Pregenerated sensors for TXNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024583Ensembl transcript IDs: ENSMUST00000025476.4, ENSMUST00000236892.2, ENSMUST00000237004.2, ENSMUST00000237331.2, ENSMUST00000238061.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGATCAGATTGCAAGCAAGCATTCAGCTACCACCCCAGGACCATaGCTGCTTGCCTCTGCCACGCTCCCCAACATAACAGTCATAGAC | + |
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Preference number: 1 (lower is better) Translates to: LDQIASKHSATTPGP*LLASATLPNITVID Trigger: GTCTATGACTGTTATGTTGGGGAGCGTGGCAGAGGCAAGCAGGCATGGTCCTGGGGTGGTAGCTGAATGCTTGCTTGCAATCTGATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 90 bp | TACAAGATTAATGTGTGGGGATGGAGCAGCAGTCTTATAGAGGCCTaGGCTCAGTTCCCATCACCCACATGGCAGTTCCCACCAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: YKINVWGWSSSLIEA*AQFPSPTWQFPPAV Trigger: GACAGCTGGTGGGAACTGCCATGTGGGTGATGGGAACTGAGCCCAGGCCTCTATAAGACTGCTGCTCCATCCCCACACATTAATCTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 90 bp | CCATTTAGTATTGCTTGTATGTATTTAGGGCTGACCACTAGGGACTaGATAACCTATCAAGAGACTTTTTCCCTGGGTAATACTGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PFSIACMYLGLTTRD*ITYQETFSLGNTGK Trigger: TTTCCCAGTATTACCCAGGGAAAAAGTCTCTTGATAGGTTATCCAGTCCCTAGTGGTCAGCCCTAAATACATACAAGCAATACTAAATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 90 bp | CCCTCTGAAACAGTAAGTACCAATGAACTCTTCTATAACACACCTTaGCCAGGGATTGTCACAGCAATAGAAAATATATACACATATGCA | + |
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Preference number: 1 (lower is better) Translates to: PSETVSTNELFYNTP*PGIVTAIENIYTYA Trigger: TGCATATGTGTATATATTTTCTATTGCTGTGACAATCCCTGGCCAAGGTGTGTTATAGAAGAGTTCATTGGTACTTACTGTTTCAGAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 90 bp | TTGGTTAACCATTCCAAATCCATGCATCCAAACATTACACATACATaGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGT | + |
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Preference number: 1 (lower is better) Translates to: LVNHSKSMHPNITHT*RFQILSKLSMCIDS Trigger: ACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCATGTATGTGTAATGTTTGGATGCATGGATTTGGAATGGTTAACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGGCTCAGTTCCCATCACCCACATGGCAGTTCCCACCAGCTGTCACCCCTAGAAAGTTAAAATCTTaGCATGAGACCAGGTTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: AWAQFPSPTWQFPPAVTPRKLKS*HETRFS Trigger: ACTAAACCTGGTCTCATGCCAAGATTTTAACTTTCT...AGGGGTGACAGCTGGTGGGAACTGCCATGTGGGTGATGGGAACTGAGCCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR-3UTR TCA 90 bp | GCGATTGCAAAGGCCCACACCATGCCCAGCTGGCTCTCTTTGCCTCATAGTTCTTCTCCATTTCAGGTGTaGTTAACAACTTCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: AIAKAHTMPSWLSLPHSSSPFQV*LTTSGW Trigger: CCATCCTGAAGTTGTTAATCACACCTGAAATGGAGA...AGAACTATGAGGCAAAGAGAGCCAGCTGGGCATGGTGTGGGCCTTTGCAATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTGAAACAGTAAGTACCAATGAACTCTTCTATAACACACCTTGGCCAGGGGGTCCTTTGCAAATGTaGAACCACTTTTACTCCGTT | + |
|
Preference number: 2 (lower is better) Translates to: PSETVSTNELFYNTPWPGGPLQM*NHFYSV Trigger: AACGGAGTAAAAGTGGTTTCACATTTGCAAAGGACC...CCCTGGCCAAGGTGTGTTATAGAAGAGTTCATTGGTACTTACTGTTTCAGAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACTATATTGTTAAAATCTGACAGGGGTGCGACTCTCTGTCACATACAGGACATTAATGTGTGGGGATaGAGCAGCAGTCTTATAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VTILLKSDRGATLCHIQDINVWG*SSSLIE Trigger: CTCTATAAGACTGCTGCTCCATCCCCACACATTAAT...GTCCTGTATGTGACAGAGAGTCGCACCCCTGTCAGATTTTAACAATATAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR-3UTR TCA 90 bp | GTGACTATATTGTTAAAATCTGACAGGGGTGCGACTCTCTGTCACATACAGGACTCTGAACAAAAGCAATaGTTTATTGGTACTGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: VTILLKSDRGATLCHIQDSEQKQ*FIGTGN Trigger: GTTGCCAGTACCAATAAATCATTGCTTTTGTTCAGA...GTCCTGTATGTGACAGAGAGTCGCACCCCTGTCAGATTTTAACAATATAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGTACTCCTAATCAATTATCCAGGAGCTaGAAGTCTGACTGCAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: WRFQILSKLSMCIDSTPNQLSRS*KSDCSK Trigger: CTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTG...ATTAGGAGTACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| 3UTR CAA 90 bp | CTTGTGACACATGTCAGCTTCCCACTAGCATTCACCACTTATAACTaGAATGATGTGGGATGTTTGTATGTTGCAACAAAGTTACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LVTHVSFPLAFTTYN*NDVGCLYVATKLQK Trigger: TTTCTGTAACTTTGTTGCAACATACAAACATCCCACATCATTCAAGTTATAAGTGGTGAATGCTAGTGGGAAGCTGACATGTGTCACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACATTACACATACATGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATCTGAACAAAAGCAATaGTTTATTGGTACTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: QTLHIHGGFKSCLNSPCVSEQKQ*FIGTGN Trigger: GTTGCCAGTACCAATAAATCATTGCTTTTGTTCAGA...TACACATGGAGAGTTTAGACAGGATTTGAAACCTCCATGTATGTGTAATGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCATCTTCTTCTCCATTTCAGGTGTGATTAACAACTTCAGGATGGTTTACACCATTCCAAATCCATaGATCCAAACATTACACATA | + |
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Preference number: 2 (lower is better) Translates to: MFIFFSISGVINNFRMVYTIPNP*IQTLHI Trigger: TATGTGTAATGTTTGGATGCATGGATTTGGAATGGT...GTAAACCATCCTGAAGTTGTTAATCACACCTGAAATGGAGAAGAAGATGAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 72 bp | CTTATAGAGGCCTGGGCTCAGTTCCCATCACCCACATaGCAGTTCCCACCAGCTGTCACCCCTCTGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LIEAWAQFPSPT*QFPPAVTPLLG Trigger: GCCCAGCAGAGGGGTGACAGCTGGTGGGAACTGCCATGTGGGTGATGGGAACTGAGCCCAGGCCTCTATAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR GCA 72 bp | TTCAGCTACCACCCCAGGACCATGCCTGCTTGCCTCTaGCACGCTCCCCAACATAACAGTCATAGACTCACC | + |
|
Preference number: 3 (lower is better) Translates to: FSYHPRTMPACL*HAPQHNSHRLT Trigger: GGTGAGTCTATGACTGTTATGTTGGGGAGCGTGGCAGAGGCAAGCAGGCATGGTCCTGGGGTGGTAGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR GCA 72 bp | ATTGCAAGCAAGCATTCAGCTACCACCCCAGGACCATaGCTGCTTGCCTCTGCCACGCTCCCCAACATAACA | + |
|
Preference number: 3 (lower is better) Translates to: IASKHSATTPGP*LLASATLPNIT Trigger: TGTTATGTTGGGGAGCGTGGCAGAGGCAAGCAGGCATGGTCCTGGGGTGGTAGCTGAATGCTTGCTTGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 72 bp | CCACATGGCAGTTCCCACCAGCTGTCACCCCTCTGCTaGGCACCACACTCACTCACACGAATATACACATAC | + |
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Preference number: 3 (lower is better) Translates to: PHGSSHQLSPLC*APHSLTRIYTY Trigger: GTATGTGTATATTCGTGTGAGTGAGTGTGGTGCCCAGCAGAGGGGTGACAGCTGGTGGGAACTGCCATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 72 bp | CCTGCTGCGATTGCAAAGGCCCACACCATGCCCAGCTaGCTCTCTTTGCCTCATAGTTCTGGATCAGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: PAAIAKAHTMPS*LSLPHSSGSDC Trigger: GCAATCTGATCCAGAACTATGAGGCAAAGAGAGCCAGCTGGGCATGGTGTGGGCCTTTGCAATCGCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR GCA 72 bp | CTCTCTTTCCTGCTGCGATTGCAAAGGCCCACACCATaGCCAGCTGGCTCTCTTTGCCTCATAGTTCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LSFLLRLQRPTP*PAGSLCLIVLD Trigger: ATCCAGAACTATGAGGCAAAGAGAGCCAGCTGGGCATGGTGTGGGCCTTTGCAATCGCAGCAGGAAAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR GCA 72 bp | TTGCAAAGGCCCACACCATGCCCAGCTGGCTCTCTTTaGCTCATAGTTCTGGATCAGATTGCAAGCAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQRPTPCPAGSL*LIVLDQIASKH Trigger: ATGCTTGCTTGCAATCTGATCCAGAACTATGAGGCAAAGAGAGCCAGCTGGGCATGGTGTGGGCCTTTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR GCA 72 bp | CAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTaGAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QFPKRIKQLSRS*KSDCSKSSSVF Trigger: AAAGACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| 3UTR TCA 72 bp | CGACTCTCTGTCACATACAGGACTGTATCTCGTTGCTaGCATCATGGTCCCAAGACTCTCAATTTATTACTA | + |
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Preference number: 3 (lower is better) Translates to: RLSVTYRTVSRC*HHGPKTLNLLL Trigger: TAGTAATAAATTGAGAGTCTTGGGACCATGATGTCAGCAACGAGATACAGTCCTGTATGTGACAGAGAGTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 72 bp | ATTGCTTGTATGTATTTAGGGCTGACCACTAGGGACTaGATAACCTATCAAGAGACTTTTTCCCTGGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: IACMYLGLTTRD*ITYQETFSLGN Trigger: ATTACCCAGGGAAAAAGTCTCTTGATAGGTTATCCAGTCCCTAGTGGTCAGCCCTAAATACATACAAGCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR TCA 72 bp | AAACCACTTTTACTCCGTTTTTCAAGTCAAATAGGATaGGACCATTTACAGCCAAGACGAGGCACTTTAATG | + |
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Preference number: 3 (lower is better) Translates to: KPLLLRFSSQIG*DHLQPRRGTLM Trigger: CATTAAAGTGCCTCGTCTTGGCTGTAAATGGTCTCATCCTATTTGACTTGAAAAACGGAGTAAAAGTGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR CCA 72 bp | CATTCCAAATCCATGCATCCAAACATTACACATACATaGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGT | + |
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Preference number: 3 (lower is better) Translates to: HSKSMHPNITHT*RFQILSKLSMC Trigger: ACACATGGAGAGTTTAGACAGGATTTGAAACCTCCATGTATGTGTAATGTTTGGATGCATGGATTTGGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| 3UTR CCA 72 bp | ACAGTAAGTACCAATGAACTCTTCTATAACACACCTTaGCCAGGGATTGTCACAGCAATAGAAAATATATAC | + |
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Preference number: 3 (lower is better) Translates to: TVSTNELFYNTP*PGIVTAIENIY Trigger: GTATATATTTTCTATTGCTGTGACAATCCCTGGCCAAGGTGTGTTATAGAAGAGTTCATTGGTACTTACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| 3UTR TCA 72 bp | TATCACGATTACACTACAAACACTAGTGATGCCATCTaGACAAAAGCAATGATTTATTGGTACTGGCAACAA | + |
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Preference number: 3 (lower is better) Translates to: YHDYTTNTSDAI*TKAMIYWYWQQ Trigger: TTGTTGCCAGTACCAATAAATCATTGCTTTTGTTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| 3UTR TCA 72 bp | CATTATCACAGACCAGTTACTGAGCTCACATACACATaGACTAAACATTACTTAATGACACAAGTTTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: HYHRPVTELTYT*TKHYLMTQVSE Trigger: TTCTGAAACTTGTGTCATTAAGTAATGTTTAGTTCATGTGTATGTGAGCTCAGTAACTGGTCTGTGATAATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTGCTGCGATTGCAAAGGCCCACACCATGCCCAGCTGGCTCTCTTTGCCTTTGCTGATATGTTGTTaGTGGCAGCTGTTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FPAAIAKAHTMPSWLSLPLLICC*WQLFPG Trigger: GCCAGGGAACAGCTGCCACCAACAACATATCAGCAA...AGGCAAAGAGAGCCAGCTGGGCATGGTGTGGGCCTTTGCAATCGCAGCAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| CDS-3UTR GCA 90 bp | GCCTGGGCTCAGTTCCCATCACCCACATGGCAGTTCCCACCAGCTGTCACCCCTGTCATTCATATTTGTTaGCTGGACTGGAGTACCAAT | + |
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Preference number: 4 (lower is better) Translates to: AWAQFPSPTWQFPPAVTPVIHIC*LDWSTN Trigger: ATTGGTACTCCAGTCCAGGCAACAAATATGAATGAC...AGGGGTGACAGCTGGTGGGAACTGCCATGTGGGTGATGGGAACTGAGCCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| CDS-3UTR TCA 90 bp | GATCAGATTGCAAGCAAGCATTCAGCTACCACCCCAGGACCATGCCTGCTTGCCAAACGTAGGTGTTGCTaGTATGTTGTTGGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DQIASKHSATTPGPCLLAKRRCC*YVVGGS Trigger: GCTGCCACCAACAACATATCAGCAACACCTACGTTT...GGCAAGCAGGCATGGTCCTGGGGTGGTAGCTGAATGCTTGCTTGCAATCTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTCTCCGGCTGGAAATCTaGATCGCTCCCGACCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QFPKRIKQLSRSCKSDCSLRLEI*IAPDRL Trigger: AAGCCGGTCGGGAGCGATCCAGATTTCCAGCCGGAG...ACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS-3UTR CCA 90 bp | AGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCACCGCTCAGCTCCGGCTaGAAATCTGGATCGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: RESSNYPGAASLTAVSLPPLSSG*KSGSLP Trigger: CGGGAGCGATCCAGATTTCCAGCCGGAGCTGAGCGG...TGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| 3UTR CAA 72 bp | ATTGCAAAGGCCCACACCATGCCCAGCTGGCTCTCTTaGCCTCATAGTTCTGGATCAGATTGCAAGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: IAKAHTMPSWLS*PHSSGSDCKQA Trigger: TGCTTGCTTGCAATCTGATCCAGAACTATGAGGCAAAGAGAGCCAGCTGGGCATGGTGTGGGCCTTTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
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| CDS-3UTR TCA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTGTCAGTTCCAGAGCTTaGGTTGGCTCACTCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSVSSRA*VGSLLS Trigger: GGAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGAC...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CCA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTTCCAGAGCTTGAGTTaGCTCACTCCTTTCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSFQSLS*LTPFRL Trigger: GAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAA...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CCA 90 bp | TCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTTCCAGAGCTTGAGTTaGCTCACTCCTTTCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSNYPGAASLTAVSLPVSFQSLS*LTPFRL Trigger: GAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAA...AGACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CCA 90 bp | ATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTCCAGAGCTTGAGTTaGCTCACTCCTTTCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: IKQLSRSCKSDCSKSSSVFQSLS*LTPFRL Trigger: GAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAA...GACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR TCA 90 bp | AGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTCAGTTCCAGAGCTTaGGTTGGCTCACTCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RESSNYPGAASLTAVSLPVSSRA*VGSLLS Trigger: GGAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGAC...TGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CCA 90 bp | TCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTCTGATATGTTGTTGGTaGCAGCTGTTCCCTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: SSNYPGAASLTAVSLPVSLICCW*QLFPGT Trigger: AGTGCCAGGGAACAGCTGCCACCAACAACATATCAG...AGACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CCA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTCTGATATGTTGTTGGTaGCAGCTGTTCCCTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSLICCW*QLFPGT Trigger: AGTGCCAGGGAACAGCTGCCACCAACAACATATCAG...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CCA 90 bp | ATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTGCTGATATGTTGTTaGTGGCAGCTGTTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IKQLSRSCKSDCSKSSSVLLICC*WQLFPG Trigger: GCCAGGGAACAGCTGCCACCAACAACATATCAGCAA...GACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CCA 90 bp | AACATTACACATACATGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATACCGCTCAGCTCCGGCTaGAAATCTGGATCGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: NITHTWRFQILSKLSMCIPLSSG*KSGSLP Trigger: CGGGAGCGATCCAGATTTCCAGCCGGAGCTGAGCGG...TATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCATGTATGTGTAATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS-3UTR CCA 90 bp | TTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTTGCTGATATGTTGTTaGTGGCAGCTGTTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FPKRIKQLSRSCKSDCSKLLICC*WQLFPG Trigger: GCCAGGGAACAGCTGCCACCAACAACATATCAGCAA...CTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR TCA 90 bp | AAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAAACGTAGGTGTTGCTaGTATGTTGTTGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRIKQLSRSCKSDCSKSSKRRCC*YVVGGS Trigger: GCTGCCACCAACAACATATCAGCAACACCTACGTTT...GGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATAAAAGATTAACAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCTCCGGCTGGAAATCTaGATCGCTCCCGACCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNKRLTVSEENQAIIQELLRLEI*IAPDRL Trigger: AAGCCGGTCGGGAGCGATCCAGATTTCCAGCCGGAG...CAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTGTTAATCTTTTATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTACCCTGACCGTTATCTaGTCCTTGAAACTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSTLTVI*SLKLHG Trigger: TCCATGAAGTTTCAAGGACCAGATAACGGTCAGGGT...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | ATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCACCCTGACCGTTATCTaGTCCTTGAAACTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IKQLSRSCKSDCSKSSSVTLTVI*SLKLHG Trigger: TCCATGAAGTTTCAAGGACCAGATAACGGTCAGGGT...GACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| 3UTR CAA 72 bp | GGTGCGACTCTCTGTCACATACAGGACTGTATCTCGTaGCTGACATCATGGTCCCAAGACTCTCAATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: GATLCHIQDCIS*LTSWSQDSQFI Trigger: AATAAATTGAGAGTCTTGGGACCATGATGTCAGCAACGAGATACAGTCCTGTATGTGACAGAGAGTCGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTGTCTGCGTCCTCATTaGTTCCAGGATCATTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSNYPGAASLTAVSLPVSCLRPH*FQDHFL Trigger: TAGAAAATGATCCTGGAAGCAATGAGGACGCAGACA...AGACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | ATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTGTCTGCGTCCTCATTaGTTCCAGGATCATTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IKQLSRSCKSDCSKSSSVCLRPH*FQDHFL Trigger: TAGAAAATGATCCTGGAAGCAATGAGGACGCAGACA...GACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGTACTCCTAATGCCCTTTGGAATGTCTaGGTCCTCATTGCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRFQILSKLSMCIDSTPNALWNV*VLIASR Trigger: CCTGGAAGCAATGAGGACGCAGACATTCCAAAGGGC...ATTAGGAGTACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTGTCTGCGTCCTCATTaGTTCCAGGATCATTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FPKRIKQLSRSCKSDCSKCLRPH*FQDHFL Trigger: TAGAAAATGATCCTGGAAGCAATGAGGACGCAGACA...CTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTCAGTTGTCAAAGCCGTaGTCATCACTTTCATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QFPKRIKQLSRSCKSDCSQLSKP*SSLSLR Trigger: TCTTAATGAAAGTGATGAGCACGGCTTTGACAACTG...ACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTCAGTTGTCAAAGCCGTaGTCATCACTTTCATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSQLSKP*SSLSLR Trigger: TCTTAATGAAAGTGATGAGCACGGCTTTGACAACTG...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTGTCATTCATATTTGTTaGCTGGACTGGAGTACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSVIHIC*LDWSTN Trigger: ATTGGTACTCCAGTCCAGGCAACAAATATGAATGAC...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGTACTCCTAATCTGATATGTTGTTGGTaGCAGCTGTTCCCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: WRFQILSKLSMCIDSTPNLICCW*QLFPGT Trigger: AGTGCCAGGGAACAGCTGCCACCAACAACATATCAG...ATTAGGAGTACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGTACTCCTAATTTGCTGATATGTTGTTaGTGGCAGCTGTTCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRFQILSKLSMCIDSTPNLLICC*WQLFPG Trigger: GCCAGGGAACAGCTGCCACCAACAACATATCAGCAA...ATTAGGAGTACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTGCCAACCACTCGTTTaGAGTCATTCATATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPKRIKQLSRSCKSDCSKCQPLV*SHSYLL Trigger: CAACAAATATGAATGACTTCAAACGAGTGGTTGGCA...CTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCATGCCAACCACTCGTTTaGAGTCATTCATATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RESSNYPGAASLTAVSLPCQPLV*SHSYLL Trigger: CAACAAATATGAATGACTTCAAACGAGTGGTTGGCA...TGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCGTCATTCATATTTGTTaGCTGGACTGGAGTACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRIKQLSRSCKSDCSKSSVIHIC*LDWSTN Trigger: ATTGGTACTCCAGTCCAGGCAACAAATATGAATGAC...GGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTCCTCTAGAGATAGAGTAACTTTTAGTCAATGTGATACTAGACACAACTTCCAGAGCTTGAGTTaGCTCACTCCTTTCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCSSRDRVTFSQCDTRHNFQSLS*LTPFRL Trigger: GAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAA...GTTGTGTCTAGTATCACATTGACTAAAAGTTACTCTATCTCTAGAGGAACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTATTTGTTGCCTGGACTaGAGTACCAATGAAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSICCLD*STNESK Trigger: TTTACTTTCATTGGTACTCCAGTCCAGGCAACAAAT...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTTCATATTTGTTGCCTaGACTGGAGTACCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSNYPGAASLTAVSLPVSFIFVA*TGVPMK Trigger: TTTCATTGGTACTCCAGTCCAGGCAACAAATATGAA...AGACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR TCA 90 bp | TTTACAACTGCATGTATCACGATTACACTACAAACACTAGTGATGCCATCTGAAAAACGTAGGTGTTGCTaGTATGTTGTTGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTTACITITLQTLVMPSEKRRCC*YVVGGS Trigger: GCTGCCACCAACAACATATCAGCAACACCTACGTTT...TTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATACATGCAGTTGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCATTTGTTGCCTGGACTaGAGTACCAATGAAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRIKQLSRSCKSDCSKSSICCLD*STNESK Trigger: TTTACTTTCATTGGTACTCCAGTCCAGGCAACAAAT...GGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCTTCATATTTGTTGCCTaGACTGGAGTACCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRIKQLSRSCKSDCSKSSFIFVA*TGVPMK Trigger: TTTCATTGGTACTCCAGTCCAGGCAACAAATATGAA...GGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTCATCTTCTTCTCCATTTCAGGTGTGATTAACAACTTCAGGATGGTTTACACCCTGACCGTTATCTaGTCCTTGAAACTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MFIFFSISGVINNFRMVYTLTVI*SLKLHG Trigger: TCCATGAAGTTTCAAGGACCAGATAACGGTCAGGGT...GTAAACCATCCTGAAGTTGTTAATCACACCTGAAATGGAGAAGAAGATGAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGTACCCAAGGATATCAACAGTGAAGCTAACCTAAAACCAAAATATTTGCAAGAAGACTGCCTGTaGGTACTTATTACTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQVPKDINSEANLKPKYLQEDCL*VLITHR Trigger: TCTATGAGTAATAAGTACCCACAGGCAGTCTTCTTG...CAAATATTTTGGTTTTAGGTTAGCTTCACTGTTGATATCCTTGGGTACCTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATAAAAGATTAACAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGACCCTGACCGTTATCTaGTCCTTGAAACTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNKRLTVSEENQAIIQELTLTVI*SLKLHG Trigger: TCCATGAAGTTTCAAGGACCAGATAACGGTCAGGGT...CAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTGTTAATCTTTTATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | ACAAATAAAAGATTAACAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGTGTCTGCGTCCTCATTaGTTCCAGGATCATTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TNKRLTVSEENQAIIQELCLRPH*FQDHFL Trigger: TAGAAAATGATCCTGGAAGCAATGAGGACGCAGACA...CAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTGTTAATCTTTTATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | TTTACAACTGCATGTATCACGATTACACTACAAACACTAGTGATGCCATCTGAAGTCATTCATATTTGTTaGCTGGACTGGAGTACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTTACITITLQTLVMPSEVIHIC*LDWSTN Trigger: ATTGGTACTCCAGTCCAGGCAACAAATATGAATGAC...TTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATACATGCAGTTGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTCCTCTAGAGATAGAGTAACTTTTAGTCAATGTGATACTAGACACAACCAGTTGTCAAAGCCGTaGTCATCACTTTCATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCSSRDRVTFSQCDTRHNQLSKP*SSLSLR Trigger: TCTTAATGAAAGTGATGAGCACGGCTTTGACAACTG...GTTGTGTCTAGTATCACATTGACTAAAAGTTACTCTATCTCTAGAGGAACAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | CAAACATTACACATACATGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATTCATATTTGTTGCCTaGACTGGAGTACCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTLHIHGGFKSCLNSPCVFIFVA*TGVPMK Trigger: TTTCATTGGTACTCCAGTCCAGGCAACAAATATGAA...TACACATGGAGAGTTTAGACAGGATTTGAAACCTCCATGTATGTGTAATGTTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | AAAATAATGAATTACAAGATTAATGTGTGGGGATGGAGCAGCAGTCTTATAGAGATTTGTTGCCTGGACTaGAGTACCAATGAAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KIMNYKINVWGWSSSLIEICCLD*STNESK Trigger: TTTACTTTCATTGGTACTCCAGTCCAGGCAACAAAT...CTCTATAAGACTGCTGCTCCATCCCCACACATTAATCTTGTAATTCATTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTCCTCTAGAGATAGAGTAACTTTTAGTCAATGTGATACTAGACACAACTTCATATTTGTTGCCTaGACTGGAGTACCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCSSRDRVTFSQCDTRHNFIFVA*TGVPMK Trigger: TTTCATTGGTACTCCAGTCCAGGCAACAAATATGAA...GTTGTGTCTAGTATCACATTGACTAAAAGTTACTCTATCTCTAGAGGAACAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CAA 90 bp | GATCAGATTGCAAGCAAGCATTCAGCTACCACCCCAGGACCATGCCTGCTTGCCGTTCCAGAGCTTGAGTaGGCTCACTCCTTTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DQIASKHSATTPGPCLLAVPELE*AHSFPP Trigger: AGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAAC...GGCAAGCAGGCATGGTCCTGGGGTGGTAGCTGAATGCTTGCTTGCAATCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
||
| CDS-3UTR CAA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTCCTCTCATGGTGAACTaGACCACGGCAAGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSPLMVN*TTASLE Trigger: CTCCAGACTTGCCGTGGTCAAGTTCACCATGAGAGG...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CAA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTGTTCCAGAGCTTGAGTaGGCTCACTCCTTTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSVPELE*AHSFPP Trigger: AGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAAC...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCACCTCTCATGGTGAACTaGACCACGGCAAGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RESSNYPGAASLTAVSLPPLMVN*TTASLE Trigger: CTCCAGACTTGCCGTGGTCAAGTTCACCATGAGAGG...TGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTGGTGTTGCTGATATGTaGTTGGTGGCAGCTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFPKRIKQLSRSCKSDCSGVADM*LVAAVP Trigger: GGGAACAGCTGCCACCAACAACATATCAGCAACACC...ACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTTCCAGAGCTTGAGTaGGCTCACTCCTTTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RESSNYPGAASLTAVSLPVPELE*AHSFPP Trigger: AGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAAC...TGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | ATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTGTCAGTTCCAGAGCTaGAGTTGGCTCACTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IKQLSRSCKSDCSKSSSVCQFQS*SWLTPF Trigger: GAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACA...GACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTTGTACCCTAATGGCTTTCCCAATCCATATAGCCCTTaGGAATGTCTGCGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASLTAVSLPVSLYPNGFPNPYSP*ECLRPH Trigger: ATGAGGACGCAGACATTCCAAAGGGCTATATGGATT...GGGAAAGCCATTAGGGTACAAAGACACTGGAAGACTTACTGCAGTCAGACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025476.4 |
||
| CDS-3UTR CAA 90 bp | ATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTGGCTTTCCCCTTTTTaGCCAACCACTCGTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IKQLSRSCKSDCSKSSSVWLSPF*PTTRLK Trigger: CTTCAAACGAGTGGTTGGCAAAAAAGGGGAAAGCCA...GACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTGGCTTTCCCCTTTTTaGCCAACCACTCGTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSWLSPF*PTTRLK Trigger: CTTCAAACGAGTGGTTGGCAAAAAAGGGGAAAGCCA...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS TCA 90 bp | ACAATGCCATCTTCTTTAATGTCATCTTCTGTCAGTTCCAGAGCTTaGGTTGGCTCACTCCTTTCCGCCTCCTCAAAATCCATAGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: TMPSSLMSSSVSSRA*VGSLLSASSKSIDR Trigger: CCGATCTATGGATTTTGAGGAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACAGAAGATGACATTAAAGAAGATGGCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025476.4 ENSMUST00000236892.2 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | TCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTAATCCATATAGCCCTTaGGAATGTCTGCGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSNYPGAASLTAVSLPVSNPYSP*ECLRPH Trigger: ATGAGGACGCAGACATTCCAAAGGGCTATATGGATT...AGACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAATCCATATAGCCCTTaGGAATGTCTGCGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QFPKRIKQLSRSCKSDCSNPYSP*ECLRPH Trigger: ATGAGGACGCAGACATTCCAAAGGGCTATATGGATT...ACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTTGTACCCTAATGGCTTTCCCTCTTTTCGTAAACAGTaGTCAAAGCCGTGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLTAVSLPVSLYPNGFPSFRKQ*SKPCSS Trigger: TGATGAGCACGGCTTTGACAACTGTTTACGAAAAGA...GGGAAAGCCATTAGGGTACAAAGACACTGGAAGACTTACTGCAGTCAGACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025476.4 |
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| CDS-3UTR CAA 90 bp | GTGACTATATTGTTAAAATCTGACAGGGGTGCGACTCTCTGTCACATACAGGACTGGCTTTCCCCTTTTTaGCCAACCACTCGTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTILLKSDRGATLCHIQDWLSPF*PTTRLK Trigger: CTTCAAACGAGTGGTTGGCAAAAAAGGGGAAAGCCA...GTCCTGTATGTGACAGAGAGTCGCACCCCTGTCAGATTTTAACAATATAGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000237004.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGTACCCAAGGATATCAACAGTGAAGCTAACCTAAAACCAAAATATTTGGGTGTTGCTGATATGTaGTTGGTGGCAGCTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQVPKDINSEANLKPKYLGVADM*LVAAVP Trigger: GGGAACAGCTGCCACCAACAACATATCAGCAACACC...CAAATATTTTGGTTTTAGGTTAGCTTCACTGTTGATATCCTTGGGTACCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTCTTTTCGTAAACAGTaGTCAAAGCCGTGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSNYPGAASLTAVSLPVSSFRKQ*SKPCSS Trigger: TGATGAGCACGGCTTTGACAACTGTTTACGAAAAGA...AGACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTTCTTTTCGTAAACAGTaGTCAAAGCCGTGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: QFPKRIKQLSRSCKSDCSSFRKQ*SKPCSS Trigger: TGATGAGCACGGCTTTGACAACTGTTTACGAAAAGA...ACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | TTTACAACTGCATGTATCACGATTACACTACAAACACTAGTGATGCCATCTGAAGTTCCAGAGCTTGAGTaGGCTCACTCCTTTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FTTACITITLQTLVMPSEVPELE*AHSFPP Trigger: AGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAAC...TTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATACATGCAGTTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | CCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTAGTCATTCATATTTGTaGCCTGGACTGGAGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: PKRIKQLSRSCKSDCSKSSHSYL*PGLEYQ Trigger: TTGGTACTCCAGTCCAGGCAACAAATATGAATGACT...AGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | GTCAGAATGTACTTGAACTTGGTTAACCATTCCAAATCCATGCATCCAAACATTGGTGTTGCTGATATGTaGTTGGTGGCAGCTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VRMYLNLVNHSKSMHPNIGVADM*LVAAVP Trigger: GGGAACAGCTGCCACCAACAACATATCAGCAACACC...AATGTTTGGATGCATGGATTTGGAATGGTTAACCAAGTTCAAGTACATTCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS-3UTR CAA 90 bp | CAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTTTTTCTAAGTGCTGCTaGATTTTCTCTTCTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFPKRIKQLSRSCKSDCSFSKCC*IFSSSP Trigger: GGGACTAGAAGAGAAAATCAAGCAGCACTTAGAAAA...ACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTTTCGTAAACAGTaGTCAAAGCCGTGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FPKRIKQLSRSCKSDCSKSFRKQ*SKPCSS Trigger: TGATGAGCACGGCTTTGACAACTGTTTACGAAAAGA...CTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | TTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGTACTCCTAATCCCTGTTGTCAGTTCCAGAGCTaGAGTTGGCTCACTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQILSKLSMCIDSTPNPCCQFQS*SWLTPF Trigger: GAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACA...ACAGGGATTAGGAGTACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS-3UTR CAA 90 bp | AGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCATTTTCTAAGTGCTGCTaGATTTTCTCTTCTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RESSNYPGAASLTAVSLPFSKCC*IFSSSP Trigger: GGGACTAGAAGAGAAAATCAAGCAGCACTTAGAAAA...TGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | AGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAACCGTTATCTGGTCCTaGAAACTTCATGGAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RESSNYPGAASLTAVSLPTVIWS*KLHGIK Trigger: CTTTATTCCATGAAGTTTCAAGGACCAGATAACGGT...TGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | TTTACAACTGCATGTATCACGATTACACTACAAACACTAGTGATGCCATCTGAATGTCAGTTCCAGAGCTaGAGTTGGCTCACTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTTACITITLQTLVMPSECQFQS*SWLTPF Trigger: GAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACA...TTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATACATGCAGTTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | ATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCAGTGTCTTGCCAACCACTCGTTaGAAGTCATTCATATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IKQLSRSCKSDCSKSSSVLPTTR*KSFIFV Trigger: AACAAATATGAATGACTTCAAACGAGTGGTTGGCAA...GACACTGGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | ACAAATAAAAGATTAACAGTTTCCGAAGAGAATCAAGCAATTATCCAGGAGCTGTGTCAGTTCCAGAGCTaGAGTTGGCTCACTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNKRLTVSEENQAIIQELCQFQS*SWLTPF Trigger: GAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACA...CAGCTCCTGGATAATTGCTTGATTCTCTTCGGAAACTGTTAATCTTTTATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | AAGAGAATCAAGCAATTATCCAGGAGCTGCAAGTCTGACTGCAGTAAGTCTTCCTTGCCAACCACTCGTTaGAAGTCATTCATATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KRIKQLSRSCKSDCSKSSLPTTR*KSFIFV Trigger: AACAAATATGAATGACTTCAAACGAGTGGTTGGCAA...GGAAGACTTACTGCAGTCAGACTTGCAGCTCCTGGATAATTGCTTGATTCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGTACTCCTAATAGTCATTCATATTTGTaGCCTGGACTGGAGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: WRFQILSKLSMCIDSTPNSHSYL*PGLEYQ Trigger: TTGGTACTCCAGTCCAGGCAACAAATATGAATGACT...ATTAGGAGTACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS GCA 90 bp | GACTCCAAGAAGGACATGTCTTTTCGTAAACAGTTGTCAAAGCCGTaGTCATCACTTTCATTAAGACATTCACAACCAGCTTTGTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: DSKKDMSFRKQLSKP*SSLSLRHSQPALLI Trigger: TATTAACAAAGCTGGTTGTGAATGTCTTAATGAAAGTGATGAGCACGGCTTTGACAACTGTTTACGAAAAGACATGTCCTTCTTGGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | TTTCAAATCCTGTCTAAACTCTCCATGTGTATAGACAGTACTCCTAATCCCTGTACCGTTATCTGGTCCTaGAAACTTCATGGAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FQILSKLSMCIDSTPNPCTVIWS*KLHGIK Trigger: CTTTATTCCATGAAGTTTCAAGGACCAGATAACGGT...ACAGGGATTAGGAGTACTGTCTATACACATGGAGAGTTTAGACAGGATTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS-3UTR CAA 90 bp | TTTACAACTGCATGTATCACGATTACACTACAAACACTAGTGATGCCATCTGAAAGTCATTCATATTTGTaGCCTGGACTGGAGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: FTTACITITLQTLVMPSESHSYL*PGLEYQ Trigger: TTGGTACTCCAGTCCAGGCAACAAATATGAATGACT...TTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATACATGCAGTTGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | GTCAGAATGTACTTGAACTTGGTTAACCATTCCAAATCCATGCATCCAAACATTTTTTCTAAGTGCTGCTaGATTTTCTCTTCTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VRMYLNLVNHSKSMHPNIFSKCC*IFSSSP Trigger: GGGACTAGAAGAGAAAATCAAGCAGCACTTAGAAAA...AATGTTTGGATGCATGGATTTGGAATGGTTAACCAAGTTCAAGTACATTCTGAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS-3UTR CAA 90 bp | TTTACAACTGCATGTATCACGATTACACTACAAACACTAGTGATGCCATCTGAAACCGTTATCTGGTCCTaGAAACTTCATGGAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTTACITITLQTLVMPSETVIWS*KLHGIK Trigger: CTTTATTCCATGAAGTTTCAAGGACCAGATAACGGT...TTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATACATGCAGTTGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGGTACCCAAGGATATCAACAGTGAAGCTAACCTAAAACCAAAATATTTGTTGACAACTCTCAACTaGCCAATATGTATTCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RQVPKDINSEANLKPKYLLTTLN*PICILR Trigger: ACGAAGAATACATATTGGCAAGTTGAGAGTTGTCAA...CAAATATTTTGGTTTTAGGTTAGCTTCACTGTTGATATCCTTGGGTACCTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025476.4 |
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| CDS-3UTR CAA 90 bp | AACATTACACATACATGGAGGTTTCAAATCCTGTCTAAACTCTCCATGTGTATAACCGTTATCTGGTCCTaGAAACTTCATGGAATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NITHTWRFQILSKLSMCITVIWS*KLHGIK Trigger: CTTTATTCCATGAAGTTTCAAGGACCAGATAACGGT...TATACACATGGAGAGTTTAGACAGGATTTGAAACCTCCATGTATGTGTAATGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS-3UTR CAA 90 bp | TTTACAACTGCATGTATCACGATTACACTACAAACACTAGTGATGCCATCTGAATTGCCAACCACTCGTTaGAAGTCATTCATATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FTTACITITLQTLVMPSELPTTR*KSFIFV Trigger: AACAAATATGAATGACTTCAAACGAGTGGTTGGCAA...TTCAGATGGCATCACTAGTGTTTGTAGTGTAATCGTGATACATGCAGTTGTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS CCA 72 bp | ACGGCAAGTCTGGAGCCCGCCCCGCTCAGCTCCGGCTaGAAATCTGGATCGCTCCCGACCGGCTTCACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TASLEPAPLSSG*KSGSLPTGFTP Trigger: GGGAGTGAAGCCGGTCGGGAGCGATCCAGATTTCCAGCCGGAGCTGAGCGGGGCGGGCTCCAGACTTGCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS CAA 90 bp | GCCGGGGCAATCCGAAGACACGGTCCACACCCTCTCATGGTGAACTaGACCACGGCAAGTCTGGAGCCCGCCCCGCTCAGCTCCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGAIRRHGPHPLMVN*TTASLEPAPLSSGW Trigger: CCAGCCGGAGCTGAGCGGGGCGGGCTCCAGACTTGCCGTGGTCAAGTTCACCATGAGAGGGTGTGGACCGTGTCTTCGGATTGCCCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS CAA 72 bp | ATCCGAAGACACGGTCCACACCCTCTCATGGTGAACTaGACCACGGCAAGTCTGGAGCCCGCCCCGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IRRHGPHPLMVN*TTASLEPAPLS Trigger: GCTGAGCGGGGCGGGCTCCAGACTTGCCGTGGTCAAGTTCACCATGAGAGGGTGTGGACCGTGTCTTCGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 |
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| CDS GCA 72 bp | TCCCTGGCACTGATGCACATCTACTTCCAAGAAGACTaGCTGTGGGTACTTATTACTCATAGAGCTGAACGC | + |
|
Preference number: 6 (lower is better) Translates to: SLALMHIYFQED*LWVLITHRAER Trigger: GCGTTCAGCTCTATGAGTAATAAGTACCCACAGGCAGTCTTCTTGGAAGTAGATGTGCATCAGTGCCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000238061.2 |
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| CDS TCA 72 bp | TCTTCTTTAATGTCATCTTCTGTCAGTTCCAGAGCTTaGGTTGGCTCACTCCTTTCCGCCTCCTCAAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLMSSSVSSRA*VGSLLSASSKS Trigger: GGATTTTGAGGAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACAGAAGATGACATTAAAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025476.4 ENSMUST00000236892.2 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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| CDS CAA 90 bp | AACAATGCCATCTTCTTTAATGTCATCTTCTGTCAGTTCCAGAGCTaGAGTTGGCTCACTCCTTTCCGCCTCCTCAAAATCCATAGATCG | + |
|
Preference number: 6 (lower is better) Translates to: NNAIFFNVIFCQFQS*SWLTPFRLLKIHRS Trigger: CGATCTATGGATTTTGAGGAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACAGAAGATGACATTAAAGAAGATGGCATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025476.4 ENSMUST00000236892.2 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS CCA 72 bp | TTTAATGTCATCTTCTGTCAGTTCCAGAGCTTGAGTTaGCTCACTCCTTTCCGCCTCCTCAAAATCCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: FNVIFCQFQSLS*LTPFRLLKIHR Trigger: TCTATGGATTTTGAGGAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACAGAAGATGACATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025476.4 ENSMUST00000236892.2 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS CAA 72 bp | ATCTTCTTTAATGTCATCTTCTGTCAGTTCCAGAGCTaGAGTTGGCTCACTCCTTTCCGCCTCCTCAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: IFFNVIFCQFQS*SWLTPFRLLKI Trigger: GATTTTGAGGAGGCGGAAAGGAGTGAGCCAACTCAAGCTCTGGAACTGACAGAAGATGACATTAAAGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025476.4 ENSMUST00000236892.2 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS CAA 90 bp | TCATCACAGTCAGACTCCAAGAAGGACATGTCTTTTCGTAAACAGTaGTCAAAGCCGTGCTCATCACTTTCATTAAGACATTCACAACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSQSDSKKDMSFRKQ*SKPCSSLSLRHSQP Trigger: TGGTTGTGAATGTCTTAATGAAAGTGATGAGCACGGCTTTGACAACTGTTTACGAAAAGACATGTCCTTCTTGGAGTCTGACTGTGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS GCA 72 bp | AAGGACATGTCTTTTCGTAAACAGTTGTCAAAGCCGTaGTCATCACTTTCATTAAGACATTCACAACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KDMSFRKQLSKP*SSLSLRHSQPA Trigger: AGCTGGTTGTGAATGTCTTAATGAAAGTGATGAGCACGGCTTTGACAACTGTTTACGAAAAGACATGTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025476.4 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
||
| CDS CAA 72 bp | TTTTACATATTTAGGACCCTGACCGTTATCTGGTCCTaGAAACTTCATGGAATAAAGCTTAACAGGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: FYIFRTLTVIWS*KLHGIKLNRLI Trigger: AATCAGCCTGTTAAGCTTTATTCCATGAAGTTTCAAGGACCAGATAACGGTCAGGGTCCTAAATATGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025476.4 ENSMUST00000236892.2 ENSMUST00000237004.2 ENSMUST00000237331.2 ENSMUST00000238061.2 |
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