Pregenerated sensors for TXNL4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031723Ensembl transcript IDs: ENSMUST00000034159.8, ENSMUST00000178445.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTGGCAACAAGGCCCTTGCTGCCCAGCAGGCCACAAGCGGCCTaGCCACGGCCCTCCAGCTCTGTACCTGCTCTCATTCCAGAGCGA | + |
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Preference number: 1 (lower is better) Translates to: LLATRPLLPSRPQAA*PRPSSSVPALIPER Trigger: TCGCTCTGGAATGAGAGCAGGTACAGAGCTGGAGGGCCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCCAGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 90 bp | CAGCAGGCCACAAGCGGCCTGGCCACGGCCCTCCAGCTCTGTACCTaGTCTCATTCCAGAGCGACAGGGACAACCACTCCCATAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: QQATSGLATALQLCT*SHSRATGTTTPIRL Trigger: AAGCCTTATGGGAGTGGTTGTCCCTGTCGCTCTGGAATGAGAGCAGGTACAGAGCTGGAGGGCCGTGGCCAGGCCGCTTGTGGCCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 90 bp | GCCATAGCCCCGTGCATCCTAAGGAGGTGGTGGGAAAAGGTTCTCTaGCCATCCCTGAAGCAGCTCTCAGCTTTGGGCAGAGGACACGGA | + |
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Preference number: 1 (lower is better) Translates to: AIAPCILRRWWEKVL*PSLKQLSALGRGHG Trigger: TCCGTGTCCTCTGCCCAAAGCTGAGAGCTGCTTCAGGGATGGGCAGAGAACCTTTTCCCACCACCTCCTTAGGATGCACGGGGCTATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR CCA 90 bp | GTGTCCAGGGTGGCTGCCATAGCCCCGTGCATCCTAAGGAGGTGGTaGGAAAAGGTTCTCTGCCCATCCCTGAAGCAGCTCTCAGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: VSRVAAIAPCILRRW*EKVLCPSLKQLSAL Trigger: CAAAGCTGAGAGCTGCTTCAGGGATGGGCAGAGAACCTTTTCCCACCACCTCCTTAGGATGCACGGGGCTATGGCAGCCACCCTGGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR CCA 90 bp | TGCTGTGAGGCTCTCAGGGAAGGGACGCTCAGGCATCCTGATTCTTaGAGCACTGGGGCTGCTGCAAAAGGGCTGCTGATTACAGACACC | + |
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Preference number: 1 (lower is better) Translates to: CCEALREGTLRHPDS*STGAAAKGLLITDT Trigger: GGTGTCTGTAATCAGCAGCCCTTTTGCAGCAGCCCCAGTGCTCCAAGAATCAGGATGCCTGAGCGTCCCTTCCCTGAGAGCCTCACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 90 bp | ATAAACGGAAGTCACGAACAGGCACCACTTGGGCTCCTGCCTCACTaGTGTGAGGCTCTCAGGGAAGGGACGCTCAGGCATCCTGATTCT | + |
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Preference number: 1 (lower is better) Translates to: INGSHEQAPLGLLPH*CEALREGTLRHPDS Trigger: AGAATCAGGATGCCTGAGCGTCCCTTCCCTGAGAGCCTCACAGCAGTGAGGCAGGAGCCCAAGTGGTGCCTGTTCGTGACTTCCGTTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR TCA 90 bp | CTTACTTCCCAAACTTGTTGTTTAAGCTCAAGCCGTGCTGGATGGTaGAGAGCCACACTTTTCTCCTGGCAATCAATGGCCGGATGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LTSQTCCLSSSRAGW*RATLFSWQSMAGWL Trigger: GAGCCATCCGGCCATTGATTGCCAGGAGAAAAGTGTGGCTCTTCACCATCCAGCACGGCTTGAGCTTAAACAACAAGTTTGGGAAGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178445.2 |
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| 3UTR TCA 90 bp | CTTACTTCCCAAACTTGTTGTTTAAGCTCAAGCCGTGCTGGATGGTaGAGAGCCACACTTTTCTCCTGGCAATCAATGGCCGGATGGCTA | + |
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Preference number: 1 (lower is better) Translates to: LTSQTCCLSSSRAGW*RATLFSWQSMAGWL Trigger: TAGCCATCCGGCCATTGATTGCCAGGAGAAAAGTGTGGCTCTTCACCATCCAGCACGGCTTGAGCTTAAACAACAAGTTTGGGAAGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGGGAAAAGGTTCTCTGCCCATCCCTGAAGCAGCTCTCAGCTTTGGGCAGAATGGGTGGTGGCAGTaGTTTCTGGGGAGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VVGKGSLPIPEAALSFGQNGWWQ*FLGSSV Trigger: GACAGAGCTCCCCAGAAAGCACTGCCACCACCCATT...CTGCCCAAAGCTGAGAGCTGCTTCAGGGATGGGCAGAGAACCTTTTCCCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTGCCCAGCAGGCCACAAGCGGCCTGGCCACGGCCCTCCAGCTCTGTACCAACCTGATATCCTTTTaGTCTTTAGTCCTTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LAAQQATSGLATALQLCTNLISF*SLVLEV Trigger: TACCTCAAGGACTAAAGACCAAAAGGATATCAGGTT...GGTACAGAGCTGGAGGGCCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCAGGGTGGCTGCCATAGCCCCGTGCATCCTAAGGAGGTGGTGGGAAAAGACGTGTGCACAAACATaGCAGAGCAAGCTGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VSRVAAIAPCILRRWWEKTCAQT*QSKLFS Trigger: TGAGAACAGCTTGCTCTGCCATGTTTGTGCACACGT...CTTTTCCCACCACCTCCTTAGGATGCACGGGGCTATGGCAGCCACCCTGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR CAA 90 bp | TGGTGGGAAAAGGTTCTCTGCCCATCCCTGAAGCAGCTCTCAGCTTaGGGCAGAGGACACGGAAAACCCAAACCATCTTCTTTCTGCGCC | + |
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Preference number: 2 (lower is better) Translates to: WWEKVLCPSLKQLSA*GRGHGKPKPSSFCA Trigger: GGCGCAGAAAGAAGATGGTTTGGGTTTTCCGTGTCCTCTGCCCAAAGCTGAGAGCTGCTTCAGGGATGGGCAGAGAACCTTTTCCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR GCA 90 bp | GACAAAGACCTTTTATTCCACCATAGGGATGTGGAGGAACATTTATTGTTCACCGGGCTCCTGCCTCACTaGTGTGAGGCTCTCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: DKDLLFHHRDVEEHLLFTGLLPH*CEALRE Trigger: TTCCCTGAGAGCCTCACAGCAGTGAGGCAGGAGCCC...GGTGAACAATAAATGTTCCTCCACATCCCTATGGTGGAATAAAAGGTCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR GCA 90 bp | GACAAAGACCTTTTATTCCACCATAGGGATGTGGAGGAACATTTATTGTTCACCCACCACTTGGGCTCCTaGCTCACTGCTGTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: DKDLLFHHRDVEEHLLFTHHLGS*LTAVRL Trigger: GAGCCTCACAGCAGTGAGGCAGGAGCCCAAGTGGTG...GGTGAACAATAAATGTTCCTCCACATCCCTATGGTGGAATAAAAGGTCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGGATGTGGAGGAACATTTATTGTTCACCTAGGACTTCAGTAGCATTAGGGAAACCATCTTCTTTCTaGGCCCCGTCTGCCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: IGMWRNIYCSPRTSVALGKPSSF*APSARF Trigger: GAATCTGGCAGACGGGGCGCAGAAAGAAGATGGTTT...CCCTAATGCTACTGAAGTCCTAGGTGAACAATAAATGTTCCTCCACATCCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAAGACCTTTTATTCCACCATAGGGATGTGGAGGAACATTTATTGTTCACCAAGAGAACGGAGGCATaGGGGAGAACGTGTGCACAA | + |
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Preference number: 2 (lower is better) Translates to: DKDLLFHHRDVEEHLLFTKRTEA*GRTCAQ Trigger: TTGTGCACACGTTCTCCCCCATGCCTCCGTTCTCTT...GGTGAACAATAAATGTTCCTCCACATCCCTATGGTGGAATAAAAGGTCTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGGATGTGGAGGAACATTTATTGTTCACCTAGGACTTCAGTAGCATTAGGGATCCTAAGGAGGTGGTaGGAAAAGGTTCTCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: IGMWRNIYCSPRTSVALGILRRW*EKVLCP Trigger: TGGGCAGAGAACCTTTTCCCACCACCTCCTTAGGAT...CCCTAATGCTACTGAAGTCCTAGGTGAACAATAAATGTTCCTCCACATCCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | GCACACCTGGGCCTCTGCTGGCAACAAGGCCCTTGCTaGCCAGCAGGCCACAAGCGGCCTGGCCACGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: AHLGLCWQQGPC*PAGHKRPGHGP Trigger: AGGGCCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCCAGCAGAGGCCCAGGTGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | CCTGCACACCTGGGCCTCTGCTGGCAACAAGGCCCTTaGTGCCCAGCAGGCCACAAGCGGCCTGGCCACGGC | + |
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Preference number: 3 (lower is better) Translates to: PAHLGLCWQQGP*CPAGHKRPGHG Trigger: GCCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCCAGCAGAGGCCCAGGTGTGCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR CCA 72 bp | ACAAGGCCCTTGCTGCCCAGCAGGCCACAAGCGGCCTaGCCACGGCCCTCCAGCTCTGTACCTGCTCTCATT | + |
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Preference number: 3 (lower is better) Translates to: TRPLLPSRPQAA*PRPSSSVPALI Trigger: AATGAGAGCAGGTACAGAGCTGGAGGGCCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | ACAAGCGGCCTGGCCACGGCCCTCCAGCTCTGTACCTaGTCTCATTCCAGAGCGACAGGGACAACCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: TSGLATALQLCT*SHSRATGTTTP Trigger: GGGAGTGGTTGTCCCTGTCGCTCTGGAATGAGAGCAGGTACAGAGCTGGAGGGCCGTGGCCAGGCCGCTTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCCGTGCATCCTAAGGAGGTGGTGGGAAAAGGTTCTCTGCCCATCCCTGAAGCTGGCAACAAGGCCCTaGCTGCCCAGCAGGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: APCILRRWWEKVLCPSLKLATRP*LPSRPQ Trigger: TTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCCAG...CTTCAGGGATGGGCAGAGAACCTTTTCCCACCACCTCCTTAGGATGCACGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR CAA 90 bp | ACGGAGGCATGGGGGAGAACGTGTGCACAAACATGGCAGAGCAAGCTGTTCTCAACGAACAGGCACCACTaGGGCTCCTGCCTCACTGCT | + |
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Preference number: 3 (lower is better) Translates to: TEAWGRTCAQTWQSKLFSTNRHH*GSCLTA Trigger: AGCAGTGAGGCAGGAGCCCAAGTGGTGCCTGTTCGT...TGAGAACAGCTTGCTCTGCCATGTTTGTGCACACGTTCTCCCCCATGCCTCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | TTCATCCACGTGTCCAGGGTGGCTGCCATAGCCCCGTaGATCCTAAGGAGGTGGTGGGAAAAGGTTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: FIHVSRVAAIAP*ILRRWWEKVLC Trigger: GCAGAGAACCTTTTCCCACCACCTCCTTAGGATGCACGGGGCTATGGCAGCCACCCTGGACACGTGGATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | CCGTGCATCCTAAGGAGGTGGTGGGAAAAGGTTCTCTaGCCATCCCTGAAGCAGCTCTCAGCTTTGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: PCILRRWWEKVL*PSLKQLSALGR Trigger: TCTGCCCAAAGCTGAGAGCTGCTTCAGGGATGGGCAGAGAACCTTTTCCCACCACCTCCTTAGGATGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | GAATCTCGAAGTTTTCATCCACGTGTCCAGGGTGGCTaGCATAGCCCCGTGCATCCTAAGGAGGTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ESRSFHPRVQGG*HSPVHPKEVVG Trigger: TCCCACCACCTCCTTAGGATGCACGGGGCTATGGCAGCCACCCTGGACACGTGGATGAAAACTTCGAGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | GGCAGAGGACACGGAAAACCCAAACCATCTTCTTTCTaGGCCCCGTCTGCCAGATTCAGGTCGTGGTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: GRGHGKPKPSSF*APSARFRSWFH Trigger: GTGAAACCACGACCTGAATCTGGCAGACGGGGCGCAGAAAGAAGATGGTTTGGGTTTTCCGTGTCCTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | ACTTTTCTCCTGGCAATCAATGGCCGGATGGCTCTTTaGTCAGGCAGTGAACATGTCTCTGAAGGACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TFLLAINGRMAL*SGSEHVSEGLQ Trigger: CTGGAGTCCTTCAGAGACATGTTCACTGCCTGAGCAAAGAGCCATCCGGCCATTGATTGCCAGGAGAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178445.2 |
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| 3UTR GCA 72 bp | AAAAGGGCTGCTGATTACAGACACCGCAAACCTCTTTaGTCAGGCAGTGAACATGTCTCTGAAGGACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: KRAADYRHRKPL*SGSEHVSEGLQ Trigger: CTGGAGTCCTTCAGAGACATGTTCACTGCCTGAGCAAAGAGGTTTGCGGTGTCTGTAATCAGCAGCCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR GCA 72 bp | CCTTACTTCCCAAACTTGTTGTTTAAGCTCAAGCCGTaGTGGATGGTGAAGAGCCACACTTTTCTCCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: PYFPNLLFKLKP*WMVKSHTFLLA Trigger: TGCCAGGAGAAAAGTGTGGCTCTTCACCATCCAGCACGGCTTGAGCTTAAACAACAAGTTTGGGAAGTAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| 3UTR CCA 72 bp | TCTTCTTTCTGCGCCCCGTCTGCCAGATTCAGGTCGTaGTTTCACTTTCCCCTAAAGGACAAGCTTAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: SSFCAPSARFRS*FHFPLKDKLRN Trigger: ATTTCTAAGCTTGTCCTTTAGGGGAAAGTGAAACCACGACCTGAATCTGGCAGACGGGGCGCAGAAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTTTTGGTCTTTAGTCCTTGAGGTAATGGGTGGTGGCAGTGCTTTCTGGGGACCTTACTTCCCAAACTaGTTGTTTAAGCTCAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: SFWSLVLEVMGGGSAFWGPYFPN*LFKLKP Trigger: CGGCTTGAGCTTAAACAACAAGTTTGGGAAGTAAGG...TCCCCAGAAAGCACTGCCACCACCCATTACCTCAAGGACTAAAGACCAAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCACTTTCCCCTAAAGGACAAGCTTAGAAATAAGCAGCTGATGCCAGGGTTGCCTTACTTCCCAAACTaGTTGTTTAAGCTCAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: FHFPLKDKLRNKQLMPGLPYFPN*LFKLKP Trigger: CGGCTTGAGCTTAAACAACAAGTTTGGGAAGTAAGG...CAACCCTGGCATCAGCTGCTTATTTCTAAGCTTGTCCTTTAGGGGAAAGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR CCA 72 bp | AGTTGGACAAAGACCTTTTATTCCACCATAGGGATGTaGAGGAACATTTATTGTTCACCTAGGACTTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: SWTKTFYSTIGM*RNIYCSPRTSV Trigger: TACTGAAGTCCTAGGTGAACAATAAATGTTCCTCCACATCCCTATGGTGGAATAAAAGGTCTTTGTCCAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| 3UTR CAA 72 bp | TCCTGCACACCTGGGCCTCTGCTGGCAACAAGGCCCTaGCTGCCCAGCAGGCCACAAGCGGCCTGGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: SCTPGPLLATRP*LPSRPQAAWPR Trigger: CCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCCAGCAGAGGCCCAGGTGTGCAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR TCA 90 bp | GACTCCAGACCACAGGCCCTCTGGCTTCAGGCCCCGTCTCAACCTGTGCTTCTCTCTCCGCAGTGCTTTTaGTCGCCTGGTCTACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: DSRPQALWLQAPSQPVLLSPQCF*SPGLLL Trigger: AAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGA...GAGAAGCACAGGTTGAGACGGGGCCTGAAGCCAGAGGGCCTGTGGTCTGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR GCA 90 bp | GAGCCACACTTTTCTCCTGGCAATCAATGGCCGGATGGCTCTTTGCTCAGGCAGAGAATATCATCCAGCTaGAGACAGACGGGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: EPHFSPGNQWPDGSLLRQRISSS*RQTGSS Trigger: CGAGGACCCCGTCTGTCTGCAGCTGGATGATATTCT...CTGCCTGAGCAAAGAGCCATCCGGCCATTGATTGCCAGGAGAAAAGTGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178445.2 |
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| CDS-3UTR GCA 90 bp | AGTCAAGATAAACGGAAGTCACGAACAGGCACCACTTGGGCTCCTGCCTCACTGAGAATATCATCCAGCTaGAGACAGACGGGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SQDKRKSRTGTTWAPASLRISSS*RQTGSS Trigger: CGAGGACCCCGTCTGTCTGCAGCTGGATGATATTCT...CAGTGAGGCAGGAGCCCAAGTGGTGCCTGTTCGTGACTTCCGTTTATCTTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CCA 90 bp | TGCTCAGGCAGTGAACATGTCTCTGAAGGACTCCAGACCACAGGCCCTCTGGCTCTACTTCTTTCTTGCTaGTCAGTTTGGGCAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CSGSEHVSEGLQTTGPLALLLSC*SVWARG Trigger: TCCTCTTGCCCAAACTGACCAGCAAGAAAGAAGTAG...AGCCAGAGGGCCTGTGGTCTGGAGTCCTTCAGAGACATGTTCACTGCCTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR GCA 90 bp | CAAGCCGTGCTGGATGGTGAAGAGCCACACTTTTCTCCTGGCAATCAATGGCCGGGTCTACTTCTTTCTTaGTGGTCAGTTTGGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: QAVLDGEEPHFSPGNQWPGLLLS*WSVWAR Trigger: TCTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACC...CGGCCATTGATTGCCAGGAGAAAAGTGTGGCTCTTCACCATCCAGCACGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR CCA 90 bp | TGCTCAGGCAGTGAACATGTCTCTGAAGGACTCCAGACCACAGGCCCTCTGGCTGGATCAATAGGACTCTaGACAATAAGTTTTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: CSGSEHVSEGLQTTGPLAGSIGL*TISFPL Trigger: GAGGGGAAAACTTATTGTCCAGAGTCCTATTGATCC...AGCCAGAGGGCCTGTGGTCTGGAGTCCTTCAGAGACATGTTCACTGCCTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR TCA 90 bp | AACAACCTGATATCCTTTTGGTCTTTAGTCCTTGAGGTAATGGGTGGTGGCAGTCGTCCCTCCCAAACCTaGGAACCAACACCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: NNLISFWSLVLEVMGGGSRPSQT*EPTPSP Trigger: CGGAGAAGGTGTTGGTTCTCAGGTTTGGGAGGGACG...ACTGCCACCACCCATTACCTCAAGGACTAAAGACCAAAAGGATATCAGGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR TCA 90 bp | CCCTCAAGGCGTTTCTCCCTTAACAACCTGATATCCTTTTGGTCTTTAGTCCTTCGTCCCTCCCAAACCTaGGAACCAACACCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PSRRFSLNNLISFWSLVLRPSQT*EPTPSP Trigger: CGGAGAAGGTGTTGGTTCTCAGGTTTGGGAGGGACG...AAGGACTAAAGACCAAAAGGATATCAGGTTGTTAAGGGAGAAACGCCTTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| 3UTR CAA 72 bp | TTTCTGGGGAGCTCTGTCCCTTACTTCCCAAACTTGTaGTTTAAGCTCAAGCCGTGCTGGATGGTGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FLGSSVPYFPNL*FKLKPCWMVKS Trigger: GCTCTTCACCATCCAGCACGGCTTGAGCTTAAACAACAAGTTTGGGAAGTAAGGGACAGAGCTCCCCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGGTTGGGTCACATTCTTCAAAAGCCCTTGGATGGAATCGCAAACCCCTCGGTCTACTTCTTTCTTaGTGGTCAGTTTGGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PEVGSHSSKALGWNRKPLGLLLS*WSVWAR Trigger: TCTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACC...GAGGGGTTTGCGATTCCATCCAAGGGCTTTTGAAGAATGTGACCCAACCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR TCA 90 bp | GCCAGATTCAGGTCGTGGTTTCACTTTCCCCTAAAGGACAAGCTTAGAAATAAGTCTCCGCAGTGCTTTTaGTCGCCTGGTCTACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ARFRSWFHFPLKDKLRNKSPQCF*SPGLLL Trigger: AAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGA...CTTATTTCTAAGCTTGTCCTTTAGGGGAAAGTGAAACCACGACCTGAATCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CCA 90 bp | TTTCACTTTCCCCTAAAGGACAAGCTTAGAAATAAGCAGCTGATGCCAGGGTTGAGAGGAGGTCATATTTaGGCACGTTCTTGGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: FHFPLKDKLRNKQLMPGLRGGHI*ARSWDQ Trigger: TTGATCCCAAGAACGTGCCCAAATATGACCTCCTCT...CAACCCTGGCATCAGCTGCTTATTTCTAAGCTTGTCCTTTAGGGGAAAGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CCA 90 bp | GCCAGATTCAGGTCGTGGTTTCACTTTCCCCTAAAGGACAAGCTTAGAAATAAGGGATCAATAGGACTCTaGACAATAAGTTTTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: ARFRSWFHFPLKDKLRNKGSIGL*TISFPL Trigger: GAGGGGAAAACTTATTGTCCAGAGTCCTATTGATCC...CTTATTTCTAAGCTTGTCCTTTAGGGGAAAGTGAAACCACGACCTGAATCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CCA 90 bp | GACAAAGACCTTTTATTCCACCATAGGGATGTGGAGGAACATTTATTGTTCACCCTACTTCTTTCTTGCTaGTCAGTTTGGGCAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: DKDLLFHHRDVEEHLLFTLLLSC*SVWARG Trigger: TCCTCTTGCCCAAACTGACCAGCAAGAAAGAAGTAG...GGTGAACAATAAATGTTCCTCCACATCCCTATGGTGGAATAAAAGGTCTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CAA 90 bp | GGCAACAAGGCCCTTGCTGCCCAGCAGGCCACAAGCGGCCTGGCCACGGCCCTCTATTTGGGCACGTTCTaGGGATCAATAGGACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GNKALAAQQATSGLATALYLGTF*GSIGLW Trigger: CCAGAGTCCTATTGATCCCAAGAACGTGCCCAAATA...GAGGGCCGTGGCCAGGCCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CAA 90 bp | CACCTGGGCCTCTGCTGGCAACAAGGCCCTTGCTGCCCAGCAGGCCACAAGCGGGGTCGGCTGAAGTTTTaGAGAGAATATCATCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HLGLCWQQGPCCPAGHKRGRLKF*REYHPA Trigger: AGCTGGATGATATTCTCTCAAAAACTTCAGCCGACC...CCGCTTGTGGCCTGCTGGGCAGCAAGGGCCTTGTTGCCAGCAGAGGCCCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CAA 90 bp | GTGTCCAGGGTGGCTGCCATAGCCCCGTGCATCCTAAGGAGGTGGTGGGAAAAGTGGTCTACTTCTTTCTaGCTGGTCAGTTTGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: VSRVAAIAPCILRRWWEKWSTSF*LVSLGK Trigger: CTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCA...CTTTTCCCACCACCTCCTTAGGATGCACGGGGCTATGGCAGCCACCCTGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034159.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCCTCTGGCTTCAGGCCCCGTCTCAACCTGTGCTTCTCTCAGCTCCAACATGGTCTACTTCTTTCTaGCTGGTCAGTTTGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: QALWLQAPSQPVLLSAPTWSTSF*LVSLGK Trigger: CTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCA...TGTTGGAGCTGAGAGAAGCACAGGTTGAGACGGGGCCTGAAGCCAGAGGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR CAA 90 bp | TTTGCTCAGGCAGTGAACATGTCTCTGAAGGACTCCAGACCACAGGCCCTCTGGTTCTCCGCAGTGCTTTaGATCGCCTGGTCTACTTCT | + |
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Preference number: 5 (lower is better) Translates to: FAQAVNMSLKDSRPQALWFSAVL*IAWSTS Trigger: AGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAA...CCAGAGGGCCTGTGGTCTGGAGTCCTTCAGAGACATGTTCACTGCCTGAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR CAA 90 bp | GACCACAGGCCCTCTGGCTTCAGGCCCCGTCTCAACCTGTGCTTCTCTCAGCTCTCTATGAAGTCTTGTTaGGTTTTGAAGCTTCCTACG | + |
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Preference number: 5 (lower is better) Translates to: DHRPSGFRPRLNLCFSQLSMKSC*VLKLPT Trigger: CGTAGGAAGCTTCAAAACCAAACAAGACTTCATAGA...GAGCTGAGAGAAGCACAGGTTGAGACGGGGCCTGAAGCCAGAGGGCCTGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR CAA 90 bp | TGCTCAGGCAGTGAACATGTCTCTGAAGGACTCCAGACCACAGGCCCTCTGGCTTATTTGGGCACGTTCTaGGGATCAATAGGACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: CSGSEHVSEGLQTTGPLAYLGTF*GSIGLW Trigger: CCAGAGTCCTATTGATCCCAAGAACGTGCCCAAATA...AGCCAGAGGGCCTGTGGTCTGGAGTCCTTCAGAGACATGTTCACTGCCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR CAA 90 bp | CAGGCCCTCTGGCTTCAGGCCCCGTCTCAACCTGTGCTTCTCTCAGCTCCAACATCTATGAAGTCTTGTTaGGTTTTGAAGCTTCCTACG | + |
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Preference number: 5 (lower is better) Translates to: QALWLQAPSQPVLLSAPTSMKSC*VLKLPT Trigger: CGTAGGAAGCTTCAAAACCAAACAAGACTTCATAGA...TGTTGGAGCTGAGAGAAGCACAGGTTGAGACGGGGCCTGAAGCCAGAGGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS CCA 90 bp | CCAAACCTGAGAACCAACACCTTCTCCGCAGTGCTTTTGATCGCCTaGTCTACTTCTTTCTTGCTGGTCAGTTTGGGCAAGAGGAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: PNLRTNTFSAVLLIA*STSFLLVSLGKRKL Trigger: GAGCTTCCTCTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAAGGTGTTGGTTCTCAGGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS-3UTR CAA 90 bp | AACAACCTGATATCCTTTTGGTCTTTAGTCCTTGAGGTAATGGGTGGTGGCAGTTTCTCCGCAGTGCTTTaGATCGCCTGGTCTACTTCT | + |
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Preference number: 5 (lower is better) Translates to: NNLISFWSLVLEVMGGGSFSAVL*IAWSTS Trigger: AGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAA...ACTGCCACCACCCATTACCTCAAGGACTAAAGACCAAAAGGATATCAGGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS GCA 72 bp | AGGTCGGCTGAAGTTTTTGAGAGAATATCATCCAGCTaGAGACAGACGGGGTCCTCGTCCCTCCCAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: RSAEVFERISSS*RQTGSSSLPNL Trigger: CAGGTTTGGGAGGGACGAGGACCCCGTCTGTCTGCAGCTGGATGATATTCTCTCAAAAACTTCAGCCGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS CAA 90 bp | TCGTCCCTCCCAAACCTGAGAACCAACACCTTCTCCGCAGTGCTTTaGATCGCCTGGTCTACTTCTTTCTTGCTGGTCAGTTTGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SSLPNLRTNTFSAVL*IAWSTSFLLVSLGK Trigger: CTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAAGGTGTTGGTTCTCAGGTTTGGGAGGGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS CCA 72 bp | AGAACCAACACCTTCTCCGCAGTGCTTTTGATCGCCTaGTCTACTTCTTTCTTGCTGGTCAGTTTGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RTNTFSAVLLIA*STSFLLVSLGK Trigger: CTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAAGGTGTTGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS CAA 72 bp | CCAAACCTGAGAACCAACACCTTCTCCGCAGTGCTTTaGATCGCCTGGTCTACTTCTTTCTTGCTGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PNLRTNTFSAVL*IAWSTSFLLVS Trigger: ACTGACCAGCAAGAAAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAAGGTGTTGGTTCTCAGGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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| CDS CAA 90 bp | CCTCATCGCTCCCCGGTAGATGACTTCAATCAAATCTATGAAGTCTaGTTTGGTTTTGAAGCTTCCTACGAATTTAGTGTGATCCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PHRSPVDDFNQIYEV*FGFEASYEFSVIRR Trigger: TCTCCGGATCACACTAAATTCGTAGGAAGCTTCAAAACCAAACAAGACTTCATAGATTTGATTGAAGTCATCTACCGGGGAGCGATGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034159.8 ENSMUST00000178445.2 |
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