Pregenerated sensors for TXNDC9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058407Ensembl transcript IDs: ENSMUST00000162031.8, ENSMUST00000192960.6, ENSMUST00000193832.6, ENSMUST00000195247.6
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATTCACCAGAACAGCCTGGCTTACCTGAAGGAACCCCTCACCACTaGGCACTGCTGTGCTTGGTGGCCTTGGAGGTCAGAAGGCATCAG | + |
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Preference number: 1 (lower is better) Translates to: NSPEQPGLPEGTPHH*ALLCLVALEVRRHQ Trigger: CTGATGCCTTCTGACCTCCAAGGCCACCAAGCACAGCAGTGCTCAGTGGTGAGGGGTTCCTTCAGGTAAGCCAGGCTGTTCTGGTGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR GCA 90 bp | TCTGGTCCTGGCATCCAGGGCAGGGTTTTTCCCTGTGCACTGTACTaGCCTAACTTGTCTCTTGCACGTAGCCCTCCCACTCTCCATAAC | + |
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Preference number: 1 (lower is better) Translates to: SGPGIQGRVFPCALY*PNLSLARSPPTLHN Trigger: GTTATGGAGAGTGGGAGGGCTACGTGCAAGAGACAAGTTAGGGCAGTACAGTGCACAGGGAAAAACCCTGCCCTGGATGCCAGGACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR GCA 90 bp | GTCCTAGAATGGGAGCTAGTGGATGGCTGTGTGCCACCATGTAGGTaGCAGGAAGCCATCTCAAGTGCTCTTAACTGCCGAGCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: VLEWELVDGCVPPCR*QEAISSALNCRAFS Trigger: AGAGAAGGCTCGGCAGTTAAGAGCACTTGAGATGGCTTCCTGGCACCTACATGGTGGCACACAGCCATCCACTAGCTCCCATTCTAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | TCTGGAGGAAACAGCCTCGTCAAAGCCCACATCTGGTGGGCTTCTTaGAAGGTGGGTGTGTCAATTCACCAGAACAGCCTGGCTTACCTG | + |
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Preference number: 1 (lower is better) Translates to: SGGNSLVKAHIWWAS*KVGVSIHQNSLAYL Trigger: CAGGTAAGCCAGGCTGTTCTGGTGAATTGACACACCCACCTTCCAAGAAGCCCACCAGATGTGGGCTTTGACGAGGCTGTTTCCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | TTAGTTCACAAGTTCCGGAGGCAGATCTCTAGTTCAAGGCCAGCCTaGCCTACAGAGGGCAATGTAGAAAGTCCCCGTCCCAACCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LVHKFRRQISSSRPA*PTEGNVESPRPNLP Trigger: GGGAAGGTTGGGACGGGGACTTTCTACATTGCCCTCTGTAGGCCAGGCTGGCCTTGAACTAGAGATCTGCCTCCGGAACTTGTGAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR GCA 90 bp | GTGCCACCATGTAGGTGCCAGGAAGCCATCTCAAGTGCTCTTAACTaGCGAGCCTTCTCTCCAGCCCCTTTGTGTTGTTTTAGACTGCTC | + |
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Preference number: 1 (lower is better) Translates to: VPPCRCQEAISSALN*RAFSPAPLCCFRLL Trigger: GAGCAGTCTAAAACAACACAAAGGGGCTGGAGAGAAGGCTCGGCAGTTAAGAGCACTTGAGATGGCTTCCTGGCACCTACATGGTGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | CTGAAACCCATTCCACGAAGCGGATCACGGACAAGGAAGTGCATGTaGTGCCCAGTGGATGGTCACTCATTGGCTCTTACAATAGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: LKPIPRSGSRTRKCM*CPVDGHSLALTIVG Trigger: GCCCACTATTGTAAGAGCCAATGAGTGACCATCCACTGGGCACCACATGCACTTCCTTGTCCGTGATCCGCTTCGTGGAATGGGTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | AGGTTGTCTGTTGGATGGCTGTTCTCCATTCTCAGACTCCAAGTGTaGCTCAGTTCCCTCTCAAGGTGGTGCCTGGATCCTGCCTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: RLSVGWLFSILRLQV*LSSLSRWCLDPAFS Trigger: TGAGAAGGCAGGATCCAGGCACCACCTTGAGAGGGAACTGAGCCACACTTGGAGTCTGAGAATGGAGAACAGCCATCCAACAGACAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | TTCTCCATTCTCAGACTCCAAGTGTGGCTCAGTTCCCTCTCAAGGTaGTGCCTGGATCCTGCCTTCTCAGTCGCAGTAACACAAATGGGA | + |
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Preference number: 1 (lower is better) Translates to: FSILRLQVWLSSLSR*CLDPAFSVAVTQMG Trigger: TCCCATTTGTGTTACTGCGACTGAGAAGGCAGGATCCAGGCACCACCTTGAGAGGGAACTGAGCCACACTTGGAGTCTGAGAATGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR GCA 90 bp | CAGTTCCTGAAACCCATTCCACGAAGCGGATCACGGACAAGGAAGTaGATGTGGTGCCCAGTGGATGGTCACTCATTGGCTCTTACAATA | + |
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Preference number: 1 (lower is better) Translates to: QFLKPIPRSGSRTRK*MWCPVDGHSLALTI Trigger: TATTGTAAGAGCCAATGAGTGACCATCCACTGGGCACCACATGCACTTCCTTGTCCGTGATCCGCTTCGTGGAATGGGTTTCAGGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | AGTCGCAGTAACACAAATGGGATTCCTCTCTACTGCAAACTCGTCTaGAGGAAACAGCCTCGTCAAAGCCCACATCTGGTGGGCTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: SRSNTNGIPLYCKLV*RKQPRQSPHLVGFL Trigger: CAAGAAGCCCACCAGATGTGGGCTTTGACGAGGCTGTTTCCTCCAGACGAGTTTGCAGTAGAGAGGAATCCCATTTGTGTTACTGCGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | TGTGGGAGCAACCGAGACATCACATTGTCTCTGCTTTTGTCTTGCTaGAAGAATGTAGCTATGGGAGCTTGCCTGCTGGTGCTGCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: CGSNRDITLSLLLSC*KNVAMGACLLVLQS Trigger: AGACTGCAGCACCAGCAGGCAAGCTCCCATAGCTACATTCTTCCAGCAAGACAAAAGCAGAGACAATGTGATGTCTCGGTTGCTCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CCA 90 bp | ACGAAGCGGATCACGGACAAGGAAGTGCATGTGGTGCCCAGTGGATaGTCACTCATTGGCTCTTACAATAGTGGGCAAATTCCTATCTCT | + |
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Preference number: 1 (lower is better) Translates to: TKRITDKEVHVVPSG*SLIGSYNSGQIPIS Trigger: AGAGATAGGAATTTGCCCACTATTGTAAGAGCCAATGAGTGACCATCCACTGGGCACCACATGCACTTCCTTGTCCGTGATCCGCTTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR GCA 90 bp | CTCATAATGTGCGTGTGCAATGAGGACTATTTAAATAAGGCGATGTaGTCACACCCTGGGTTTCCTGCCGCTATCATCAGCAGAGTCACC | + |
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Preference number: 1 (lower is better) Translates to: LIMCVCNEDYLNKAM*SHPGFPAAIISRVT Trigger: GGTGACTCTGCTGATGATAGCGGCAGGAAACCCAGGGTGTGAGCACATCGCCTTATTTAAATAGTCCTCATTGCACACGCACATTATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR TCA 90 bp | GACTCTTCCTGTGTGGCACCTCACTGTTTACATTTCTACACACATTaGCAGACTCATGGGATGAACTATTATCAGCCTGGAATCAGCATA | + |
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Preference number: 1 (lower is better) Translates to: DSSCVAPHCLHFYTH*QTHGMNYYQPGISI Trigger: TATGCTGATTCCAGGCTGATAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGTGCCACACAGGAAGAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR GCA 90 bp | CAAAAACGGTTTAATTATATTTTTGCAGGTCTCATAATGTGCGTGTaGAATGAGGACTATTTAAATAAGGCGATGTGCTCACACCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QKRFNYIFAGLIMCV*NEDYLNKAMCSHPG Trigger: CCCAGGGTGTGAGCACATCGCCTTATTTAAATAGTCCTCATTGCACACGCACATTATGAGACCTGCAAAAATATAATTAAACCGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR TCA 90 bp | AAGTTTTGTGGTAAGTGCCTTTCTCCATTGAGCCATCTCAGTAGTTaGTGCTATACTCTTTTCTTACCAAGGCTTATTTATTTCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: KFCGKCLSPLSHLSS*CYTLFLPRLIYFWA Trigger: TGCCCAGAAATAAATAAGCCTTGGTAAGAAAAGAGTATAGCATCAACTACTGAGATGGCTCAATGGAGAAAGGCACTTACCACAAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR TCA 90 bp | GTATTTCATGATGAGATGAGTAACACCAGGATAAAAGAATCGCTATaGGTTGAACAAAAGTTAAATACAAGGGTAGGCCAGAAGGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: VFHDEMSNTRIKESL*VEQKLNTRVGQKVK Trigger: TTTGACCTTCTGGCCTACCCTTGTATTTAACTTTTGTTCAACTCATAGCGATTCTTTTATCCTGGTGTTACTCATCTCATCATGAAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTTGCCTGCTGGTGCTGCAGTCTTCAGGATCTGTGGCCGTACCGCTACCTAGTTCCCTCTCAAGGTaGTGCCTGGATCCTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GACLLVLQSSGSVAVPLPSSLSR*CLDPAF Trigger: GAAGGCAGGATCCAGGCACCACCTTGAGAGGGAACT...AGGTAGCGGTACGGCCACAGATCCTGAAGACTGCAGCACCAGCAGGCAAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATAGGCTGCTGTGGTGGTCTCCCAAGTGCACTGGGAGTGTGGGAGCAACCGGTGGTGCCCAGTGGATaGTCACTCATTGGCTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LIGCCGGLPSALGVWEQPVVPSG*SLIGSY Trigger: GTAAGAGCCAATGAGTGACCATCCACTGGGCACCAC...CGGTTGCTCCCACACTCCCAGTGCACTTGGGAGACCACCACAGCAGCCTATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCTGCTGGTGCTGCAGTCTTCAGGATCTGTGGCCGTACCGCTACCTAGATCACTGCTGTGCTTGGTaGCCTTGGAGGTCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LACWCCSLQDLWPYRYLDHCCAW*PWRSEG Trigger: GCCTTCTGACCTCCAAGGCCACCAAGCACAGCAGTG...ATCTAGGTAGCGGTACGGCCACAGATCCTGAAGACTGCAGCACCAGCAGGCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATAGGCTGCTGTGGTGGTCTCCCAAGTGCACTGGGAGTGTGGGAGCAACCGATCTGGTGGGCTTCTTaGAAGGTGGGTGTGTCAATT | + |
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Preference number: 2 (lower is better) Translates to: LIGCCGGLPSALGVWEQPIWWAS*KVGVSI Trigger: AATTGACACACCCACCTTCCAAGAAGCCCACCAGAT...CGGTTGCTCCCACACTCCCAGTGCACTTGGGAGACCACCACAGCAGCCTATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTAATCTGGTCCTGGCATCCAGGGCAGGGTTTTTCCCTGTGCACTGTACTGTCTCAAGGTGGTGCCTaGATCCTGCCTTCTCAGTCG | + |
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Preference number: 2 (lower is better) Translates to: DVIWSWHPGQGFSLCTVLSQGGA*ILPSQS Trigger: CGACTGAGAAGGCAGGATCCAGGCACCACCTTGAGA...CAGTACAGTGCACAGGGAAAAACCCTGCCCTGGATGCCAGGACCAGATTACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTTGGGAGGCAGAGACAGTCAGATTTCTGAGTTCGAGGCAGCCTGGTCTGTGTCACCTCAGCACTaGAAGCATGACACTACACAG | + |
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Preference number: 2 (lower is better) Translates to: QHLGGRDSQISEFEAAWSVSPQH*KHDTTQ Trigger: CTGTGTAGTGTCATGCTTGCAGTGCTGAGGTGACAC...AGACCAGGCTGCCTCGAACTCAGAAATCTGACTGTCTCTGCCTCCCAAGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGATTCCTCTCTACTGCAAACTCGTCTGGAGGAAACAGCCTCGTCAAAGCCCTGTGCTTGGTGGCCTTaGAGGTCAGAAGGCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: WDSSLLQTRLEETASSKPCAWWP*RSEGIR Trigger: TCTGATGCCTTCTGACCTCCAAGGCCACCAAGCACA...GGGCTTTGACGAGGCTGTTTCCTCCAGACGAGTTTGCAGTAGAGAGGAATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CAA 90 bp | GCACGTAGCCCTCCCACTCTCCATAACCATCTCCTAGGTTGTCTGTaGGATGGCTGTTCTCCATTCTCAGACTCCAAGTGTGGCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: ARSPPTLHNHLLGCL*DGCSPFSDSKCGSV Trigger: AACTGAGCCACACTTGGAGTCTGAGAATGGAGAACAGCCATCCAACAGACAACCTAGGAGATGGTTATGGAGAGTGGGAGGGCTACGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR CAA 90 bp | GGAGTGTGGGAGCAACCGAGACATCACATTGTCTCTGCTTTTGTCTaGCTGGAAGAATGTAGCTATGGGAGCTTGCCTGCTGGTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GVWEQPRHHIVSAFV*LEECSYGSLPAGAA Trigger: TGCAGCACCAGCAGGCAAGCTCCCATAGCTACATTCTTCCAGCAAGACAAAAGCAGAGACAATGTGATGTCTCGGTTGCTCCCACACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR TCA 90 bp | ATTATAAGTATCTTTGTGGTGATGGAGATGACACCCCGGCCCTCTGCATGCTGGAGTGGTCAAGAGCACTaGCTGCTCTTCCAGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: IISIFVVMEMTPRPSACWSGQEH*LLFQRS Trigger: GGACCTCTGGAAGAGCAGTCAGTGCTCTTGACCACT...CCAGCATGCAGAGGGCCGGGGTGTCATCTCCATCACCACAAAGATACTTATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTTGGGAGGCAGAGACAGTCAGATTTCTGAGTTCGAGGCAGCCTGGTCTAAAGGTCTGTGTCCCTaGTTACCTAACCCTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: QHLGGRDSQISEFEAAWSKGLCP*LPNPAK Trigger: TTTTGCAGGGTTAGGTAAGCAGGGACACAGACCTTT...AGACCAGGCTGCCTCGAACTCAGAAATCTGACTGTCTCTGCCTCCCAAGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCGTGTGCAATGAGGACTATTTAAATAAGGCGATGTGCTCACACCCTGGGACAAGGAAGTGCATGTaGTGCCCAGTGGATGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: MCVCNEDYLNKAMCSHPGTRKCM*CPVDGH Trigger: GTGACCATCCACTGGGCACCACATGCACTTCCTTGT...CCCAGGGTGTGAGCACATCGCCTTATTTAAATAGTCCTCATTGCACACGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAAGGGCAAGGGGAGTCTCAGGGGCTGATGTGATGGTGAAGGCTGTTGAAAGGTTGTCTGTTGGATaGCTGTTCTCCATTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ERRARGVSGADVMVKAVERLSVG*LFSILR Trigger: TCTGAGAATGGAGAACAGCCATCCAACAGACAACCT...TTCAACAGCCTTCACCATCACATCAGCCCCTGAGACTCCCCTTGCCCTTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAAGGGCAAGGGGAGTCTCAGGGGCTGATGTGATGGTGAAGGCTGTTGAAAGCCATCTCAGTAGTTaGTGCTATACTCTTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: ERRARGVSGADVMVKAVESHLSS*CYTLFL Trigger: TAAGAAAAGAGTATAGCATCAACTACTGAGATGGCT...TTCAACAGCCTTCACCATCACATCAGCCCCTGAGACTCCCCTTGCCCTTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGATGGCTGTGTGCCACCATGTAGGTGCCAGGAAGCCATCTCAAGTGCTCTTGTTATACACAATGACTaGAGACAAAATGGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: VDGCVPPCRCQEAISSALVIHND*RQNGQT Trigger: TGTTTGACCATTTTGTCTGCAGTCATTGTGTATAAC...AAGAGCACTTGAGATGGCTTCCTGGCACCTACATGGTGGCACACAGCCATCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTTGGGAGGCAGAGACAGTCAGATTTCTGAGTTCGAGGCAGCCTGGTCTGTTATACACAATGACTaGAGACAAAATGGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: QHLGGRDSQISEFEAAWSVIHND*RQNGQT Trigger: TGTTTGACCATTTTGTCTGCAGTCATTGTGTATAAC...AGACCAGGCTGCCTCGAACTCAGAAATCTGACTGTCTCTGCCTCCCAAGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTGACCAGAGGGTTATGTGTGTGTGTGAGTATTATAATTCCAGCTGTGAGGTCAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VSDQRVMCVCEYYNSSCEVKSTD*SSRGPE Trigger: CTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTGAC...CTCACAGCTGGAATTATAATACTCACACACACACATAACCCTCTGGTCACTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGACCAGAGGGTTATGTGTGTGTGTGAGTATTATAATTCCAGCTGTGAGCAAGGGCTAGAAAGATaGCTCAGTGGTCAAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: VSDQRVMCVCEYYNSSCEQGLER*LSGQEH Trigger: GTGCTCTTGACCACTGAGCCATCTTTCTAGCCCTTG...CTCACAGCTGGAATTATAATACTCACACACACACATAACCCTCTGGTCACTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR CAA 90 bp | CGACTCTTCCTGTGTGGCACCTCACTGTTTACATTTCTACACACATaGACAGACTCATGGGATGAACTATTATCAGCCTGGAATCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: RLFLCGTSLFTFLHT*TDSWDELLSAWNQH Trigger: ATGCTGATTCCAGGCTGATAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGTGCCACACAGGAAGAGTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTCTCAAACCCCAAGACCCCTGTAGTTCAACTCATTTGTATTTCCTGTATGTCTTTAACAGTTCCTaGAACCCATTCCACGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: TALKPQDPCSSTHLYFLYVFNSS*NPFHEA Trigger: CGCTTCGTGGAATGGGTTTCAGGAACTGTTAAAGAC...ATACAGGAAATACAAATGAGTTGAACTACAGGGGTCTTGGGGTTTGAGAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTCTCAAACCCCAAGACCCCTGTAGTTCAACTCATTTGTATTTCCTGTATGCAGGTCTCATAATGTaGGTGTGCAATGAGGACTAT | + |
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Preference number: 2 (lower is better) Translates to: TALKPQDPCSSTHLYFLYAGLIM*VCNEDY Trigger: ATAGTCCTCATTGCACACGCACATTATGAGACCTGC...ATACAGGAAATACAAATGAGTTGAACTACAGGGGTCTTGGGGTTTGAGAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTCTCAAACCCCAAGACCCCTGTAGTTCAACTCATTTGTATTTCCTGTATAAGTTTTGTGGTAAGTaGCTTTCTCCATTGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: TALKPQDPCSSTHLYFLYKFCGK*LSPLSH Trigger: ATGGCTCAATGGAGAAAGGCACTTACCACAAAACTT...ATACAGGAAATACAAATGAGTTGAACTACAGGGGTCTTGGGGTTTGAGAGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACTGTTTACATTTCTACACACATTGACAGACTCATGGGATGAACTATTAAGAAAGATGGCTCAGTaGTCAAGAGCACTGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: TSLFTFLHTLTDSWDELLRKMAQ*SRALTA Trigger: AGCAGTCAGTGCTCTTGACCACTGAGCCATCTTTCT...TAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR TCA 90 bp | ACCTCACTGTTTACATTTCTACACACATTGACAGACTCATGGGATGAACTATTATGCTTGGATTACAAATaGGATCTATGGTGCCACCCA | + |
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Preference number: 2 (lower is better) Translates to: TSLFTFLHTLTDSWDELLCLDYK*DLWCHP Trigger: TGGGTGGCACCATAGATCTCATTTGTAATCCAAGCA...TAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR TCA 90 bp | CAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGACTTTATCCCCTTCAAACTaGAAGTTACCACCTGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: QTLPGNLKYVSLKLYTMTLSPSN*KLPPAF Trigger: GAACGCAGGTGGTAACTTTCAGTTTGAAGGGGATAA...AGTCATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTACATTTCTACACACATTGACAGACTCATGGGATGAACTATTATCAGCCGATCACATTGCTGTATaGAGTGAGAAATTTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LFTFLHTLTDSWDELLSADHIAV*SEKFLS Trigger: GGAAAGAAATTTCTCACTGCATACAGCAATGTGATC...GGCTGATAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTACATTTCTACACACATTGACAGACTCATGGGATGAACTATTATCAGCCTCTGAAATGTCACTTTaGGCTTCCAAAATTCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LFTFLHTLTDSWDELLSASEMSL*ASKIRF Trigger: GAAACGAATTTTGGAAGCCCAAAGTGACATTTCAGA...GGCTGATAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
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| 3UTR CAA 90 bp | TGTCACTTTGGGCTTCCAAAATTCGTTTCAGTAACATTTCTTAGGTaGAAAGCTTCTAGGTCACCTCTAAGCCTGTCTTTAACTATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: CHFGLPKFVSVTFLR*KASRSPLSLSLTIN Trigger: ATTTATAGTTAAAGACAGGCTTAGAGGTGACCTAGAAGCTTTCAACCTAAGAAATGTTACTGAAACGAATTTTGGAAGCCCAAAGTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCACTGTTTACATTTCTACACACATTGACAGACTCATGGGATGAACTATTATCAAGTTATACACAATaGCTGCAGACAAAATGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSLFTFLHTLTDSWDELLSSYTQ*LQTKWS Trigger: TGACCATTTTGTCTGCAGTCATTGTGTATAACTTGA...TAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR CCA 72 bp | ACTGGATCCCCAGAAGTGGCTGATAGGCTGCTGTGGTaGTCTCCCAAGTGCACTGGGAGTGTGGGAGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: TGSPEVADRLLW*SPKCTGSVGAT Trigger: GGTTGCTCCCACACTCCCAGTGCACTTGGGAGACCACCACAGCAGCCTATCAGCCACTTCTGGGGATCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | TGGACTGGATCCCCAGAAGTGGCTGATAGGCTGCTGTaGTGGTCTCCCAAGTGCACTGGGAGTGTGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WTGSPEVADRLL*WSPKCTGSVGA Trigger: TGCTCCCACACTCCCAGTGCACTTGGGAGACCACCACAGCAGCCTATCAGCCACTTCTGGGGATCCAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTTGCCTGCTGGTGCTGCAGTCTTCAGGATCTGTGGCCGTACCGCTACCTCATCTGGTGGGCTTCTaGGAAGGTGGGTGTGTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GACLLVLQSSGSVAVPLPHLVGF*EGGCVN Trigger: ATTGACACACCCACCTTCCAAGAAGCCCACCAGATG...AGGTAGCGGTACGGCCACAGATCCTGAAGACTGCAGCACCAGCAGGCAAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | GAGCTTGCCTGCTGGTGCTGCAGTCTTCAGGATCTGTaGCCGTACCGCTACCTAGATAACATCACCAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: ELACWCCSLQDL*PYRYLDNITSR Trigger: CCGGCTGGTGATGTTATCTAGGTAGCGGTACGGCCACAGATCCTGAAGACTGCAGCACCAGCAGGCAAGCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | GGCATCCAGGGCAGGGTTTTTCCCTGTGCACTGTACTaGCCTAACTTGTCTCTTGCACGTAGCCCTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: GIQGRVFPCALY*PNLSLARSPPT Trigger: AGTGGGAGGGCTACGTGCAAGAGACAAGTTAGGGCAGTACAGTGCACAGGGAAAAACCCTGCCCTGGATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | CTGAAGGAACCCCTCACCACTGAGCACTGCTGTGCTTaGTGGCCTTGGAGGTCAGAAGGCATCAGAGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LKEPLTTEHCCA*WPWRSEGIRVL Trigger: TAGGACTCTGATGCCTTCTGACCTCCAAGGCCACCAAGCACAGCAGTGCTCAGTGGTGAGGGGTTCCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | AAGTTCCGGAGGCAGATCTCTAGTTCAAGGCCAGCCTaGCCTACAGAGGGCAATGTAGAAAGTCCCCGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KFRRQISSSRPA*PTEGNVESPRP Trigger: GGGACGGGGACTTTCTACATTGCCCTCTGTAGGCCAGGCTGGCCTTGAACTAGAGATCTGCCTCCGGAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | TGGGAGCTAGTGGATGGCTGTGTGCCACCATGTAGGTaGCAGGAAGCCATCTCAAGTGCTCTTAACTGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: WELVDGCVPPCR*QEAISSALNCR Trigger: TCGGCAGTTAAGAGCACTTGAGATGGCTTCCTGGCACCTACATGGTGGCACACAGCCATCCACTAGCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | TGGCCTTGGAGGTCAGAAGGCATCAGAGTCCTAGAATaGGAGCTAGTGGATGGCTGTGTGCCACCATGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: WPWRSEGIRVLE*ELVDGCVPPCR Trigger: CCTACATGGTGGCACACAGCCATCCACTAGCTCCCATTCTAGGACTCTGATGCCTTCTGACCTCCAAGGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | AAGGAACCCCTCACCACTGAGCACTGCTGTGCTTGGTaGCCTTGGAGGTCAGAAGGCATCAGAGTCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KEPLTTEHCCAW*PWRSEGIRVLE Trigger: TTCTAGGACTCTGATGCCTTCTGACCTCCAAGGCCACCAAGCACAGCAGTGCTCAGTGGTGAGGGGTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | CTCAGACTCCAAGTGTGGCTCAGTTCCCTCTCAAGGTaGTGCCTGGATCCTGCCTTCTCAGTCGCAGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: LRLQVWLSSLSR*CLDPAFSVAVT Trigger: TGTTACTGCGACTGAGAAGGCAGGATCCAGGCACCACCTTGAGAGGGAACTGAGCCACACTTGGAGTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | GGCTGCTGTGGTGGTCTCCCAAGTGCACTGGGAGTGTaGGAGCAACCGAGACATCACATTGTCTCTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GCCGGLPSALGV*EQPRHHIVSAF Trigger: AAAAGCAGAGACAATGTGATGTCTCGGTTGCTCCCACACTCCCAGTGCACTTGGGAGACCACCACAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR TCA 72 bp | ATCCCACTACTCACGAGGCAGAGGCAGGCAGATCTCTaGGTTAAGGCTACCCTGGTCTACAGAGAGAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IPLLTRQRQADL*VKATLVYRESS Trigger: GGAACTCTCTCTGTAGACCAGGGTAGCCTTAACTCAGAGATCTGCCTGCCTCTGCCTCGTGAGTAGTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR TCA 72 bp | ATCCCAGCACTTGGGAGGCAGAGACAGTCAGATTTCTaGGTTCGAGGCAGCCTGGTCTACAGAGTGAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IPALGRQRQSDF*VRGSLVYRVSS Trigger: GGAACTCACTCTGTAGACCAGGCTGCCTCGAACTCAGAAATCTGACTGTCTCTGCCTCCCAAGTGCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR GCA 72 bp | AAACCCATTCCACGAAGCGGATCACGGACAAGGAAGTaGATGTGGTGCCCAGTGGATGGTCACTCATTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KPIPRSGSRTRK*MWCPVDGHSLA Trigger: AGCCAATGAGTGACCATCCACTGGGCACCACATGCACTTCCTTGTCCGTGATCCGCTTCGTGGAATGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | GTGGCTCAGTTCCCTCTCAAGGTGGTGCCTGGATCCTaGCTTCTCAGTCGCAGTAACACAAATGGGATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VAQFPLKVVPGS*LLSRSNTNGIP Trigger: AGGAATCCCATTTGTGTTACTGCGACTGAGAAGGCAGGATCCAGGCACCACCTTGAGAGGGAACTGAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | TTCCAGGACAGCCAGGGCTACACAGAGACAGCCATGTaGAGTCTCCAAATGCAAAAGGTCTGTGTCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FQDSQGYTETAM*SLQMQKVCVPA Trigger: AGCAGGGACACAGACCTTTTGCATTTGGAGACTGCACATGGCTGTCTCTGTGTAGCCCTGGCTGTCCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR CCA 72 bp | AACAGCCTCGTCAAAGCCCACATCTGGTGGGCTTCTTaGAAGGTGGGTGTGTCAATTCACCAGAACAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSLVKAHIWWAS*KVGVSIHQNSL Trigger: CAGGCTGTTCTGGTGAATTGACACACCCACCTTCCAAGAAGCCCACCAGATGTGGGCTTTGACGAGGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | TCTGGAGGAAACAGCCTCGTCAAAGCCCACATCTGGTaGGCTTCTTGGAAGGTGGGTGTGTCAATTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGGNSLVKAHIW*ASWKVGVSIHQ Trigger: CTGGTGAATTGACACACCCACCTTCCAAGAAGCCCACCAGATGTGGGCTTTGACGAGGCTGTTTCCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | CTTTTGTCTTGCTGGAAGAATGTAGCTATGGGAGCTTaGCTGCTGGTGCTGCAGTCTTCAGGATCTGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSCWKNVAMGA*LLVLQSSGSVA Trigger: GGCCACAGATCCTGAAGACTGCAGCACCAGCAGGCAAGCTCCCATAGCTACATTCTTCCAGCAAGACAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | CTAGCATGTGTGAGGGCCTGGGTGTCACCTCAGCACTaGAAGCATGACACTACACAGTATAATGCCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LACVRAWVSPQH*KHDTTQYNASC Trigger: ACAGGAGGCATTATACTGTGTAGTGTCATGCTTGCAGTGCTGAGGTGACACCCAGGCCCTCACACATGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR GCA 72 bp | TGTAGGTGCCAGGAAGCCATCTCAAGTGCTCTTAACTaGCGAGCCTTCTCTCCAGCCCCTTTGTGTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CRCQEAISSALN*RAFSPAPLCCF Trigger: AAAACAACACAAAGGGGCTGGAGAGAAGGCTCGGCAGTTAAGAGCACTTGAGATGGCTTCCTGGCACCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | TTGAACCAGGGCTCTTTTCTAAGGTTAAGCCCTGTTTaGCAAGTGTCAGATTCCCACAGGACCTGGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LNQGSFLRLSPV*QVSDSHRTWLH Trigger: GTGGAGCCAGGTCCTGTGGGAATCTGACACTTGCCAAACAGGGCTTAACCTTAGAAAAGAGCCCTGGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR TCA 72 bp | AGAGAAAAGCAAGTCTTGGGCGCACTGACCCTGTGCTaGATCCATGCCAATGACAGGCAACACTGTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: REKQVLGALTLC*IHANDRQHCVF Trigger: AAACACACAGTGTTGCCTGTCATTGGCATGGATTCAGCACAGGGTCAGTGCGCCCAAGACTTGCTTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR GCA 72 bp | TGCGTGTGCAATGAGGACTATTTAAATAAGGCGATGTaGTCACACCCTGGGTTTCCTGCCGCTATCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CVCNEDYLNKAM*SHPGFPAAIIS Trigger: GCTGATGATAGCGGCAGGAAACCCAGGGTGTGAGCACATCGCCTTATTTAAATAGTCCTCATTGCACACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | CTCAGTCGCAGTAACACAAATGGGATTCCTCTCTACTaGAAACTCGTCTGGAGGAAACAGCCTCGTCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSRSNTNGIPLY*KLVWRKQPRQS Trigger: GCTTTGACGAGGCTGTTTCCTCCAGACGAGTTTGCAGTAGAGAGGAATCCCATTTGTGTTACTGCGACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | GCTACAGGCACGTTTATTCTTGATGTAATCTGGTCCTaGCATCCAGGGCAGGGTTTTTCCCTGTGCACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ATGTFILDVIWS*HPGQGFSLCTV Trigger: TACAGTGCACAGGGAAAAACCCTGCCCTGGATGCCAGGACCAGATTACATCAAGAATAAACGTGCCTGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | AGCCCTGTTTGGCAAGTGTCAGATTCCCACAGGACCTaGCTCCACTTGAATAGCTTCCCACCTTTATGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPVWQVSDSHRT*LHLNSFPPLCS Trigger: ACTACATAAAGGTGGGAAGCTATTCAAGTGGAGCCAGGTCCTGTGGGAATCTGACACTTGCCAAACAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CCA 72 bp | ATCACGGACAAGGAAGTGCATGTGGTGCCCAGTGGATaGTCACTCATTGGCTCTTACAATAGTGGGCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: ITDKEVHVVPSG*SLIGSYNSGQI Trigger: AATTTGCCCACTATTGTAAGAGCCAATGAGTGACCATCCACTGGGCACCACATGCACTTCCTTGTCCGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGTAATCTGGTCCTGGCATCCAGGGCAGGGTTTTTCCCTGTGCACTGTACTGATGTTAAACGACATCTaGCAGGAATCTTTTCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: DVIWSWHPGQGFSLCTVLMLNDI*QESFLS Trigger: GGAAAGAAAAGATTCCTGCAAGATGTCGTTTAACAT...CAGTACAGTGCACAGGGAAAAACCCTGCCCTGGATGCCAGGACCAGATTACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR GCA 72 bp | CATGTGCAGTCTCCAAATGCAAAAGGTCTGTGTCCCTaGTTACCTAACCCTGCAAAACAGTCCCATTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HVQSPNAKGLCP*LPNPAKQSHFQ Trigger: TTGGAAATGGGACTGTTTTGCAGGGTTAGGTAAGCAGGGACACAGACCTTTTGCATTTGGAGACTGCACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTATAAGTATCTTTGTGGTGATGGAGATGACACCCCGGCCCTCTGCATGCTGGTGCTGTAAGATCACATaGCTGTATGCAGTGAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: IISIFVVMEMTPRPSACWCCKIT*LYAVRN Trigger: ATTTCTCACTGCATACAGCAATGTGATCTTACAGCA...CCAGCATGCAGAGGGCCGGGGTGTCATCTCCATCACCACAAAGATACTTATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTAATGAGATCTaGTACCCTCTTCTGGTGTGTCTGAAGACAGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTICNEI*YPLLVCLKTAN Trigger: ATTAGCTGTCTTCAGACACACCAGAAGAGGGTATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR TCA 72 bp | TGTGTGGCACCTCACTGTTTACATTTCTACACACATTaGCAGACTCATGGGATGAACTATTATCAGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CVAPHCLHFYTH*QTHGMNYYQPG Trigger: TCCAGGCTGATAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGTGCCACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGTGACCAGAGGGTTATGTGTGTGTGTGAGTATTATAATTCCAGCTGTGAGGTAACATTTCTTAGGTaGAAAGCTTCTAGGTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VSDQRVMCVCEYYNSSCEVTFLR*KASRSP Trigger: AGGTGACCTAGAAGCTTTCAACCTAAGAAATGTTAC...CTCACAGCTGGAATTATAATACTCACACACACACATAACCCTCTGGTCACTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR CCA 72 bp | GACACTACACAGTATAATGCCTCCTGTACTAGTGTGTaGGAAATTCTAATTTCACCACAAAAGTCCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: DTTQYNASCTSV*EILISPQKSLS Trigger: ACTTAGGGACTTTTGTGGTGAAATTAGAATTTCCCACACACTAGTACAGGAGGCATTATACTGTGTAGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR GCA 72 bp | TTTAAAGTATGTTTCTCTCAAGTTATACACAATGACTaGAGACAAAATGGTCAAACAGTGTACAGGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FKVCFSQVIHND*RQNGQTVYRLG Trigger: TCCCAGCCTGTACACTGTTTGACCATTTTGTCTGCAGTCATTGTGTATAACTTGAGAGAAACATACTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| 3UTR CCA 72 bp | TCACTGTTTACATTTCTACACACATTGACAGACTCATaGGATGAACTATTATCAGCCTGGAATCAGCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLFTFLHTLTDS*DELLSAWNQHK Trigger: TTTATGCTGATTCCAGGCTGATAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR GCA 72 bp | AAACGGTTTAATTATATTTTTGCAGGTCTCATAATGTaGGTGTGCAATGAGGACTATTTAAATAAGGCGATG | + |
|
Preference number: 3 (lower is better) Translates to: KRFNYIFAGLIM*VCNEDYLNKAM Trigger: CATCGCCTTATTTAAATAGTCCTCATTGCACACGCACATTATGAGACCTGCAAAAATATAATTAAACCGTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCTCAGTTCCCTCTCAAGGTGGTGCCTGGATCCTGCCTTCTCAGTCGCAGTCTCTGTACTCCCCGTaGCCTTTGGAAAGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSVPSQGGAWILPSQSQSLYSP*PLESHS Trigger: AGAGTGGCTTTCCAAAGGGCACGGGGAGTACAGAGA...CTGCGACTGAGAAGGCAGGATCCAGGCACCACCTTGAGAGGGAACTGAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTGTGGTGGTCTCCCAAGTGCACTGGGAGTGTGGGAGCAACCGAGACATCCAGCCTCTTTTCTTTaGGCAGCTCCAGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCCGGLPSALGVWEQPRHPASFL*AAPVHL Trigger: AAGATGAACTGGAGCTGCTCAAAGAAAAGAGGCTGG...ATGTCTCGGTTGCTCCCACACTCCCAGTGCACTTGGGAGACCACCACAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR TCA 90 bp | GATGTAATCTGGTCCTGGCATCCAGGGCAGGGTTTTTCCCTGTGCACTGTACTGGTTCTCCAGGACTTCTaGGAACATGTCGACGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: DVIWSWHPGQGFSLCTVLVLQDF*EHVDGS Trigger: GGATCCGTCGACATGTTCTCAGAAGTCCTGGAGAAC...CAGTACAGTGCACAGGGAAAAACCCTGCCCTGGATGCCAGGACCAGATTACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CCA 90 bp | ATTATAAGTATCTTTGTGGTGATGGAGATGACACCCCGGCCCTCTGCATGCTGGGCGGCCTGGAGGAACTaGTTCTCCAGGACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IISIFVVMEMTPRPSACWAAWRN*FSRTSE Trigger: CTCAGAAGTCCTGGAGAACCAGTTCCTCCAGGCCGC...CCAGCATGCAGAGGGCCGGGGTGTCATCTCCATCACCACAAAGATACTTATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR CAA 72 bp | AAACAGCCTCGTCAAAGCCCACATCTGGTGGGCTTCTaGGAAGGTGGGTGTGTCAATTCACCAGAACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQPRQSPHLVGF*EGGCVNSPEQP Trigger: AGGCTGTTCTGGTGAATTGACACACCCACCTTCCAAGAAGCCCACCAGATGTGGGCTTTGACGAGGCTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CAA 72 bp | GCTTTTGTCTTGCTGGAAGAATGTAGCTATGGGAGCTaGCCTGCTGGTGCTGCAGTCTTCAGGATCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFVLLEECSYGS*PAGAAVFRICG Trigger: GCCACAGATCCTGAAGACTGCAGCACCAGCAGGCAAGCTCCCATAGCTACATTCTTCCAGCAAGACAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATAACCATCTCCTAGGTTGTCTGTTGGATGGCTGTTCTCCATTCTCAGACGCGGCCTGGAGGAACTaGTTCTCCAGGACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHNHLLGCLLDGCSPFSDAAWRN*FSRTSE Trigger: CTCAGAAGTCCTGGAGAACCAGTTCCTCCAGGCCGC...GTCTGAGAATGGAGAACAGCCATCCAACAGACAACCTAGGAGATGGTTATGGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CCA 90 bp | GATGTAATCTGGTCCTGGCATCCAGGGCAGGGTTTTTCCCTGTGCACTGTACTGACTCCCCGTGCCCTTTaGAAAGCCACTCTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DVIWSWHPGQGFSLCTVLTPRAL*KATLVS Trigger: AGAAACAAGAGTGGCTTTCCAAAGGGCACGGGGAGT...CAGTACAGTGCACAGGGAAAAACCCTGCCCTGGATGCCAGGACCAGATTACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CAA 72 bp | TGGCAAGTGTCAGATTCCCACAGGACCTGGCTCCACTaGAATAGCTTCCCACCTTTATGTAGTAGCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WQVSDSHRTWLH*NSFPPLCSSVL Trigger: GAGGACGCTACTACATAAAGGTGGGAAGCTATTCAAGTGGAGCCAGGTCCTGTGGGAATCTGACACTTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CAA 72 bp | GTTGAACCAGGGCTCTTTTCTAAGGTTAAGCCCTGTTaGGCAAGTGTCAGATTCCCACAGGACCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEPGLFSKVKPC*ASVRFPQDLAP Trigger: TGGAGCCAGGTCCTGTGGGAATCTGACACTTGCCAAACAGGGCTTAACCTTAGAAAAGAGCCCTGGTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CCA 90 bp | ATTATAAGTATCTTTGTGGTGATGGAGATGACACCCCGGCCCTCTGCATGCTGGACTCCCCGTGCCCTTTaGAAAGCCACTCTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IISIFVVMEMTPRPSACWTPRAL*KATLVS Trigger: AGAAACAAGAGTGGCTTTCCAAAGGGCACGGGGAGT...CCAGCATGCAGAGGGCCGGGGTGTCATCTCCATCACCACAAAGATACTTATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR CAA 72 bp | CCTCCCACTCTCCATAACCATCTCCTAGGTTGTCTGTaGGATGGCTGTTCTCCATTCTCAGACTCCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTLHNHLLGCL*DGCSPFSDSKC Trigger: ACACTTGGAGTCTGAGAATGGAGAACAGCCATCCAACAGACAACCTAGGAGATGGTTATGGAGAGTGGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CAA 72 bp | GTGCACTGGGAGTGTGGGAGCAACCGAGACATCACATaGTCTCTGCTTTTGTCTTGCTGGAAGAATGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHWECGSNRDIT*SLLLSCWKNVA Trigger: AGCTACATTCTTCCAGCAAGACAAAAGCAGAGACAATGTGATGTCTCGGTTGCTCCCACACTCCCAGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACTTGGGAGGCAGAGACAGTCAGATTTCTGAGTTCGAGGCAGCCTGGTCTCTAGTATTTTACACCTaGATGTGGTGTCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHLGGRDSQISEFEAAWSLVFYT*MWCLCR Trigger: TCTACAGAGACACCACATTCAGGTGTAAAATACTAG...AGACCAGGCTGCCTCGAACTCAGAAATCTGACTGTCTCTGCCTCCCAAGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| CDS-3UTR GCA 90 bp | GAATGTAGCTATGGGAGCTTGCCTGCTGGTGCTGCAGTCTTCAGGATCTGTGGCCATAATCTTGCGTCTTaGCATCTCTTAAGAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ECSYGSLPAGAAVFRICGHNLAS*HLLREL Trigger: TAGCTCTCTTAAGAGATGGCAAGACGCAAGATTATG...GCCACAGATCCTGAAGACTGCAGCACCAGCAGGCAAGCTCCCATAGCTACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CAA 72 bp | GAGCAACCGAGACATCACATTGTCTCTGCTTTTGTCTaGCTGGAAGAATGTAGCTATGGGAGCTTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQPRHHIVSAFV*LEECSYGSLPA Trigger: AGCAGGCAAGCTCCCATAGCTACATTCTTCCAGCAAGACAAAAGCAGAGACAATGTGATGTCTCGGTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR TCA 90 bp | TGGGATTCCTCTCTACTGCAAACTCGTCTGGAGGAAACAGCCTCGTCAAAGCCCAATTTCTTTTGGCTCTaGAATGGTGGCTCCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WDSSLLQTRLEETASSKPNFFWL*NGGSIK Trigger: TTTAATGGAGCCACCATTTCAGAGCCAAAAGAAATT...GGGCTTTGACGAGGCTGTTTCCTCCAGACGAGTTTGCAGTAGAGAGGAATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTTTGTCTTGCTGGAAGAATGTAGCTATGGGAGCTTGCCTGCTGGTGCTGAACTTGGTTTCAAGATaGTTTTTGGCCAGAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSCWKNVAMGACLLVLNLVSR*FLARIA Trigger: GGCAATTCTGGCCAAAAAGCATCTTGAAACCAAGTT...CAGCACCAGCAGGCAAGCTCCCATAGCTACATTCTTCCAGCAAGACAAAAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCCACCAGTGGGCCCAGTCCCCAAGTTTTGTGGTAAGTGCCTTTCTCCATTTCAAGATGCTTTTTaGCCAGAATTGCCAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPPVGPVPKFCGKCLSPFQDAF*PELPNV Trigger: GACATTTGGCAATTCTGGCCAAAAAGCATCTTGAAA...TGGAGAAAGGCACTTACCACAAAACTTGGGGACTGGGCCCACTGGTGGAAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR TCA 90 bp | CATCACATTGTCTCTGCTTTTGTCTTGCTGGAAGAATGTAGCTATGGGAGCTTGATTTCAGAGTCCAAGTaGTTCTCCACCAGCTTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HHIVSAFVLLEECSYGSLISESK*FSTSLA Trigger: CGCTAAGCTGGTGGAGAATCACTTGGACTCTGAAAT...CAAGCTCCCATAGCTACATTCTTCCAGCAAGACAAAAGCAGAGACAATGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAAGTTATACACAATGACTGCAGACAAAATGGTCAAACAGTGTACAGGCTCTCTGTACTCCCCGTaGCCTTTGGAAAGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLKLYTMTADKMVKQCTGSLYSP*PLESHS Trigger: AGAGTGGCTTTCCAAAGGGCACGGGGAGTACAGAGA...GCCTGTACACTGTTTGACCATTTTGTCTGCAGTCATTGTGTATAACTTGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGCTCTGCAGCCTATGGGCTTTCATTCTTGGACTGGATCCCCAGAAGTGGCTCAGCTTCAAAAACTTaGTTTCAAGATGCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSAAYGLSFLDWIPRSGSASKT*FQDAFW Trigger: CCAAAAAGCATCTTGAAACCAAGTTTTTGAAGCTGA...GCCACTTCTGGGGATCCAGTCCAAGAATGAAAGCCCATAGGCTGCAGAGCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGACCAGAGGGTTATGTGTGTGTGTGAGTATTATAATTCCAGCTGTGAGATTTCAGAGTCCAAGTaGTTCTCCACCAGCTTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSDQRVMCVCEYYNSSCEISESK*FSTSLA Trigger: CGCTAAGCTGGTGGAGAATCACTTGGACTCTGAAAT...CTCACAGCTGGAATTATAATACTCACACACACACATAACCCTCTGGTCACTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| CDS-3UTR CCA 90 bp | ATTCAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGGCGGCCTGGAGGAACTaGTTCTCCAGGACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPGNLKYVSLKLYTMAAWRN*FSRTSE Trigger: CTCAGAAGTCCTGGAGAACCAGTTCCTCCAGGCCGC...CATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR TCA 90 bp | GGGCCGAAATCAGTGGAATTTAGGAATTTAGAAAACACACTTAACTCTGAAGTAGTTCTCCAGGACTTCTaGGAACATGTCGACGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GPKSVEFRNLENTLNSEVVLQDF*EHVDGS Trigger: GGATCCGTCGACATGTTCTCAGAAGTCCTGGAGAAC...TACTTCAGAGTTAAGTGTGTTTTCTAAATTCCTAAATTCCACTGATTTCGGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR TCA 90 bp | TTAGAAAACACACTTAACTCTGAAGTAGACAGACAGACAGACAGACAGACGGAACCAGCCTCTTTTCTTTaGGCAGCTCCAGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LENTLNSEVDRQTDRQTEPASFL*AAPVHL Trigger: AAGATGAACTGGAGCTGCTCAAAGAAAAGAGGCTGG...TTCCGTCTGTCTGTCTGTCTGTCTGTCTACTTCAGAGTTAAGTGTGTTTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR GCA 90 bp | GTCAATGGGCCGAAATCAGTGGAATTTAGGAATTTAGAAAACACACTTAACTCTTCTCTGTACTCCCCGTaGCCTTTGGAAAGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNGPKSVEFRNLENTLNSSLYSP*PLESHS Trigger: AGAGTGGCTTTCCAAAGGGCACGGGGAGTACAGAGA...AGAGTTAAGTGTGTTTTCTAAATTCCTAAATTCCACTGATTTCGGCCCATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR TCA 90 bp | ATTCAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGGTTCTCCAGGACTTCTaGGAACATGTCGACGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPGNLKYVSLKLYTMVLQDF*EHVDGS Trigger: GGATCCGTCGACATGTTCTCAGAAGTCCTGGAGAAC...CATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR TCA 90 bp | CAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGACTCCAGCCTCTTTTCTTTaGGCAGCTCCAGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLPGNLKYVSLKLYTMTPASFL*AAPVHL Trigger: AAGATGAACTGGAGCTGCTCAAAGAAAAGAGGCTGG...AGTCATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR TCA 90 bp | TTAGAAAACACACTTAACTCTGAAGTAGACAGACAGACAGACAGACAGACGGAACTAGTATTTTACACCTaGATGTGGTGTCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LENTLNSEVDRQTDRQTELVFYT*MWCLCR Trigger: TCTACAGAGACACCACATTCAGGTGTAAAATACTAG...TTCCGTCTGTCTGTCTGTCTGTCTGTCTACTTCAGAGTTAAGTGTGTTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTGTGTGGCACCTCACTGTTTACATTTCTACACACATTGACAGACTCATCAGCTTCAAAAACTTaGTTTCAAGATGCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLCGTSLFTFLHTLTDSSASKT*FQDAFW Trigger: CCAAAAAGCATCTTGAAACCAAGTTTTTGAAGCTGA...TGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGTGCCACACAGGAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| 3UTR CAA 72 bp | TTTGTATTTCCTGTATTGTGTATGTTAAACGACATCTaGCAGGAATCTTTTCTTTCCTTCCACCAGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FVFPVLCMLNDI*QESFLSFHQWA Trigger: GGCCCACTGGTGGAAGGAAAGAAAAGATTCCTGCAAGATGTCGTTTAACATACACAATACAGGAAATACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| 3UTR CAA 72 bp | GGGCTTCCAAAATTCGTTTCAGTAACATTTCTTAGGTaGAAAGCTTCTAGGTCACCTCTAAGCCTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GLPKFVSVTFLR*KASRSPLSLSL Trigger: TAAAGACAGGCTTAGAGGTGACCTAGAAGCTTTCAACCTAAGAAATGTTACTGAAACGAATTTTGGAAGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| CDS-3UTR TCA 90 bp | GTCAATGGGCCGAAATCAGTGGAATTTAGGAATTTAGAAAACACACTTAACTCTCTAGTATTTTACACCTaGATGTGGTGTCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNGPKSVEFRNLENTLNSLVFYT*MWCLCR Trigger: TCTACAGAGACACCACATTCAGGTGTAAAATACTAG...AGAGTTAAGTGTGTTTTCTAAATTCCTAAATTCCACTGATTTCGGCCCATTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR GCA 90 bp | ACCTCACTGTTTACATTTCTACACACATTGACAGACTCATGGGATGAACTATTAAACTTGGTTTCAAGATaGTTTTTGGCCAGAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLFTFLHTLTDSWDELLNLVSR*FLARIA Trigger: GGCAATTCTGGCCAAAAAGCATCTTGAAACCAAGTT...TAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| CDS-3UTR GCA 90 bp | ACCTCACTGTTTACATTTCTACACACATTGACAGACTCATGGGATGAACTATTACATAATCTTGCGTCTTaGCATCTCTTAAGAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLFTFLHTLTDSWDELLHNLAS*HLLREL Trigger: TAGCTCTCTTAAGAGATGGCAAGACGCAAGATTATG...TAATAGTTCATCCCATGAGTCTGTCAATGTGTGTAGAAATGTAAACAGTGAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| CDS-3UTR GCA 90 bp | CAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGACTCATAATCTTGCGTCTTaGCATCTCTTAAGAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QTLPGNLKYVSLKLYTMTHNLAS*HLLREL Trigger: TAGCTCTCTTAAGAGATGGCAAGACGCAAGATTATG...AGTCATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR TCA 90 bp | CAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGACTAATTTCTTTTGGCTCTaGAATGGTGGCTCCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTLPGNLKYVSLKLYTMTNFFWL*NGGSIK Trigger: TTTAATGGAGCCACCATTTCAGAGCCAAAAGAAATT...AGTCATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162031.8 ENSMUST00000195247.6 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGGCCGAAATCAGTGGAATTTAGGAATTTAGAAAACACACTTAACTCTTTTCAAGATGCTTTTTaGCCAGAATTGCCAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VNGPKSVEFRNLENTLNSFQDAF*PELPNV Trigger: GACATTTGGCAATTCTGGCCAAAAAGCATCTTGAAA...AGAGTTAAGTGTGTTTTCTAAATTCCTAAATTCCACTGATTTCGGCCCATTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CCA 90 bp | ATTCAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGTTTCAAGATGCTTTTTaGCCAGAATTGCCAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPGNLKYVSLKLYTMFQDAF*PELPNV Trigger: GACATTTGGCAATTCTGGCCAAAAAGCATCTTGAAA...CATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGGCCGAAATCAGTGGAATTTAGGAATTTAGAAAACACACTTAACTCTTCAGCTTCAAAAACTTaGTTTCAAGATGCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNGPKSVEFRNLENTLNSSASKT*FQDAFW Trigger: CCAAAAAGCATCTTGAAACCAAGTTTTTGAAGCTGA...AGAGTTAAGTGTGTTTTCTAAATTCCTAAATTCCACTGATTTCGGCCCATTGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CAA 90 bp | GTGGATGGCTGTGTGCCACCATGTAGGTGCCAGGAAGCCATCTCAAGTGCTCTTAGCGTGGGGATGACCTaGATCCGCAGTCTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VDGCVPPCRCQEAISSALSVGMT*IRSLSQ Trigger: CTGTGAGAGACTGCGGATCAAGGTCATCCCCACGCT...AAGAGCACTTGAGATGGCTTCCTGGCACCTACATGGTGGCACACAGCCATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CAA 90 bp | TGGGATTCCTCTCTACTGCAAACTCGTCTGGAGGAAACAGCCTCGTCAAAGCCCTACTCCCCGTGCCCTTaGGAAAGCCACTCTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WDSSLLQTRLEETASSKPYSPCP*ESHSCF Trigger: GAAACAAGAGTGGCTTTCCAAAGGGCACGGGGAGTA...GGGCTTTGACGAGGCTGTTTCCTCCAGACGAGTTTGCAGTAGAGAGGAATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACTACTCCCCGTGCCCTTaGGAAAGCCACTCTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALPEVLSSNPSNHMVAHNYSPCP*ESHSCF Trigger: GAAACAAGAGTGGCTTTCCAAAGGGCACGGGGAGTA...GTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| CDS-3UTR CAA 90 bp | TCTGGTGGGCTTCTTGGAAGGTGGGTGTGTCAATTCACCAGAACAGCCTGGCTTGCCAGCCTCTTTTCTTaGAGCAGCTCCAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGLLGRWVCQFTRTAWLASLFS*SSSSSS Trigger: AGATGAACTGGAGCTGCTCAAAGAAAAGAGGCTGGC...AAGCCAGGCTGTTCTGGTGAATTGACACACCCACCTTCCAAGAAGCCCACCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGTATGCAGTGAGAAATTTCTTTCCCTAAGCCATCCACATTTTAGCCAGAGCGTGGGGATGACCTaGATCCGCAGTCTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: IAVCSEKFLSLSHPHFSQSVGMT*IRSLSQ Trigger: CTGTGAGAGACTGCGGATCAAGGTCATCCCCACGCT...CTGGCTAAAATGTGGATGGCTTAGGGAAAGAAATTTCTCACTGCATACAGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193832.6 |
||
| CDS-3UTR CAA 90 bp | GGGCCGAAATCAGTGGAATTTAGGAATTTAGAAAACACACTTAACTCTGAAGTAAGCGTGGGGATGACCTaGATCCGCAGTCTCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GPKSVEFRNLENTLNSEVSVGMT*IRSLSQ Trigger: CTGTGAGAGACTGCGGATCAAGGTCATCCCCACGCT...TACTTCAGAGTTAAGTGTGTTTTCTAAATTCCTAAATTCCACTGATTTCGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CAA 90 bp | TCTCTCAAGTTATACACAATGACTGCAGACAAAATGGTCAAACAGTGTACAGGCGCCAGCCTCTTTTCTTaGAGCAGCTCCAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLKLYTMTADKMVKQCTGASLFS*SSSSSS Trigger: AGATGAACTGGAGCTGCTCAAAGAAAAGAGGCTGGC...GCCTGTACACTGTTTGACCATTTTGTCTGCAGTCATTGTGTATAACTTGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CAA 90 bp | TTAGAAAACACACTTAACTCTGAAGTAGACAGACAGACAGACAGACAGACGGAATGTCCCAAATTTCTTTaGGCTCTGAAATGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LENTLNSEVDRQTDRQTECPKFL*ALKWWL Trigger: GAGCCACCATTTCAGAGCCAAAAGAAATTTGGGACA...TTCCGTCTGTCTGTCTGTCTGTCTGTCTACTTCAGAGTTAAGTGTGTTTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162031.8 ENSMUST00000195247.6 |
||
| CDS-3UTR CAA 90 bp | ATTCAGACCCTCCCAGGTAATTTAAAGTATGTTTCTCTCAAGTTATACACAATGGCCAGCCTCTTTTCTTaGAGCAGCTCCAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: IQTLPGNLKYVSLKLYTMASLFS*SSSSSS Trigger: AGATGAACTGGAGCTGCTCAAAGAAAAGAGGCTGGC...CATTGTGTATAACTTGAGAGAAACATACTTTAAATTACCTGGGAGGGTCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162031.8 ENSMUST00000193832.6 ENSMUST00000195247.6 |
||
| CDS-3UTR CAA 90 bp | GTAGTTGATGCTATACTCTTTTCTTACCAAGGCTTATTTATTTCTGGGCATCAGTGTCCCAAATTTCTTTaGGCTCTGAAATGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VVDAILFSYQGLFISGHQCPKFL*ALKWWL Trigger: GAGCCACCATTTCAGAGCCAAAAGAAATTTGGGACA...CTGATGCCCAGAAATAAATAAGCCTTGGTAAGAAAAGAGTATAGCATCAACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162031.8 |
||
| CDS TCA 90 bp | TTCTTTTCCAGCTTTGTAAAGTTTGTCCCAAATTTCTTTTGGCTCTaGAATGGTGGCTCCATTAAATTTCCACTGAATGTGGTGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FFSSFVKFVPNFFWL*NGGSIKFPLNVVSL Trigger: CAGAGACACCACATTCAGTGGAAATTTAATGGAGCCACCATTTCAGAGCCAAAAGAAATTTGGGACAAACTTTACAAAGCTGGAAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192960.6 |
||