Pregenerated sensors for TXNL4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057130Ensembl transcript IDs: ENSMUST00000025464.8, ENSMUST00000145963.9
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAAAGACTGGGATAACGTGTGCCCAATCCAAGGTTTACCAAGGATaGCCAACAACCTCCAGAACCAAGGGGCTGCTGCAGATGGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: AKTGITCAQSKVYQG*PTTSRTKGLLQMAH Trigger: GTGGGCCATCTGCAGCAGCCCCTTGGTTCTGGAGGTTGTTGGCCATCCTTGGTAAACCTTGGATTGGGCACACGTTATCCCAGTCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 90 bp | GCCAGGCAATTGCTTTTTCGTAGTTGTGTTTTGAGCTCGGCTGCCTaGCCTCAGCCAGCAGCAGGAGTGAATCCTACCTGGATCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: ARQLLFRSCVLSSAA*PQPAAGVNPTWITV Trigger: CACTGTGATCCAGGTAGGATTCACTCCTGCTGCTGGCTGAGGCCAGGCAGCCGAGCTCAAAACACAACTACGAAAAAGCAATTGCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR TCA 90 bp | TCTCAAAGTCAGGCCTGGAACTCAAGCAGGTCAGGAAGCAAGAGCTaGTGCAGAGGCCATGGAGGGATGGTCTTTACTGGCTTGTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: SQSQAWNSSRSGSKS*CRGHGGMVFTGLFP Trigger: GGGAAACAAGCCAGTAAAGACCATCCCTCCATGGCCTCTGCATCAGCTCTTGCTTCCTGACCTGCTTGAGTTCCAGGCCTGACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR GCA 90 bp | TGGGGCAGGGGTACTGAGGCGCTCGTCCAGAGTCGGCTCCTGGTATaGTCATCTTTCTCTTCTGAGTTTGTGTTTAGAGATGAGAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: WGRGTEALVQSRLLV*SSFSSEFVFRDERV Trigger: TACCCTCTCATCTCTAAACACAAACTCAGAAGAGAAAGATGAGCATACCAGGAGCCGACTCTGGACGAGCGCCTCAGTACCCCTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR GCA 90 bp | GGAGGGATGGTCTTTACTGGCTTGTTTCCCCTGGCTTGCTCAGCTTaGTTTCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: GGMVFTGLFPLACSA*FLIEPKTTSPGMAP Trigger: TGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGACCATCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR GCA 90 bp | AGAGGCCATGGAGGGATGGTCTTTACTGGCTTGTTTCCCCTGGCTTaGTCAGCTTGCTTTCTTATAGAACCCAAGACTACCAGCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: RGHGGMVFTGLFPLA*SACFLIEPKTTSPG Trigger: CCCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGACCATCCCTCCATGGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 90 bp | AGCTCGGCTGCCTGGCCTCAGCCAGCAGCAGGAGTGAATCCTACCTaGATCACAGTGCTGTTTTATATGCTGAGAGAGATTAAGACTGGG | + |
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Preference number: 1 (lower is better) Translates to: SSAAWPQPAAGVNPT*ITVLFYMLREIKTG Trigger: CCCAGTCTTAATCTCTCTCAGCATATAAAACAGCACTGTGATCCAGGTAGGATTCACTCCTGCTGCTGGCTGAGGCCAGGCAGCCGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 90 bp | CAGGTTGACAGGAAACGCCTCTGGGAAGAAGCTTTCGGTCAGCCCTaGTATCCATCACCATCAGATCGACACCAGAAGTGGTTCCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: QVDRKRLWEEAFGQP*YPSPSDRHQKWFLE Trigger: TTCCAGGAACCACTTCTGGTGTCGATCTGATGGTGATGGATACCAGGGCTGACCGAAAGCTTCTTCCCAGAGGCGTTTCCTGTCAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR GCA 90 bp | ATGTCTGGGGTAGTTTGCTTGACAGCTCTGGCAACCGCTCGAAGATaGAAAACCAGACAGCCTCCTGGGACAAACACTGGGAGTAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: MSGVVCLTALATARR*KTRQPPGTNTGSKD Trigger: GTCTTTACTCCCAGTGTTTGTCCCAGGAGGCTGTCTGGTTTTGCATCTTCGAGCGGTTGCCAGAGCTGTCAAGCAAACTACCCCAGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 90 bp | ATGCATGGGGCAGGGGTACTGAGGCGCTCGTCCAGAGTCGGCTCCTaGTATGCTCATCTTTCTCTTCTGAGTTTGTGTTTAGAGATGAGA | + |
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Preference number: 1 (lower is better) Translates to: MHGAGVLRRSSRVGS*YAHLSLLSLCLEMR Trigger: TCTCATCTCTAAACACAAACTCAGAAGAGAAAGATGAGCATACCAGGAGCCGACTCTGGACGAGCGCCTCAGTACCCCTGCCCCATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR GCA 90 bp | ACTTCTGATCTAGATGTAGAACTCTCAGCTCCTTCTCCAGAACCATaGCTGCCAACACGCTGCCATGCTTCCTGCCATGCTGGTAATGGA | + |
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Preference number: 1 (lower is better) Translates to: TSDLDVELSAPSPEP*LPTRCHASCHAGNG Trigger: TCCATTACCAGCATGGCAGGAAGCATGGCAGCGTGTTGGCAGGCATGGTTCTGGAGAAGGAGCTGAGAGTTCTACATCTAGATCAGAAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR GCA 90 bp | CATTGCTCACAGGCCACACTAGACCCCTCCAGGGAGCTCGTTTCCTaGATGAAAATGGCTCTGTCTACCTTGTGCAGACAATCTGTTACA | + |
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Preference number: 1 (lower is better) Translates to: HCSQATLDPSRELVS*MKMALSTLCRQSVT Trigger: TGTAACAGATTGTCTGCACAAGGTAGACAGAGCCATTTTCATGCAGGAAACGAGCTCCCTGGAGGGGTCTAGTGTGGCCTGTGAGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 90 bp | AAGAAACAAGAGGAAGCTGACGTAGATAAGGGGACTTGTGCTGGGTaGAATGAGGACCCTGCTTCCTTAGGAAGCAGGACACAGACATGC | + |
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Preference number: 1 (lower is better) Translates to: KKQEEADVDKGTCAG*NEDPASLGSRTQTC Trigger: GCATGTCTGTGTCCTGCTTCCTAAGGAAGCAGGGTCCTCATTCCACCCAGCACAAGTCCCCTTATCTACGTCAGCTTCCTCTTGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 90 bp | AGGAAGCAAGAGCTGATGCAGAGGCCATGGAGGGATGGTCTTTACTaGCTTGTTTCCCCTGGCTTGCTCAGCTTGCTTTCTTATAGAACC | + |
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Preference number: 1 (lower is better) Translates to: RKQELMQRPWRDGLY*LVSPGLLSLLSYRT Trigger: GGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGACCATCCCTCCATGGCCTCTGCATCAGCTCTTGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR TCA 90 bp | CATTGCAGCTCTGCATGTGAATCTGACTTTTTGCAAGCTAGGAACTaGATACTACCTCTATCACCAAGCGGCACCCCAAGCCAGGACTCA | + |
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Preference number: 1 (lower is better) Translates to: HCSSACESDFLQARN*ILPLSPSGTPSQDS Trigger: TGAGTCCTGGCTTGGGGTGCCGCTTGGTGATAGAGGTAGTATTCAGTTCCTAGCTTGCAAAAAGTCAGATTCACATGCAGAGCTGCAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR TCA 90 bp | AAGACTGGGTATTCTTATGGGTTATGTCACCCCAAATTAATATGTTaGTGGTTTAAGCCCAGAATCTCAGACCATGACCTCATTTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: KTGYSYGLCHPKLIC*WFKPRISDHDLIWS Trigger: ACTCCAAATGAGGTCATGGTCTGAGATTCTGGGCTTAAACCATCAACATATTAATTTGGGGTGACATAACCCATAAGAATACCCAGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCGTCCAGTGAGTGTTCGCCACTGCGTACGATGGAGATGCATGGGGCAGGGTTGAGCTCGGCTGCCTaGCCTCAGCCAGCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QASSECSPLRTMEMHGAGLSSAA*PQPAAG Trigger: TCCTGCTGCTGGCTGAGGCCAGGCAGCCGAGCTCAA...CCCTGCCCCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGTCCAGTGAGTGTTCGCCACTGCGTACGATGGAGATGCATGGGGCAGGGAGCAGGACACAGACATaGTGTGAGGAAGAGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QASSECSPLRTMEMHGAGSRTQT*CEEEWR Trigger: CCTCCACTCTTCCTCACAGCATGTCTGTGTCCTGCT...CCCTGCCCCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CAA 90 bp | AGGCGTGCCCTTGTTAGAGGAAGTCCGTCACTGTGGGGGTGGGCCTaGAGGCTCCCATGCTCAGGTTCCACCCAATACAGATGTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: RRALVRGSPSLWGWA*RLPCSGSTQYRCLI Trigger: GATGAGACATCTGTATTGGGTGGAACCTGAGCATGGGAGCCTCAAGGCCCACCCCCACAGTGACGGACTTCCTCTAACAAGGGCACGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR TCA 90 bp | TTGACAGGAAACGCCTCTGGGAAGAAGCTTTCGGTCAGCCCTGGTATCCATCACGAGGCTGTACAGAGGTaGGGTGGCCCCAGGCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LTGNASGKKLSVSPGIHHEAVQR*GGPRQG Trigger: ACCTTGCCTGGGGCCACCTCACCTCTGTACAGCCTC...GTGATGGATACCAGGGCTGACCGAAAGCTTCTTCCCAGAGGCGTTTCCTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCTGACCCTCCATCTGGTCCCTCACCTTTCTGGACTGTAACTATCCCACCAGAACCAAGGGGCTaGTGCAGATGGCCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: TVADPPSGPSPFWTVTIPPEPRG*CRWPTA Trigger: GGCTGTGGGCCATCTGCAGCAGCCCCTTGGTTCTGG...TGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGTCCAGTGAGTGTTCGCCACTGCGTACGATGGAGATGCATGGGGCAGGGCGGGTCCCTCCACATTaGCAGGAAGAGAAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: QASSECSPLRTMEMHGAGRVPPH*QEEKKQ Trigger: TTGTTTCTTCTCTTCCTGGCAATGTGGAGGGACCCG...CCCTGCCCCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CAA 90 bp | AGGAAGGGAAGCGCCGCCAGGCAATTGCTTTTTCGTAGTTGTGTTTaGAGCTCGGCTGCCTGGCCTCAGCCAGCAGCAGGAGTGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: RKGSAARQLLFRSCV*SSAAWPQPAAGVNP Trigger: AGGATTCACTCCTGCTGCTGGCTGAGGCCAGGCAGCCGAGCTCAAAACACAACTACGAAAAAGCAATTGCCTGGCGGCGCTTCCCTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCTGACCCTCCATCTGGTCCCTCACCTTTCTGGACTGTAACTATCCCATGTTTTGAGCTCGGCTaGCTGGCCTCAGCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TVADPPSGPSPFWTVTIPCFELG*LASASS Trigger: GCTGCTGGCTGAGGCCAGGCAGCCGAGCTCAAAACA...TGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGTCCAGTGAGTGTTCGCCACTGCGTACGATGGAGATGCATGGGGCAGGGAGTCGGCTCCTGGTATaGTCATCTTTCTCTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QASSECSPLRTMEMHGAGSRLLV*SSFSSE Trigger: CTCAGAAGAGAAAGATGAGCATACCAGGAGCCGACT...CCCTGCCCCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCTACAATGGGCCCGGGACTTGTGCTGGGTaGAATGAGGACCCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SYRTQDYQPRDGTTYNGPGTCAG*NEDPAS Trigger: GGAAGCAGGGTCCTCATTCCACCCAGCACAAGTCCC...GGGCCCATTGTAGGTGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CAA 90 bp | ACATGCTGTGAGGAAGAGTGGAGGAAGGGAAGCGCCGCCAGGCAATaGCTTTTTCGTAGTTGTGTTTTGAGCTCGGCTGCCTGGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TCCEEEWRKGSAARQ*LFRSCVLSSAAWPQ Trigger: CTGAGGCCAGGCAGCCGAGCTCAAAACACAACTACGAAAAAGCAATTGCCTGGCGGCGCTTCCCTTCCTCCACTCTTCCTCACAGCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCTGACCCTCCATCTGGTCCCTCACCTTTCTGGACTGTAACTATCCCACTGGGATTAAAGGCATaGGCCACCACGTCCGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TVADPPSGPSPFWTVTIPLGLKA*ATTSGF Trigger: GAAGCCGGACGTGGTGGCGCATGCCTTTAATCCCAG...TGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCTACAATGGGCCCCGCTGCCATGCTTCCTaGCATGCTGGTAATGGACTG | + |
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Preference number: 2 (lower is better) Translates to: SYRTQDYQPRDGTTYNGPRCHAS*HAGNGL Trigger: CAGTCCATTACCAGCATGGCAGGAAGCATGGCAGCG...GGGCCCATTGTAGGTGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGCTGACCCTCCATCTGGTCCCTCACCTTTCTGGACTGTAACTATCCCACTCCAGAACCATGCCTaGCAACACGCTGCCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: TVADPPSGPSPFWTVTIPLQNHA*QHAAML Trigger: AAGCATGGCAGCGTGTTGGCAGGCATGGTTCTGGAG...TGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGATCTGCCTACTTCTGCCTCCCACGTGCTGGTGTTAATTAAAGGCACGGCCCACAGCCTCAAATaGAATCCAGAACCCAGCCGC | + |
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Preference number: 2 (lower is better) Translates to: TRDLPTSASHVLVLIKGTAHSLK*NPEPSR Trigger: GCGGCTGGGTTCTGGATTCCATTTGAGGCTGTGGGC...CGTGCCTTTAATTAACACCAGCACGTGGGAGGCAGAAGTAGGCAGATCTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CAA 90 bp | TGGAGGGATGGTCTTTACTGGCTTGTTTCCCCTGGCTTGCTCAGCTaGCTTTCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACC | + |
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Preference number: 2 (lower is better) Translates to: WRDGLYWLVSPGLLS*LSYRTQDYQPRDGT Trigger: GGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGACCATCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGCTGACCCTCCATCTGGTCCCTCACCTTTCTGGACTGTAACTATCCCAGATGTCTCATCCTCCTaGATGCCTGCAGAGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TVADPPSGPSPFWTVTIPDVSSS*MPAERV Trigger: GACTCTCTCTGCAGGCATCCAGGAGGATGAGACATC...TGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCTACAATGGGCCCGCTTTCGGTCAGCCCTaGTATCCATCACCATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SYRTQDYQPRDGTTYNGPAFGQP*YPSPSD Trigger: ATCTGATGGTGATGGATACCAGGGCTGACCGAAAGC...GGGCCCATTGTAGGTGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | TTGACAGGAAACGCCTCTGGGAAGAAGCTTTCGGTCAGCCCTGGTATCCATCACTCTCATCCTCCTGGATaGCTGCAGAGAGAGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LTGNASGKKLSVSPGIHHSHPPG*LQRESD Trigger: ATCAGACTCTCTCTGCAGGCATCCAGGAGGATGAGA...GTGATGGATACCAGGGCTGACCGAAAGCTTCTTCCCAGAGGCGTTTCCTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAGATCTGCCTACTTCTGCCTCCCACGTGCTGGTGTTAATTAAAGGCACGATGTCTGGGGTAGTTTaGTTGACAGCTCTGGCAACC | + |
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Preference number: 2 (lower is better) Translates to: TRDLPTSASHVLVLIKGTMSGVV*LTALAT Trigger: GGTTGCCAGAGCTGTCAAGCAAACTACCCCAGACAT...CGTGCCTTTAATTAACACCAGCACGTGGGAGGCAGAAGTAGGCAGATCTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCTGCATGAAAATGGCTCTGTCTACCTTGTGCAGACAATCTGTTACACAGGAACCAAGGGGCTGCTaGAGATGGCCCACAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VSCMKMALSTLCRQSVTQEPRGC*RWPTAS Trigger: TGAGGCTGTGGGCCATCTGCAGCAGCCCCTTGGTTC...CTGTGTAACAGATTGTCTGCACAAGGTAGACAGAGCCATTTTCATGCAGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGCTGACCCTCCATCTGGTCCCTCACCTTTCTGGACTGTAACTATCCCACATGGGACCAGCCAATaGCCAATGAGGAAAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: TVADPPSGPSPFWTVTIPHGTSQ*PMRKAK Trigger: TTTAGCTTTCCTCATTGGCCATTGGCTGGTCCCATG...TGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CAA 90 bp | TACTACCTCTATCACCAAGCGGCACCCCAAGCCAGGACTCATGTTTaGGTTCATCTGACGAGTGCGTTTATTTGTAGGTCAGACATCTGC | + |
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Preference number: 2 (lower is better) Translates to: YYLYHQAAPQARTHV*VHLTSAFICRSDIC Trigger: GCAGATGTCTGACCTACAAATAAACGCACTCGTCAGATGAACCAAAACATGAGTCCTGGCTTGGGGTGCCGCTTGGTGATAGAGGTAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCTACAATGGGCCCTGCTGTTTTATATGCTaGGAGAGATTAAGACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SYRTQDYQPRDGTTYNGPCCFIC*ERLRLG Trigger: ACCCAGTCTTAATCTCTCTCAGCATATAAAACAGCA...GGGCCCATTGTAGGTGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTGGTTTGAATATGCCTGGCCCAGGGGAAGTGGCACAGTTAGGAAGTGTGGACTGGGTATTCTTATaGGTTATGTCACCCCAAATT | + |
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Preference number: 2 (lower is better) Translates to: WGGLNMPGPGEVAQLGSVDWVFL*VMSPQI Trigger: AATTTGGGGTGACATAACCCATAAGAATACCCAGTC...CACACTTCCTAACTGTGCCACTTCCCCTGGGCCAGGCATATTCAAACCACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CAA 90 bp | AGGTTGTACCAGTGTTCTCCTGTCACATCGGATTTAAGGACATTCTaGAGGGCTCCAGACACTGAGTTTCCCTTATGTGGGGACTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RLYQCSPVTSDLRTF*RAPDTEFPLCGDSR Trigger: TCTTGAGTCCCCACATAAGGGAAACTCAGTGTCTGGAGCCCTCAAGAATGTCCTTAAATCCGATGTGACAGGAGAACACTGGTACAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR-3UTR TCA 90 bp | TTGACAGGAAACGCCTCTGGGAAGAAGCTTTCGGTCAGCCCTGGTATCCATCACCCCAAATTAATATGTTaGTGGTTTAAGCCCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: LTGNASGKKLSVSPGIHHPKLIC*WFKPRI Trigger: GATTCTGGGCTTAAACCATCAACATATTAATTTGGG...GTGATGGATACCAGGGCTGACCGAAAGCTTCTTCCCAGAGGCGTTTCCTGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR TCA 72 bp | CTGCAGTCCAGCCCTCGGAGGCTGCCACTCCAGTCTTaGGTAAGGCTCTGCCAGACAGGCAGGAAGGGCACC | + |
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Preference number: 3 (lower is better) Translates to: LQSSPRRLPLQS*VRLCQTGRKGT Trigger: GGTGCCCTTCCTGCCTGTCTGGCAGAGCCTTACTCAAGACTGGAGTGGCAGCCTCCGAGGGCTGGACTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 72 bp | GGTAGGCGTGCCCTTGTTAGAGGAAGTCCGTCACTGTaGGGGTGGGCCTTGAGGCTCCCATGCTCAGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: GRRALVRGSPSL*GWALRLPCSGS Trigger: GGAACCTGAGCATGGGAGCCTCAAGGCCCACCCCCACAGTGACGGACTTCCTCTAACAAGGGCACGCCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR CCA 72 bp | ACCAAGGGGCTGCTGCAGATGGCCCACAGCCTCAAATaGAATCCAGAACCCAGCCGCCTCAGGCTCACACCT | + |
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Preference number: 3 (lower is better) Translates to: TKGLLQMAHSLK*NPEPSRLRLTP Trigger: AGGTGTGAGCCTGAGGCGGCTGGGTTCTGGATTCCATTTGAGGCTGTGGGCCATCTGCAGCAGCCCCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
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| 3UTR GCA 72 bp | GAGGACCCTGCTTCCTTAGGAAGCAGGACACAGACATaGTGTGAGGAAGAGTGGAGGAAGGGAAGCGCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: EDPASLGSRTQT*CEEEWRKGSAA Trigger: GGCGGCGCTTCCCTTCCTCCACTCTTCCTCACAGCATGTCTGTGTCCTGCTTCCTAAGGAAGCAGGGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | GGCCAACAACCTCCAGAACCAAGGGGCTGCTGCAGATaGCCCACAGCCTCAAATGGAATCCAGAACCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GQQPPEPRGCCR*PTASNGIQNPA Trigger: GGCTGGGTTCTGGATTCCATTTGAGGCTGTGGGCCATCTGCAGCAGCCCCTTGGTTCTGGAGGTTGTTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCTCCCACGTGCTGGTGTTAATTAAAGGCACGCACCACCATGTTTGGCTCGGCTCTCAGTGTCCTTaGCACAGCCTGAGGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SASHVLVLIKGTHHHVWLGSQCP*HSLRAG Trigger: CCCTGCCCTCAGGCTGTGCAAAGGACACTGAGAGCC...GAGCCAAACATGGTGGTGCGTGCCTTTAATTAACACCAGCACGTGGGAGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | AGTCCGTCACTGTGGGGGTGGGCCTTGAGGCTCCCATaGTCAGGTTCCACCCAATACAGATGTCTCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPSLWGWALRLP*SGSTQYRCLIL Trigger: GAGGATGAGACATCTGTATTGGGTGGAACCTGAGCATGGGAGCCTCAAGGCCCACCCCCACAGTGACGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR TCA 72 bp | ACAACAGAAGGTACTGTCCACCCACCAGGCGTCCAGTaGGTGTTCGCCACTGCGTACGATGGAGATGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: TTEGTVHPPGVQ*VFATAYDGDAW Trigger: CCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTGGTGGGTGGACAGTACCTTCTGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | ACCAAGGATGGCCAACAACCTCCAGAACCAAGGGGCTaGTGCAGATGGCCCACAGCCTCAAATGGAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TKDGQQPPEPRG*CRWPTASNGIQ Trigger: CTGGATTCCATTTGAGGCTGTGGGCCATCTGCAGCAGCCCCTTGGTTCTGGAGGTTGTTGGCCATCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCTACAATGGGCCCCCGGGTCCCTCCACATaGCCAGGAAGAGAAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SYRTQDYQPRDGTTYNGPPGPST*PGREET Trigger: TGTTTCTTCTCTTCCTGGCAATGTGGAGGGACCCGG...GGGCCCATTGTAGGTGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | AAGGATGGCCAACAACCTCCAGAACCAAGGGGCTGCTaGAGATGGCCCACAGCCTCAAATGGAATCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KDGQQPPEPRGC*RWPTASNGIQN Trigger: GTTCTGGATTCCATTTGAGGCTGTGGGCCATCTGCAGCAGCCCCTTGGTTCTGGAGGTTGTTGGCCATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | GGGATAACGTGTGCCCAATCCAAGGTTTACCAAGGATaGCCAACAACCTCCAGAACCAAGGGGCTGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GITCAQSKVYQG*PTTSRTKGLLQ Trigger: CTGCAGCAGCCCCTTGGTTCTGGAGGTTGTTGGCCATCCTTGGTAAACCTTGGATTGGGCACACGTTATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | AAGCAGGTCAGGAAGCAAGAGCTGATGCAGAGGCCATaGAGGGATGGTCTTTACTGGCTTGTTTCCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQVRKQELMQRP*RDGLYWLVSPG Trigger: GCCAGGGGAAACAAGCCAGTAAAGACCATCCCTCCATGGCCTCTGCATCAGCTCTTGCTTCCTGACCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGTGGTTTGAATATGCCTGGCCCAGGGGAAGTGGCACAGTTAGGAAGTGTGTTTCGTAGTTGTGTTTaGAGCTCGGCTGCCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WGGLNMPGPGEVAQLGSVFRSCV*SSAAWP Trigger: AGGCCAGGCAGCCGAGCTCAAAACACAACTACGAAA...CACACTTCCTAACTGTGCCACTTCCCCTGGGCCAGGCATATTCAAACCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | GTAGTTTGCTTGACAGCTCTGGCAACCGCTCGAAGATaGAAAACCAGACAGCCTCCTGGGACAAACACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VVCLTALATARR*KTRQPPGTNTG Trigger: CCCAGTGTTTGTCCCAGGAGGCTGTCTGGTTTTGCATCTTCGAGCGGTTGCCAGAGCTGTCAAGCAAACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | CAGGCCACACTAGACCCCTCCAGGGAGCTCGTTTCCTaGATGAAAATGGCTCTGTCTACCTTGTGCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: QATLDPSRELVS*MKMALSTLCRQ Trigger: TTGTCTGCACAAGGTAGACAGAGCCATTTTCATGCAGGAAACGAGCTCCCTGGAGGGGTCTAGTGTGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | TTGCTTTTTCGTAGTTGTGTTTTGAGCTCGGCTGCCTaGCCTCAGCCAGCAGCAGGAGTGAATCCTACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLFRSCVLSSAA*PQPAAGVNPTW Trigger: CCAGGTAGGATTCACTCCTGCTGCTGGCTGAGGCCAGGCAGCCGAGCTCAAAACACAACTACGAAAAAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | GAGGAAGCTGACGTAGATAAGGGGACTTGTGCTGGGTaGAATGAGGACCCTGCTTCCTTAGGAAGCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: EEADVDKGTCAG*NEDPASLGSRT Trigger: TGTCCTGCTTCCTAAGGAAGCAGGGTCCTCATTCCACCCAGCACAAGTCCCCTTATCTACGTCAGCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | ACTGTGGCTGACCCTCCATCTGGTCCCTCACCTTTCTaGACTGTAACTATCCCAGACTGCAAGCACTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVADPPSGPSPF*TVTIPDCKHCG Trigger: TCCACAGTGCTTGCAGTCTGGGATAGTTACAGTCCAGAAAGGTGAGGGACCAGATGGAGGGTCAGCCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | GAGCTGATGCAGAGGCCATGGAGGGATGGTCTTTACTaGCTTGTTTCCCCTGGCTTGCTCAGCTTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELMQRPWRDGLY*LVSPGLLSLLS Trigger: AGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGACCATCCCTCCATGGCCTCTGCATCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | GCAGGGGTACTGAGGCGCTCGTCCAGAGTCGGCTCCTaGTATGCTCATCTTTCTCTTCTGAGTTTGTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AGVLRRSSRVGS*YAHLSLLSLCL Trigger: TAAACACAAACTCAGAAGAGAAAGATGAGCATACCAGGAGCCGACTCTGGACGAGCGCCTCAGTACCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGACTGCAAGCACTGTGGACTCTGGGTCTTAAGAGATCTCACTCTGCAGGGCGTAAATGTTACAGAGTaGCCTTGGTCATGGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PDCKHCGLWVLRDLTLQGVNVTE*PWSWCL Trigger: GAGACACCATGACCAAGGCAACTCTGTAACATTTAC...GCCCTGCAGAGTGAGATCTCTTAAGACCCAGAGTCCACAGTGCTTGCAGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCTACAATGGGCCCATGGCTCTGTCTACCTaGTGCAGACAATCTGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: SYRTQDYQPRDGTTYNGPMALST*CRQSVT Trigger: TGTAACAGATTGTCTGCACAAGGTAGACAGAGCCAT...GGGCCCATTGTAGGTGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | GGTCCCTCACCTTTCTGGACTGTAACTATCCCAGACTaGAAGCACTGTGGACTCTGGGTCTTAAGAGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: GPSPFWTVTIPD*KHCGLWVLRDL Trigger: GAGATCTCTTAAGACCCAGAGTCCACAGTGCTTGCAGTCTGGGATAGTTACAGTCCAGAAAGGTGAGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | GTCTTTACTGGCTTGTTTCCCCTGGCTTGCTCAGCTTaGTTTCTTATAGAACCCAAGACTACCAGCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VFTGLFPLACSA*FLIEPKTTSPG Trigger: CCCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CCA 72 bp | GCCTGGCCTCAGCCAGCAGCAGGAGTGAATCCTACCTaGATCACAGTGCTGTTTTATATGCTGAGAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: AWPQPAAGVNPT*ITVLFYMLREI Trigger: AATCTCTCTCAGCATATAAAACAGCACTGTGATCCAGGTAGGATTCACTCCTGCTGCTGGCTGAGGCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR TCA 72 bp | TCATTTGGAGTGACTATCATACGTAATCGGTTAAGATaGGGCTGTACAGAGGTGAGGTGGCCCCAGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFGVTIIRNRLR*GCTEVRWPQAR Trigger: CCTTGCCTGGGGCCACCTCACCTCTGTACAGCCTCATCTTAACCGATTACGTATGATAGTCACTCCAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR TCA 72 bp | GATGCCTGCAGAGAGAGTCTGATCCTGGCTGACTTCTaGTCTAGATGTAGAACTCTCAGCTCCTTCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DACRESLILADF*SRCRTLSSFSR Trigger: TCTGGAGAAGGAGCTGAGAGTTCTACATCTAGATCAGAAGTCAGCCAGGATCAGACTCTCTCTGCAGGCATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | CTCGAGAACTGTCCAGCTAAAATGTCTGGGGTAGTTTaGTTGACAGCTCTGGCAACCGCTCGAAGATGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LENCPAKMSGVV*LTALATARRCK Trigger: TTTGCATCTTCGAGCGGTTGCCAGAGCTGTCAAGCAAACTACCCCAGACATTTTAGCTGGACAGTTCTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | GGTACTGAGGCGCTCGTCCAGAGTCGGCTCCTGGTATaGTCATCTTTCTCTTCTGAGTTTGTGTTTAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GTEALVQSRLLV*SSFSSEFVFRD Trigger: ATCTCTAAACACAAACTCAGAAGAGAAAGATGAGCATACCAGGAGCCGACTCTGGACGAGCGCCTCAGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | GGAGGGATGGTCTTTACTGGCTTGTTTCCCCTGGCTTaGTCAGCTTGCTTTCTTATAGAACCCAAGACTACC | + |
|
Preference number: 3 (lower is better) Translates to: GGMVFTGLFPLA*SACFLIEPKTT Trigger: GGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGACCATCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR TCA 72 bp | ATCGGATTTAAGGACATTCTTGAGGGCTCCAGACACTaGGTTTCCCTTATGTGGGGACTCAAGAGCAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: IGFKDILEGSRH*VSLMWGLKSNS Trigger: GGAGTTGCTCTTGAGTCCCCACATAAGGGAAACTCAGTGTCTGGAGCCCTCAAGAATGTCCTTAAATCCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTGCATGAAAATGGCTCTGTCTACCTTGTGCAGACAATCTGTTACACAGAATGTCTGGGGTAGTTaGCTTGACAGCTCTGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VSCMKMALSTLCRQSVTQNVWGS*LDSSGN Trigger: GTTGCCAGAGCTGTCAAGCAAACTACCCCAGACATT...CTGTGTAACAGATTGTCTGCACAAGGTAGACAGAGCCATTTTCATGCAGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR TCA 72 bp | TCTGCATGTGAATCTGACTTTTTGCAAGCTAGGAACTaGATACTACCTCTATCACCAAGCGGCACCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SACESDFLQARN*ILPLSPSGTPS Trigger: GCTTGGGGTGCCGCTTGGTGATAGAGGTAGTATTCAGTTCCTAGCTTGCAAAAAGTCAGATTCACATGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR GCA 72 bp | CGTTACATTGCAGCTCTGCATGTGAATCTGACTTTTTaGAAGCTAGGAACTGAATACTACCTCTATCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: RYIAALHVNLTF*KLGTEYYLYHQ Trigger: TTGGTGATAGAGGTAGTATTCAGTTCCTAGCTTGCAAAAAGTCAGATTCACATGCAGAGCTGCAATGTAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR TCA 72 bp | TATTCTTATGGGTTATGTCACCCCAAATTAATATGTTaGTGGTTTAAGCCCAGAATCTCAGACCATGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: YSYGLCHPKLIC*WFKPRISDHDL Trigger: GAGGTCATGGTCTGAGATTCTGGGCTTAAACCATCAACATATTAATTTGGGGTGACATAACCCATAAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCGTCCAGTGAGTGTTCGCCACTGCGTACGATGGAGATGCATGGGGCAGGGCGTGTCCGAAACGAATaGCGACCACGCGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QASSECSPLRTMEMHGAGRVRNE*RPRGPP Trigger: AGGAGGACCGCGTGGTCGTCATTCGTTTCGGACACG...CCCTGCCCCATGCATCTCCATCGTACGCAGTGGCGAACACTCACTGGACGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CAA 72 bp | GTTAGGAAGTGTGGCCTCGTTGGGGTAGGCGTGCCCTaGTTAGAGGAAGTCCGTCACTGTGGGGGTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRKCGLVGVGVP*LEEVRHCGGGP Trigger: AGGCCCACCCCCACAGTGACGGACTTCCTCTAACAAGGGCACGCCTACCCCAACGAGGCCACACTTCCTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CAA 72 bp | CTTGTTAGAGGAAGTCCGTCACTGTGGGGGTGGGCCTaGAGGCTCCCATGCTCAGGTTCCACCCAATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVRGSPSLWGWA*RLPCSGSTQYR Trigger: TCTGTATTGGGTGGAACCTGAGCATGGGAGCCTCAAGGCCCACCCCCACAGTGACGGACTTCCTCTAACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR GCA 90 bp | CAGACATGCTGTGAGGAAGAGTGGAGGAAGGGAAGCGCCGCCAGGCAATTGCTTACCTGCCAGCCATTGTaGAGATGCGGAAGCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QTCCEEEWRKGSAARQLLTCQPL*RCGSMY Trigger: GTACATGCTTCCGCATCTGCACAATGGCTGGCAGGT...AAGCAATTGCCTGGCGGCGCTTCCCTTCCTCCACTCTTCCTCACAGCATGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CAA 72 bp | GAGGAAGAGTGGAGGAAGGGAAGCGCCGCCAGGCAATaGCTTTTTCGTAGTTGTGTTTTGAGCTCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEEWRKGSAARQ*LFRSCVLSSAA Trigger: GGCAGCCGAGCTCAAAACACAACTACGAAAAAGCAATTGCCTGGCGGCGCTTCCCTTCCTCCACTCTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCCTCCTGGGACAAACACTGGGAGTAAAGACATTTGCACGCAGTAAGCACCCTCGTCCATCTTCATaGAAGTGGGGTCCCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSLLGQTLGVKTFARSKHPRPSS*KWGPSR Trigger: ACGACTGGGACCCCACTTGCATGAAGATGGACGAGG...GTGCTTACTGCGTGCAAATGTCTTTACTCCCAGTGTTTGTCCCAGGAGGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCTACGAGAGCAGAGTATTTCTATGTGGAAGAGGCTCTCAGTGTCCTTCCATCTTCATGCAAGTaGGGTCCCAGTCGTGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PEATRAEYFYVEEALSVLPSSCK*GPSRVR Trigger: TCGGACACGACTGGGACCCCACTTGCATGAAGATGG...AAGGACACTGAGAGCCTCTTCCACATAGAAATACTCTGCTCTCGTAGCCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CAA 72 bp | GGTCTTTACTGGCTTGTTTCCCCTGGCTTGCTCAGCTaGCTTTCTTATAGAACCCAAGACTACCAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLYWLVSPGLLS*LSYRTQDYQPR Trigger: CCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGGAAACAAGCCAGTAAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR GCA 90 bp | CTTAAGAGATCTCACTCTGCAGGGCTTTACCCCCATAAAAATAAGACCGCACAGATGGCCTGGTCTACCTaGCAGCCATTGTGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRSHSAGLYPHKNKTAQMAWST*QPLCRC Trigger: GCATCTGCACAATGGCTGGCAGGTAGACCAGGCCAT...CTGTGCGGTCTTATTTTTATGGGGGTAAAGCCCTGCAGAGTGAGATCTCTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR CCA 90 bp | CTTAAGAGATCTCACTCTGCAGGGCTTTACCCCCATAAAAATAAGACCGCACAGTCCGAAAGGATGGCCTaGTCTACCTGCCAGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LKRSHSAGLYPHKNKTAQSERMA*STCQPL Trigger: CAATGGCTGGCAGGTAGACCAGGCCATCCTTTCGGA...CTGTGCGGTCTTATTTTTATGGGGGTAAAGCCCTGCAGAGTGAGATCTCTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CAA 72 bp | CAGTGTTCTCCTGTCACATCGGATTTAAGGACATTCTaGAGGGCTCCAGACACTGAGTTTCCCTTATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSPVTSDLRTF*RAPDTEFPLCG Trigger: CCCACATAAGGGAAACTCAGTGTCTGGAGCCCTCAAGAATGTCCTTAAATCCGATGTGACAGGAGAACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CAA 72 bp | TGTAAGCCAGCCCCAAGTAAATGTTACAGAGTTGCCTaGGTCATGGTGTCTCTTCACAGCAATGAAACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CKPAPSKCYRVA*VMVSLHSNETL Trigger: TAGGGTTTCATTGCTGTGAAGAGACACCATGACCAAGGCAACTCTGTAACATTTACTTGGGGCTGGCTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTGCATGAAAATGGCTCTGTCTACCTTGTGCAGACAATCTGTTACACAGGGTACACGGTCTCTATaGTGTCAACCATTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCMKMALSTLCRQSVTQGTRSL*CQPFLA Trigger: AGCAAGAAATGGTTGACATCATAGAGACCGTGTACC...CTGTGTAACAGATTGTCTGCACAAGGTAGACAGAGCCATTTTCATGCAGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| 3UTR CAA 72 bp | GGTTTATTCAGCTTACACTTCTACATTGCTGTTCTCTaGGGTCTATACCTAGGAGTGCCAGCTATGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLHFYIAVL*GLYLGVPAMIT Trigger: TGTTATCATAGCTGGCACTCCTAGGTATAGACCCAAGAGAACAGCAATGTAGAAGTGTAAGCTGAATAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS CCA 90 bp | CCGAAACGAATGACGACCACGCGGTCCTCCTCCGAAAGGATGGCCTaGTCTACCTGCCAGCCATTGTGCAGATGCGGAAGCATGTACGAC | + |
|
Preference number: 5 (lower is better) Translates to: PKRMTTTRSSSERMA*STCQPLCRCGSMYD Trigger: GTCGTACATGCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATCCTTTCGGAGGAGGACCGCGTGGTCGTCATTCGTTTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025464.8 ENSMUST00000145963.9 |
||
| CDS-3UTR CAA 90 bp | TCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCTACAATGGGCCCAGCTCGTACATCTTGTaGAAGTCAGGCACTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SYRTQDYQPRDGTTYNGPSSYIL*KSGTSV Trigger: TACAGAAGTGCCTGACTTCAACAAGATGTACGAGCT...GGGCCCATTGTAGGTGGTGCCATCCCTGGGCTGGTAGTCTTGGGTTCTATAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGGCCTTTCCAGAGGCTACGAGAGCAGAGTATTTCTATGTGGAAGAGGCTTGATCTTGTTGTTGTaGCCAGTGCCCAAATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LQGLSRGYESRVFLCGRGLILLL*PVPKSI Trigger: GATTGATTTGGGCACTGGCAACAACAACAAGATCAA...GCCTCTTCCACATAGAAATACTCTGCTCTCGTAGCCTCTGGAAAGGCCCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145963.9 |
||
| CDS CCA 72 bp | ATGACGACCACGCGGTCCTCCTCCGAAAGGATGGCCTaGTCTACCTGCCAGCCATTGTGCAGATGCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: MTTTRSSSERMA*STCQPLCRCGS Trigger: GCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATCCTTTCGGAGGAGGACCGCGTGGTCGTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025464.8 ENSMUST00000145963.9 |
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