Pregenerated sensors for TXNDC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038991Ensembl transcript IDs: ENSMUST00000035988.16, ENSMUST00000160653.2, ENSMUST00000162075.8
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTaGGGACCCACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: AAETPWSLDLGKPIG*GPTLWCIPYPPFLQ Trigger: CTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTGGGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | GTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCCCTGGTCCTTaGACCTGGGAAAGCCTATCGGGTGAGGACCCACCTTGTGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: VSRKAREELQRLPGP*TWESLSGEDPPCGA Trigger: TGCACCACAAGGTGGGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | CAGGCTGGCGGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTaGTCTGGTTTCAAGTCTCCTTGCTACACGTCTTGTGCCAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: QAGGAPLLLMFWKQT*SGFKSPCYTSCARC Trigger: GCACCTGGCACAAGACGTGTAGCAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCGCCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR GCA 90 bp | AGCCATGCGATATCCAACCTTGGGCTTCCTAGGCAAGGGCAGCCCTaGCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: SHAISNLGLPRQGQP*RLQSLVWRSDESHC Trigger: GCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCCAAGGTTGGATATCGCATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | TCCTTGCTACACGTCTTGTGCCAGGTGCTGATTTCACCCCGCTCGTaGGAGGTAGGTGAAGGGCCTGGGCACAAACACAGTGGTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SLLHVLCQVLISPRS*EVGEGPGHKHSGSE Trigger: CTCAGAACCACTGTGTTTGTGCCCAGGCCCTTCACCTACCTCCCACGAGCGGGGTGAAATCAGCACCTGGCACAAGACGTGTAGCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR GCA 90 bp | CAGTGCCGCAGGCCTCCTTCCCAAAACTCAGGCAATGCAACAAATTaGTCCTGCGAGATGATGTCCTTACATCCCTGGGAGCCAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: QCRRPPSQNSGNATN*SCEMMSLHPWEPAE Trigger: CTCTGCTGGCTCCCAGGGATGTAAGGACATCATCTCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTTGGGAAGGAGGCCTGCGGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR GCA 90 bp | CGATATCCAACCTTGGGCTTCCTAGGCAAGGGCAGCCCTGCCGACTaGAGTCTTTGGTCTGGAGGTCAGATGAATCCCACTGCTCAATCA | + |
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Preference number: 1 (lower is better) Translates to: RYPTLGFLGKGSPAD*SLWSGGQMNPTAQS Trigger: TGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCCAAGGTTGGATATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | GGGCTTCCTAGGCAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTaGAGGTCAGATGAATCCCACTGCTCAATCATTAGAGAGATGGTC | + |
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Preference number: 1 (lower is better) Translates to: GLPRQGQPCRLQSLV*RSDESHCSIIREMV Trigger: GACCATCTCTCTAATGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | ACCTTGGGCTTCCTAGGCAAGGGCAGCCCTGCCGACTGCAGTCTTTaGTCTGGAGGTCAGATGAATCCCACTGCTCAATCATTAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TLGFLGKGSPADCSL*SGGQMNPTAQSLER Trigger: TCTCTCTAATGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | GATCTCCAGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATaGACCGACACCTTACTAAGTCAACAGTGCCGCAGGCCTCCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: DLQGSVGFCFEICTL*TDTLLSQQCRRPPS Trigger: GGAAGGAGGCCTGCGGCACTGTTGACTTAGTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCTGGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR TCA 90 bp | CTCCTTCCCAAAACTCAGGCAATGCAACAAATTGCTCCTGCGAGATaGTGTCCTTACATCCCTGGGAGCCAGCAGAGTTCAGCAATTTGG | + |
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Preference number: 1 (lower is better) Translates to: LLPKTQAMQQIAPAR*CPYIPGSQQSSAIW Trigger: CCAAATTGCTGAACTCTGCTGGCTCCCAGGGATGTAAGGACATCATCTCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTTGGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | GGCAATGCAACAAATTGCTCCTGCGAGATGATGTCCTTACATCCCTaGGAGCCAGCAGAGTTCAGCAATTTGGCTTTCCTTGACTGTATT | + |
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Preference number: 1 (lower is better) Translates to: GNATNCSCEMMSLHP*EPAEFSNLAFLDCI Trigger: AATACAGTCAAGGAAAGCCAAATTGCTGAACTCTGCTGGCTCCCAGGGATGTAAGGACATCATCTCGCAGGAGCAATTTGTTGCATTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 90 bp | CCTATGCGAAGCAGACAAGAGGATCCTTTGAACAGCATGAGTATTTaGGGCACACATCAGAAGTACCATTTGTTATGGCTTACCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PMRSRQEDPLNSMSI*GTHQKYHLLWLTSL Trigger: GAGAGAGGTAAGCCATAACAAATGGTACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCTGCTTCGCATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR TCA 90 bp | TCACCCCGCTCGTGGGAGGTAGGTGAAGGGCCTGGGCACAAACACAGTGGTTCTACCCAGCAGTGGCTATaGAGGGATCTCCAGGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SPRSWEVGEGPGHKHSGSTQQWL*RDLQGS Trigger: AGAGCCCTGGAGATCCCTTCATAGCCACTGCTGGGT...AGAACCACTGTGTTTGTGCCCAGGCCCTTCACCTACCTCCCACGAGCGGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACCCTGGTCCTTGGACCTaGGAAAGCCTATCGGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QGQPCRLQSLVWRSDESHPGPWT*ESLSGE Trigger: CTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGG...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCATGTCCTTACATCCCTaGGAGCCAGCAGAGTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SCRDSLVLGPGKAYRVRTMSLHP*EPAEFS Trigger: GCTGAACTCTGCTGGCTCCCAGGGATGTAAGGACAT...GGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCGTCCGTAGTGTGTGGTaGCTCAGAGAGCACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: RGASAPDVLEADVVWFQVVRSVW*LREHTG Trigger: TCCTGTGTGCTCTCTGAGCCACCACACACTACGGAC...GACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACAAGGTCCGTAGTGTGTaGTGGCTCAGAGAGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: QGQPCRLQSLVWRSDESHKVRSV*WLREHT Trigger: TGTGTGCTCTCTGAGCCACCACACACTACGGACCTT...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CAA 90 bp | ACAGTGCCGCAGGCCTCCTTCCCAAAACTCAGGCAATGCAACAAATaGCTCCTGCGAGATGATGTCCTTACATCCCTGGGAGCCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TVPQASFPKLRQCNK*LLRDDVLTSLGASR Trigger: TCTGCTGGCTCCCAGGGATGTAAGGACATCATCTCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTTGGGAAGGAGGCCTGCGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CAA 90 bp | AACCTTGGGCTTCCTAGGCAAGGGCAGCCCTGCCGACTGCAGTCTTaGGTCTGGAGGTCAGATGAATCCCACTGCTCAATCATTAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: NLGLPRQGQPCRLQS*VWRSDESHCSIIRE Trigger: CTCTCTAATGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCCAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACAGGGACTGTGAGCCATaGTTAGAGAAACTTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: ELQRLPGPWTWESLSGEDRDCEP*LEKLKV Trigger: GACCTTAAGTTTCTCTAATCATGGCTCACAGTCCCT...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCCCAAAACTCAGGCAATaGAACAAATTGCTCCTGCGA | + |
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Preference number: 2 (lower is better) Translates to: SCRDSLVLGPGKAYRVRTPKLRQ*NKLLLR Trigger: TCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTTGG...GGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCCAAAACTCAGGCAATaGAACAAATTGCTCCTGCGA | + |
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Preference number: 2 (lower is better) Translates to: ELQRLPGPWTWESLSGEDPKLRQ*NKLLLR Trigger: TCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTTGG...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACTGCTCAATCAGTCCGTAGTGTGTGGTaGCTCAGAGAGCACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: PADCSLWSGGQMNPTAQSVRSVW*LREHTG Trigger: TCCTGTGTGCTCTCTGAGCCACCACACACTACGGAC...TGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR TCA 90 bp | CGGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCCAAACACAGTGGTTCTaGGAACAAGACAGACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGASAPDVLEADVVWFQVQTQWF*EQDRQR Trigger: CCTCTGTCTGTCTTGTTCTCAGAACCACTGTGTTTG...GACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTGGTCCGTAGTGTGTGGTaGCTCAGAGAGCACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: ASAPDVLEADVVWFQVSLVRSVW*LREHTG Trigger: TCCTGTGTGCTCTCTGAGCCACCACACACTACGGAC...CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACAAGGTCCGTAGTGTGTaGTGGCTCAGAGAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHKVRSV*WLREHT Trigger: TGTGTGCTCTCTGAGCCACCACACACTACGGACCTT...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACAGAAGGGTTACAGGATaGATCGCCACTGAAAACGTT | + |
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Preference number: 2 (lower is better) Translates to: QGQPCRLQSLVWRSDESHRRVTG*IATENV Trigger: AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCT...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACATGTCCTTACATCCCTaGGAGCCAGCAGAGTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHMSLHP*EPAEFS Trigger: GCTGAACTCTGCTGGCTCCCAGGGATGTAAGGACAT...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCATACATTCAGCTTTCTaGCTAACCACAGTGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: SCRDSLVLGPGKAYRVRTIHSAF*LTTVKT Trigger: TGTTTTCACTGTGGTTAGTCAGAAAGCTGAATGTAT...GGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACATACATTCAGCTTTCTaGCTAACCACAGTGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: ELQRLPGPWTWESLSGEDIHSAF*LTTVKT Trigger: TGTTTTCACTGTGGTTAGTCAGAAAGCTGAATGTAT...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCAGGGACTGTGAGCCATaGTTAGAGAAACTTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GRESEAVSRKAREELQRLRDCEP*LEKLKV Trigger: GACCTTAAGTTTCTCTAATCATGGCTCACAGTCCCT...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTGAGAAGGGTTACAGGATaGATCGCCACTGAAAACGTT | + |
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Preference number: 2 (lower is better) Translates to: ASAPDVLEADVVWFQVSLRRVTG*IATENV Trigger: AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCT...CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACAACAGCATGAGTATTTaGGGCACACATCAGAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHNSMSI*GTHQKY Trigger: GTACTTCTGATGTGTGCCCCAAATACTCATGCTGTT...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCAACAGCATGAGTATTTaGGGCACACATCAGAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: GRESEAVSRKAREELQRLNSMSI*GTHQKY Trigger: GTACTTCTGATGTGTGCCCCAAATACTCATGCTGTT...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCCCAAAACTCAGGCAATaGAACAAATTGCTCCTGCGA | + |
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Preference number: 2 (lower is better) Translates to: LQGSVGFCFEICTLWTDTPKLRQ*NKLLLR Trigger: TCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTTGG...GGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 72 bp | AAGGCCCGAGAGGAGCTGCAGAGACTCCCTGGTCCTTaGACCTGGGAAAGCCTATCGGGTGAGGACCCACCT | + |
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Preference number: 3 (lower is better) Translates to: KAREELQRLPGP*TWESLSGEDPP Trigger: AGGTGGGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTCCTCTCGGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 72 bp | CGAGAGGAGCTGCAGAGACTCCCTGGTCCTTGGACCTaGGAAAGCCTATCGGGTGAGGACCCACCTTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: REELQRLPGPWT*ESLSGEDPPCG Trigger: ACCACAAGGTGGGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTCCTCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR GCA 72 bp | ACCTTGGGCTTCCTAGGCAAGGGCAGCCCTGCCGACTaGAGTCTTTGGTCTGGAGGTCAGATGAATCCCACT | + |
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Preference number: 3 (lower is better) Translates to: TLGFLGKGSPAD*SLWSGGQMNPT Trigger: AGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCCAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR GCA 72 bp | AATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTaGAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: NQKLFLGRPERS*RDSLVLGPGKA Trigger: GGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR GCA 72 bp | ATATCCAACCTTGGGCTTCCTAGGCAAGGGCAGCCCTaGCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAA | + |
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Preference number: 3 (lower is better) Translates to: ISNLGLPRQGQP*RLQSLVWRSDE Trigger: TTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCCAAGGTTGGATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR GCA 72 bp | GTGGTCTGGTTTCAAGTCTCCTTGCTACACGTCTTGTaGCAGGTGCTGATTTCACCCCGCTCGTGGGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: VVWFQVSLLHVL*QVLISPRSWEV Trigger: TACCTCCCACGAGCGGGGTGAAATCAGCACCTGGCACAAGACGTGTAGCAAGGAGACTTGAAACCAGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| 3UTR CCA 72 bp | TTCCTAGGCAAGGGCAGCCCTGCCGACTGCAGTCTTTaGTCTGGAGGTCAGATGAATCCCACTGCTCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: FLGKGSPADCSL*SGGQMNPTAQS Trigger: TGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CCA 72 bp | AGGCAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTaGAGGTCAGATGAATCCCACTGCTCAATCATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RQGQPCRLQSLV*RSDESHCSIIR Trigger: TCTAATGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CCA 72 bp | GGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTaGTCTGGTTTCAAGTCTCCTTGCTACACGTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GAPLLLMFWKQT*SGFKSPCYTSC Trigger: ACAAGACGTGTAGCAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CCA 72 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTaGTTTCAAGTCTCCTTGCTACACGTCTTGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ASAPDVLEADVV*FQVSLLHVLCQ Trigger: CTGGCACAAGACGTGTAGCAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR TCA 72 bp | AACACAGTGGTTCTGAGAACAAGACAGACAGAGGCATaGCGTGGGCTGCATCTTCACAGAGTTACGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NTVVLRTRQTEA*RGLHLHRVTSS Trigger: GCTGCTCGTAACTCTGTGAAGATGCAGCCCACGTCATGCCTCTGTCTGTCTTGTTCTCAGAACCACTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR GCA 72 bp | CCTTCCCAAAACTCAGGCAATGCAACAAATTGCTCCTaGGAGATGATGTCCTTACATCCCTGGGAGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSQNSGNATNCS*EMMSLHPWEPA Trigger: TGCTGGCTCCCAGGGATGTAAGGACATCATCTCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CCA 72 bp | CCCAGCAGTGGCTATGAAGGGATCTCCAGGGCTCTGTaGGCTTTTGTTTTGAAATCTGTACACTATGGACCG | + |
|
Preference number: 3 (lower is better) Translates to: PSSGYEGISRAL*AFVLKSVHYGP Trigger: CGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCTGGAGATCCCTTCATAGCCACTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR TCA 72 bp | TTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTaGAAACGTTTGGTTTGCCCAGGGACTGTGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FCQEKGYRMDRH*KRLVCPGTVSH Trigger: ATGGCTCACAGTCCCTGGGCAAACCAAACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCAGACAAGAGGATCCTTaGAACAGCATGAGTATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GRESEAVSRKAREELQRLRQEDP*NSMSIW Trigger: CCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCT...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR TCA 72 bp | AAAACTCAGGCAATGCAACAAATTGCTCCTGCGAGATaGTGTCCTTACATCCCTGGGAGCCAGCAGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KTQAMQQIAPAR*CPYIPGSQQSS Trigger: TGAACTCTGCTGGCTCCCAGGGATGTAAGGACATCATCTCGCAGGAGCAATTTGTTGCATTGCCTGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CCA 72 bp | GGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATaGACCGACACCTTACTAAGTCAACAGTGCCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSVGFCFEICTL*TDTLLSQQCRR Trigger: CCTGCGGCACTGTTGACTTAGTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCCTGTGGGCTTTTGTTTaGAAATCTGTACACTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRESEAVSRKAREELQRLLWAFV*KSVHYG Trigger: TCCATAGTGTACAGATTTCAAAACAAAAGCCCACAG...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACCTGTGGGCTTTTGTTTaGAAATCTGTACACTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHLWAFV*KSVHYG Trigger: TCCATAGTGTACAGATTTCAAAACAAAAGCCCACAG...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR TCA 72 bp | ATGAAGGGATCTCCAGGGCTCTGTGGGCTTTTGTTTTaGAATCTGTACACTATGGACCGACACCTTACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: MKGSPGLCGLLF*NLYTMDRHLTK Trigger: CTTAGTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCTGGAGATCCCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CCA 72 bp | AGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATaGATCGCCACTGAAAACGTTTGGTTTGCCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SQFNSVKRRVTG*IATENVWFAQG Trigger: TCCCTGGGCAAACCAAACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CCA 72 bp | AGCAGACAAGAGGATCCTTTGAACAGCATGAGTATTTaGGGCACACATCAGAAGTACCATTTGTTATGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SRQEDPLNSMSI*GTHQKYHLLWL Trigger: AAGCCATAACAAATGGTACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CAA 72 bp | AGGCGGGAACCGGAAGTAGCCATGCGATATCCAACCTaGGGCTTCCTAGGCAAGGGCAGCCCTGCCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RREPEVAMRYPT*GFLGKGSPADC Trigger: GCAGTCGGCAGGGCTGCCCTTGCCTAGGAAGCCCAAGGTTGGATATCGCATGGCTACTTCCGGTTCCCGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACAGGCCCAGAGCCAGCTaGTCCCAGGTTGGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQPCRLQSLVWRSDESHRPRAS*SQVGAR Trigger: TCTGGCTCCAACCTGGGAGCAGCTGGCTCTGGGCCT...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACCGGCTCCGGTGTGGCTaGCTCCTCGTTCAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQPCRLQSLVWRSDESHRLRCG*LLVQCL Trigger: CAGACACTGAACGAGGAGCCAGCCACACCGGAGCCG...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACGCTCTTCTCGGTGAGTaGCAGCACAGTGCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQRLPGPWTWESLSGEDALLGE*QHSALV Trigger: GACAAGGGCACTGTGCTGGCACTCACCGAGAAGAGC...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | TCACCCCGCTCGTGGGAGGTAGGTGAAGGGCCTGGGCACAAACACAGTGGTTCTTCTGGATCCCGTGCGTaGACATGTCGGCCGTATACA | + |
|
Preference number: 4 (lower is better) Translates to: SPRSWEVGEGPGHKHSGSSGSRA*TCRPYT Trigger: TGTATACGGCCGACATGTTCACGCACGGGATCCAGA...AGAACCACTGTGTTTGTGCCCAGGCCCTTCACCTACCTCCCACGAGCGGGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACACTTGCTGCAGACATTaGGCTCAGCGGTGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQRLPGPWTWESLSGEDTCCRH*AQRCSP Trigger: TGGACTGCACCGCTGAGCGCAATGTCTGCAGCAAGT...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCCCGTGCAGTCCACTTTaGCCACGTAGACCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCRDSLVLGPGKAYRVRTPCSPL*PRRPWH Trigger: ATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGG...GGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACCAGCTGCTCCCAGGTTaGAGCCAGAGCTTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQPCRLQSLVWRSDESHQLLPG*SQSFAV Trigger: CACTGCAAAGCTCTGGCTCCAACCTGGGAGCAGCTG...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | TCACCCCGCTCGTGGGAGGTAGGTGAAGGGCCTGGGCACAAACACAGTGGTTCTCACATAGTCTCTCAGTaGCTCCAAGTCCCGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRSWEVGEGPGHKHSGSHIVSQ*LQVPLS Trigger: GGAAAGCGGGACTTGGAGTCACTGAGAGACTATGTG...AGAACCACTGTGTTTGTGCCCAGGCCCTTCACCTACCTCCCACGAGCGGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCACATAGTCTCTCAGTaGCTCCAAGTCCCGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELQRLPGPWTWESLSGEDHIVSQ*LQVPLS Trigger: GGAAAGCGGGACTTGGAGTCACTGAGAGACTATGTG...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACTCGGCCGTATACAGGTaGTTGGCGTGCGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHSAVYR*LACGSC Trigger: GCAGGACCCGCACGCCAAGCACCTGTATACGGCCGA...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCAGGCCCAGAGCCAGCTaGTCCCAGGTTGGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRESEAVSRKAREELQRLRPRAS*SQVGAR Trigger: TCTGGCTCCAACCTGGGAGCAGCTGGCTCTGGGCCT...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACTGCGATGGTGACATCTaGCAAGCCTGGGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELQRLPGPWTWESLSGEDCDGDI*QAWEFL Trigger: AAGGAATTCCCAGGCTTGTCAGATGTCACCATCGCA...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTTTCTGACTAACCACAGTGAAAACACGTGTGTCTGTGTGAGGTCACGCCTCAGGGGCTCTGGGTaGTTCCGCTTCCGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSFLTNHSENTCVCVRSRLRGSG*FRFRLR Trigger: CCGGAGCCGGAAGCGGAACCACCCAGAGCCCCTGAG...GCGTGACCTCACACAGACACACGTGTTTTCACTGTGGTTAGTCAGAAAGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | TCACCCCGCTCGTGGGAGGTAGGTGAAGGGCCTGGGCACAAACACAGTGGTTCTGCAGCTCAAAGTTGTTaGCCGAGAGCTCATACAACC | + |
|
Preference number: 4 (lower is better) Translates to: SPRSWEVGEGPGHKHSGSAAQSC*PRAHTT Trigger: GGTTGTATGAGCTCTCGGCCAACAACTTTGAGCTGC...AGAACCACTGTGTTTGTGCCCAGGCCCTTCACCTACCTCCCACGAGCGGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CAA 72 bp | CTTCCTAGGCAAGGGCAGCCCTGCCGACTGCAGTCTTaGGTCTGGAGGTCAGATGAATCCCACTGCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPRQGQPCRLQS*VWRSDESHCSI Trigger: GATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTGCCTAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAAAACACGTGTGTCTGTGTGAGGTCACGCCTAAGCCCAGGCTGGATGACTCATACAACCCCTGTTTaGGCTCAGGGGCTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SENTCVCVRSRLSPGWMTHTTPV*AQGLWV Trigger: CACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATG...AGTCATCCAGCCTGGGCTTAGGCGTGACCTCACACAGACACACGTGTTTTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACCGCTTTCCCTTGTACTaGTCCACCTTCTTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGQPCRLQSLVWRSDESHRFPLY*STFLPS Trigger: AGATGGCAAGAAGGTGGATCAGTACAAGGGAAAGCG...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAAAACACGTGTGTCTGTGTGAGGTCACGCCTAAGCCCAGGCTGGATGACTAAGAACATGACGAAGTaGGCGGCGCTCTGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SENTCVCVRSRLSPGWMTKNMTK*AALWIP Trigger: CGGGATCCAGAGCGCCGCGCACTTCGTCATGTTCTT...AGTCATCCAGCCTGGGCTTAGGCGTGACCTCACACAGACACACGTGTTTTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACACTGATCCACCTTCTTaGCATCTCGAAACCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQRLPGPWTWESLSGEDTDPPS*HLETRA Trigger: TGCTCTGGTTTCGAGATGGCAAGAAGGTGGATCAGT...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCGCTCTTCTCGGTGAGTaGCAGCACAGTGCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRESEAVSRKAREELQRLALLGE*QHSALV Trigger: GACAAGGGCACTGTGCTGGCACTCACCGAGAAGAGC...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACTGCTCAATCAGCTCTTCTCGGTGAGTaGCAGCACAGTGCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PADCSLWSGGQMNPTAQSALLGE*QHSALV Trigger: GACAAGGGCACTGTGCTGGCACTCACCGAGAAGAGC...TGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACTGCTCAATCACAGGTCATTCCAAGTTaGCTGCAGCCGCTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PADCSLWSGGQMNPTAQSQVIPS*LQPLAV Trigger: CACTGCCAGCGGCTGCAGCCAACTTGGAATGACCTG...TGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCTATCCTCGCACTCCCTaGGCAGAGCACACGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRESEAVSRKAREELQRLYPRTP*AEHTSE Trigger: TTCCGACGTGTGCTCTGCCCAGGGAGTGCGAGGATA...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGCCCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACGCAGCTCAAAGTTGTTaGCCGAGAGCTCATACAACC | + |
|
Preference number: 4 (lower is better) Translates to: QGQPCRLQSLVWRSDESHAAQSC*PRAHTT Trigger: GGTTGTATGAGCTCTCGGCCAACAACTTTGAGCTGC...GTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGGGCTGCCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAAAACACGTGTGTCTGTGTGAGGTCACGCCTAAGCCCAGGCTGGATGACTCAGCTGCTCCCAGGTTaGAGCCAGAGCTTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SENTCVCVRSRLSPGWMTQLLPG*SQSFAV Trigger: CACTGCAAAGCTCTGGCTCCAACCTGGGAGCAGCTG...AGTCATCCAGCCTGGGCTTAGGCGTGACCTCACACAGACACACGTGTTTTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| 3UTR CAA 72 bp | ATAACAGGCTGGCGGGGCGCCTCTGCTCCTGATGTTTaGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITGWRGASAPDV*EADVVWFQVSL Trigger: CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCGCCAGCCTGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTGCATACAACCCCTGTTTaGGCTCAGGGGCTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASAPDVLEADVVWFQVSLHTTPV*AQGLWV Trigger: CACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATG...CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAAAACACGTGTGTCTGTGTGAGGTCACGCCTAAGCCCAGGCTGGATGACTTCATTCCAAGTTGGCTaGAGCCGCTGGCAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SENTCVCVRSRLSPGWMTSFQVG*SRWQCP Trigger: TGGACACTGCCAGCGGCTGCAGCCAACTTGGAATGA...AGTCATCCAGCCTGGGCTTAGGCGTGACCTCACACAGACACACGTGTTTTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACACCCTGGTACTTCACTaGTTCTTGTCCAGGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELQRLPGPWTWESLSGEDTLVLH*FLSRLK Trigger: TTTAAGCCTGGACAAGAAGCAGTGAAGTACCAGGGT...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | TCACCCCGCTCGTGGGAGGTAGGTGAAGGGCCTGGGCACAAACACAGTGGTTCTACCCTGGTACTTCACTaGTTCTTGTCCAGGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPRSWEVGEGPGHKHSGSTLVLH*FLSRLK Trigger: TTTAAGCCTGGACAAGAAGCAGTGAAGTACCAGGGT...AGAACCACTGTGTTTGTGCCCAGGCCCTTCACCTACCTCCCACGAGCGGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACATAAAGTGGTTGCCTTaGGAAACATGCAGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELQRLPGPWTWESLSGEDIKWLP*ETCSSK Trigger: CTTTGAGCTGCATGTTTCTCAAGGCAACCACTTTAT...GTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCGAGTTGGATAGCCTCTaGCCTGATGCTCTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRESEAVSRKAREELQRLELDSL*PDALSR Trigger: TCTGCTCAGAGCATCAGGTCAGAGGCTATCCAACTC...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCACTGATCCACCTTCTTaGCATCTCGAAACCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGASAPDVLEADVVWFQVTDPPS*HLETRA Trigger: TGCTCTGGTTTCGAGATGGCAAGAAGGTGGATCAGT...GACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTGACTTGCTGCAGACATTaGGCTCAGCGGTGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASAPDVLEADVVWFQVSLTCCRH*AQRCSP Trigger: TGGACTGCACCGCTGAGCGCAATGTCTGCAGCAAGT...CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACTAAGGGCGCGAAGAACATaGCGAAGTGCGCGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVGFCFEICTLWTDTLLRARRT*RSARRS Trigger: AGAGCGCCGCGCACTTCGTCATGTTCTTCGCGCCCT...TAGTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
||
| CDS-3UTR TCA 90 bp | GCACACAGGAAGCAACACAAGCTCAATACATTCAGCTTTCTGACTAACCACAGTGCCAGAGCTTTGCAGTaGCCGCACCACGGAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHRKQHKLNTFSFLTNHSARALQ*PHHGAK Trigger: CTTCGCTCCGTGGTGCGGTCACTGCAAAGCTCTGGC...ACTGTGGTTAGTCAGAAAGCTGAATGTATTGAGCTTGTGTTGCTTCCTGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGGCCAGAGCTTTGCAGTaGCCGCACCACGGAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAKGANLILSREGLQDGSARALQ*PHHGAK Trigger: CTTCGCTCCGTGGTGCGGTCACTGCAAAGCTCTGGC...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAAAACACGTGTGTCTGTGTGAGGTCACGCCTAAGCCCAGGCTGGATGACTCGCTTTCCCTTGTACTaGTCCACCTTCTTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SENTCVCVRSRLSPGWMTRFPLY*STFLPS Trigger: AGATGGCAAGAAGGTGGATCAGTACAAGGGAAAGCG...AGTCATCCAGCCTGGGCTTAGGCGTGACCTCACACAGACACACGTGTTTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTTTCTGACTAACCACAGTGAAAACACGTGTGTCTGTGTGAGGTCACGCTTGGAGCCAGAGCTTTaGAGTGACCGCACCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSFLTNHSENTCVCVRSRLEPEL*SDRTTE Trigger: CTCCGTGGTGCGGTCACTGCAAAGCTCTGGCTCCAA...GCGTGACCTCACACAGACACACGTGTTTTCACTGTGGTTAGTCAGAAAGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGAGGATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTAAGGCCCAGAGCCAGCTaGTCCCAGGTTGGAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTRGSFEQHEYLGHTSEVRPRAS*SQVGAR Trigger: TCTGGCTCCAACCTGGGAGCAGCTGGCTCTGGGCCT...TACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACCCGTATACAGGTGCTTaGCGTGCGGGTCCTGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RALWAFVLKSVHYGPTPYPYTGA*RAGPAR Trigger: TCGAGCAGGACCCGCACGCCAAGCACCTGTATACGG...GTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTTTCTGACTAACCACAGTGAAAACACGTGTGTCTGTGTGAGGTCACGCTATCCTCGCACTCCCTaGGCAGAGCACACGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSFLTNHSENTCVCVRSRYPRTP*AEHTSE Trigger: TTCCGACGTGTGCTCTGCCCAGGGAGTGCGAGGATA...GCGTGACCTCACACAGACACACGTGTTTTCACTGTGGTTAGTCAGAAAGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | GCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGCGGCTCCGGTGTGGCTaGCTCCTCGTTCAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ANLILSREGLQDGSPLKTRLRCG*LLVQCL Trigger: CAGACACTGAACGAGGAGCCAGCCACACCGGAGCCG...CGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCGGCTCCGGTGTGGCTaGCTCCTCGTTCAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAKGANLILSREGLQDGSRLRCG*LLVQCL Trigger: CAGACACTGAACGAGGAGCCAGCCACACCGGAGCCG...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTTCTCAGGGGCTCTGGGTaGTTCCGCTTCCGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QFNSVKRRVTGWIATENVLRGSG*FRFRLR Trigger: CCGGAGCCGGAAGCGGAACCACCCAGAGCCCCTGAG...AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTACCATTTGTTACTCAGGGGCTCTGGGTaGTTCCGCTTCCGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DPLNSMSIWGTHQKYHLLLRGSG*FRFRLR Trigger: CCGGAGCCGGAAGCGGAACCACCCAGAGCCCCTGAG...TAACAAATGGTACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCGAGTTGGATAGCCTCTaGCCTGATGCTCTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQGSVGFCFEICTLWTDTELDSL*PDALSR Trigger: TCTGCTCAGAGCATCAGGTCAGAGGCTATCCAACTC...GGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | GCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGGCGCTCTGGATCCCGTaGGTGAACATGTCGGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ANLILSREGLQDGSPLKTALWIP*VNMSAV Trigger: TACGGCCGACATGTTCACGCACGGGATCCAGAGCGC...CGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTTTCTGACTAACCACAGTGAAAACACGTGTGTCTGTGTGAGGTCACGCTCATTCCAAGTTGGCTaGAGCCGCTGGCAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFLTNHSENTCVCVRSRSFQVG*SRWQCP Trigger: TGGACACTGCCAGCGGCTGCAGCCAACTTGGAATGA...GCGTGACCTCACACAGACACACGTGTTTTCACTGTGGTTAGTCAGAAAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACTTGGAGCCAGAGCTTTaGAGTGACCGCACCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RALWAFVLKSVHYGPTPYLEPEL*SDRTTE Trigger: CTCCGTGGTGCGGTCACTGCAAAGCTCTGGCTCCAA...GTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTTTCTGACTAACCACAGTGAAAACACGTGTGTCTGTGTGAGGTCACGCACTTGCTGCAGACATTaGGCTCAGCGGTGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFLTNHSENTCVCVRSRTCCRH*AQRCSP Trigger: TGGACTGCACCGCTGAGCGCAATGTCTGCAGCAAGT...GCGTGACCTCACACAGACACACGTGTTTTCACTGTGGTTAGTCAGAAAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | GCACACAGGAAGCAACACAAGCTCAATACATTCAGCTTTCTGACTAACCACAGTAAGTGCGCGGCGCTCTaGATCCCGTGCGTGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: AHRKQHKLNTFSFLTNHSKCAAL*IPCVNM Trigger: CATGTTCACGCACGGGATCCAGAGCGCCGCGCACTT...ACTGTGGTTAGTCAGAAAGCTGAATGTATTGAGCTTGTGTTGCTTCCTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
||
| CDS-3UTR GCA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACACCCTGGTACTTCACTaGTTCTTGTCCAGGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHTLVLH*FLSRLK Trigger: TTTAAGCCTGGACAAGAAGCAGTGAAGTACCAGGGT...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGAGGATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTATATCCTCGCACTCCCTaGGCAGAGCACACGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTRGSFEQHEYLGHTSEVYPRTP*AEHTSE Trigger: TTCCGACGTGTGCTCTGCCCAGGGAGTGCGAGGATA...TACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCAGCTGCTCCCAGGTTaGAGCCAGAGCTTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAKGANLILSREGLQDGSQLLPG*SQSFAV Trigger: CACTGCAAAGCTCTGGCTCCAACCTGGGAGCAGCTG...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAAAACACGTGTGTCTGTGTGAGGTCACGCCTAAGCCCAGGCTGGATGACTCAACCTTGCCAATCTTaGCGGTTTCAGAATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SENTCVCVRSRLSPGWMTQPCQS*RFQNVQ Trigger: TTGAACATTCTGAAACCGTCAAGATTGGCAAGGTTG...AGTCATCCAGCCTGGGCTTAGGCGTGACCTCACACAGACACACGTGTTTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACCACATAGTCTCTCAGTaGCTCCAAGTCCCGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RALWAFVLKSVHYGPTPYHIVSQ*LQVPLS Trigger: GGAAAGCGGGACTTGGAGTCACTGAGAGACTATGTG...GTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GCACACAGGAAGCAACACAAGCTCAATACATTCAGCTTTCTGACTAACCACAGTCCACTTCTGCGATGGTaGCATCTGACAAGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHRKQHKLNTFSFLTNHSPLLRW*HLTSLG Trigger: TCCCAGGCTTGTCAGATGTCACCATCGCAGAAGTGG...ACTGTGGTTAGTCAGAAAGCTGAATGTATTGAGCTTGTGTTGCTTCCTGTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGCCACTTCTGCGATGGTaGCATCTGACAAGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANLILSREGLQDGSPLKTPLLRW*HLTSLG Trigger: TCCCAGGCTTGTCAGATGTCACCATCGCAGAAGTGG...CGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTTCTGCGATGGTaGCATCTGACAAGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAKGANLILSREGLQDGSPLLRW*HLTSLG Trigger: TCCCAGGCTTGTCAGATGTCACCATCGCAGAAGTGG...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCGTGCAGTCCACTTTaGCCACGTAGACCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VAKGANLILSREGLQDGSPCSPL*PRRPWH Trigger: ATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGG...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGAGGATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTACCGTGCAGTCCACTTTaGCCACGTAGACCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTRGSFEQHEYLGHTSEVPCSPL*PRRPWH Trigger: ATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGG...TACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | CAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTTCATACAACCCCTGTTTaGGCTCAGGGGCTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFNSVKRRVTGWIATENVHTTPV*AQGLWV Trigger: CACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATG...AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTGCAACCTTGCCAATCTTaGCGGTTTCAGAATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASAPDVLEADVVWFQVSLQPCQS*RFQNVQ Trigger: TTGAACATTCTGAAACCGTCAAGATTGGCAAGGTTG...CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR GCA 90 bp | GATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTACCATTTGTTATTGGAGCCAGAGCTTTaGAGTGACCGCACCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DPLNSMSIWGTHQKYHLLLEPEL*SDRTTE Trigger: CTCCGTGGTGCGGTCACTGCAAAGCTCTGGCTCCAA...TAACAAATGGTACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTTCAGGTCATTCCAAGTTaGCTGCAGCCGCTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFNSVKRRVTGWIATENVQVIPS*LQPLAV Trigger: CACTGCCAGCGGCTGCAGCCAACTTGGAATGACCTG...AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTGGCCACGTAGACCTTaGCATCCTCCATGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ANLILSREGLQDGSPLKTWPRRP*HPPCCC Trigger: ACAACAGCATGGAGGATGCCAAGGTCTACGTGGCCA...CGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACTACGCTTTCCCTTGTACTaGTCCACCTTCTTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVGFCFEICTLWTDTLLRFPLY*STFLPS Trigger: AGATGGCAAGAAGGTGGATCAGTACAAGGGAAAGCG...TAGTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR TCA 90 bp | GCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTGCGATGGTGACATCTaGCAAGCCTGGGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANLILSREGLQDGSPLKTCDGDI*QAWEFL Trigger: AAGGAATTCCCAGGCTTGTCAGATGTCACCATCGCA...CGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR GCA 90 bp | GCACACAGGAAGCAACACAAGCTCAATACATTCAGCTTTCTGACTAACCACAGTACTGATCCACCTTCTTaGCATCTCGAAACCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHRKQHKLNTFSFLTNHSTDPPS*HLETRA Trigger: TGCTCTGGTTTCGAGATGGCAAGAAGGTGGATCAGT...ACTGTGGTTAGTCAGAAAGCTGAATGTATTGAGCTTGTGTTGCTTCCTGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR GCA 90 bp | GGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACTAGAAGGTTATCCCCTGTaGAATAGTGTCCTCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVGFCFEICTLWTDTLLEGYPL*NSVLEA Trigger: AGCTTCGAGGACACTATTGCACAGGGGATAACCTTC...TAGTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CCA 90 bp | GGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACTAAGTTCATCCTTTGCCTaGCGCAGAACAAAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVGFCFEICTLWTDTLLSSSFA*RRTKLC Trigger: ACACAGCTTTGTTCTGCGCCAGGCAAAGGATGAACT...TAGTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CCA 90 bp | GCACACAGGAAGCAACACAAGCTCAATACATTCAGCTTTCTGACTAACCACAGTAGTTCATCCTTTGCCTaGCGCAGAACAAAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AHRKQHKLNTFSFLTNHSSSSFA*RRTKLC Trigger: ACACAGCTTTGTTCTGCGCCAGGCAAAGGATGAACT...ACTGTGGTTAGTCAGAAAGCTGAATGTATTGAGCTTGTGTTGCTTCCTGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR TCA 90 bp | CAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTTTGCGATGGTGACATCTaGCAAGCCTGGGAATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFNSVKRRVTGWIATENVCDGDI*QAWEFL Trigger: AAGGAATTCCCAGGCTTGTCAGATGTCACCATCGCA...AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR GCA 90 bp | CAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTTGAAGGTTATCCCCTGTaGAATAGTGTCCTCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QFNSVKRRVTGWIATENVEGYPL*NSVLEA Trigger: AGCTTCGAGGACACTATTGCACAGGGGATAACCTTC...AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR TCA 90 bp | CAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTTATAAAGTGGTTGCCTTaGGAAACATGCAGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFNSVKRRVTGWIATENVIKWLP*ETCSSK Trigger: CTTTGAGCTGCATGTTTCTCAAGGCAACCACTTTAT...AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR TCA 90 bp | GATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTACCATTTGTTAATAAAGTGGTTGCCTTaGGAAACATGCAGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPLNSMSIWGTHQKYHLLIKWLP*ETCSSK Trigger: CTTTGAGCTGCATGTTTCTCAAGGCAACCACTTTAT...TAACAAATGGTACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR TCA 90 bp | GATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTACCATTTGTTACAACCTTGCCAATCTTaGCGGTTTCAGAATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DPLNSMSIWGTHQKYHLLQPCQS*RFQNVQ Trigger: TTGAACATTCTGAAACCGTCAAGATTGGCAAGGTTG...TAACAAATGGTACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 90 bp | TGCGTGAACATGTCGGCCGTATACAGGTGCTTGGCGTGCGGGTCCTaGTCGACCCCGCTGTCCGCTTCCACCTCCTGGGCCCGGGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CVNMSAVYRCLACGS*STPLSASTSWARAP Trigger: AGGCGCCCGGGCCCAGGAGGTGGAAGCGGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS GCA 90 bp | GCGGCGCTCTGGATCCCGTGCGTGAACATGTCGGCCGTATACAGGTaGTTGGCGTGCGGGTCCTGCTCGACCCCGCTGTCCGCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AALWIPCVNMSAVYR*LACGSCSTPLSAST Trigger: GGTGGAAGCGGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCACGGGATCCAGAGCGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS GCA 90 bp | TGGATCCCGTGCGTGAACATGTCGGCCGTATACAGGTGCTTGGCGTaGGGGTCCTGCTCGACCCCGCTGTCCGCTTCCACCTCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WIPCVNMSAVYRCLA*GSCSTPLSASTSWA Trigger: GGCCCAGGAGGTGGAAGCGGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCACGGGATCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS GCA 90 bp | CAGGGCGCGAAGAACATGACGAAGTGCGCGGCGCTCTGGATCCCGTaGGTGAACATGTCGGCCGTATACAGGTGCTTGGCGTGCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGAKNMTKCAALWIP*VNMSAVYRCLACGS Trigger: GGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCACGGGATCCAGAGCGCCGCGCACTTCGTCATGTTCTTCGCGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS CCA 90 bp | GGCCGAGAGCTCATACAACCCCTGTTTGAGCTCAGGGGCTCTGGGTaGTTCCGCTTCCGGCTCCGGTGTGGCTGGCTCCTCGTTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRELIQPLFELRGSG*FRFRLRCGWLLVQC Trigger: ACACTGAACGAGGAGCCAGCCACACCGGAGCCGGAAGCGGAACCACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGAGCTCTCGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS TCA 90 bp | CATGCAGCTCAAAGTTGTTGGCCGAGAGCTCATACAACCCCTGTTTaGGCTCAGGGGCTCTGGGTGGTTCCGCTTCCGGCTCCGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HAAQSCWPRAHTTPV*AQGLWVVPLPAPVW Trigger: CCACACCGGAGCCGGAAGCGGAACCACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGAGCTCTCGGCCAACAACTTTGAGCTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 90 bp | GGTATCCTCGCACTCCCTGGGCAGAGCACACGTCGGAATCAGCCGTaGAGTCCACTTTGGCCACGTAGACCTTGGCATCCTCCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GILALPGQSTRRNQP*SPLWPRRPWHPPCC Trigger: ACAGCATGGAGGATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGGCTGATTCCGACGTGTGCTCTGCCCAGGGAGTGCGAGGATACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCTACTTGCTGCAGACATaGCGCTCAGCGGTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCRDSLVLGPGKAYRVRTYLLQT*RSAVQS Trigger: GGACTGCACCGCTGAGCGCAATGTCTGCAGCAAGTA...GGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 90 bp | GGTTATCCCCTGTGCAATAGTGTCCTCGAAGCTCTTCTCGGTGAGTaGCAGCACAGTGCCCTTGTCACCCGTGGGCTCAGCAGCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: GYPLCNSVLEALLGE*QHSALVTRGLSSHH Trigger: GTGATGGCTGCTGAGCCCACGGGTGACAAGGGCACTGTGCTGGCACTCACCGAGAAGAGCTTCGAGGACACTATTGCACAGGGGATAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACGCCGTATACAGGTGCTaGGCGTGCGGGTCCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHAVYRC*ACGSCS Trigger: CGAGCAGGACCCGCACGCCAAGCACCTGTATACGGC...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS-3UTR CAA 90 bp | CGGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCCCAGGTCATTCCAAGTaGGCTGCAGCCGCTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGASAPDVLEADVVWFQVPGHSK*AAAAGS Trigger: ACTGCCAGCGGCTGCAGCCAACTTGGAATGACCTGG...GACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACGCCAGCACAGTGCCCTaGTCACCCGTGGGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHASTVP*SPVGSA Trigger: TGCTGAGCCCACGGGTGACAAGGGCACTGTGCTGGC...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS CCA 90 bp | CTCCCTGGGCAGAGCACACGTCGGAATCAGCCGTGCAGTCCACTTTaGCCACGTAGACCTTGGCATCCTCCATGCTGTTGTACTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPGQSTRRNQPCSPL*PRRPWHPPCCCTCL Trigger: GAGACAAGTACAACAGCATGGAGGATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGGCTGATTCCGACGTGTGCTCTGCCCAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | TCACCCCGCTCGTGGGAGGTAGGTGAAGGGCCTGGGCACAAACACAGTGGTTCTGCATCCTCCATGCTGTaGTACTTGTCTCCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRSWEVGEGPGHKHSGSASSML*YLSPRS Trigger: TGACCTGGGAGACAAGTACAACAGCATGGAGGATGC...AGAACCACTGTGTTTGTGCCCAGGCCCTTCACCTACCTCCCACGAGCGGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTGGCCAGCACAGTGCCCTaGTCACCCGTGGGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASAPDVLEADVVWFQVSLASTVP*SPVGSA Trigger: TGCTGAGCCCACGGGTGACAAGGGCACTGTGCTGGC...CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 90 bp | CAGCCGTGCAGTCCACTTTGGCCACGTAGACCTTGGCATCCTCCATaGTGTTGTACTTGTCTCCCAGGTCATTCCAAGTTGGCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPCSPLWPRRPWHPP*CCTCLPGHSKLAAA Trigger: GGCTGCAGCCAACTTGGAATGACCTGGGAGACAAGTACAACAGCATGGAGGATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS GCA 90 bp | CTCCTCGGAAAAGCAGCAACGTGGGATAACCTCGTACCGAGTACTTaGTGCAGACATTGCGCTCAGCGGTGCAGTCCACTTCTGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGKAATWDNLVPST*CRHCAQRCSPLLRW Trigger: CCATCGCAGAAGTGGACTGCACCGCTGAGCGCAATGTCTGCAGCAAGTACTCGGTACGAGGTTATCCCACGTTGCTGCTTTTCCGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | CGGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCATACAACCCCTGTTaGAGCTCAGGGGCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGASAPDVLEADVVWFQVSYNPC*SSGALG Trigger: ACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGA...GACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGAGACTCCCTGGTCCTTGGACCTGGGAAAGCCTATCGGGTGAGGACCACATGCAGCTCAAAGTaGTTGGCCGAGAGCTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SCRDSLVLGPGKAYRVRTTCSSK*LAESSY Trigger: GTATGAGCTCTCGGCCAACAACTTTGAGCTGCATGT...GGTCCTCACCCGATAGGCTTTCCCAGGTCCAAGGACCAGGGAGTCTCTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCTACTTGCTGCAGACATaGCGCTCAGCGGTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRESEAVSRKAREELQRLYLLQT*RSAVQS Trigger: GGACTGCACCGCTGAGCGCAATGTCTGCAGCAAGTA...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACTACTTGCTGCAGACATaGCGCTCAGCGGTGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHYLLQT*RSAVQS Trigger: GGACTGCACCGCTGAGCGCAATGTCTGCAGCAAGTA...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS TCA 90 bp | GACATTGCGCTCAGCGGTGCAGTCCACTTCTGCGATGGTGACATCTaGCAAGCCTGGGAATTCCTTTTTAGAGAGCTCCTCCCAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DIALSGAVHFCDGDI*QAWEFLFRELLPGR Trigger: CCTACCTGGGAGGAGCTCTCTAAAAAGGAATTCCCAGGCTTGTCAGATGTCACCATCGCAGAAGTGGACTGCACCGCTGAGCGCAATGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 90 bp | GTGGCCACACCACGGAGCATAGAACTTGACGAAGGTTATCCCCTGTaGAATAGTGTCCTCGAAGCTCTTCTCGGTGAGTGCCAGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: VATPRSIELDEGYPL*NSVLEALLGECQHS Trigger: ACTGTGCTGGCACTCACCGAGAAGAGCTTCGAGGACACTATTGCACAGGGGATAACCTTCGTCAAGTTCTATGCTCCGTGGTGTGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | CACCTTGTGGTGCATCCCATACCCTCCCTTTCTGCAGAAGACGTACATCTCCACTCATACAACCCCTGTTaGAGCTCAGGGGCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLVVHPIPSLSAEDVHLHSYNPC*SSGALG Trigger: ACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGA...GTGGAGATGTACGTCTTCTGCAGAAAGGGAGGGTATGGGATGCACCACAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGGCCAGCACAGTGCCCTaGTCACCCGTGGGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VAKGANLILSREGLQDGSASTVP*SPVGSA Trigger: TGCTGAGCCCACGGGTGACAAGGGCACTGTGCTGGC...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GGAAGAGAATCAGAAGCTGTTTCTAGGAAGGCCCGAGAGGAGCTGCAGAGACTCTGCGTGCAGTCAACCTaGCCAATCTTGACGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRESEAVSRKAREELQRLCVQST*PILTVS Trigger: TGAAACCGTCAAGATTGGCAAGGTTGACTGCACGCA...GAGTCTCTGCAGCTCCTCTCGGGCCTTCCTAGAAACAGCTTCTGATTCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | CAGACAAGAGGATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTACCAGGTCATTCCAAGTaGGCTGCAGCCGCTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTRGSFEQHEYLGHTSEVPGHSK*AAAAGS Trigger: ACTGCCAGCGGCTGCAGCCAACTTGGAATGACCTGG...TACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | CTCCAGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCGCATCCTCCATGCTGTaGTACTTGTCTCCCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQGSVGFCFEICTLWTDTASSML*YLSPRS Trigger: TGACCTGGGAGACAAGTACAACAGCATGGAGGATGC...GGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | GCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCCTTGACATGCAGCTCAAAGTaGTTGGCCGAGAGCTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: ASAPDVLEADVVWFQVSLTCSSK*LAESSY Trigger: GTATGAGCTCTCGGCCAACAACTTTGAGCTGCATGT...CAAGGAGACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | CGGGGCGCCTCTGCTCCTGATGTTTTGGAAGCAGACGTGGTCTGGTTTCAAGTCTCAACCTTGCCAATCTaGACGGTTTCAGAATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGASAPDVLEADVVWFQVSTLPI*TVSECS Trigger: TGAACATTCTGAAACCGTCAAGATTGGCAAGGTTGA...GACTTGAAACCAGACCACGTCTGCTTCCAAAACATCAGGAGCAGAGGCGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGTCATACAACCCCTGTTaGAGCTCAGGGGCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VAKGANLILSREGLQDGSSYNPC*SSGALG Trigger: ACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGA...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCGACTGCAGTCTTTGGTCTGGAGGTCAGATGAATCCCACTGCTCAATCATCAACCTTGCCAATCTaGACGGTTTCAGAATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PADCSLWSGGQMNPTAQSSTLPI*TVSECS Trigger: TGAACATTCTGAAACCGTCAAGATTGGCAAGGTTGA...TGATTGAGCAGTGGGATTCATCTGACCTCCAGACCAAAGACTGCAGTCGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTGTGGGCTTTTGTTTTGAAATCTGTACACTATGGACCGACACCTTACACATGCAGCTCAAAGTaGTTGGCCGAGAGCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: RALWAFVLKSVHYGPTPYTCSSK*LAESSY Trigger: GTATGAGCTCTCGGCCAACAACTTTGAGCTGCATGT...GTAAGGTGTCGGTCCATAGTGTACAGATTTCAAAACAAAAGCCCACAGAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGTGCAGCTCAAAGTTGTaGGCCGAGAGCTCATACAAC | + |
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Preference number: 5 (lower is better) Translates to: VAKGANLILSREGLQDGSCSSKL*AESSYN Trigger: GTTGTATGAGCTCTCGGCCAACAACTTTGAGCTGCA...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTGCAGCTCAAAGTTGTaGGCCGAGAGCTCATACAAC | + |
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Preference number: 5 (lower is better) Translates to: ANLILSREGLQDGSPLKTCSSKL*AESSYN Trigger: GTTGTATGAGCTCTCGGCCAACAACTTTGAGCTGCA...CGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | CAGACAAGAGGATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTATGCGTGCAGTCAACCTaGCCAATCTTGACGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: QTRGSFEQHEYLGHTSEVCVQST*PILTVS Trigger: TGAAACCGTCAAGATTGGCAAGGTTGACTGCACGCA...TACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATCCTCTTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTGCGTGCAGTCAACCTaGCCAATCTTGACGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: ANLILSREGLQDGSPLKTCVQST*PILTVS Trigger: TGAAACCGTCAAGATTGGCAAGGTTGACTGCACGCA...CGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS-3UTR CAA 90 bp | GTTGCAAAGGGAGCCAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGTCCATGCTGTTGTACTaGTCTCCCAGGTCATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: VAKGANLILSREGLQDGSSMLLY*SPRSFQ Trigger: TTGGAATGACCTGGGAGACAAGTACAACAGCATGGA...CGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTGGCTCCCTTTGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | CAATTTAATTCTGTCAAGAGAAGGGTTACAGGATGGATCGCCACTGAAAACGTTTCCATGCTGTTGTACTaGTCTCCCAGGTCATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QFNSVKRRVTGWIATENVSMLLY*SPRSFQ Trigger: TTGGAATGACCTGGGAGACAAGTACAACAGCATGGA...AACGTTTTCAGTGGCGATCCATCCTGTAACCCTTCTCTTGACAGAATTAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS-3UTR CAA 90 bp | GATCCTTTGAACAGCATGAGTATTTGGGGCACACATCAGAAGTACCATTTGTTATCAACCTTGCCAATCTaGACGGTTTCAGAATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: DPLNSMSIWGTHQKYHLLSTLPI*TVSECS Trigger: TGAACATTCTGAAACCGTCAAGATTGGCAAGGTTGA...TAACAAATGGTACTTCTGATGTGTGCCCCAAATACTCATGCTGTTCAAAGGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 72 bp | CGCTGTCCGCTTCCACCTCCTGGGCCCGGGCGCCTTTaGGCGCCCCGAGCAGCAGCAGGAGCGTGGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RCPLPPPGPGRL*APRAAAGAWPG Trigger: CCCTGGCCACGCTCCTGCTGCTGCTCGGGGCGCGCAAAGGCGCCCGGGCCCAGGAGGTGGAAGCGGACAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS CCA 72 bp | GGGTCCTGCTCGACCCCGCTGTCCGCTTCCACCTCCTaGGCCCGGGCGCCTTTGCGCGCCCCGAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSCSTPLSASTS*ARAPLRAPSSS Trigger: GCTGCTGCTCGGGGCGCGCAAAGGCGCCCGGGCCCAGGAGGTGGAAGCGGACAGCGGGGTCGAGCAGGACCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS GCA 72 bp | ATGTCGGCCGTATACAGGTGCTTGGCGTGCGGGTCCTaGTCGACCCCGCTGTCCGCTTCCACCTCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: MSAVYRCLACGS*STPLSASTSWA Trigger: GGCCCAGGAGGTGGAAGCGGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS CAA 90 bp | GCGCTCTGGATCCCGTGCGTGAACATGTCGGCCGTATACAGGTGCTaGGCGTGCGGGTCCTGCTCGACCCCGCTGTCCGCTTCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: ALWIPCVNMSAVYRC*ACGSCSTPLSASTS Trigger: GGAGGTGGAAGCGGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCACGGGATCCAGAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS GCA 72 bp | TGCGTGAACATGTCGGCCGTATACAGGTGCTTGGCGTaGGGGTCCTGCTCGACCCCGCTGTCCGCTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CVNMSAVYRCLA*GSCSTPLSAST Trigger: GGTGGAAGCGGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS GCA 72 bp | TGGATCCCGTGCGTGAACATGTCGGCCGTATACAGGTaGTTGGCGTGCGGGTCCTGCTCGACCCCGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: WIPCVNMSAVYR*LACGSCSTPLS Trigger: GGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCACGGGATCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS CAA 72 bp | ATCCCGTGCGTGAACATGTCGGCCGTATACAGGTGCTaGGCGTGCGGGTCCTGCTCGACCCCGCTGTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: IPCVNMSAVYRC*ACGSCSTPLSA Trigger: AGCGGACAGCGGGGTCGAGCAGGACCCGCACGCCAAGCACCTGTATACGGCCGACATGTTCACGCACGGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS CCA 72 bp | CTCATACAACCCCTGTTTGAGCTCAGGGGCTCTGGGTaGTTCCGCTTCCGGCTCCGGTGTGGCTGGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LIQPLFELRGSG*FRFRLRCGWLL Trigger: GAGGAGCCAGCCACACCGGAGCCGGAAGCGGAACCACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS CCA 72 bp | CAGGGCGCGAAGAACATGACGAAGTGCGCGGCGCTCTaGATCCCGTGCGTGAACATGTCGGCCGTATACAGG | + |
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Preference number: 6 (lower is better) Translates to: QGAKNMTKCAAL*IPCVNMSAVYR Trigger: CCTGTATACGGCCGACATGTTCACGCACGGGATCCAGAGCGCCGCGCACTTCGTCATGTTCTTCGCGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS CCA 72 bp | GGCTCTGGGTGGTTCCGCTTCCGGCTCCGGTGTGGCTaGCTCCTCGTTCAGTGTCTGCAGCATCCAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSGWFRFRLRCG*LLVQCLQHPVF Trigger: GAAAACTGGATGCTGCAGACACTGAACGAGGAGCCAGCCACACCGGAGCCGGAAGCGGAACCACCCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 72 bp | GCACTCCCTGGGCAGAGCACACGTCGGAATCAGCCGTaGAGTCCACTTTGGCCACGTAGACCTTGGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: ALPGQSTRRNQP*SPLWPRRPWHP Trigger: AGGATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGGCTGATTCCGACGTGTGCTCTGCCCAGGGAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 72 bp | AAGAACATGACGAAGTGCGCGGCGCTCTGGATCCCGTaGGTGAACATGTCGGCCGTATACAGGTGCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: KNMTKCAALWIP*VNMSAVYRCLA Trigger: CGCCAAGCACCTGTATACGGCCGACATGTTCACGCACGGGATCCAGAGCGCCGCGCACTTCGTCATGTTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035988.16 |
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| CDS GCA 72 bp | CTGTGCAATAGTGTCCTCGAAGCTCTTCTCGGTGAGTaGCAGCACAGTGCCCTTGTCACCCGTGGGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LCNSVLEALLGE*QHSALVTRGLS Trigger: GCTGAGCCCACGGGTGACAAGGGCACTGTGCTGGCACTCACCGAGAAGAGCTTCGAGGACACTATTGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS CAA 90 bp | ACATGCAGCTCAAAGTTGTTGGCCGAGAGCTCATACAACCCCTGTTaGAGCTCAGGGGCTCTGGGTGGTTCCGCTTCCGGCTCCGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TCSSKLLAESSYNPC*SSGALGGSASGSGV Trigger: CACACCGGAGCCGGAAGCGGAACCACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGAGCTCTCGGCCAACAACTTTGAGCTGCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS TCA 72 bp | CAAAGTTGTTGGCCGAGAGCTCATACAACCCCTGTTTaGGCTCAGGGGCTCTGGGTGGTTCCGCTTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: QSCWPRAHTTPV*AQGLWVVPLPA Trigger: AGCCGGAAGCGGAACCACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGAGCTCTCGGCCAACAACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS TCA 72 bp | GCCAGCTGCTCCCAGGTTGGAGCCAGAGCTTTGCAGTaGCCGCACCACGGAGCGAAGAACTTGATAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASCSQVGARALQ*PHHGAKNLIKW Trigger: CCACTTTATCAAGTTCTTCGCTCCGTGGTGCGGTCACTGCAAAGCTCTGGCTCCAACCTGGGAGCAGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS CAA 72 bp | TCAAAGTTGTTGGCCGAGAGCTCATACAACCCCTGTTaGAGCTCAGGGGCTCTGGGTGGTTCCGCTTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: SKLLAESSYNPC*SSGALGGSASG Trigger: GCCGGAAGCGGAACCACCCAGAGCCCCTGAGCTCAAACAGGGGTTGTATGAGCTCTCGGCCAACAACTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS CCA 72 bp | CAGAGCACACGTCGGAATCAGCCGTGCAGTCCACTTTaGCCACGTAGACCTTGGCATCCTCCATGCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: QSTRRNQPCSPL*PRRPWHPPCCC Trigger: ACAACAGCATGGAGGATGCCAAGGTCTACGTGGCCAAAGTGGACTGCACGGCTGATTCCGACGTGTGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS TCA 72 bp | TGCCATCTCGAAACCAGAGCAGAGTTGGATAGCCTCTaGCCTGATGCTCTGAGCAGACAGCGTAGTGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: CHLETRAELDSL*PDALSRQRSAA Trigger: CGCAGCACTACGCTGTCTGCTCAGAGCATCAGGTCAGAGGCTATCCAACTCTGCTCTGGTTTCGAGATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS TCA 72 bp | CAGCGTAGTGCTGCGTGCAGTCAACCTTGCCAATCTTaGCGGTTTCAGAATGTTCAAGGCCCAGAGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: QRSAACSQPCQS*RFQNVQGPEPA Trigger: AGCTGGCTCTGGGCCTTGAACATTCTGAAACCGTCAAGATTGGCAAGGTTGACTGCACGCAGCACTACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS TCA 72 bp | CTCAGCGGTGCAGTCCACTTCTGCGATGGTGACATCTaGCAAGCCTGGGAATTCCTTTTTAGAGAGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSGAVHFCDGDI*QAWEFLFRELL Trigger: GAGGAGCTCTCTAAAAAGGAATTCCCAGGCTTGTCAGATGTCACCATCGCAGAAGTGGACTGCACCGCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 72 bp | CCAAGTCCCGCTTTCCCTTGTACTGATCCACCTTCTTaGCATCTCGAAACCAGAGCAGAGTTGGATAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSPAFPCTDPPS*HLETRAELDSL Trigger: GAGGCTATCCAACTCTGCTCTGGTTTCGAGATGGCAAGAAGGTGGATCAGTACAAGGGAAAGCGGGACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS CAA 90 bp | TGGCGCAGAACAAAGCTGTGTAAGGAGTCGAGGTCTCTACCTCCGTaGTGTTCTCCCACTTTTTCACCTCCTCGGAAAAGCAGCAACGTG | + |
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Preference number: 6 (lower is better) Translates to: WRRTKLCKESRSLPP*CSPTFSPPRKSSNV Trigger: CACGTTGCTGCTTTTCCGAGGAGGTGAAAAAGTGGGAGAACACAACGGAGGTAGAGACCTCGACTCCTTACACAGCTTTGTTCTGCGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS TCA 72 bp | TCTCTCAGTGACTCCAAGTCCCGCTTTCCCTTGTACTaGTCCACCTTCTTGCCATCTCGAAACCAGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLSDSKSRFPLY*STFLPSRNQSR Trigger: TCTGCTCTGGTTTCGAGATGGCAAGAAGGTGGATCAGTACAAGGGAAAGCGGGACTTGGAGTCACTGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS GCA 72 bp | AGTCCACTTTGGCCACGTAGACCTTGGCATCCTCCATaGTGTTGTACTTGTCTCCCAGGTCATTCCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SPLWPRRPWHPP*CCTCLPGHSKL Trigger: CAACTTGGAATGACCTGGGAGACAAGTACAACAGCATGGAGGATGCCAAGGTCTACGTGGCCAAAGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 |
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| CDS CCA 72 bp | CTCCCACTTTTTCACCTCCTCGGAAAAGCAGCAACGTaGGATAACCTCGTACCGAGTACTTGCTGCAGACAT | + |
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Preference number: 6 (lower is better) Translates to: LPLFHLLGKAAT*DNLVPSTCCRH Trigger: ATGTCTGCAGCAAGTACTCGGTACGAGGTTATCCCACGTTGCTGCTTTTCCGAGGAGGTGAAAAAGTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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| CDS CAA 72 bp | ACAAAGCTGTGTAAGGAGTCGAGGTCTCTACCTCCGTaGTGTTCTCCCACTTTTTCACCTCCTCGGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: TKLCKESRSLPP*CSPTFSPPRKS Trigger: GCTTTTCCGAGGAGGTGAAAAAGTGGGAGAACACAACGGAGGTAGAGACCTCGACTCCTTACACAGCTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035988.16 ENSMUST00000160653.2 ENSMUST00000162075.8 |
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