDCKCFYLKYF Trigger: GAAGTACTTCAGGTAGAAGCACTTGCAGTCCCTCAAGGCAGAACCCTCGAAGTCCTTCAAGGATGAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | CATGGCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACAAAAATGTGCTCCACCTaGCTCAGGTACTGGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGKEAVPSGEDLLGSRHTKMCST*LRYWSS Trigger: AGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTT...TGTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTGTGATATGTGCAATCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTTGTATCGTGCCTGCATaGCGAACACCGACAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QACDMCNHVGEQSIAGNVCIVPA*RTPTGC Trigger: GCACCCTGTCGGTGTTCGGCATGCAGGCACGATACA...AACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR GCA 90 bp | CCCATTGGACTTGCAAACTTTATATGCCCCAGTACAAGGGAATGCCAGGGCCAATCTCAGGCTGTATCGTaGCTGCATGCCGAACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: PIGLANFICPSTRECQGQSQAVS*LHAEHR Trigger: TCGGTGTTCGGCATGCAGGCACGATACAGCCTGAGA...TTGGCCCTGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTAGATCACTCTATTGCTCAGCCACTGCCACTGTTCCCCTTCAAGATGTTGGAAACCATAAACTaGGCCCAGGTCCCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLDHSIAQPLPLFPFKMLETIN*AQVPFL Trigger: CAGGAAGGGGACCTGGGCCCAGTTTATGGTTTCCAA...CATCTTGAAGGGGAACAGTGGCAGTGGCTGAGCAATAGAGTGATCTAGGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR GCA 90 bp | GCTGAATTTTCAGCGGCTCTATATGATTCAGGTAAATATGTGCATCTCCCAAAGCCGACAGGGTGCCAGTaGCCGTGCGGTCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEFSAALYDSGKYVHLPKPTGCQ*PCGPPS Trigger: AGAAGGAGGACCGCACGGGCACTGGCACCCTGTCGG...CTTTGGGAGATGCACATATTTACCTGAATCATATAGAGCCGCTGAAAATTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTACGAACACCGACAGGGTaGCAGTGCCCGTGCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGIHHGLANRWVYNEKKLRTPTG*QCPCGP Trigger: AGGACCGCACGGGCACTGGCACCCTGTCGGTGTTCG...TAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CAA 72 bp | ATAGAATCCTCTATGAGGGAATGTGAGGGCTCATCCTaGAAGGACTTCGAGGGTTCTGCCTTGAGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IESSMRECEGSS*KDFEGSALRDC Trigger: GCAGTCCCTCAAGGCAGAACCCTCGAAGTCCTTCAAGGATGAGCCCTCACATTCCCTCATAGAGGATTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CAA 72 bp | GAGGGTTCCTCCTTGAACGACTGCGAGGACTTTTCCTaGATGGACTGTGTGTGGTCATTGAGTGACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLNDCEDFS*MDCVWSLSDCE Trigger: CTCACAGTCACTCAATGACCACACACAGTCCATCAAGGAAAAGTCCTCGCAGTCGTTCAAGGAGGAACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| 3UTR CAA 72 bp | GAGGGCTCATCCTTGAAGGACTTAGAGGGTTCCTCCTaGAACGACTGCGAGGACTTTTCCTTGATGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLKDLEGSS*NDCEDFSLMDC Trigger: ACAGTCCATCAAGGAAAAGTCCTCGCAGTCGTTCAAGGAGGAACCCTCTAAGTCCTTCAAGGATGAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGCTGCTGAGCTATTCTGGAACTTCACCCTATCCTGCACGTCGTCAACTACACTCGTTTGGTTGTaGGCAGAGGAAATTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: WEAAELFWNFTLSCTSSTTLVWL*AEEIHL Trigger: GAGATGAATTTCCTCTGCTCACAACCAAACGAGTGT...AGTTGACGACGTGCAGGATAGGGTGAAGTTCCAGAATAGCTCAGCAGCCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACATGATGATACACTCGTTTGGTTGTaGGCAGAGGAAATTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRQCHQGKIFWVPGTHDDTLVWL*AEEIHL Trigger: GAGATGAATTTCCTCTGCTCACAACCAAACGAGTGT...ATCATCATGTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR TCA 90 bp | CTTCGAGGGTTCCTTCTGGAAGGACTGGGTGGACTTCTCCTTGATGTGCTGTGTCTTTTCGAAGGATTTTaGGCTTTGGGAAAGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRGFLLEGLGGLLLDVLCLFEGF*ALGKVL Trigger: CAAGACCTTTCCCAAAGCTCAAAATCCTTCGAAAAG...ACACAGCACATCAAGGAGAAGTCCACCCAGTCCTTCCAGAAGGAACCCTCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAAGGGAATGCCAGACAAAATCACCTGGCTaGAGGCCTGTGATATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERPIGLANFICPSTRECQTKSPG*RPVICA Trigger: TGCACATATCACAGGCCTGCAGCCAGGTGATTTTGT...CTGGCATTCCCTTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR CCA 90 bp | AATGGCTACTCTTGGAGGTGTACACAGAAGTGGATGCTCACTGTCAGCTATTGGGCATCTCCCAAAGTGTaGACAAAATCACCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGYSWRCTQKWMLTVSYWASPKV*TKSPGC Trigger: GCAGCCAGGTGATTTTGTCCACACTTTGGGAGATGC...CCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| 3UTR CAA 72 bp | GTGGGTTCCACATTGAGGAACTACAAAGACTTCTCCTaGATGGGCTGTGTTGGGTCCTTGAGTAACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGSTLRNYKDFS*MGCVGSLSNCE Trigger: CTCACAGTTACTCAAGGACCCAACACAGCCCATCAAGGAGAAGTCTTTGTAGTTCCTCAATGTGGAACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR TCA 90 bp | CTTCGAGGGTTCCTTCTGGAAGGACTGGGTGGACTTCTCCTTGATGTGCTGTGTTGCAATACGGATAACTaGCTTTCCTTTCCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRGFLLEGLGGLLLDVLCCNTDN*LSFPLS Trigger: AGAAAGAGGAAAGGAAAGTCAGTTATCCGTATTGCA...ACACAGCACATCAAGGAGAAGTCCACCCAGTCCTTCCAGAAGGAACCCTCGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTACTCTTGGAGGTGTACACAGAAGTGGATGCTCACTGTCAGCTATTGGAAAATGTGCTCCACCTaGCTCAGGTACTGGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGYSWRCTQKWMLTVSYWKMCST*LRYWSS Trigger: AGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTT...CCAATAGCTGACAGTGAGCATCCACTTCTGTGTACACCTCCAAGAGTAGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTGTGATATGTGCAATCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTAAAATGTGCTCCACCTaGCTCAGGTACTGGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QACDMCNHVGEQSIAGNVKMCST*LRYWSS Trigger: AGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTT...AACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTGTGATATGTGCAATCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTACACTCGTTTGGTTGTaGGCAGAGGAAATTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QACDMCNHVGEQSIAGNVTLVWL*AEEIHL Trigger: GAGATGAATTTCCTCTGCTCACAACCAAACGAGTGT...AACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
||
| CDS-3UTR GCA 90 bp | AGGAATCTTGACTTAGCTCCATTTTTCTCTCGACCACCTAGTTCCCCTCTCTTTCAGGCCTGTGATATGTaGAATCATGTAGGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNLDLAPFFSRPPSSPLFQACDM*NHVGEQ Trigger: CTGCTCACCTACATGATTGCACATATCACAGGCCTG...AAAGAGAGGGGAACTAGGTGGTCGAGAGAAAAATGGAGCTAAGTCAAGATTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR CCA 90 bp | TCCTTGAAGGACTTCGAGGGTTCTGCCTTGAGGGACTGCAAGTGCTTCTACCTGTTCCATTTTAATCGTTaGATGTGGATTATACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLKDFEGSALRDCKCFYLFHFNR*MWIIPF Trigger: GAAGGGTATAATCCACATCCAACGATTAAAATGGAA...CAGGTAGAAGCACTTGCAGTCCCTCAAGGCAGAACCCTCGAAGTCCTTCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| 3UTR CAA 72 bp | ACGGGAGCTCTAAGTCTAAGCATGACCATTGCTAATTaGCAATTGAATGGAGTACCTGGACTTCCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGALSLSMTIAN*QLNGVPGLPPK Trigger: CTTTGGGGGAAGTCCAGGTACTCCATTCAATTGCAAATTAGCAATGGTCATGCTTAGACTTAGAGCTCCCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGATTGAATTCTGACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCTAGAATGGCAAGGAGGCAGTaGCATCAGGGGAAGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLNSDIAKPWPLFQCPRMARRQ*HQGKIF Trigger: AAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCAT...TCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR CCA 90 bp | AGAGCACTCCTGAATATAAAAAGAAAGGGGGAGAATGCTACACACACTACAGTGAATCTCGGGATCCATTaGCATCCCAGATTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RALLNIKRKGENATHTTVNLGIH*HPRFSL Trigger: GAGTGAGAATCTGGGATGCCAATGGATCCCGAGATT...CACTGTAGTGTGTGTAGCATTCTCCCCCTTTCTTTTTATATTCAGGAGTGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTGTGGACAAAATCACCTaGCTGCAGGCCTGTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: QSFSQKLTSWNFSVLITCVDKIT*LQACDM Trigger: CATATCACAGGCCTGCAGCCAGGTGATTTTGTCCAC...ACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAAACTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR CCA 90 bp | AAGGGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTAATCACTTTTTGCAGCTaGTCTACTCCTTGTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGIHHGLANRWVYNEKKLITFCS*STPCPE Trigger: CTCGGGACAAGGAGTAGACCAGCTGCAAAAAGTGAT...TAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS-3UTR TCA 90 bp | AGGAATCTTGACTTAGCTCCATTTTTCTCTCGACCACCTAGTTCCCCTCTCTTTGATTCTCACTCCCTTTaGGGACAATTCTTTAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RNLDLAPFFSRPPSSPLFDSHSL*GQFFSI Trigger: AATGCTAAAGAATTGTCCTCAAAGGGAGTGAGAATC...AAAGAGAGGGGAACTAGGTGGTCGAGAGAAAAATGGAGCTAAGTCAAGATTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| 3UTR CAA 72 bp | TTGAAATCATCGATTGTCTCAACTTTTCGAAGGATTTaGAGCTTTGGGAAAGGTCTTGGTTCTCGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSSIVSTFRRI*SFGKGLGSRCS Trigger: GCTACAGCGAGAACCAAGACCTTTCCCAAAGCTCAAAATCCTTCGAAAAGTTGAGACAATCGATGATTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTATACTCAAGGATTTTGAGCTTTaGGAAAGGTCTTGGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSQKLTSWNFSVLITCILKDFEL*ERSWFS Trigger: CGAGAACCAAGACCTTTCCCAAAGCTCAAAATCCTT...GAGTATACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| 3UTR CAA 72 bp | TTCCAATGTCCTAGAAAATGCTTGAAGCCGAGGAGCTaGGAAGAGACAATGAAACTAATTAGGCATTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQCPRKCLKPRS*EETMKLIRHYK Trigger: TTTGTAATGCCTAATTAGTTTCATTGTCTCTTCCAAGCTCCTCGGCTTCAAGCATTTTCTAGGACATTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTATTTAATCGTTGGATGTaGATTATACCCTTCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGIHHGLANRWVYNEKKLFNRWM*IIPFNL Trigger: CAGATTGAAGGGTATAATCCACATCCAACGATTAAA...TAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
||
| CDS GCA 90 bp | GTGCGGTCCTCCTTCTTGAAGCCGCAGCGCAAAATGTGCTCCACCTaGCTCAGGTACTGGAGTTCTCCATGCCGTGGGGCTTCCGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRSSFLKPQRKMCST*LRYWSSPCRGASAL Trigger: GAGCGCGGAAGCCCCACGGCATGGAGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTTGCGCTGCGGCTTCAAGAAGGAGGACCGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000196872.2 ENSMUST00000198095.2 |
||
| CDS GCA 90 bp | CAGCTGGTCTACTCCTTGTCCCGAGTAATCTCTCAGGCTGTATCGTaGCTGCATGCCGAACACCGACAGGGTGCCAGTGCCCGTGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLVYSLSRVISQAVS*LHAEHRQGASARAV Trigger: GACCGCACGGGCACTGGCACCCTGTCGGTGTTCGGCATGCAGGCACGATACAGCCTGAGAGATTACTCGGGACAAGGAGTAGACCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196872.2 |
||
| CDS CCA 90 bp | CAAAATGTGCTCCACCTGCCTCAGGTACTGGAGTTCTCCATGCCGTaGGGCTTCCGCGCTCAGCTGCTGAGCATCGGACTGCAGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QNVLHLPQVLEFSMP*GFRAQLLSIGLQLG Trigger: TCCGAGCTGCAGTCCGATGCTCAGCAGCTGAGCGCGGAAGCCCCACGGCATGGAGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000196872.2 ENSMUST00000198095.2 |
||
| CDS GCA 90 bp | CTACTCCTTGTCCCGAGTAATCTCTCAGGCTGTATCGTGCCTGCATaGCGAACACCGACAGGGTGCCAGTGCCCGTGCGGTCCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLVPSNLSGCIVPA*RTPTGCQCPCGPPS Trigger: AGAAGGAGGACCGCACGGGCACTGGCACCCTGTCGGTGTTCGGCATGCAGGCACGATACAGCCTGAGAGATTACTCGGGACAAGGAGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196872.2 |
||
| CDS-3UTR CAA 90 bp | GCATGGCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACGTGCGGTCCTCCTTCTaGAAGCCGCAGCGCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: AWQGGSAIRGRSFGFQAHVRSSF*KPQRKM Trigger: CATTTTGCGCTGCGGCTTCAAGAAGGAGGACCGCAC...GTGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
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| CDS-3UTR CAA 90 bp | GACTGTGAGGGCTCATCCTTGAAGGACTTAGAGGGTTCCTCCTTGAACGACTGCGTGCGGTCCTCCTTCTaGAAGCCGCAGCGCAAAATG | + |
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Preference number: 5 (lower is better) Translates to: DCEGSSLKDLEGSSLNDCVRSSF*KPQRKM Trigger: CATTTTGCGCTGCGGCTTCAAGAAGGAGGACCGCAC...GCAGTCGTTCAAGGAGGAACCCTCTAAGTCCTTCAAGGATGAGCCCTCACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| CDS-3UTR CAA 90 bp | GGCATGGCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACAGCATTTGTGGATCCCTaGATAAACCACAACAACTCC | + |
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Preference number: 5 (lower is better) Translates to: GMARRQCHQGKIFWVPGTAFVDP*INHNNS Trigger: GGAGTTGTTGTGGTTTATCAAGGGATCCACAAATGC...TGTGCCTGGAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146520.5 |
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| CDS-3UTR CAA 90 bp | TGTGATATGTGCAATCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTGAAGGGGTGCGGTCCTCCTTCTaGAAGCCGCAGCGCAAAATG | + |
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Preference number: 5 (lower is better) Translates to: CDMCNHVGEQSIAGNVEGVRSSF*KPQRKM Trigger: CATTTTGCGCTGCGGCTTCAAGAAGGAGGACCGCAC...CCCTTCAACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141630.8 ENSMUST00000196095.5 |
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| CDS-3UTR CAA 90 bp | GCTACACACACTACAGTGAAGTTTGCTTGGCAGGCAGAGGTGCCTGGGAGCACTCTTCTGTCATCAGGGTaGGTTTTGATGGTGTCAATC | + |
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Preference number: 5 (lower is better) Translates to: ATHTTVKFAWQAEVPGSTLLSSG*VLMVSI Trigger: GATTGACACCATCAAAACCAACCCTGATGACAGAAG...AGTGCTCCCAGGCACCTCTGCCTGCCAAGCAAACTTCACTGTAGTGTGTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
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| CDS-3UTR CAA 90 bp | ACAGTTCCCCATTCACCACATAGAACTGACAGAGGGCATGGCAAGGAGGCAGTGTTGTCCCGAGTAATCTaGATAAACCACAACAACTCC | + |
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Preference number: 5 (lower is better) Translates to: TVPHSPHRTDRGHGKEAVLSRVI*INHNNS Trigger: GGAGTTGTTGTGGTTTATCAAGATTACTCGGGACAA...CACTGCCTCCTTGCCATGCCCTCTGTCAGTTCTATGTGGTGAATGGGGAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196095.5 |
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| CDS-3UTR CAA 90 bp | GACTGTGAGGGCTCATCCTTGAAGGACTTAGAGGGTTCCTCCTTGAACGACTGCTCATCAGGGTTGGTTTaGATGGTGTCAATCACTTTT | + |
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Preference number: 5 (lower is better) Translates to: DCEGSSLKDLEGSSLNDCSSGLV*MVSITF Trigger: AAAAGTGATTGACACCATCAAAACCAACCCTGATGA...GCAGTCGTTCAAGGAGGAACCCTCTAAGTCCTTCAAGGATGAGCCCTCACAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
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| CDS-3UTR CAA 90 bp | AGGAATCTTGACTTAGCTCCATTTTTCTCTCGACCACCTAGTTCCCCTCTCTTTGCTTTGGGAAAGGTCTaGGTTCTCGCTGTAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: RNLDLAPFFSRPPSSPLFALGKV*VLAVAE Trigger: TTCAGCTACAGCGAGAACCAAGACCTTTCCCAAAGC...AAAGAGAGGGGAACTAGGTGGTCGAGAGAAAAATGGAGCTAAGTCAAGATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
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| CDS-3UTR CAA 90 bp | AGAGCACTCCTGAATATAAAAAGAAAGGGGGAGAATGCTACACACACTACAGTGTTCCAGAACACTCGTTaGGTTGTGAGCAGAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: RALLNIKRKGENATHTTVFQNTR*VVSRGN Trigger: ATTTCCTCTGCTCACAACCAAACGAGTGTTCTGGAA...CACTGTAGTGTGTGTAGCATTCTCCCCCTTTCTTTTTATATTCAGGAGTGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| CDS-3UTR CAA 90 bp | TTAAGATTGAATTCTGACATAGCTAAGCCTTGGCCACTGTTCCAATGTCCTAGAAAATCTCGGGATCCATaGGCATCCCAGATTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: LRLNSDIAKPWPLFQCPRKSRDP*ASQILT Trigger: AGTGAGAATCTGGGATGCCAATGGATCCCGAGATTT...TCTAGGACATTGGAACAGTGGCCAAGGCTTAGCTATGTCAGAATTCAATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
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| CDS-3UTR CAA 90 bp | CAGAGTTTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTGTGCCATCTAGGACCTaGATAAACCACAACAACTCC | + |
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Preference number: 5 (lower is better) Translates to: QSFSQKLTSWNFSVLITCVPSRT*INHNNS Trigger: GGAGTTGTTGTGGTTTATCAAGGTCCTAGATGGCAC...ACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAAACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141630.8 |
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| CDS-3UTR CAA 90 bp | CAGAGTTTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTTTCCAGAACACTCGTTaGGTTGTGAGCAGAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: QSFSQKLTSWNFSVLITCFQNTR*VVSRGN Trigger: ATTTCCTCTGCTCACAACCAAACGAGTGTTCTGGAA...ACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAAACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 |
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| CDS-3UTR CAA 90 bp | AAGGGTATTCACCATGGCCTAGCGAATAGGTGGGTTTACAATGAGAAAAAGTTAGCATTTGTGGATCCCTaGATAAACCACAACAACTCC | + |
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Preference number: 5 (lower is better) Translates to: KGIHHGLANRWVYNEKKLAFVDP*INHNNS Trigger: GGAGTTGTTGTGGTTTATCAAGGGATCCACAAATGC...TAACTTTTTCTCATTGTAAACCCACCTATTCGCTAGGCCATGGTGAATACCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
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| CDS-3UTR CAA 90 bp | AGAGCACTCCTGAATATAAAAAGAAAGGGGGAGAATGCTACACACACTACAGTGTCTGAATCCATATCTTaGTACTCTGCTCCAAAATGC | + |
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Preference number: 5 (lower is better) Translates to: RALLNIKRKGENATHTTVSESIS*YSAPKC Trigger: GCATTTTGGAGCAGAGTACAAAGATATGGATTCAGA...CACTGTAGTGTGTGTAGCATTCTCCCCCTTTCTTTTTATATTCAGGAGTGCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
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| CDS-3UTR CAA 90 bp | TTTTCACAGAAACTCACCTCCTGGAACTTTAGTGTTCTCATAACCTGTATACTCACTTTTCGAAGGATTTaGAGCTTTGGGAAAGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: FSQKLTSWNFSVLITCILTFRRI*SFGKGL Trigger: AAGACCTTTCCCAAAGCTCAAAATCCTTCGAAAAGT...GAGTATACAGGTTATGAGAACACTAAAGTTCCAGGAGGTGAGTTTCTGTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026846.11 |
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| CDS TCA 72 bp | AGTTCTCCATGCCGTGGGGCTTCCGCGCTCAGCTGCTaGGCATCGGACTGCAGCTCGGAGCCAACCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSPCRGASALSC*ASDCSSEPTTS Trigger: GCTGGTGGTTGGCTCCGAGCTGCAGTCCGATGCTCAGCAGCTGAGCGCGGAAGCCCCACGGCATGGAGAACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000196872.2 ENSMUST00000198095.2 |
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| CDS CCA 72 bp | CTCCACCTGCCTCAGGTACTGGAGTTCTCCATGCCGTaGGGCTTCCGCGCTCAGCTGCTGAGCATCGGACTG | + |
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Preference number: 6 (lower is better) Translates to: LHLPQVLEFSMP*GFRAQLLSIGL Trigger: CAGTCCGATGCTCAGCAGCTGAGCGCGGAAGCCCCACGGCATGGAGAACTCCAGTACCTGAGGCAGGTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000196872.2 ENSMUST00000198095.2 |
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| CDS CCA 72 bp | CCGCAGCGCAAAATGTGCTCCACCTGCCTCAGGTACTaGAGTTCTCCATGCCGTGGGGCTTCCGCGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PQRKMCSTCLRY*SSPCRGASALS Trigger: GCTGAGCGCGGAAGCCCCACGGCATGGAGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTTGCGCTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000196872.2 ENSMUST00000198095.2 |
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| CDS GCA 72 bp | TCCTTCTTGAAGCCGCAGCGCAAAATGTGCTCCACCTaGCTCAGGTACTGGAGTTCTCCATGCCGTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFLKPQRKMCST*LRYWSSPCRGA Trigger: AGCCCCACGGCATGGAGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTTGCGCTGCGGCTTCAAGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000196872.2 ENSMUST00000198095.2 |
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| CDS GCA 72 bp | GTGCGGTCCTCCTTCTTGAAGCCGCAGCGCAAAATGTaGTCCACCTGCCTCAGGTACTGGAGTTCTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: VRSSFLKPQRKM*STCLRYWSSPC Trigger: GCATGGAGAACTCCAGTACCTGAGGCAGGTGGAGCACATTTTGCGCTGCGGCTTCAAGAAGGAGGACCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000196872.2 ENSMUST00000198095.2 |
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| CDS GCA 72 bp | AGCAGAGGAAATTCATCTCTCAGGCTGTATCGTGCCTaGATGCCGAACACCGACAGGGTGCCAGTGCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: SRGNSSLRLYRA*MPNTDRVPVPV Trigger: CACGGGCACTGGCACCCTGTCGGTGTTCGGCATGCAGGCACGATACAGCCTGAGAGATGAATTTCCTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000198095.2 |
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| CDS GCA 72 bp | TACTCCTTGTCCCGAGTAATCTCTCAGGCTGTATCGTaGCTGCATGCCGAACACCGACAGGGTGCCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: YSLSRVISQAVS*LHAEHRQGASA Trigger: GGCACTGGCACCCTGTCGGTGTTCGGCATGCAGGCACGATACAGCCTGAGAGATTACTCGGGACAAGGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196872.2 |
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| CDS TCA 72 bp | CCTCCAAAACACCCTTCCAGAACACTCGTTTGGTTGTaGGCAGAGGAAATTCATCTCTCAGGCTGTATCGTG | + |
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Preference number: 6 (lower is better) Translates to: PPKHPSRTLVWL*AEEIHLSGCIV Trigger: CACGATACAGCCTGAGAGATGAATTTCCTCTGCTCACAACCAAACGAGTGTTCTGGAAGGGTGTTTTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026846.11 ENSMUST00000141630.8 ENSMUST00000196095.5 ENSMUST00000198095.2 |
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