Pregenerated sensors for TXNRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020250Ensembl transcript IDs: ENSMUST00000020484.9, ENSMUST00000218694.2, ENSMUST00000219368.3, ENSMUST00000219442.3, ENSMUST00000219962.3
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTGTCATGGTGACCCCAGTGCGATGCTGCAGCCTCCTTCGACCTaGCACCTCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: VCHGDPSAMLQPPST*HLLPTRSQGPGGLR Trigger: CCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCACCATGACAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR TCA 90 bp | GGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCTaGGGTGGCCCAGAAGGGTACTGTGAAACGCCACTCAGTACTGCA | + |
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Preference number: 1 (lower is better) Translates to: GRVGAAGWTPGKSLP*GGPEGYCETPLSTA Trigger: TGCAGTACTGAGTGGCGTTTCACAGTACCCTTCTGGGCCACCTCAGGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR GCA 90 bp | GCCAGATGTCAGTCTGAGTCTGTCATGGTGACCCCAGTGCGATGCTaGAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ARCQSESVMVTPVRC*SLLRPATSYPQDPR Trigger: CCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCACCATGACAGACTCAGACTGACATCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR GCA 90 bp | TCTGCCAGATGTCAGTCTGAGTCTGTCATGGTGACCCCAGTGCGATaGTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCC | + |
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Preference number: 1 (lower is better) Translates to: SARCQSESVMVTPVR*CSLLRPATSYPQDP Trigger: GGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCACCATGACAGACTCAGACTGACATCTGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR TCA 90 bp | CCACCACTTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTaGTGCTCTGCCAGATGTCAGTCTGAGTCTGTCATGGTGACCCCA | + |
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Preference number: 1 (lower is better) Translates to: PPLGLEASDFMDACL*CSARCQSESVMVTP Trigger: TGGGGTCACCATGACAGACTCAGACTGACATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR GCA 90 bp | CTGCCTCTACCCTGCGATGCTCTAAGCTACCCAAGAGCCATGCGATaGAGTTCAAGTAGATTAGCCAAGTCGCCACCTCCCTTGCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: LPLPCDALSYPRAMR*SSSRLAKSPPPLLS Trigger: GCTTAGCAAGGGAGGTGGCGACTTGGCTAATCTACTTGAACTGCATCGCATGGCTCTTGGGTAGCTTAGAGCATCGCAGGGTAGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR GCA 90 bp | ATAATTGTACCAGGAGAGACACTCACTGCTGGTCTGCCTCTACCCTaGGATGCTCTAAGCTACCCAAGAGCCATGCGATGCAGTTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: IIVPGETLTAGLPLP*DALSYPRAMRCSSS Trigger: ACTTGAACTGCATCGCATGGCTCTTGGGTAGCTTAGAGCATCGCAGGGTAGAGGCAGACCAGCAGTGAGTGTCTCTCCTGGTACAATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCCACTCACTGCTGGTCTaGCTCTACCCTGCGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: ASWGRVGAAGWTPGKSLPHSLLV*LYPAML Trigger: GAGCATCGCAGGGTAGAGGCAGACCAGCAGTGAGTG...GGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCGGCAAGAAAAGAAGCTaGAGGGCCAGGCCGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: ASWGRVGAAGWTPGKSLPGKKRS*RARPCM Trigger: CATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCC...GGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCACTGCCCACCACTTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGGTGACCCCAGTGCGATaGTGCAGCCTCCTTCGACCT | + |
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Preference number: 2 (lower is better) Translates to: CHCPPLGLEASDFMDACLVTPVR*CSLLRP Trigger: AGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCAC...CAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR CAA 90 bp | CTCAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTaGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LNRPGSSSVTAHHLG*RPVTSWTHACDALP Trigger: TGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCCACTCACTGCTGGTCTaGCTCTACCCTGCGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: KGRARKEAAGPGRVWWETHSLLV*LYPAML Trigger: GAGCATCGCAGGGTAGAGGCAGACCAGCAGTGAGTG...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | CAGCCATGCCGGCAGAGTACTGGCTGTCCTGACAGAGTTCCTGTGGGCTCACTGAGGAGAGACACTCACTaGTGGTCTGCCTCTACCCTG | + |
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Preference number: 2 (lower is better) Translates to: QPCRQSTGCPDRVPVGSLRRDTH*WSASTL Trigger: CAGGGTAGAGGCAGACCAGCAGTGAGTGTCTCTCCT...CAGTGAGCCCACAGGAACTCTGTCAGGACAGCCAGTACTCTGCCGGCATGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATGTGACCCCAGTGCGATaGTGCAGCCTCCTTCGACCT | + |
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Preference number: 2 (lower is better) Translates to: LGLRPVTSWTHACDALPDVTPVR*CSLLRP Trigger: AGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCAC...ATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCTCTACAGGAAAAGGTTaGGCTCAACAGACCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KGRARKEAAGPGRVWWETSTGKG*AQQTRQ Trigger: CTGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTAGA...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAAGGAAGCAAGGCAATaGTCTGTAGTCTTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: PVRCCSLLRPATSYPQDPKEARQ*SVVLAT Trigger: TGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTT...GGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGGTGGCCCAGAAGGGTACTGTGAAACGCCACTCAGTACTGCAGGTGGGGCAGATGGACCAGCCATaGCAAAAACTGATTGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: PEVAQKGTVKRHSVLQVGQMDQP*QKLIAN Trigger: ATTAGCAATCAGTTTTTGTCATGGCTGGTCCATCTG...CCCCACCTGCAGTACTGAGTGGCGTTTCACAGTACCCTTCTGGGCCACCTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | TACCTCAGAAGATGTATAGGCTGTGTGGAGGAAGAGCCACTTGCCTGTGAATGTGTGACCCCAGTGCGATaGTGCAGCCTCCTTCGACCT | + |
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Preference number: 2 (lower is better) Translates to: YLRRCIGCVEEEPLACECVTPVR*CSLLRP Trigger: AGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCAC...ACATTCACAGGCAAGTGGCTCTTCCTCCACACAGCCTATACATCTTCTGAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CCA 90 bp | TTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCAAGGAAGCAAGGCAATaGTCTGTAGTCTTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: LNWRLGPKSLPELHLGVGKEARQ*SVVLAT Trigger: TGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTT...GCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR CCA 90 bp | AATCACATGATTAGTTACCCTACACTGTCTGTTGTTCTGATCTCAGAGACTGGCTGTGAGGGAGCCTCGTaGGGCAGGGTGGGTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: NHMISYPTLSVVLISETGCEGAS*GRVGAA Trigger: AGCAGCACCCACCCTGCCCCACGAGGCTCCCTCACA...GCCAGTCTCTGAGATCAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CCA 90 bp | TACAGGAAAAGGTTGAGCTCAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCAAGGAAGCAAGGCAATaGTCTGTAGTCTTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: YRKRLSSTDPAALLSLPTKEARQ*SVVLAT Trigger: TGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTT...GGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR TCA 90 bp | AATCACATGATTAGTTACCCTACACTGTCTGTTGTTCTGATCTCAGAGACTGGCGAGTACTGGCTGTCCTaGCAGAGTTCCTGTGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: NHMISYPTLSVVLISETGEYWLS*QSSCGL Trigger: GAGCCCACAGGAACTCTGTCAGGACAGCCAGTACTC...GCCAGTCTCTGAGATCAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR CAA 90 bp | ATTAGACAGCTTGAAAGTGAGACTAAGACAATCTACAGGAAAAGGTaGAGCTCAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACT | + |
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Preference number: 2 (lower is better) Translates to: IRQLESETKTIYRKR*SSTDPAALLSLPTT Trigger: AGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTAGATTGTCTTAGTCTCACTTTCAAGCTGTCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAACACCAAGTTTCACTCACTGCTGGTCTaGCTCTACCCTGCGATGCTC | + |
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Preference number: 2 (lower is better) Translates to: VLMGHSLRLNPPHKNTKFHSLLV*LYPAML Trigger: GAGCATCGCAGGGTAGAGGCAGACCAGCAGTGAGTG...AAACTTGGTGTTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAACACCAAGTTTTCTACAGGAAAAGGTTaGGCTCAACAGACCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VLMGHSLRLNPPHKNTKFSTGKG*AQQTRQ Trigger: CTGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTAGA...AAACTTGGTGTTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGAATGTAGTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAACAGCTCTTCTGTCACTaGCCACCACTTGGGCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: CECSSYGTQLKTKSTSQKQLFCH*PPLGLE Trigger: CTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTG...TTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAACTACATTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CCA 90 bp | TACCTCAGAAGATGTATAGGCTGTGTGGAGGAAGAGCCACTTGCCTGTGAATGTTTTCTGGGGATAAATTaGTTTGGCTCTCATAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: YLRRCIGCVEEEPLACECFLGIN*FGSHKP Trigger: TGGCTTATGAGAGCCAAACCAATTTATCCCCAGAAA...ACATTCACAGGCAAGTGGCTCTTCCTCCACACAGCCTATACATCTTCTGAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR TCA 90 bp | AATCACATGATTAGTTACCCTACACTGTCTGTTGTTCTGATCTCAGAGACTGGCCAGATGGACCAGCCATaGCAAAAACTGATTGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: NHMISYPTLSVVLISETGQMDQP*QKLIAN Trigger: ATTAGCAATCAGTTTTTGTCATGGCTGGTCCATCTG...GCCAGTCTCTGAGATCAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGAATGTAGTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAACCAAGAGCCATGCGATaGAGTTCAAGTAGATTAGCC | + |
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Preference number: 2 (lower is better) Translates to: CECSSYGTQLKTKSTSQKPRAMR*SSSRLA Trigger: GGCTAATCTACTTGAACTGCATCGCATGGCTCTTGG...TTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAACTACATTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CCA 90 bp | AATCACATGATTAGTTACCCTACACTGTCTGTTGTTCTGATCTCAGAGACTGGCGGAAACTTGCAAAAGTaGCCAATGGTTTTTCTCGTT | + |
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Preference number: 2 (lower is better) Translates to: NHMISYPTLSVVLISETGGNLQK*PMVFLV Trigger: AACGAGAAAAACCATTGGCCACTTTTGCAAGTTTCC...GCCAGTCTCTGAGATCAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR TCA 90 bp | AATCACATGATTAGTTACCCTACACTGTCTGTTGTTCTGATCTCAGAGACTGGCTTAAGCGTTTTCCACTaGGAACCAGACAATAATTGT | + |
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Preference number: 2 (lower is better) Translates to: NHMISYPTLSVVLISETGLSVFH*EPDNNC Trigger: ACAATTATTGTCTGGTTCTCAGTGGAAAACGCTTAA...GCCAGTCTCTGAGATCAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAATGTAGTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAAAAGGAAGCAAGGCAATaGTCTGTAGTCTTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: CECSSYGTQLKTKSTSQKKEARQ*SVVLAT Trigger: TGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTT...TTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAACTACATTCACA 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR GCA 72 bp | GGTGACCCCAGTGCGATGCTGCAGCCTCCTTCGACCTaGCACCTCCTACCCACAAGATCCCAGGGACCCGGT | + |
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Preference number: 3 (lower is better) Translates to: GDPSAMLQPPST*HLLPTRSQGPG Trigger: ACCGGGTCCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCCATGCCGGCAGAGTACTGGCTGTCCTGACAGAGTTCCTGTGGGCTCACTGGCCCACCACTTGGGCTaGAGGCCAGTGACTTCATGG | + |
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Preference number: 3 (lower is better) Translates to: QPCRQSTGCPDRVPVGSLAHHLG*RPVTSW Trigger: CCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGC...CAGTGAGCCCACAGGAACTCTGTCAGGACAGCCAGTACTCTGCCGGCATGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCCATGCCGGCAGAGTACTGGCTGTCCTGACAGAGTTCCTGTGGGCTCACTGGTCACTGCCCACCACTaGGGCTTGAGGCCAGTGACT | + |
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Preference number: 3 (lower is better) Translates to: QPCRQSTGCPDRVPVGSLVTAHH*GLRPVT Trigger: AGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGAC...CAGTGAGCCCACAGGAACTCTGTCAGGACAGCCAGTACTCTGCCGGCATGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR TCA 72 bp | GGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCTaGGGTGGCCCAGAAGGGTACTGTGAAACGCCACTC | + |
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Preference number: 3 (lower is better) Translates to: GAAGWTPGKSLP*GGPEGYCETPL Trigger: GAGTGGCGTTTCACAGTACCCTTCTGGGCCACCTCAGGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CAA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCGTCACTGCCCACCACTaGGGCTTGAGGCCAGTGACT | + |
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Preference number: 3 (lower is better) Translates to: KGRARKEAAGPGRVWWETVTAHH*GLRPVT Trigger: AGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGAC...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR-3UTR CAA 90 bp | GCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCCACACTGCAGGAAACTaGCAAAAGTGGCCAATGGTT | + |
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Preference number: 3 (lower is better) Translates to: ASWGRVGAAGWTPGKSLPHTAGN*QKWPMV Trigger: AACCATTGGCCACTTTTGCAAGTTTCCTGCAGTGTG...GGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
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| 3UTR GCA 72 bp | CAGTCTGAGTCTGTCATGGTGACCCCAGTGCGATGCTaGAGCCTCCTTCGACCTGCCACCTCCTACCCACAA | + |
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Preference number: 3 (lower is better) Translates to: QSESVMVTPVRC*SLLRPATSYPQ Trigger: TTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCACCATGACAGACTCAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR GCA 72 bp | TGTCAGTCTGAGTCTGTCATGGTGACCCCAGTGCGATaGTGCAGCCTCCTTCGACCTGCCACCTCCTACCCA | + |
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Preference number: 3 (lower is better) Translates to: CQSESVMVTPVR*CSLLRPATSYP Trigger: TGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCACCATGACAGACTCAGACTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCCAATGGTCTGTAGTCTaGGCAACAGCATCCACACTG | + |
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Preference number: 3 (lower is better) Translates to: PVRCCSLLRPATSYPQDPQWSVV*ATASTL Trigger: CAGTGTGGATGCTGTTGCCAAGACTACAGACCATTG...GGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| 3UTR-3UTR CAA 90 bp | CGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGACCAATGGTCTGTAGTCTaGGCAACAGCATCCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: RCCSLLRPATSYPQDPRDQWSVV*ATASTL Trigger: CAGTGTGGATGCTGTTGCCAAGACTACAGACCATTG...GTCCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR TCA 72 bp | GATGCTCTGCCAGATGTCAGTCTGAGTCTGTCATGGTaGCCCCAGTGCGATGCTGCAGCCTCCTTCGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: DALPDVSLSLSW*PQCDAAASFDL Trigger: CAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTCACCATGACAGACTCAGACTGACATCTGGCAGAGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR TCA 72 bp | GGACGCATGCCTGTGATGCTCTGCCAGATGTCAGTCTaGGTCTGTCATGGTGACCCCAGTGCGATGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRMPVMLCQMSV*VCHGDPSAMLQ Trigger: CTGCAGCATCGCACTGGGGTCACCATGACAGACTCAGACTGACATCTGGCAGAGCATCACAGGCATGCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR GCA 72 bp | CCAGGAGAGACACTCACTGCTGGTCTGCCTCTACCCTaGGATGCTCTAAGCTACCCAAGAGCCATGCGATGC | + |
|
Preference number: 3 (lower is better) Translates to: PGETLTAGLPLP*DALSYPRAMRC Trigger: GCATCGCATGGCTCTTGGGTAGCTTAGAGCATCGCAGGGTAGAGGCAGACCAGCAGTGAGTGTCTCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| 3UTR TCA 72 bp | GGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTaGTGCTCTGCCAGATGTCAGTCTGAGTCTGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: GLEASDFMDACL*CSARCQSESVM Trigger: CATGACAGACTCAGACTGACATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR GCA 72 bp | CCCTGCGATGCTCTAAGCTACCCAAGAGCCATGCGATaGAGTTCAAGTAGATTAGCCAAGTCGCCACCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PCDALSYPRAMR*SSSRLAKSPPP Trigger: GGGAGGTGGCGACTTGGCTAATCTACTTGAACTGCATCGCATGGCTCTTGGGTAGCTTAGAGCATCGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCCACACTGCAGGAAACTaGCAAAAGTGGCCAATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KGRARKEAAGPGRVWWETHTAGN*QKWPMV Trigger: AACCATTGGCCACTTTTGCAAGTTTCCTGCAGTGTG...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTGTCACTGCCCACCACTaGGGCTTGAGGCCAGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: LGINWFGSHKPSHPLPHSVTAHH*GLRPVT Trigger: AGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGAC...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR CCA 72 bp | CCAGACAATAATTGTACCAGGAGAGACACTCACTGCTaGTCTGCCTCTACCCTGCGATGCTCTAAGCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: PDNNCTRRDTHC*SASTLRCSKLP Trigger: GGGTAGCTTAGAGCATCGCAGGGTAGAGGCAGACCAGCAGTGAGTGTCTCTCCTGGTACAATTATTGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTAAAGCCCACCACTTGGGCTaGAGGCCAGTGACTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GINWFGSHKPSHPLPHSKAHHLG*RPVTSW Trigger: CCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGC...TTTACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTATCTACAGGAAAAGGTaGAGCTCAACAGACCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGINWFGSHKPSHPLPHSIYRKR*SSTDPA Trigger: TGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTAGAT...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAATGTAGTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAACAATGGTCTGTAGTCTaGGCAACAGCATCCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: CECSSYGTQLKTKSTSQKQWSVV*ATASTL Trigger: CAGTGTGGATGCTGTTGCCAAGACTACAGACCATTG...TTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAACTACATTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAATGTAGTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAAATCTACAGGAAAAGGTaGAGCTCAACAGACCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CECSSYGTQLKTKSTSQKIYRKR*SSTDPA Trigger: TGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTAGAT...TTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAACTACATTCACA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| 3UTR TCA 72 bp | AATTTGCATTACAATACATTGTGCGATTACAGAATATaGACAATGACGTATACTCCTTCTTGTGGGGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: NLHYNTLCDYRI*TMTYTPSCGGR Trigger: TCTACCCCCACAAGAAGGAGTATACGTCATTGTTCATATTCTGTAATCGCACAATGTATTGTAATGCAAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCGCAGCCGCAAAGCCCTaGGTCACCTCTCCAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASWGRVGAAGWTPGKSLPAAAKP*VTSPAF Trigger: AAACGCTGGAGAGGTGACGCAGGGCTTTGCGGCTGC...GGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR TCA 90 bp | GACCCCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGACCTCCATACAGCCTCTaGGCCAGCAATCTCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DPSAMLQPPSTCHLLPTRPPYSL*ASNLPA Trigger: GGCGGGGAGATTGCTGGCTCAGAGGCTGTATGGAGG...TCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGCCTCCATACAGCCTCTaGGCCAGCAATCTCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CDAAASFDLPPPTHKIPGPPYSL*ASNLPA Trigger: GGCGGGGAGATTGCTGGCTCAGAGGCTGTATGGAGG...CCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGACCCGGGTGGATGCCGATaGTGCTGTCCAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCCSLLRPATSYPQDPRDPGGCR*CCPAAA Trigger: AGCAGCAGCTGGACAGCACCATCGGCATCCACCCGG...GTCCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | GACCCCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGACCGGGTGGATGCCGATaGTGCTGTCCAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPSAMLQPPSTCHLLPTRPGGCR*CCPAAA Trigger: AGCAGCAGCTGGACAGCACCATCGGCATCCACCCGG...TCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | GTGAGGGAGCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATTGCTGCCAGTCCTCCTaGGCCTCCTCCAATGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VREPRGAGWVLLAGHQANCCQSS*ASSNDD Trigger: ATCATCATTGGAGGAGGCTCAGGAGGACTGGCAGCA...ATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGCTCCCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR GCA 90 bp | CGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGACCTTTGTCTCCAGGGATaGCCAGGTAGCGGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCCSLLRPATSYPQDPRDLCLQG*PGSGAS Trigger: AGAGGCCCCGCTACCTGGGCATCCCTGGAGACAAAG...GTCCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | GACCCCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGAGTTGGGGCAAGTGGGTaGCACCCAGACAGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DPSAMLQPPSTCHLLPTRVGASG*HPDSLH Trigger: GTGCAGACTGTCTGGGTGGCACCCACTTGCCCCAAC...TCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR CCA 90 bp | GTGAGGGAGCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATTTTGGACCCAGCACGTaGAAGCCCACGACACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VREPRGAGWVLLAGHQANFGPST*KPTTRS Trigger: TGAACGTGTCGTGGGCTTCCACGTGCTGGGTCCAAA...ATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGCTCCCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR CCA 90 bp | CAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTTGAGGCCAGTCCGGGTGGATGCCGATaGTGCTGTCCAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQTRQLFCHCPPLGLEASPGGCR*CCPAAA Trigger: AGCAGCAGCTGGACAGCACCATCGGCATCCACCCGG...ACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | CAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTTGAGGCCAGTACAGGGCGTCTGGGATaGGGAGGGGAGTGTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQTRQLFCHCPPLGLEASTGRLG*GGECLG Trigger: TCCAAGACACTCCCCTCCTCATCCCAGACGCCCTGT...ACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR GCA 90 bp | AGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGGCGCCTAGGACCCAAGAGCTTTGTCTCCAGGGATaGCCAGGTAGCGGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDPVALGQHLELAPRTQELCLQG*PGSGAS Trigger: AGAGGCCCCGCTACCTGGGCATCCCTGGAGACAAAG...CTCTTGGGTCCTAGGCGCCAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | CAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTTGAGGCCAGTCACAGACCGGGTGGATaGCGATGGTGCTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQTRQLFCHCPPLGLEASHRPGG*RWCCPA Trigger: AGCTGGACAGCACCATCGGCATCCACCCGGTCTGTG...ACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCCACCCTGAGTCGGCCTaGTGTTCCTGCTTCGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVRCCSLLRPATSYPQDPHPESA*CSCFDL Trigger: CAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTG...GGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | AGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGGCGCCTAGGACCCAAGAGTCTGCACAGACCGGGTaGATGCCGATGGTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDPVALGQHLELAPRTQESAQTG*MPMVLS Trigger: GGACAGCACCATCGGCATCCACCCGGTCTGTGCAGA...CTCTTGGGTCCTAGGCGCCAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | AGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGGCGCCTAGGACCCAAGAGGTAGGACAGGGCGTCTaGGATGAGGAGGGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDPVALGQHLELAPRTQEVGQGV*DEEGSV Trigger: GACACTCCCCTCCTCATCCCAGACGCCCTGTCCTAC...CTCTTGGGTCCTAGGCGCCAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCTCGCTGTTTGTGGATTaGGCAGTCACCCTGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRCCSLLRPATSYPQDPSLFVD*AVTLSR Trigger: CCGACTCAGGGTGACTGCTCAATCCACAAACAGCGA...GGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCACCAGCCAGAAATCCTaGACATTCCAAGGCGACATA | + |
|
Preference number: 4 (lower is better) Translates to: ASWGRVGAAGWTPGKSLPTSQKS*TFQGDI Trigger: TATGTCGCCTTGGAATGTGCAGGATTTCTGGCTGGT...GGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR CCA 90 bp | AGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGGCGCCTAGGACCCAAGAGCACCCTGAGTCGGCCTaGTGTTCCTGCTTCGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDPVALGQHLELAPRTQEHPESA*CSCFDL Trigger: CAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTG...CTCTTGGGTCCTAGGCGCCAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCATGCCGGCAGAGTACTGGCTGTCCTGACAGAGTTCCTGTGGGCTCACTGGAAACCAGCAACAGTTaGGGCAAGTGGGTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: QPCRQSTGCPDRVPVGSLETSNS*GKWVPP Trigger: GGGTGGCACCCACTTGCCCCAACTGTTGCTGGTTTC...CAGTGAGCCCACAGGAACTCTGTCAGGACAGCCAGTACTCTGCCGGCATGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR CCA 90 bp | CGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGACGCCTACTATCAGGTGTaGAGGGTGGAGGGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RCCSLLRPATSYPQDPRDAYYQV*RVEGRY Trigger: GTATCTGCCCTCCACCCTCCACACCTGATAGTAGGC...GTCCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR TCA 90 bp | CAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTTGAGGCCAGTTCGCTGTTTGTGGATTaGGCAGTCACCCTGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QQTRQLFCHCPPLGLEASSLFVD*AVTLSR Trigger: CCGACTCAGGGTGACTGCTCAATCCACAAACAGCGA...ACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | AGCACCTTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCCTTTGTCTCCAGGGATaGCCAGGTAGCGGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: STLNWRLGPKSLPELHLGLCLQG*PGSGAS Trigger: AGAGGCCCCGCTACCTGGGCATCCCTGGAGACAAAG...GCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAAGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGGCGTGGGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCGCAGCCGCAAAGCCCTaGGTCACCTCTCCAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGRGQGSKAMVCSLGNSAAAKP*VTSPAF Trigger: AAACGCTGGAGAGGTGACGCAGGGCTTTGCGGCTGC...GCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCCCACGCCCAGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCCTCCGAGACCCCATCTaGTCCCAAGAGGAGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STLNWRLGPKSLPELHLGLRDPI*SQEESV Trigger: CACCGACTCCTCTTGGGACCAGATGGGGTCTCGGAG...GCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAAGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | AGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGGCGCCTAGGACCCAAGAGTTTGGACCCAGCACGTaGAAGCCCACGACACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDPVALGQHLELAPRTQEFGPST*KPTTRS Trigger: TGAACGTGTCGTGGGCTTCCACGTGCTGGGTCCAAA...CTCTTGGGTCCTAGGCGCCAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CACCTGGGCGTGGGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATCTGCACAGACCGGGTaGATGCCGATGGTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLGVGKEARQWSVVLATASAQTG*MPMVLS Trigger: GGACAGCACCATCGGCATCCACCCGGTCTGTGCAGA...TGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCCCACGCCCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | TCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGTCTGCACAGACCGGGTaGATGCCGATGGTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYPQDPRDPVALGQHLELSAQTG*MPMVLS Trigger: GGACAGCACCATCGGCATCCACCCGGTCTGTGCAGA...CAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCCCTCAGCAGCCAGACTaGAGGATGTCTCCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STLNWRLGPKSLPELHLGPQQPD*RMSPPE Trigger: CTCTGGGGGAGACATCCTCCAGTCTGGCTGCTGAGG...GCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAAGGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TGTCACTGCCCACCACTTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGCTGCCAGTCCTCCTaGGCCTCCTCCAATGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CHCPPLGLEASDFMDACLCCQSS*ASSNDD Trigger: ATCATCATTGGAGGAGGCTCAGGAGGACTGGCAGCA...CAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCTGCTGCCAGTCCTCCTaGGCCTCCTCCAATGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGRARKEAAGPGRVWWETCCQSS*ASSNDD Trigger: ATCATCATTGGAGGAGGCTCAGGAGGACTGGCAGCA...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATCCACACTGGGGCACAGACCGGGTGGATaGCGATGGTGCTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKEARQWSVVLATASTLGHRPGG*RWCCPA Trigger: AGCTGGACAGCACCATCGGCATCCACCCGGTCTGTG...CCCCAGTGTGGATGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATCACAGACCGGGTGGATaGCGATGGTGCTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPVTSWTHACDALPDHRPGG*RWCCPA Trigger: AGCTGGACAGCACCATCGGCATCCACCCGGTCTGTG...ATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATCCACACTGGGGCTCCGAGACCCCATCTaGTCCCAAGAGGAGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKEARQWSVVLATASTLGLRDPI*SQEESV Trigger: CACCGACTCCTCTTGGGACCAGATGGGGTCTCGGAG...CCCCAGTGTGGATGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATCTCCGAGACCCCATCTaGTCCCAAGAGGAGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPVTSWTHACDALPDLRDPI*SQEESV Trigger: CACCGACTCCTCTTGGGACCAGATGGGGTCTCGGAG...ATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | AGCACCTTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCCACCCTGAGTCGGCCTaGTGTTCCTGCTTCGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLNWRLGPKSLPELHLGHPESA*CSCFDL Trigger: CAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTG...GCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAAGGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCTTTGGACCCAGCACGTaGAAGCCCACGACACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGRARKEAAGPGRVWWETFGPST*KPTTRS Trigger: TGAACGTGTCGTGGGCTTCCACGTGCTGGGTCCAAA...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATCCTCAGCAGCCAGACTaGAGGATGTCTCCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPVTSWTHACDALPDPQQPD*RMSPPE Trigger: CTCTGGGGGAGACATCCTCCAGTCTGGCTGCTGAGG...ATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATCCACACTGGGGCCTCAGCAGCCAGACTaGAGGATGTCTCCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKEARQWSVVLATASTLGPQQPD*RMSPPE Trigger: CTCTGGGGGAGACATCCTCCAGTCTGGCTGCTGAGG...CCCCAGTGTGGATGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTTGAGGCCAGTTCTACCTCGAGAAGCTaGGAAGTACAGCCAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQTRQLFCHCPPLGLEASSTSRS*EVQPAV Trigger: GACTGCTGGCTGTACTTCCCAGCTTCTCGAGGTAGA...ACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCAACAGTTGGGGCAAGTaGGTGCCACCCAGACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGRARKEAAGPGRVWWETNSWGK*VPPRQS Trigger: AGACTGTCTGGGTGGCACCCACTTGCCCCAACTGTT...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR TCA 90 bp | CAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTTGAGGCCAGTTCCTGTGAGGACCAATaGACCTCCCGTAAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQTRQLFCHCPPLGLEASSCEDQ*TSRKHS Trigger: AGAATGCTTACGGGAGGTTCATTGGTCCTCACAGGA...ACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGCAAAGCTGCCTGGTaGATCAGCTTCTTAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PVRCCSLLRPATSYPQDPSKAAW*ISFLGM Trigger: CATACCTAAGAAGCTGATGCACCAGGCAGCTTTGCT...GGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | GACCCCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGAACCAGCCAGAAATCCTaGACATTCCAAGGCGACATA | + |
|
Preference number: 4 (lower is better) Translates to: DPSAMLQPPSTCHLLPTRTSQKS*TFQGDI Trigger: TATGTCGCCTTGGAATGTGCAGGATTTCTGGCTGGT...TCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGACCAGCCAGAAATCCTaGACATTCCAAGGCGACATA | + |
|
Preference number: 4 (lower is better) Translates to: CDAAASFDLPPPTHKIPGTSQKS*TFQGDI Trigger: TATGTCGCCTTGGAATGTGCAGGATTTCTGGCTGGT...CCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | TCACCTGGGCGTGGGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCTTTGGACCCAGCACGTaGAAGCCCACGACACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGRGQGSKAMVCSLGNSFGPST*KPTTRS Trigger: TGAACGTGTCGTGGGCTTCCACGTGCTGGGTCCAAA...GCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCCCACGCCCAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCACTTGGGCTTGAGGCCAGTTGGAGGGAGAAAACCTaGAAACCAGCAACAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQTRQLFCHCPPLGLEASWREKT*KPATVG Trigger: CCCAACTGTTGCTGGTTTCCAGGTTTTCTCCCTCCA...ACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCGGAGCCATTCATTGTTaGCAGCTTTTGAAGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVRCCSLLRPATSYPQDPGAIHC*QLLKLA Trigger: GGCCAACTTCAAAAGCTGCCAACAATGAATGGCTCC...GGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR TCA 90 bp | TACAGGAAAAGGTTGAGCTCAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCTGCTGCCAGTCCTCCTaGGCCTCCTCCAATGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: YRKRLSSTDPAALLSLPTCCQSS*ASSNDD Trigger: ATCATCATTGGAGGAGGCTCAGGAGGACTGGCAGCA...GGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATTCGCTGTTTGTGGATTaGGCAGTCACCCTGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPVTSWTHACDALPDSLFVD*AVTLSR Trigger: CCGACTCAGGGTGACTGCTCAATCCACAAACAGCGA...ATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TACAGGAAAAGGTTGAGCTCAACAGACCCGGCAGCTCTTCTGTCACTGCCCACCTCGCTGTTTGTGGATTaGGCAGTCACCCTGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YRKRLSSTDPAALLSLPTSLFVD*AVTLSR Trigger: CCGACTCAGGGTGACTGCTCAATCCACAAACAGCGA...GGTGGGCAGTGACAGAAGAGCTGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGTCGGCCTGGTGTTCCTaGTTCGATCTGTTCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CDAAASFDLPPPTHKIPGSAWCS*FDLFNF Trigger: AAAATTGAACAGATCGAAGCAGGAACACCAGGCCGA...CCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCCAAGAGGAGTCGGTGTaGCAAAATCCAAGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STLNWRLGPKSLPELHLGQEESV*QNPRPA Trigger: TGCTGGTCTTGGATTTTGTCACACCGACTCCTCTTG...GCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAAGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGTCCTGTGAGGACCAATaGACCTCCCGTAAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYPQDPRDPVALGQHLELSCEDQ*TSRKHS Trigger: AGAATGCTTACGGGAGGTTCATTGGTCCTCACAGGA...CAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TCACCTGGGCGTGGGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCTCCTGTGAGGACCAATaGACCTCCCGTAAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGRGQGSKAMVCSLGNSSCEDQ*TSRKHS Trigger: AGAATGCTTACGGGAGGTTCATTGGTCCTCACAGGA...GCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCCCACGCCCAGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGAAAGATCATCACTGCTaGTGCAGTACTCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CDAAASFDLPPPTHKIPGKDHHC*CSTLCL Trigger: GAGACAAAGAGTACTGCATCAGCAGTGATGATCTTT...CCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TACCTCAGAAGATGTATAGGCTGTGTGGAGGAAGAGCCACTTGCCTGTGAATGTCCTCCATACAGCCTCTaGGCCAGCAATCTCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLRRCIGCVEEEPLACECPPYSL*ASNLPA Trigger: GGCGGGGAGATTGCTGGCTCAGAGGCTGTATGGAGG...ACATTCACAGGCAAGTGGCTCTTCCTCCACACAGCCTATACATCTTCTGAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR CCA 90 bp | GACCCCAGTGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATTGTTGGCCATGTCTTaGTCAAATCCTCTAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DPSAMLQPPSTCHLLPTRLLAMS*SNPLRR Trigger: TCTCCTTAGAGGATTTGACCAAGACATGGCCAACAA...TCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCACTGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTTGTCTTGGAGGGACGTaGAGCAGGAAGCACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGINWFGSHKPSHPLPHSCLGGT*SRKHSP Trigger: GGGGCTGTGCTTCCTGCTTCACGTCCCTCCAAGACA...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR GCA 90 bp | TCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGAGCAAAGCTGCCTGGTaGATCAGCTTCTTAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SYPQDPRDPVALGQHLELSKAAW*ISFLGM Trigger: CATACCTAAGAAGCTGATGCACCAGGCAGCTTTGCT...CAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | AGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGGCGCCTAGGACCCAAGAGATTTTCTCCCAGTCATaGTTCACTGTGTCTTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: RDPVALGQHLELAPRTQEIFSQS*FTVSST Trigger: AGTCGAAGACACAGTGAAGCATGACTGGGAGAAAAT...CTCTTGGGTCCTAGGCGCCAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | CGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGACTTCGTTGGGACGAACTaGCTTATAAACTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: RCCSLLRPATSYPQDPRDFVGTN*LINLIP Trigger: TGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAA...GTCCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCTCGGCCTGGTGTTCCTaGTTCGATCTGTTCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNWRLGPKSLPELHLGVGSAWCS*FDLFNF Trigger: AAAATTGAACAGATCGAAGCAGGAACACCAGGCCGA...GCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | CTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCAAGGAAGCAAGGTCGGCCTGGTGTTCCTaGTTCGATCTGTTCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGPKSLPELHLGVGKEARSAWCS*FDLFNF Trigger: AAAATTGAACAGATCGAAGCAGGAACACCAGGCCGA...CCTTGCTTCCTTGCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTCTCCGAGACCCCATCTaGTCCCAAGAGGAGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGINWFGSHKPSHPLPHSLRDPI*SQEESV Trigger: CACCGACTCCTCTTGGGACCAGATGGGGTCTCGGAG...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTCCTCAGCAGCCAGACTaGAGGATGTCTCCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGINWFGSHKPSHPLPHSPQQPD*RMSPPE Trigger: CTCTGGGGGAGACATCCTCCAGTCTGGCTGCTGAGG...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCAAGGAAGCAAGGAAAGATCATCACTGCTaGTGCAGTACTCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGPKSLPELHLGVGKEARKDHHC*CSTLCL Trigger: GAGACAAAGAGTACTGCATCAGCAGTGATGATCTTT...CCTTGCTTCCTTGCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATCCACACTGGGGAGCAAAGCTGCCTGGTaGATCAGCTTCTTAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GKEARQWSVVLATASTLGSKAAW*ISFLGM Trigger: CATACCTAAGAAGCTGATGCACCAGGCAGCTTTGCT...CCCCAGTGTGGATGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | TACCTCAGAAGATGTATAGGCTGTGTGGAGGAAGAGCCACTTGCCTGTGAATGTATCAGGTGTGGAGGGTaGAGGGCAGATACAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLRRCIGCVEEEPLACECIRCGG*RADTGV Trigger: GACCCCTGTATCTGCCCTCCACCCTCCACACCTGAT...ACATTCACAGGCAAGTGGCTCTTCCTCCACACAGCCTATACATCTTCTGAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR TCA 90 bp | AGCACCTTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCAAAGATCATCACTGCTaGTGCAGTACTCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STLNWRLGPKSLPELHLGKDHHC*CSTLCL Trigger: GAGACAAAGAGTACTGCATCAGCAGTGATGATCTTT...GCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAAGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCTTCGTTGGGACGAACTaGCTTATAAACTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: LNWRLGPKSLPELHLGVGFVGTN*LINLIP Trigger: TGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAA...GCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATTCGGCCTGGTGTTCCTaGTTCGATCTGTTCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPVTSWTHACDALPDSAWCS*FDLFNF Trigger: AAAATTGAACAGATCGAAGCAGGAACACCAGGCCGA...ATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | GGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTAAAGCAGCCGCAAAGCCCTaGGTCACCTCTCCAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GINWFGSHKPSHPLPHSKAAAKP*VTSPAF Trigger: AAACGCTGGAGAGGTGACGCAGGGCTTTGCGGCTGC...TTTACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGTGGCCCAGAAGGGTACTGTGAAACGCCACTCAGTACTGCAGGTGGGGAGTAAATACAGTCGTTaGGACATTGTCATAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PEVAQKGTVKRHSVLQVGSKYSR*DIVIVT Trigger: TGTGACTATGACAATGTCCCAACGACTGTATTTACT...CCCCACCTGCAGTACTGAGTGGCGTTTCACAGTACCCTTCTGGGCCACCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR GCA 90 bp | AATCACATGATTAGTTACCCTACACTGTCTGTTGTTCTGATCTCAGAGACTGGCCTTTGTCTCCAGGGATaGCCAGGTAGCGGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHMISYPTLSVVLISETGLCLQG*PGSGAS Trigger: AGAGGCCCCGCTACCTGGGCATCCCTGGAGACAAAG...GCCAGTCTCTGAGATCAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR GCA 90 bp | CACCTGGGCGTGGGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATTCGTTGGGACGAACTaGCTTATAAACTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: HLGVGKEARQWSVVLATAFVGTN*LINLIP Trigger: TGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAA...TGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCCCACGCCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | TCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGTTCGTTGGGACGAACTaGCTTATAAACTTGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: SYPQDPRDPVALGQHLELFVGTN*LINLIP Trigger: TGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAA...CAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | ATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTAAAGACGCAGCCGCAAAGCCCTaGGTCACCTCTCCAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: INWFGSHKPSHPLPHSKDAAAKP*VTSPAF Trigger: AAACGCTGGAGAGGTGACGCAGGGCTTTGCGGCTGC...GTCTTTACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | AATCACATGATTAGTTACCCTACACTGTCTGTTGTTCTGATCTCAGAGACTGGCCACAGACCGGGTGGATaGCGATGGTGCTGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHMISYPTLSVVLISETGHRPGG*RWCCPA Trigger: AGCTGGACAGCACCATCGGCATCCACCCGGTCTGTG...GCCAGTCTCTGAGATCAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR CCA 90 bp | CTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCAAGGAAGCAAGGAGTAAATACAGTCGTTaGGACATTGTCATAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGPKSLPELHLGVGKEARSKYSR*DIVIVT Trigger: TGTGACTATGACAATGTCCCAACGACTGTATTTACT...CCTTGCTTCCTTGCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | TCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGAGTAAATACAGTCGTTaGGACATTGTCATAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SYPQDPRDPVALGQHLELSKYSR*DIVIVT Trigger: TGTGACTATGACAATGTCCCAACGACTGTATTTACT...CAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTAGCAAAGCTGCCTGGTaGATCAGCTTCTTAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGINWFGSHKPSHPLPHSSKAAW*ISFLGM Trigger: CATACCTAAGAAGCTGATGCACCAGGCAGCTTTGCT...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATAGTAAATACAGTCGTTaGGACATTGTCATAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPVTSWTHACDALPDSKYSR*DIVIVT Trigger: TGTGACTATGACAATGTCCCAACGACTGTATTTACT...ATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | GGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTAAATCCTGTGAGGACCAATaGACCTCCCGTAAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GINWFGSHKPSHPLPHSKSCEDQ*TSRKHS Trigger: AGAATGCTTACGGGAGGTTCATTGGTCCTCACAGGA...TTTACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| 3UTR CAA 72 bp | CTTGAAAGTGAGACTAAGACAATCTACAGGAAAAGGTaGAGCTCAACAGACCCGGCAGCTCTTCTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LESETKTIYRKR*SSTDPAALLSL Trigger: CAGTGACAGAAGAGCTGCCGGGTCTGTTGAGCTCAACCTTTTCCTGTAGATTGTCTTAGTCTCACTTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR GCA 90 bp | GGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTAAAACCAGCCAGAAATCCTaGACATTCCAAGGCGACATA | + |
|
Preference number: 4 (lower is better) Translates to: GINWFGSHKPSHPLPHSKTSQKS*TFQGDI Trigger: TATGTCGCCTTGGAATGTGCAGGATTTCTGGCTGGT...TTTACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAATGTAGTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAAAAAGATCATCACTGCTaGTGCAGTACTCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CECSSYGTQLKTKSTSQKKDHHC*CSTLCL Trigger: GAGACAAAGAGTACTGCATCAGCAGTGATGATCTTT...TTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAACTACATTCACA 39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS GCA 90 bp | ATCTCTGCACAGACCGGGTGGATGCCGATGGTGCTGTCCAGCTGCTaGTTAGTCAGCCCACACTTGAGCGCAGCCGCAAAGCCCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISAQTGWMPMVLSSC*LVSPHLSAAAKPCV Trigger: GACGCAGGGCTTTGCGGCTGCGCTCAAGTGTGGGCTGACTAAGCAGCAGCTGGACAGCACCATCGGCATCCACCCGGTCTGTGCAGAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 90 bp | TGGAGCCTCCATACAGCCTCTGAGCCAGCAATCTCCCCGCCTGGATaGCTACGGGAGTCAGCTCTAGCTTCCCCTCCAGGATGTCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: WSLHTASEPAISPPG*LRESALASPPGCHR Trigger: TCGGTGACATCCTGGAGGGGAAGCTAGAGCTGACTCCCGTAGCCATCCAGGCGGGGAGATTGCTGGCTCAGAGGCTGTATGGAGGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS GCA 90 bp | AATATCTCTGCACAGACCGGGTGGATGCCGATGGTGCTGTCCAGCTaGTGCTTAGTCAGCCCACACTTGAGCGCAGCCGCAAAGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NISAQTGWMPMVLSS*CLVSPHLSAAAKPC Trigger: GCAGGGCTTTGCGGCTGCGCTCAAGTGTGGGCTGACTAAGCAGCAGCTGGACAGCACCATCGGCATCCACCCGGTCTGTGCAGAGATATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | AAGGGGAGGGCAAGAAAAGAAGCTGCAGGGCCAGGCCGTGTATGGTGGGAAACCGGAAACCAGCAACAGTaGGGGCAAGTGGGTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KGRARKEAAGPGRVWWETGNQQQ*GQVGAT Trigger: GGTGGCACCCACTTGCCCCAACTGTTGCTGGTTTCC...GGTTTCCCACCATACACGGCCTGGCCCTGCAGCTTCTTTTCTTGCCCTCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR CAA 90 bp | AGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGGCGCCTAGGACCCAAGAGCTGATGCAGTACTCTTaGTCTCCAGGGATGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RDPVALGQHLELAPRTQELMQYS*SPGMPR Trigger: CCTGGGCATCCCTGGAGACAAAGAGTACTGCATCAG...CTCTTGGGTCCTAGGCGCCAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCGTGGGGCAGGGTGGGTGCTGCTGGCTGGACACCAGGCAAATCCCTTCCCCTTTACCTTTGTTATTaGTCGCCACAATCCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASWGRVGAAGWTPGKSLPLYLCY*SPQSCE Trigger: CTCACAGGATTGTGGCGACAAATAACAAAGGTAAAG...GGGAAGGGATTTGCCTGGTGTCCAGCCAGCAGCACCCACCCTGCCCCACGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS-3UTR CAA 90 bp | TGTCACTGCCCACCACTTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGCTGATGCAGTACTCTTaGTCTCCAGGGATGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHCPPLGLEASDFMDACLLMQYS*SPGMPR Trigger: CCTGGGCATCCCTGGAGACAAAGAGTACTGCATCAG...CAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | CTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCAAGGAAGCAAGGCTGATGCAGTACTCTTaGTCTCCAGGGATGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGPKSLPELHLGVGKEARLMQYS*SPGMPR Trigger: CCTGGGCATCCCTGGAGACAAAGAGTACTGCATCAG...CCTTGCTTCCTTGCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | CTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCAAGGAAGCAAGGCTCGCTGTTTGTGGATaGAGCAGTCACCCTGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGPKSLPELHLGVGKEARLAVCG*SSHPES Trigger: CGACTCAGGGTGACTGCTCAATCCACAAACAGCGAG...CCTTGCTTCCTTGCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS TCA 90 bp | TCAGCAGCCAGACTGGAGGATGTCTCCCCCAGAGCGCTTCGTCACTaGCAACGTTGTGAATATCTCTGCACAGACCGGGTGGATGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SAARLEDVSPRALRH*QRCEYLCTDRVDAD Trigger: ATCGGCATCCACCCGGTCTGTGCAGAGATATTCACAACGTTGTCAGTGACGAAGCGCTCTGGGGGAGACATCCTCCAGTCTGGCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS GCA 90 bp | GGAAACCAGCAACAGTTGGGGCAAGTGGGTGCCACCCAGACAGTCTaGACAAAGGTTCTACCTCGAGAAGCTGGGAAGTACAGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GNQQQLGQVGATQTV*TKVLPREAGKYSQQ Trigger: CTGCTGGCTGTACTTCCCAGCTTCTCGAGGTAGAACCTTTGTGCAGACTGTCTGGGTGGCACCCACTTGCCCCAACTGTTGCTGGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR CAA 90 bp | CACCTGGGCGTGGGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCACTCGCTGTTTGTGGATaGAGCAGTCACCCTGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HLGVGKEARQWSVVLATALAVCG*SSHPES Trigger: CGACTCAGGGTGACTGCTCAATCCACAAACAGCGAG...TGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCCCACGCCCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | TCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGCTCGCTGTTTGTGGATaGAGCAGTCACCCTGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SYPQDPRDPVALGQHLELLAVCG*SSHPES Trigger: CGACTCAGGGTGACTGCTCAATCCACAAACAGCGAG...CAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 90 bp | GCCGCAAAGCCCTGCGTCACCTCTCCAGCGTTTGGACCCAGCACGTaGAAGCCCACGACACGTTCATCGTCTTTAAGGTTGCAGATTATT | + |
|
Preference number: 5 (lower is better) Translates to: AAKPCVTSPAFGPST*KPTTRSSSLRLQII Trigger: AATAATCTGCAACCTTAAAGACGATGAACGTGTCGTGGGCTTCCACGTGCTGGGTCCAAACGCTGGAGAGGTGACGCAGGGCTTTGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATGTCAGTCTGCTCGCTGTTTGTGGATaGAGCAGTCACCCTGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPVTSWTHACDALPDVSLLAVCG*SSHPES Trigger: CGACTCAGGGTGACTGCTCAATCCACAAACAGCGAG...CAGACTGACATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | TTGAATTGGCGCCTAGGACCCAAGAGCCTTCCTGAACTTCACCTGGGCGTGGGCTGGAGCCATTCATTGTaGGCAGCTTTTGAAGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LNWRLGPKSLPELHLGVGWSHSL*AAFEVG Trigger: GCCAACTTCAAAAGCTGCCAACAATGAATGGCTCCA...GCCCACGCCCAGGTGAAGTTCAGGAAGGCTCTTGGGTCCTAGGCGCCAATTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS TCA 90 bp | CGCCCTCTATGGTCTCCTCGCTGTTTGTGGATTGAGCAGTCACCCTaGGTCGGCCTGGTGTTCCTGCTTCGATCTGTTCAATTTTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPLWSPRCLWIEQSP*VGLVFLLRSVQFSL Trigger: CAACGAAAATTGAACAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGCGAGGAGACCATAGAGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS GCA 90 bp | TCTCCCAGTCATGCTTCACTGTGTCTTCGACTTTCCAGCCATAGTTaGGCGAGTCTTTCAGAGCTTGTCCGAGCAAAGCTGCCTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSHASLCLRLSSHS*ASLSELVRAKLPGA Trigger: TGCACCAGGCAGCTTTGCTCGGACAAGCTCTGAAAGACTCGCGCAACTATGGCTGGAAAGTCGAAGACACAGTGAAGCATGACTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020484.9 ENSMUST00000218694.2 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 90 bp | GGTCTCCTCGCTGTTTGTGGATTGAGCAGTCACCCTGAGTCGGCCTaGTGTTCCTGCTTCGATCTGTTCAATTTTCGTTGGGACGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLAVCGLSSHPESA*CSCFDLFNFRWDEL Trigger: CAGTTCGTCCCAACGAAAATTGAACAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGCGAGGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | TGTCACTGCCCACCACTTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGACTTTCTTGTCAAATTaGGCTGCCTCCTTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CHCPPLGLEASDFMDACLTFLSN*AASLAA Trigger: AGCAGCTAAGGAGGCAGCCAAATTTGACAAGAAAGT...CAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | TGTCACTGCCCACCACTTGGGCTTGAGGCCAGTGACTTCATGGACGCATGCCTGATGTGTTCACCGATTTaGTTGGCCATGTCTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CHCPPLGLEASDFMDACLMCSPI*LAMSWS Trigger: TGACCAAGACATGGCCAACAAAATCGGTGAACACAT...CAGGCATGCGTCCATGAAGTCACTGGCCTCAAGCCCAAGTGGTGGGCAGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS TCA 90 bp | ACTGTGTTAAATTCGCCCTCTATGGTCTCCTCGCTGTTTGTGGATTaGGCAGTCACCCTGAGTCGGCCTGGTGTTCCTGCTTCGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVLNSPSMVSSLFVD*AVTLSRPGVPASIC Trigger: ACAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGCGAGGAGACCATAGAGGGCGAATTTAACACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | TCCTACCCACAAGATCCCAGGGACCCGGTGGCCTTAGGACAGCACCTTGAATTGACTTTCTTGTCAAATTaGGCTGCCTCCTTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SYPQDPRDPVALGQHLELTFLSN*AASLAA Trigger: AGCAGCTAAGGAGGCAGCCAAATTTGACAAGAAAGT...CAATTCAAGGTGCTGTCCTAAGGCCACCGGGTCCCTGGGATCTTGTGGGTAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCTGAGTCTGTCATGGTGACCCCAGTGCGATGCTGCAGCCTCCTTCGAATGTGTTCACCGATTTaGTTGGCCATGTCTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CQSESVMVTPVRCCSLLRMCSPI*LAMSWS Trigger: TGACCAAGACATGGCCAACAAAATCGGTGAACACAT...TCGAAGGAGGCTGCAGCATCGCACTGGGGTCACCATGACAGACTCAGACTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | TGCGATGCTGCAGCCTCCTTCGACCTGCCACCTCCTACCCACAAGATCCCAGGGAACTGCCTTATAAACTaGATACCATGTTCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CDAAASFDLPPPTHKIPGNCLIN*IPCSSM Trigger: CATGGAAGAACATGGTATCAAGTTTATAAGGCAGTT...CCCTGGGATCTTGTGGGTAGGAGGTGGCAGGTCGAAGGAGGCTGCAGCATCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATCCACACTGGGGACTTTCTTGTCAAATTaGGCTGCCTCCTTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKEARQWSVVLATASTLGTFLSN*AASLAA Trigger: AGCAGCTAAGGAGGCAGCCAAATTTGACAAGAAAGT...CCCCAGTGTGGATGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGTGACTTCATGGACGCATGCCTGTGATGCTCTGCCAGATGTCAGTCTGACTTTCTTGTCAAATTaGGCTGCCTCCTTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RPVTSWTHACDALPDVSLTFLSN*AASLAA Trigger: AGCAGCTAAGGAGGCAGCCAAATTTGACAAGAAAGT...CAGACTGACATCTGGCAGAGCATCACAGGCATGCGTCCATGAAGTCACTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTCTGATGCAGTACTCTTaGTCTCCAGGGATGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGINWFGSHKPSHPLPHSLMQYS*SPGMPR Trigger: CCTGGGCATCCCTGGAGACAAAGAGTACTGCATCAG...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGTGGCCCAGAAGGGTACTGTGAAACGCCACTCAGTACTGCAGGTGGGGAACTGCCTTATAAACTaGATACCATGTTCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PEVAQKGTVKRHSVLQVGNCLIN*IPCSSM Trigger: CATGGAAGAACATGGTATCAAGTTTATAAGGCAGTT...CCCCACCTGCAGTACTGAGTGGCGTTTCACAGTACCCTTCTGGGCCACCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 |
||
| CDS GCA 90 bp | GCTGTTTGTGGATTGAGCAGTCACCCTGAGTCGGCCTGGTGTTCCTaGTTCGATCTGTTCAATTTTCGTTGGGACGAACTGCCTTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVCGLSSHPESAWCS*FDLFNFRWDELPYK Trigger: TTTATAAGGCAGTTCGTCCCAACGAAAATTGAACAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGAAGCAAGGCAATGGTCTGTAGTCTTGGCAACAGCATCCACACTGGGGAACTGCCTTATAAACTaGATACCATGTTCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GKEARQWSVVLATASTLGNCLIN*IPCSSM Trigger: CATGGAAGAACATGGTATCAAGTTTATAAGGCAGTT...CCCCAGTGTGGATGCTGTTGCCAAGACTACAGACCATTGCCTTGCTTCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAACACCAAGTTTGAGGAGGGGAGTGTCTaGGAGGGACGTGAAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLMGHSLRLNPPHKNTKFEEGSV*EGREAG Trigger: TCCTGCTTCACGTCCCTCCAAGACACTCCCCTCCTC...AAACTTGGTGTTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGGATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTATGTGTTCACCGATTTaGTTGGCCATGTCTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGINWFGSHKPSHPLPHSMCSPI*LAMSWS Trigger: TGACCAAGACATGGCCAACAAAATCGGTGAACACAT...ACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTATCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 90 bp | ATACCATGTTCTTCCATGTGTTCACCGATTTTGTTGGCCATGTCTTaGTCAAATCCTCTAAGGAGAATGGACCGCACCATTACAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: IPCSSMCSPILLAMS*SNPLRRMDRTITVT Trigger: CGTCACTGTAATGGTGCGGTCCATTCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGAACATGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 90 bp | AGAGAGGCCACAACAGCCATATTCCAAAGGAGTAAATACAGTCGTTaGGACATTGTCATAGTCACATTTGACATTGGAGCCTCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: REATTAIFQRSKYSR*DIVIVTFDIGASIQ Trigger: CTGTATGGAGGCTCCAATGTCAAATGTGACTATGACAATGTCCCAACGACTGTATTTACTCCTTTGGAATATGGCTGTTGTGGCCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS GCA 90 bp | CCTGGTGTTCCTGCTTCGATCTGTTCAATTTTCGTTGGGACGAACTaGCTTATAAACTTGATACCATGTTCTTCCATGTGTTCACCGATT | + |
|
Preference number: 5 (lower is better) Translates to: PGVPASICSIFVGTN*LINLIPCSSMCSPI Trigger: AATCGGTGAACACATGGAAGAACATGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAAAATTGAACAGATCGAAGCAGGAACACCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | ATAAATTGGTTTGGCTCTCATAAGCCATCTCACCCACTTCCACACAGTAAAGACAACTGCCTTATAAACTaGATACCATGTTCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: INWFGSHKPSHPLPHSKDNCLIN*IPCSSM Trigger: CATGGAAGAACATGGTATCAAGTTTATAAGGCAGTT...GTCTTTACTGTGTGGAAGTGGGTGAGATGGCTTATGAGAGCCAAACCAATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTTATGGGACACAGCTTAAGACTAAATCCACCTCACAAAAACACCAAGTTTCTTTGGAGCCATTCATaGTTGGCAGCTTTTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLMGHSLRLNPPHKNTKFLWSHS*LAAFEV Trigger: AACTTCAAAAGCTGCCAACAATGAATGGCTCCAAAG...AAACTTGGTGTTTTTGTGAGGTGGATTTAGTCTTAAGCTGTGTCCCATAAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219368.3 |
||
| CDS GCA 72 bp | GCACAGACCGGGTGGATGCCGATGGTGCTGTCCAGCTaGTGCTTAGTCAGCCCACACTTGAGCGCAGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AQTGWMPMVLSS*CLVSPHLSAAA Trigger: TGCGGCTGCGCTCAAGTGTGGGCTGACTAAGCAGCAGCTGGACAGCACCATCGGCATCCACCCGGTCTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS GCA 72 bp | TTAGTCAGCCCACACTTGAGCGCAGCCGCAAAGCCCTaGGTCACCTCTCCAGCGTTTGGACCCAGCACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVSPHLSAAAKP*VTSPAFGPSTW Trigger: CCACGTGCTGGGTCCAAACGCTGGAGAGGTGACGCAGGGCTTTGCGGCTGCGCTCAAGTGTGGGCTGACTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 72 bp | CATACAGCCTCTGAGCCAGCAATCTCCCCGCCTGGATaGCTACGGGAGTCAGCTCTAGCTTCCCCTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HTASEPAISPPG*LRESALASPPG Trigger: TCCTGGAGGGGAAGCTAGAGCTGACTCCCGTAGCCATCCAGGCGGGGAGATTGCTGGCTCAGAGGCTGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 72 bp | CCCTGCGTCACCTCTCCAGCGTTTGGACCCAGCACGTaGAAGCCCACGACACGTTCATCGTCTTTAAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PCVTSPAFGPST*KPTTRSSSLRL Trigger: CAACCTTAAAGACGATGAACGTGTCGTGGGCTTCCACGTGCTGGGTCCAAACGCTGGAGAGGTGACGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS TCA 72 bp | TGTCTCCCCCAGAGCGCTTCGTCACTGACAACGTTGTaGATATCTCTGCACAGACCGGGTGGATGCCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CLPQSASSLTTL*ISLHRPGGCRW Trigger: CCATCGGCATCCACCCGGTCTGTGCAGAGATATTCACAACGTTGTCAGTGACGAAGCGCTCTGGGGGAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS TCA 72 bp | AATTCGCCCTCTATGGTCTCCTCGCTGTTTGTGGATTaGGCAGTCACCCTGAGTCGGCCTGGTGTTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NSPSMVSSLFVD*AVTLSRPGVPA Trigger: AGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGCGAGGAGACCATAGAGGGCGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS TCA 72 bp | AGACTGGAGGATGTCTCCCCCAGAGCGCTTCGTCACTaGCAACGTTGTGAATATCTCTGCACAGACCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLEDVSPRALRH*QRCEYLCTDRV Trigger: CACCCGGTCTGTGCAGAGATATTCACAACGTTGTCAGTGACGAAGCGCTCTGGGGGAGACATCCTCCAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS TCA 72 bp | TGGTCTCCTCGCTGTTTGTGGATTGAGCAGTCACCCTaGGTCGGCCTGGTGTTCCTGCTTCGATCTGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: WSPRCLWIEQSP*VGLVFLLRSVQ Trigger: TTGAACAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGCGAGGAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 72 bp | ACTGACAACGTTGTGAATATCTCTGCACAGACCGGGTaGATGCCGATGGTGCTGTCCAGCTGCTGCTTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TDNVVNISAQTG*MPMVLSSCCLV Trigger: GACTAAGCAGCAGCTGGACAGCACCATCGGCATCCACCCGGTCTGTGCAGAGATATTCACAACGTTGTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 90 bp | CACTGTGTTAAATTCGCCCTCTATGGTCTCCTCGCTGTTTGTGGATaGAGCAGTCACCCTGAGTCGGCCTGGTGTTCCTGCTTCGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: HCVKFALYGLLAVCG*SSHPESAWCSCFDL Trigger: CAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGCGAGGAGACCATAGAGGGCGAATTTAACACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS GCA 72 bp | GGATTGAGCAGTCACCCTGAGTCGGCCTGGTGTTCCTaGTTCGATCTGTTCAATTTTCGTTGGGACGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: GLSSHPESAWCS*FDLFNFRWDEL Trigger: CAGTTCGTCCCAACGAAAATTGAACAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 72 bp | GACTTTCCAGCCATAGTTGCGCGAGTCTTTCAGAGCTaGTCCGAGCAAAGCTGCCTGGTGCATCAGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DFPAIVARVFQS*SEQSCLVHQLL Trigger: AAGAAGCTGATGCACCAGGCAGCTTTGCTCGGACAAGCTCTGAAAGACTCGCGCAACTATGGCTGGAAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 90 bp | GTCCCAAGAGGAGTCGGTGTGACAAAATCCAAGACCAGCACTTTCTaGTCAAATTTGGCTGCCTCCTTAGCTGCTGCCAGTCCTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VPRGVGVTKSKTSTF*SNLAASLAAASPPE Trigger: CTCAGGAGGACTGGCAGCAGCTAAGGAGGCAGCCAAATTTGACAAGAAAGTGCTGGTCTTGGATTTTGTCACACCGACTCCTCTTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS GCA 72 bp | CATGCTTCACTGTGTCTTCGACTTTCCAGCCATAGTTaGGCGAGTCTTTCAGAGCTTGTCCGAGCAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HASLCLRLSSHS*ASLSELVRAKL Trigger: CAGCTTTGCTCGGACAAGCTCTGAAAGACTCGCGCAACTATGGCTGGAAAGTCGAAGACACAGTGAAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020484.9 ENSMUST00000218694.2 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 72 bp | GCTGTTTGTGGATTGAGCAGTCACCCTGAGTCGGCCTaGTGTTCCTGCTTCGATCTGTTCAATTTTCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVCGLSSHPESA*CSCFDLFNFRW Trigger: CCAACGAAAATTGAACAGATCGAAGCAGGAACACCAGGCCGACTCAGGGTGACTGCTCAATCCACAAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS TCA 72 bp | CTCCGAGACCCCATCTGGTCCCAAGAGGAGTCGGTGTaGCAAAATCCAAGACCAGCACTTTCTTGTCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: LRDPIWSQEESV*QNPRPALSCQI Trigger: AATTTGACAAGAAAGTGCTGGTCTTGGATTTTGTCACACCGACTCCTCTTGGGACCAGATGGGGTCTCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 72 bp | GTGACAAAATCCAAGACCAGCACTTTCTTGTCAAATTaGGCTGCCTCCTTAGCTGCTGCCAGTCCTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTKSKTSTFLSN*AASLAAASPPE Trigger: CTCAGGAGGACTGGCAGCAGCTAAGGAGGCAGCCAAATTTGACAAGAAAGTGCTGGTCTTGGATTTTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 72 bp | GGAGTCGGTGTGACAAAATCCAAGACCAGCACTTTCTaGTCAAATTTGGCTGCCTCCTTAGCTGCTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GVGVTKSKTSTF*SNLAASLAAAS Trigger: ACTGGCAGCAGCTAAGGAGGCAGCCAAATTTGACAAGAAAGTGCTGGTCTTGGATTTTGTCACACCGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 90 bp | GATACCATGTTCTTCCATGTGTTCACCGATTTTGTTGGCCATGTCTaGGTCAAATCCTCTAAGGAGAATGGACCGCACCATTACAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DTMFFHVFTDFVGHV*VKSSKENGPHHYSD Trigger: GTCACTGTAATGGTGCGGTCCATTCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGAACATGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 72 bp | TCTTCCATGTGTTCACCGATTTTGTTGGCCATGTCTTaGTCAAATCCTCTAAGGAGAATGGACCGCACCATT | + |
|
Preference number: 6 (lower is better) Translates to: SSMCSPILLAMS*SNPLRRMDRTI Trigger: AATGGTGCGGTCCATTCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 72 bp | TTCTTCCATGTGTTCACCGATTTTGTTGGCCATGTCTaGGTCAAATCCTCTAAGGAGAATGGACCGCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: FFHVFTDFVGHV*VKSSKENGPHH Trigger: ATGGTGCGGTCCATTCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CCA 72 bp | GCCTGGTGTTCCTGCTTCGATCTGTTCAATTTTCGTTaGGACGAACTGCCTTATAAACTTGATACCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AWCSCFDLFNFR*DELPYKLDTMF Trigger: GAACATGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAAAATTGAACAGATCGAAGCAGGAACACCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 90 bp | CTTATAAACTTGATACCATGTTCTTCCATGTGTTCACCGATTTTGTaGGCCATGTCTTGGTCAAATCCTCTAAGGAGAATGGACCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: LINLIPCSSMCSPIL*AMSWSNPLRRMDRT Trigger: GGTGCGGTCCATTCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGAACATGGTATCAAGTTTATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 90 bp | TGCCTTATAAACTTGATACCATGTTCTTCCATGTGTTCACCGATTTaGTTGGCCATGTCTTGGTCAAATCCTCTAAGGAGAATGGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: CLINLIPCSSMCSPI*LAMSWSNPLRRMDR Trigger: GCGGTCCATTCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGAACATGGTATCAAGTTTATAAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
||
| CDS CAA 90 bp | GCTTCGATCTGTTCAATTTTCGTTGGGACGAACTGCCTTATAAACTaGATACCATGTTCTTCCATGTGTTCACCGATTTTGTTGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ASICSIFVGTNCLIN*IPCSSMCSPILLAM Trigger: CATGGCCAACAAAATCGGTGAACACATGGAAGAACATGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAAAATTGAACAGATCGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| CDS GCA 72 bp | CCTGCTTCGATCTGTTCAATTTTCGTTGGGACGAACTaGCTTATAAACTTGATACCATGTTCTTCCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: PASICSIFVGTN*LINLIPCSSMC Trigger: ACACATGGAAGAACATGGTATCAAGTTTATAAGGCAGTTCGTCCCAACGAAAATTGAACAGATCGAAGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| CDS CCA 72 bp | ACAACAGCCATATTCCAAAGGAGTAAATACAGTCGTTaGGACATTGTCATAGTCACATTTGACATTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TTAIFQRSKYSR*DIVIVTFDIGA Trigger: GGCTCCAATGTCAAATGTGACTATGACAATGTCCCAACGACTGTATTTACTCCTTTGGAATATGGCTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| CDS CAA 72 bp | TTGATACCATGTTCTTCCATGTGTTCACCGATTTTGTaGGCCATGTCTTGGTCAAATCCTCTAAGGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: LIPCSSMCSPIL*AMSWSNPLRRM Trigger: CATTCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGAACATGGTATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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| CDS CAA 72 bp | AACTTGATACCATGTTCTTCCATGTGTTCACCGATTTaGTTGGCCATGTCTTGGTCAAATCCTCTAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: NLIPCSSMCSPI*LAMSWSNPLRR Trigger: TCTCCTTAGAGGATTTGACCAAGACATGGCCAACAAAATCGGTGAACACATGGAAGAACATGGTATCAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020484.9 ENSMUST00000219368.3 ENSMUST00000219442.3 ENSMUST00000219962.3 |
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