Pregenerated sensors for TXNIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038393Ensembl transcript IDs: ENSMUST00000049093.8, ENSMUST00000074519.13
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTaGTCGCAGCACTCAGGAGGCAGAGGCAGGTGGATCTCTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: VRWEKASKAITKLGL*SQHSGGRGRWISQA Trigger: GGCCTGAGAGATCCACCTGCCTCTGCCTCCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 90 bp | ACACAGGACAAAGTGCTAAGGCTTAGTGAGCTTCCGAGCCAGGGCTaGGGCCACAGTGAAAGCAGCACTTTCTCCCAACACTGGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: TQDKVLRLSELPSQG*GHSESSTFSQHWTG Trigger: TCCTGTCCAGTGTTGGGAGAAAGTGCTGCTTTCACTGTGGCCTCAGCCCTGGCTCGGAAGCTCACTAAGCCTTAGCACTTTGTCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR CCA 90 bp | GGGGTGTACCCGTTCCCCGCTGTAGAGACTGAGTCTCTGAAACACTaGAGTTCAAGCAGAGAGGCAGAAAGAAATGCGCTAATACAGATG | + |
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Preference number: 1 (lower is better) Translates to: GVYPFPAVETESLKH*SSSREAERNALIQM Trigger: CATCTGTATTAGCGCATTTCTTTCTGCCTCTCTGCTTGAACTCCAGTGTTTCAGAGACTCAGTCTCTACAGCGGGGAACGGGTACACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR CCA 90 bp | TGCTTACAAGAGAACACAGTGCAACTGGCTGTAAAATGGCTTTTATaGCCGTCAGTGGGCACAGCTACTACTGCTCCCAGGGTGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: CLQENTVQLAVKWLL*PSVGTATTAPRVKS Trigger: TGACTTCACCCTGGGAGCAGTAGTAGCTGTGCCCACTGACGGCCATAAAAGCCATTTTACAGCCAGTTGCACTGTGTTCTCTTGTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 90 bp | AACATCCGAGAAAGTGGTCAGGTCTCAATTTTTCTAAGAGTGTTCTaGCATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTG | + |
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Preference number: 1 (lower is better) Translates to: NIRESGQVSIFLRVF*HPPSKHSYATVRAL Trigger: CAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGTCAGAACACTCTTAGAAAAATTGAGACCTGACCACTTTCTCGGATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 90 bp | AAACAAAAACCTTGGAAAGACAACGCCAGAAGGTCAGCAGTGCCCTaGCTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGA | + |
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Preference number: 1 (lower is better) Translates to: KQKPWKDNARRSAVP*LSQHKQVLHFQHPR Trigger: TCTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCTGACCTTCTGGCGTTGTCTTTCCAAGGTTTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 90 bp | GAATCAATTCCAAGGGGTTACAGGGAAATAACAGATTCTCCCATCTaGTTATGCTTACAAGAGAACACAGTGCAACTGGCTGTAAAATGG | + |
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Preference number: 1 (lower is better) Translates to: ESIPRGYREITDSPI*LCLQENTVQLAVKW Trigger: CCATTTTACAGCCAGTTGCACTGTGTTCTCTTGTAAGCATAATCAGATGGGAGAATCTGTTATTTCCCTGTAACCCCTTGGAATTGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGAGGAGGCAGAGGCAGGTaGATCTCTCAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LNVECHPGSSCQPQPFTGGGRGR*ISQASL Trigger: CAGGCTGGCCTGAGAGATCCACCTGCCTCTGCCTCC...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR CAA 90 bp | TGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTaGATCGCAGCACTCAGGAGGCAGAGGCAGGTGGATCTCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: CALGESLKSNNQAGP*IAALRRQRQVDLSG Trigger: GCCTGAGAGATCCACCTGCCTCTGCCTCCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCAGGTCAGCAGTGCCCTaGCTCAGTCAACACAAACAA | + |
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Preference number: 2 (lower is better) Translates to: QLPRISQAACSPAVEGLFRSAVP*LSQHKQ Trigger: TTGTTTGTGTTGACTGAGTCAGGGCACTGCTGACCT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGCCACAGTGCGGGCACTaGTCTGCACCACTTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GESLKSNNQAGPLIAALRPQCGH*SAPLEA Trigger: GGCTTCAAGTGGTGCAGACCAGTGCCCGCACTGTGG...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CCA 90 bp | ACATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTGGTCTGCACCACGAGTCTCTGAAACACTaGAGTTCAAGCAGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TSTQQTLLCHSAGTGLHHESLKH*SSSREA Trigger: TGCCTCTCTGCTTGAACTCCAGTGTTTCAGAGACTC...GTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTCTACTGCTCCCAGGGTaGAGTCAACTTGGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QCRMSPRLQLSTTTLHRILLLPG*SQLGAA Trigger: AGCTGCTCCAAGTTGACTTCACCCTGGGAGCAGTAG...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCACAAAATTTTGGCCATaGCTTGAAATTGGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QLPRISQAACSPAVEGLFTKFWP*LEIGSV Trigger: GACAGAGCCAATTTCAAGTCATGGCCAAAATTTTGT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCAGAGGCAGAAAGAAATaGGCTAATACAGATGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QLPRISQAACSPAVEGLFRGRKK*ANTDAS Trigger: TGAAGCATCTGTATTAGCGCATTTCTTTCTGCCTCT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR GCA 90 bp | ACATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTGGTCTGCACCACAGAGGCAGAAAGAAATaGGCTAATACAGATGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: TSTQQTLLCHSAGTGLHHRGRKK*ANTDAS Trigger: TGAAGCATCTGTATTAGCGCATTTCTTTCTGCCTCT...GTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR GCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGACTCCTATGCCACAGTaGGGGCACTGGTCTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: SSALTQSTQTSSSFPTSETPMPQ*GHWSAP Trigger: TGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGT...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGGGAGGCAGAGGCAGGTaGATCTCTCAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LELHKSVRWEKASKAITKGGRGR*ISQASL Trigger: CAGGCTGGCCTGAGAGATCCACCTGCCTCTGCCTCC...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTTCTAAGAGTGTTCTaGCATCCACCCAGCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: LNVECHPGSSCQPQPFTGFLRVF*HPPSKH Trigger: GTGTTTGCTGGGTGGATGTCAGAACACTCTTAGAAA...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGTTTCTAAGAGTGTTCTaGCATCCACCCAGCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: GESLKSNNQAGPLIAALRFLRVF*HPPSKH Trigger: GTGTTTGCTGGGTGGATGTCAGAACACTCTTAGAAA...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTGAGTCTCTGAAACACTaGAGTTCAAGCAGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIESLKH*SSSREA Trigger: TGCCTCTCTGCTTGAACTCCAGTGTTTCAGAGACTC...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGCCACAGTGCGGGCACTaGTCTGCACCACTTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LELHKSVRWEKASKAITKPQCGH*SAPLEA Trigger: GGCTTCAAGTGGTGCAGACCAGTGCCCGCACTGTGG...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR GCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGACTCCTATGCCACAGTaGGGGCACTGGTCTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: LELHKSVRWEKASKAITKTPMPQ*GHWSAP Trigger: TGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGT...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCCTACTGCTCCCAGGGTaGAGTCAACTTGGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: KRLVELTSITETKTKLTSLLLPG*SQLGAA Trigger: AGCTGCTCCAAGTTGACTTCACCCTGGGAGCAGTAG...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR GCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGCCAGAAGGTCAGCAGTaGCCTGACTCAGTCAACACA | + |
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Preference number: 2 (lower is better) Translates to: LELHKSVRWEKASKAITKPEGQQ*PDSVNT Trigger: TGTGTTGACTGAGTCAGGGCACTGCTGACCTTCTGG...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCAGGTCAGCAGTGCCCTaGCTCAGTCAACACAAACAA | + |
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Preference number: 2 (lower is better) Translates to: KRLVELTSITETKTKLTSRSAVP*LSQHKQ Trigger: TTGTTTGTGTTGACTGAGTCAGGGCACTGCTGACCT...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR TCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCATTTTGGCCATGACTTaGAATTGGCTCTGTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: KRLVELTSITETKTKLTSILAMT*NWLCPP Trigger: TGGGGGACAGAGCCAATTTCAAGTCATGGCCAAAAT...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCTTAAAACAAAAACCTTaGAAAGACAACGCCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: KRLVELTSITETKTKLTSLKQKP*KDNARR Trigger: CCTTCTGGCGTTGTCTTTCCAAGGTTTTTGTTTTAA...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR CCA 72 bp | CACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTaGTCTGCACCACTTGAAGCCGGAGACCCGCCTACT | + |
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Preference number: 3 (lower is better) Translates to: HPANTPMPQCGH*SAPLEAGDPPT Trigger: AGTAGGCGGGTCTCCGGCTTCAAGTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR GCA 72 bp | ACTACTGCTCCCAGGGTGAAGTCAACTTGGAGCAGCTaGCCCGAATTTCACAGGCTGCGTGCTCACCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: TTAPRVKSTWSS*PEFHRLRAHQP Trigger: CGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACCCTGGGAGCAGTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 72 bp | GGCCGTCAGTGGGCACAGCTACTACTGCTCCCAGGGTaGAGTCAACTTGGAGCAGCTGCCCCGAATTTCACA | + |
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Preference number: 3 (lower is better) Translates to: GRQWAQLLLLPG*SQLGAAAPNFT Trigger: TGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACCCTGGGAGCAGTAGTAGCTGTGCCCACTGACGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR GCA 72 bp | TCTGACATCCACCCAGCAAACACTCCTATGCCACAGTaGGGGCACTGGTCTGCACCACTTGAAGCCGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: SDIHPANTPMPQ*GHWSAPLEAGD Trigger: GTCTCCGGCTTCAAGTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR CCA 72 bp | GGCACAGCTACTACTGCTCCCAGGGTGAAGTCAACTTaGAGCAGCTGCCCCGAATTTCACAGGCTGCGTGCT | + |
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Preference number: 3 (lower is better) Translates to: GTATTAPRVKST*SSCPEFHRLRA Trigger: AGCACGCAGCCTGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACCCTGGGAGCAGTAGTAGCTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR GCA 72 bp | ATGGCTTTTATGGCCGTCAGTGGGCACAGCTACTACTaGTCCCAGGGTGAAGTCAACTTGGAGCAGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: MAFMAVSGHSYY*SQGEVNLEQLP Trigger: GGGCAGCTGCTCCAAGTTGACTTCACCCTGGGAGCAGTAGTAGCTGTGCCCACTGACGGCCATAAAAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CAA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTGGCCATGACTTGAAATaGGCTCTGTCCCCCATGGCA | + |
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Preference number: 3 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIGHDLK*ALSPMA Trigger: TGCCATGGGGGACAGAGCCAATTTCAAGTCATGGCC...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR-3UTR CAA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGGGCCATGACTTGAAATaGGCTCTGTCCCCCATGGCA | + |
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Preference number: 3 (lower is better) Translates to: LELHKSVRWEKASKAITKGHDLK*ALSPMA Trigger: TGCCATGGGGGACAGAGCCAATTTCAAGTCATGGCC...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 72 bp | CCTTGGAAAGACAACGCCAGAAGGTCAGCAGTGCCCTaGCTCAGTCAACACAAACAAGTTCTTCATTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: PWKDNARRSAVP*LSQHKQVLHFQ Trigger: TTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCTGACCTTCTGGCGTTGTCTTTCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 72 bp | GAAAGTGGTCAGGTCTCAATTTTTCTAAGAGTGTTCTaGCATCCACCCAGCAAACACTCCTATGCCACAGTG | + |
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Preference number: 3 (lower is better) Translates to: ESGQVSIFLRVF*HPPSKHSYATV Trigger: CACTGTGGCATAGGAGTGTTTGCTGGGTGGATGTCAGAACACTCTTAGAAAAATTGAGACCTGACCACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR TCA 72 bp | CCAAGGGGTTACAGGGAAATAACAGATTCTCCCATCTaGTTATGCTTACAAGAGAACACAGTGCAACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: PRGYREITDSPI*LCLQENTVQLA Trigger: AGCCAGTTGCACTGTGTTCTCTTGTAAGCATAATCAGATGGGAGAATCTGTTATTTCCCTGTAACCCCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR GCA 72 bp | AAAAACCTTGGAAAGACAACGCCAGAAGGTCAGCAGTaGCCTGACTCAGTCAACACAAACAAGTTCTTCATT | + |
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Preference number: 3 (lower is better) Translates to: KNLGKTTPEGQQ*PDSVNTNKFFI Trigger: AATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCTGACCTTCTGGCGTTGTCTTTCCAAGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR CCA 72 bp | ACAGGATTAGTGTTAGAATTACACAAGTCTGTGCGTTaGGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: TGLVLELHKSVR*EKASKAITKLG Trigger: GCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAACACTAATCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| 3UTR CCA 72 bp | CACAAACAAGTTCTTCATTTCCAACATCCGAGAAAGTaGTCAGGTCTCAATTTTTCTAAGAGTGTTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: HKQVLHFQHPRK*SGLNFSKSVLT Trigger: TGTCAGAACACTCTTAGAAAAATTGAGACCTGACCACTTTCTCGGATGTTGGAAATGAAGAACTTGTTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCCAGAGCTCGTCCGGCTaGCCATGCTGGATGTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFQSSSG*PCWMSG Trigger: GCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTG...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR GCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCTCGTCCGGCTGGCCATaGTGGATGTCCGGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFSSGWP*WMSGCS Trigger: TGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGA...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CCA 90 bp | GGTGAAGTCAACTTGGAGCAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCATCCACAGGACCTTaGCCACGCCGCAAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEVNLEQLPRISQAACSPASTGP*PRRKPG Trigger: TCCTGGCTTGCGGCGTGGCCAAGGTCCTGTGGATGC...TGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| 3UTR CAA 72 bp | GGGCACAGCTACTACTGCTCCCAGGGTGAAGTCAACTaGGAGCAGCTGCCCCGAATTTCACAGGCTGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSYYCSQGEVN*EQLPRISQAAC Trigger: GCACGCAGCCTGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACCCTGGGAGCAGTAGTAGCTGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | GGTGAAGTCAACTTGGAGCAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCACGTCCAGCAGAGGGGTaGTGGGGCTCTCTAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEVNLEQLPRISQAACSPRPAEG*WGSLVC Trigger: ACAGACTAGAGAGCCCCACCACCCCTCTGCTGGACG...TGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGGTTCCCAGGGGCCCTTaGGGAAGCTCGAAGCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GESLKSNNQAGPLIAALRVPRGP*GSSKPN Trigger: GTTCGGCTTCGAGCTTCCTCAAGGGCCCCTGGGAAC...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | ACATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTGGTCTGCACCACTTTTTCTTTGCCTCTTaGGTTGGCTGGCTGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQTLLCHSAGTGLHHFFFAS*VGWLGR Trigger: TCGCCCCAGCCAGCCAACTCAAGAGGCAAAGAAAAA...GTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCAAGATAGGGCTGTCTTaGGAGTCGTCCACATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFKIGLS*ESSTSS Trigger: GGACGATGTGGACGACTCTCAAGACAGCCCTATCTT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGAGCATCCACAGGACCTTaGCCACGCCGCAAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGASTGP*PRRKPG Trigger: TCCTGGCTTGCGGCGTGGCCAAGGTCCTGTGGATGC...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | ACATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTGGTCTGCACCACCTTTGGTCTGGCCATTaGCAAGGTAAGTGTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQTLLCHSAGTGLHHLWSGH*QGKCVG Trigger: CCCGACACACTTACCTTGCCAATGGCCAGACCAAAG...GTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCGCAGCCCAGGATGGATaGTCTGATCTTCTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFAAQDG*SDLLHS Trigger: AGAGTGCAGAAGATCAGACCATCCATCCTGGGCTGC...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | ACATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTGGTCTGCACCACGCAGCCCAGGATGGATaGTCTGATCTTCTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQTLLCHSAGTGLHHAAQDG*SDLLHS Trigger: AGAGTGCAGAAGATCAGACCATCCATCCTGGGCTGC...GTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATCCGGCTGGCCATGCTaGATGTCCGGCTGCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGSGWPC*MSGCSD Trigger: GTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGA...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | GGTGAAGTCAACTTGGAGCAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCACCTTCTCGGGGTCGTTaGAGACCACCTCAAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GEVNLEQLPRISQAACSPPSRGR*RPPQKT Trigger: AGTCTTTTGAGGTGGTCTTCAACGACCCCGAGAAGG...TGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCACTGAGGACAGCTTCTaGGTGAACACTTTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFTEDSF*VNTLVW Trigger: CCAGACCAAAGTGTTCACTCAGAAGCTGTCCTCAGT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCGTCCCTGAGATAATGTaGTTGCCTCTGACTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFVPEIM*LPLTED Trigger: GTCCTCAGTCAGAGGCAATCACATTATCTCAGGGAC...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCAGGAGTATTCGACTTTaGGGATGTTGCAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFRSIRL*GCCSPG Trigger: TCCTGGGCTGCAACATCCTCAAAGTCGAATACTCCT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR GCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTTCGTCCGGCTGGCCATaGTGGATGTCCGGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCRMSPRLQLSTTTLHRISSGWP*WMSGCS Trigger: TGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGA...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCAATTCGAGCAGAGACTaGCACACGTCCATCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFNSSRD*HTSIRN Trigger: ATTCCTGATGGACGTGTGTCAGTCTCTGCTCGAATT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR GCA 90 bp | ACATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTGGTCTGCACCACAGTCCAAAGTCTGTTTaGACTGCTGAGACCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQTLLCHSAGTGLHHSPKSV*TAETLA Trigger: TGCAAGGGTCTCAGCAGTGCAAACAGACTTTGGACT...GTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTCGTCCAGCAGAGGGGTaGTGGGGCTCTCTAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIRPAEG*WGSLVC Trigger: ACAGACTAGAGAGCCCCACCACCCCTCTGCTGGACG...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | ACATCCACCCAGCAAACACTCCTATGCCACAGTGCGGGCACTGGTCTGCACCACTTAGGTCAGGGGTATTaGCATCCACTAGATCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTQQTLLCHSAGTGLHHLGQGY*HPLDPS Trigger: TGATGGATCTAGTGGATGTCAATACCCCTGACCTAA...GTGGTGCAGACCAGTGCCCGCACTGTGGCATAGGAGTGTTTGCTGGGTGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGACTTGAGTTGGCTGGCTaGGGCGATCGAGAAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGLELAG*GDREKP Trigger: AGGCTTTTCTCGATCGCCCCAGCCAGCCAACTCAAG...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGTCCGGCTGGCCATGCTaGATGTCCGGCTGCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSALTQSTQTSSSFPTSESGWPC*MSGCSD Trigger: GTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGA...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGAGGTGGGGGCATGAACTaGAACTCAGGGGCGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGGGGMN*NSGAYI Trigger: TATGTACGCCCCTGAGTTCCAGTTCATGCCCCCACC...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGGGTGGGGGCATGAACTaGAACTCAGGGGCGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: GESLKSNNQAGPLIAALRGGGMN*NSGAYI Trigger: TATGTACGCCCCTGAGTTCCAGTTCATGCCCCCACC...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTGGGGCAGATCAAGGATaGCTTTCTTGGAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIGADQG*LSWSQG Trigger: TCCCTGGCTCCAAGAAAGTCATCCTTGATCTGCCCC...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGAAGATAGGGCTGTCTTaGGAGTCGTCCACATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GESLKSNNQAGPLIAALRKIGLS*ESSTSS Trigger: GGACGATGTGGACGACTCTCAAGACAGCCCTATCTT...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCTTCTCAAAGTCAGCATaGATGGAGATGTCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPRISQAACSPAVEGLFFSKSA*MEMSSP Trigger: AGGTGATGACATCTCCATCCATGCTGACTTTGAGAA...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGAAGGACAGCTTCTGAGTaGACACTTTGGTCTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGRTASE*TLWSGH Trigger: ATGGCCAGACCAAAGTGTTCACTCAGAAGCTGTCCT...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGAGGACAGCTTCTGAGTaGACACTTTGGTCTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GESLKSNNQAGPLIAALRRTASE*TLWSGH Trigger: ATGGCCAGACCAAAGTGTTCACTCAGAAGCTGTCCT...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGACGATGCGCAAGTCCCTaGGATAATGTGATTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGRCASP*DNVIAS Trigger: AGAGGCAATCACATTATCTCAGGGACTTGCGCATCG...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR GCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATCACCTGCTGTAGGCTaGTCTTCTAGGAGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGSPAVG*SSRRSV Trigger: CACACTTCTCCTAGAAGAGCAGCCTACAGCAGGTGA...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGCAGAGCTCGTCCGGCTaGCCATGCTGGATGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LELHKSVRWEKASKAITKQSSSG*PCWMSG Trigger: GCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTG...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGGTCTGTTTGCACTGCTaGGACCCTTGCATCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSALTQSTQTSSSFPTSEVCLHC*DPCIHR Trigger: CCTGTGGATGCAAGGGTCTCAGCAGTGCAAACAGAC...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTAGGAGTATTCGACTTTaGGGATGTTGCAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIRSIRL*GCCSPG Trigger: TCCTGGGCTGCAACATCCTCAAAGTCGAATACTCCT...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR GCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTTTCTCACCTGTAGGCTaGTCTTCTAGGAGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIFSPVG*SSRRSV Trigger: CACACTTCTCCTAGAAGAGCAGCCTACAGGTGAGAA...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049093.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGCTTTGGTCTGGCCATTaGCAAGGTAAGTGTGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSALTQSTQTSSSFPTSELWSGH*QGKCVG Trigger: CCCGACACACTTACCTTGCCAATGGCCAGACCAAAG...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTCACGTCCATCAGGAATaGACATGCAGGAAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIHVHQE*TCRKLS Trigger: AGAAAGTTTCCTGCATGTTCATTCCTGATGGACGTG...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR GCA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGTTCGAAGTTTTTCTTTaGCTCTTGAGTTGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GESLKSNNQAGPLIAALRFEVFL*LLSWLA Trigger: AGCCAGCCAACTCAAGAGGCAAAGAAAAACTTCGAA...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGACTTTCTTCTCCTTTTTaGCAGACACTGGTGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LNVECHPGSSCQPQPFTGLSSPF*QTLVPL Trigger: TAATGGCACCAGTGTCTGCCAAAAAGGAGAAGAAAG...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGAGTCCAAAGTCTGTTTaGACTGCTGAGACCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSALTQSTQTSSSFPTSESPKSV*TAETLA Trigger: TGCAAGGGTCTCAGCAGTGCAAACAGACTTTGGACT...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGCCTTCTCGGGGTCGTTaGAGACCACCTCAAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LELHKSVRWEKASKAITKPSRGR*RPPQKT Trigger: AGTCTTTTGAGGTGGTCTTCAACGACCCCGAGAAGG...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCGTCTGTTTGCACTGCTaGGACCCTTGCATCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLVELTSITETKTKLTSVCLHC*DPCIHR Trigger: CCTGTGGATGCAAGGGTCTCAGCAGTGCAAACAGAC...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGTTTTTCTTTGCCTCTTaGGTTGGCTGGCTGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LELHKSVRWEKASKAITKFFFAS*VGWLGR Trigger: TCGCCCCAGCCAGCCAACTCAAGAGGCAAAGAAAAA...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGTTAGGTCAGGGGTATTaGCATCCACTAGATCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSALTQSTQTSSSFPTSELGQGY*HPLDPS Trigger: TGATGGATCTAGTGGATGTCAATACCCCTGACCTAA...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGCACGTCCATCAGGAATaGACATGCAGGAAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSALTQSTQTSSSFPTSEHVHQE*TCRKLS Trigger: AGAAAGTTTCCTGCATGTTCATTCCTGATGGACGTG...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCGGGGCAGATCAAGGATaGCTTTCTTGGAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRLVELTSITETKTKLTSGADQG*LSWSQG Trigger: TCCCTGGCTCCAAGAAAGTCATCCTTGATCTGCCCC...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCCTTGAGTTGGCTGGCTaGGGCGATCGAGAAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLVELTSITETKTKLTSLELAG*GDREKP Trigger: AGGCTTTTCTCGATCGCCCCAGCCAGCCAACTCAAG...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGGTCCCTGAGATAATGTaGTTGCCTCTGACTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LELHKSVRWEKASKAITKVPEIM*LPLTED Trigger: GTCCTCAGTCAGAGGCAATCACATTATCTCAGGGAC...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGTGTGATCTTCAGGAATaGTGTCCATATAGCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSALTQSTQTSSSFPTSECDLQE*CPYSKE Trigger: CTCCTTGCTATATGGACATCATTCCTGAAGATCACA...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCACTGAGGACAGCTTCTaGGTGAACACTTTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLVELTSITETKTKLTSTEDSF*VNTLVW Trigger: CCAGACCAAAGTGTTCACTCAGAAGCTGTCCTCAGT...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCCGATGCGCAAGTCCCTaGGATAATGTGATTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLVELTSITETKTKLTSRCASP*DNVIAS Trigger: AGAGGCAATCACATTATCTCAGGGACTTGCGCATCG...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR TCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGTGTGATCTTCAGGAATaGTGTCCATATAGCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LELHKSVRWEKASKAITKCDLQE*CPYSKE Trigger: CTCCTTGCTATATGGACATCATTCCTGAAGATCACA...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR GCA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGTTCGAAGTTTTTCTTTaGCTCTTGAGTTGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LELHKSVRWEKASKAITKFEVFL*LLSWLA Trigger: AGCCAGCCAACTCAAGAGGCAAAGAAAAACTTCGAA...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCCAAAGTCAGCATGGATaGAGATGTCATCACCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLVELTSITETKTKLTSQSQHG*RCHHLH Trigger: GTGAAGGTGATGACATCTCCATCCATGCTGACTTTG...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CCA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCTTCTCAAAGTCAGCATaGATGGAGATGTCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLVELTSITETKTKLTSFSKSA*MEMSSP Trigger: AGGTGATGACATCTCCATCCATGCTGACTTTGAGAA...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCTGCATCCACAGGACCTaGGCCACGCCGCAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLPRISQAACSPAVEGLFCIHRT*ATPQAR Trigger: CCTGGCTTGCGGCGTGGCCAAGGTCCTGTGGATGCA...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS GCA 90 bp | AGCTCATCTCAGAGCTCGTCCGGCTGGCCATGCTGGATGTCCGGCTaGTCAGACCAGACCTGCTGCCAATCACTAGGGGCAGATCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSQSSSGWPCWMSG*SDQTCCQSLGADQG Trigger: TCCTTGATCTGCCCCTAGTGATTGGCAGCAGGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTGAGATGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS CCA 90 bp | TTAGGTCTATCCAGCTCATCTCAGAGCTCGTCCGGCTGGCCATGCTaGATGTCCGGCTGCTCAGACCAGACCTGCTGCCAATCACTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLSSSSQSSSGWPC*MSGCSDQTCCQSLG Trigger: CCCTAGTGATTGGCAGCAGGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTGAGATGAGCTGGATAGACCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS CCA 90 bp | CTGGGATGTTTAGGTCTATCCAGCTCATCTCAGAGCTCGTCCGGCTaGCCATGCTGGATGTCCGGCTGCTCAGACCAGACCTGCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGCLGLSSSSQSSSG*PCWMSGCSDQTCCQ Trigger: TTGGCAGCAGGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTGAGATGAGCTGGATAGACCTAAACATCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS GCA 90 bp | TCGACTTTGAGGATGTTGCAGCCCAGGATGGATGGTCTGATCTTCTaGACTCTGAGGCTCTTGCCACGCCACGATGCGCAAGTCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: STLRMLQPRMDGLIF*TLRLLPRHDAQVPE Trigger: CTCAGGGACTTGCGCATCGTGGCGTGGCAAGAGCCTCAGAGTGCAGAAGATCAGACCATCCATCCTGGGCTGCAACATCCTCAAAGTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS GCA 90 bp | TGTTTAGGTCTATCCAGCTCATCTCAGAGCTCGTCCGGCTGGCCATaGTGGATGTCCGGCTGCTCAGACCAGACCTGCTGCCAATCACTA | + |
|
Preference number: 5 (lower is better) Translates to: CLGLSSSSQSSSGWP*WMSGCSDQTCCQSL Trigger: TAGTGATTGGCAGCAGGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTGAGATGAGCTGGATAGACCTAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGTGTTCCCAGGGGCCCTaGAGGAAGCTCGAAGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GESLKSNNQAGPLIAALRCSQGP*RKLEAE Trigger: TTCGGCTTCGAGCTTCCTCAAGGGCCCCTGGGAACA...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS GCA 90 bp | CTAGGAGAAGTGTGTCTTCATAGCGCAAGTAGTCCAAAGTCTGTTTaGACTGCTGAGACCCTTGCATCCACAGGACCTTGGCCACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGEVCLHSASSPKSV*TAETLASTGPWPRR Trigger: GCGGCGTGGCCAAGGTCCTGTGGATGCAAGGGTCTCAGCAGTGCAAACAGACTTTGGACTACTTGCGCTATGAAGACACACTTCTCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS CCA 90 bp | CAGCAAGGAGTATTCGACTTTGAGGATGTTGCAGCCCAGGATGGATaGTCTGATCTTCTGCACTCTGAGGCTCTTGCCACGCCACGATGC | + |
|
Preference number: 5 (lower is better) Translates to: QQGVFDFEDVAAQDG*SDLLHSEALATPRC Trigger: GCATCGTGGCGTGGCAAGAGCCTCAGAGTGCAGAAGATCAGACCATCCATCCTGGGCTGCAACATCCTCAAAGTCGAATACTCCTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATCTTTGCCTCTTGAGTaGGCTGGCTGGGGCGATCGA | + |
|
Preference number: 5 (lower is better) Translates to: LNVECHPGSSCQPQPFTGSLPLE*AGWGDR Trigger: TCGATCGCCCCAGCCAGCCAACTCAAGAGGCAAAGA...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCCTTCGAAGTTTTTCTTaGCCTCTTGAGTTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLPRISQAACSPAVEGLFLRSFS*PLELAG Trigger: GCCAGCCAACTCAAGAGGCAAAGAAAAACTTCGAAG...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | GGTGAAGTCAACTTGGAGCAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAAAGGAGTATTCGACTTaGAGGATGTTGCAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEVNLEQLPRISQAACSPKEYST*RMLQPR Trigger: CCTGGGCTGCAACATCCTCAAAGTCGAATACTCCTT...TGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTGCTCCAAGTTGACTTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS CCA 90 bp | GTTGTTGTTGTTAAGGACGCACGGATCCACCTCAGTGTAAGTGGGTaGGGGCATGAACTGGAACTCAGGGGCGTACATAAAGATAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVVVKDARIHLSVSG*GHELELRGVHKDRA Trigger: AGCCCTATCTTTATGTACGCCCCTGAGTTCCAGTTCATGCCCCCACCCACTTACACTGAGGTGGATCCGTGCGTCCTTAACAACAACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGACCTTCTCGGGGTCGTaGAAGACCACCTCAAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GESLKSNNQAGPLIAALRTFSGS*KTTSKD Trigger: GTCTTTTGAGGTGGTCTTCAACGACCCCGAGAAGGT...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGGCACTGCTGAGACCCTaGCATCCACAGGACCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSALTQSTQTSSSFPTSEALLRP*HPQDLG Trigger: GCCAAGGTCCTGTGGATGCAAGGGTCTCAGCAGTGC...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCCCGAATTTCACAGGCTGCGTGCTCACCAGCCGTGGAAGGTCTTTTCAGCTCGAAGCCGAACTaGTACTCATATTTGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLPRISQAACSPAVEGLFSSKPN*YSYLFP Trigger: TGGAAACAAATATGAGTACAAGTTCGGCTTCGAGCT...GAAAAGACCTTCCACGGCTGGTGAGCACGCAGCCTGTGAAATTCGGGGCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTTCGACTTTGAGGATGTaGCAGCCCAGGATGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: QCRMSPRLQLSTTTLHRISTLRM*QPRMDG Trigger: ACCATCCATCCTGGGCTGCAACATCCTCAAAGTCGA...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS CCA 90 bp | GATCCATCACTTCGAAGTTTTTCTTTGCCTCTTGAGTTGGCTGGCTaGGGCGATCGAGAAAAGCCTTCACCCAGTAGTCTACGCAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: DPSLRSFSLPLELAG*GDREKPSPSSLRNH Trigger: ATGGTTGCGTAGACTACTGGGTGAAGGCTTTTCTCGATCGCCCCAGCCAGCCAACTCAAGAGGCAAAGAAAAACTTCGAAGTGATGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCTGCATCCACAGGACCTaGGCCACGCCGCAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRLVELTSITETKTKLTSCIHRT*ATPQAR Trigger: CCTGGCTTGCGGCGTGGCCAAGGTCCTGTGGATGCA...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGATTAAGGAGTATTCGACTTaGAGGATGTTGCAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCRMSPRLQLSTTTLHRIKEYST*RMLQPR Trigger: CCTGGGCTGCAACATCCTCAAAGTCGAATACTCCTT...AATCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGGCACTGCTGAGACCCTaGCATCCACAGGACCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LELHKSVRWEKASKAITKALLRP*HPQDLG Trigger: GCCAAGGTCCTGTGGATGCAAGGGTCTCAGCAGTGC...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGTGTTCCCAGGGGCCCTaGAGGAAGCTCGAAGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LELHKSVRWEKASKAITKCSQGP*RKLEAE Trigger: TTCGGCTTCGAGCTTCCTCAAGGGCCCCTGGGAACA...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGAACTTTCTTCTCCTTTTaGGCAGACACTGGTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LNVECHPGSSCQPQPFTGTFFSF*ADTGAI Trigger: AATGGCACCAGTGTCTGCCAAAAAGGAGAAGAAAGT...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGTCGACTTTGAGGATGTaGCAGCCCAGGATGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSALTQSTQTSSSFPTSESTLRM*QPRMDG Trigger: ACCATCCATCCTGGGCTGCAACATCCTCAAAGTCGA...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGTTGTTGTTGTTGTTGTaGTTAAGGACGCACGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GESLKSNNQAGPLIAALRLLLLL*LRTHGS Trigger: GGATCCGTGCGTCCTTAACAACAACAACAACAACAA...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGAAAGATAGGGCTGTCTaGAGAGTCGTCCACATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSALTQSTQTSSSFPTSEKDRAV*RVVHIV Trigger: GACGATGTGGACGACTCTCAAGACAGCCCTATCTTT...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAGCCTCAAAAGCAATAACCAAGCTGGGCCTTTGATCGCAGCACTCAGGAACTTGTACTCATATTaGTTTCCAGGCCTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: GESLKSNNQAGPLIAALRNLYSY*FPGLMI Trigger: GATCATGAGGCCTGGAAACAAATATGAGTACAAGTT...CCTGAGTGCTGCGATCAAAGGCCCAGCTTGGTTATTGCTTTTGAGGCTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | CTCAATGTAGAATGTCACCCAGGCTCCAGCTGTCAACCACAACCCTTCACAGGAAACTTGTACTCATATTaGTTTCCAGGCCTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: LNVECHPGSSCQPQPFTGNLYSY*FPGLMI Trigger: GATCATGAGGCCTGGAAACAAATATGAGTACAAGTT...TCCTGTGAAGGGTTGTGGTTGACAGCTGGAGCCTGGGTGACATTCTACATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS TCA 90 bp | CTTTTCTGTCAATTCGAGCAGAGACTGACACACGTCCATCAGGAATaGACATGCAGGAAACTTTCTTCTCCTTTTTGGCAGACACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFCQFEQRLTHVHQE*TCRKLSSPFWQTLV Trigger: CACCAGTGTCTGCCAAAAAGGAGAAGAAAGTTTCCTGCATGTTCATTCCTGATGGACGTGTGTCAGTCTCTGCTCGAATTGACAGAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGAGGATCCTGACGGCTTaGACTCGGGTAACTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LELHKSVRWEKASKAITKRILTA*TRVTSH Trigger: GTGTGAAGTTACCCGAGTCAAAGCCGTCAGGATCCT...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGCCCTGACTCAGTCAACACAAACAAGTTCTTCATTTCCAACATCCGAGACTTTCTTCTCCTTTTaGGCAGACACTGGTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SSALTQSTQTSSSFPTSETFFSF*ADTGAI Trigger: AATGGCACCAGTGTCTGCCAAAAAGGAGAAGAAAGT...CTCGGATGTTGGAAATGAAGAACTTGTTTGTGTTGACTGAGTCAGGGCACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
||
| CDS TCA 90 bp | GTCATCACCTTCACAGAATCCTTTTCTGTCAATTCGAGCAGAGACTaGCACACGTCCATCAGGAATGAACATGCAGGAAACTTTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VITFTESFSVNSSRD*HTSIRNEHAGNFLL Trigger: GAGAAGAAAGTTTCCTGCATGTTCATTCCTGATGGACGTGTGTCAGTCTCTGCTCGAATTGACAGAAAAGGATTCTGTGAAGGTGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CAA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCACCTTCTCGGGGTCGTaGAAGACCACCTCAAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: KRLVELTSITETKTKLTSTFSGS*KTTSKD Trigger: GTCTTTTGAGGTGGTCTTCAACGACCCCGAGAAGGT...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CAA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCAAAGATAGGGCTGTCTaGAGAGTCGTCCACATCGTC | + |
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Preference number: 5 (lower is better) Translates to: KRLVELTSITETKTKLTSKDRAV*RVVHIV Trigger: GACGATGTGGACGACTCTCAAGACAGCCCTATCTTT...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CAA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCCTTCGAAGTTTTTCTTaGCCTCTTGAGTTGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: KRLVELTSITETKTKLTSLRSFS*PLELAG Trigger: GCCAGCCAACTCAAGAGGCAAAGAAAAACTTCGAAG...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CAA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGACCACCTCAAAAGACTaGATCTTCTTGAACATCACC | + |
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Preference number: 5 (lower is better) Translates to: LELHKSVRWEKASKAITKTTSKD*IFLNIT Trigger: GGTGATGTTCAAGAAGATCAAGTCTTTTGAGGTGGT...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CAA 90 bp | TTAGAATTACACAAGTCTGTGCGTTGGGAGAAAGCCTCAAAAGCAATAACCAAGAGCTCGAAGCCGAACTaGTACTCATATTTGTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LELHKSVRWEKASKAITKSSKPN*YSYLFP Trigger: TGGAAACAAATATGAGTACAAGTTCGGCTTCGAGCT...CTTGGTTATTGCTTTTGAGGCTTTCTCCCAACGCACAGACTTGTGTAATTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CAA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCTTGTTGTTGTTGTTGTaGTTAAGGACGCACGGATCC | + |
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Preference number: 5 (lower is better) Translates to: KRLVELTSITETKTKLTSLLLLL*LRTHGS Trigger: GGATCCGTGCGTCCTTAACAACAACAACAACAACAA...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS-3UTR CAA 90 bp | AAGAGACTGGTGGAGCTTACATCTATAACGGAGACTAAAACAAAATTGACAAGCACCACCTCAAAAGACTaGATCTTCTTGAACATCACC | + |
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Preference number: 5 (lower is better) Translates to: KRLVELTSITETKTKLTSTTSKD*IFLNIT Trigger: GGTGATGTTCAAGAAGATCAAGTCTTTTGAGGTGGT...GCTTGTCAATTTTGTTTTAGTCTCCGTTATAGATGTAAGCTCCACCAGTCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS GCA 72 bp | CAGAGCTCGTCCGGCTGGCCATGCTGGATGTCCGGCTaGTCAGACCAGACCTGCTGCCAATCACTAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QSSSGWPCWMSG*SDQTCCQSLGA Trigger: TGCCCCTAGTGATTGGCAGCAGGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS GCA 72 bp | CTATCCAGCTCATCTCAGAGCTCGTCCGGCTGGCCATaGTGGATGTCCGGCTGCTCAGACCAGACCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSSSSQSSSGWP*WMSGCSDQTCC Trigger: GCAGCAGGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTGAGATGAGCTGGATAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CCA 72 bp | TCCAGCTCATCTCAGAGCTCGTCCGGCTGGCCATGCTaGATGTCCGGCTGCTCAGACCAGACCTGCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SSSSQSSSGWPC*MSGCSDQTCCQ Trigger: TTGGCAGCAGGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTGAGATGAGCTGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CCA 72 bp | TTAGGTCTATCCAGCTCATCTCAGAGCTCGTCCGGCTaGCCATGCTGGATGTCCGGCTGCTCAGACCAGACC | + |
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Preference number: 6 (lower is better) Translates to: LGLSSSSQSSSG*PCWMSGCSDQT Trigger: GGTCTGGTCTGAGCAGCCGGACATCCAGCATGGCCAGCCGGACGAGCTCTGAGATGAGCTGGATAGACCTAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CAA 90 bp | ATCCACAGGACCTTGGCCACGCCGCAAGCCAGGATCCTGACGGCTTaGACTCGGGTAACTTCACACACTTCCACTATTACCCGTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: IHRTLATPQARILTA*TRVTSHTSTITRPA Trigger: GGCCGGACGGGTAATAGTGGAAGTGTGTGAAGTTACCCGAGTCAAAGCCGTCAGGATCCTGGCTTGCGGCGTGGCCAAGGTCCTGTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CAA 90 bp | TTCATAGCGCAAGTAGTCCAAAGTCTGTTTGCACTGCTGAGACCCTaGCATCCACAGGACCTTGGCCACGCCGCAAGCCAGGATCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: FIAQVVQSLFALLRP*HPQDLGHAASQDPD Trigger: GTCAGGATCCTGGCTTGCGGCGTGGCCAAGGTCCTGTGGATGCAAGGGTCTCAGCAGTGCAAACAGACTTTGGACTACTTGCGCTATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS TCA 72 bp | TGGAACTCAGGGGCGTACATAAAGATAGGGCTGTCTTaGGAGTCGTCCACATCGTCCAGCAGAGGGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: WNSGAYIKIGLS*ESSTSSSRGVV Trigger: CACCACCCCTCTGCTGGACGATGTGGACGACTCTCAAGACAGCCCTATCTTTATGTACGCCCCTGAGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CAA 72 bp | ACCTTGGCCACGCCGCAAGCCAGGATCCTGACGGCTTaGACTCGGGTAACTTCACACACTTCCACTATTACC | + |
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Preference number: 6 (lower is better) Translates to: TLATPQARILTA*TRVTSHTSTIT Trigger: GGTAATAGTGGAAGTGTGTGAAGTTACCCGAGTCAAAGCCGTCAGGATCCTGGCTTGCGGCGTGGCCAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CAA 72 bp | CTGGAACTCAGGGGCGTACATAAAGATAGGGCTGTCTaGAGAGTCGTCCACATCGTCCAGCAGAGGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LELRGVHKDRAV*RVVHIVQQRGG Trigger: ACCACCCCTCTGCTGGACGATGTGGACGACTCTCAAGACAGCCCTATCTTTATGTACGCCCCTGAGTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CCA 72 bp | GTTAAGGACGCACGGATCCACCTCAGTGTAAGTGGGTaGGGGCATGAACTGGAACTCAGGGGCGTACATAAA | + |
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Preference number: 6 (lower is better) Translates to: VKDARIHLSVSG*GHELELRGVHK Trigger: TTTATGTACGCCCCTGAGTTCCAGTTCATGCCCCCACCCACTTACACTGAGGTGGATCCGTGCGTCCTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CCA 72 bp | GTATTCGACTTTGAGGATGTTGCAGCCCAGGATGGATaGTCTGATCTTCTGCACTCTGAGGCTCTTGCCACG | + |
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Preference number: 6 (lower is better) Translates to: VFDFEDVAAQDG*SDLLHSEALAT Trigger: CGTGGCAAGAGCCTCAGAGTGCAGAAGATCAGACCATCCATCCTGGGCTGCAACATCCTCAAAGTCGAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS TCA 72 bp | GGGTGGTGGGGCTCTCTAGTCTGTGATCTTCAGGAATaGTGTCCATATAGCAAGGAGGAGCTTCTGGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: GWWGSLVCDLQE*CPYSKEELLGY Trigger: ATACCCCAGAAGCTCCTCCTTGCTATATGGACATCATTCCTGAAGATCACAGACTAGAGAGCCCCACCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CCA 72 bp | CTTCGAAGTTTTTCTTTGCCTCTTGAGTTGGCTGGCTaGGGCGATCGAGAAAAGCCTTCACCCAGTAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: LRSFSLPLELAG*GDREKPSPSSL Trigger: TAGACTACTGGGTGAAGGCTTTTCTCGATCGCCCCAGCCAGCCAACTCAAGAGGCAAAGAAAAACTTCGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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| CDS CCA 72 bp | ACCACGATTCGGGAACACGTGTTCTCAAAGTCAGCATaGATGGAGATGTCATCACCTTCACAGAATCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: TTIREHVFSKSA*MEMSSPSQNPF Trigger: AAAAGGATTCTGTGAAGGTGATGACATCTCCATCCATGCTGACTTTGAGAACACGTGTTCCCGAATCGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049093.8 ENSMUST00000074519.13 |
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