Pregenerated sensors for TXNDC15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021497Ensembl transcript IDs: ENSMUST00000021959.11
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACACCACAAAGGAGGGGCTaGGACCCCTCTTGTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QSILVDIFVPASCHRKNTPQRRG*DPSCSS Trigger: ACTGGAACAAGAGGGGTCTCAGCCCCTCCTTTGTGG...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACAAGTCCAACAAGAACATaGTTCTTGAATCTGATTTCC | + |
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Preference number: 2 (lower is better) Translates to: QSILVDIFVPASCHRKNTSPTRT*FLNLIS Trigger: GGAAATCAGATTCAAGAATCATGTTCTTGTTGGACT...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| 3UTR-3UTR CAA 90 bp | CTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTTGACGACACTAGAAAAGAAAGGGCTGAGACCCCTCTaGTTCCAGTTCAGTTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: LSSSSETTLSCLTTLEKKGLRPL*FQFSSV Trigger: GACAGAACTGAACTGGAACAAGAGGGGTCTCAGCCC...TTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| 3UTR GCA 72 bp | TCCAACAAGAACATGATTCTTGAATCTGATTTCCGTTaGAAGTCCACACATTTAGCGACTGTAATGCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: SNKNMILESDFR*KSTHLATVMLS Trigger: ACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGGAAATCAGATTCAAGAATCATGTTCTTGTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| 3UTR TCA 72 bp | AAATCTTTTCAGCTTTTCAGTAGTCCAACAAGAACATaGTTCTTGAATCTGATTTCCGTTGCAAGTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: KSFQLFSSPTRT*FLNLISVASPH Trigger: GTGTGGACTTGCAACGGAAATCAGATTCAAGAATCATGTTCTTGTTGGACTACTGAAAAGCTGAAAAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | AGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCTGAGACCCCTCTTGTTCCAGCCTGCGCACTGCAGGTaGCATCGTGGGCCTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SDCNAKSTKEGLRPLLFQPAHCR*HRGPRG Trigger: GCCCCGAGGCCCACGATGGCACCTGCAGTGCGCAGG...CTGGAACAAGAGGGGTCTCAGCCCCTCCTTTGTGGACTTAGCATTACAGTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | AGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCTGAGACCCCTCTTGTTCCAGGCAACCTCCAGGCCGTaGGCCGGAAGGCCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SDCNAKSTKEGLRPLLFQATSRP*AGRPST Trigger: GGTGCTGGGCCTTCCGGCCCACGGCCTGGAGGTTGC...CTGGAACAAGAGGGGTCTCAGCCCCTCCTTTGTGGACTTAGCATTACAGTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | AGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCTGAGACCCCTCTTGTTCCAGGGGTCCTCCTCTCCCTaGGCACTGCAGGTGCCATCG | + |
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Preference number: 4 (lower is better) Translates to: SDCNAKSTKEGLRPLLFQGSSSP*ALQVPS Trigger: CGATGGCACCTGCAGTGCGCAGGGAGAGGAGGACCC...CTGGAACAAGAGGGGTCTCAGCCCCTCCTTTGTGGACTTAGCATTACAGTCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCCTCTCCCTGCGCACTaGAGGTGCCATCGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGPLPAH*RCHRGP Trigger: AGGCCCACGATGGCACCTGCAGTGCGCAGGGAGAGG...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR TCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGTGCCCCAGGGACCACTaGCAGCACCACCATGGGATC | + |
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Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGCPRDH*QHHHGI Trigger: GATCCCATGGTGGTGCTGTCAGTGGTCCCTGGGGCA...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGGTGACCACTGTCCTCTaGAACCTCCAGGCCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGVTTVL*NLQAVG Trigger: GCCCACGGCCTGGAGGTTGCAGAGGACAGTGGTCAC...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR TCA 90 bp | AGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCTGAGACCCCTCTTGTTCCAGGAAAGGCTGCTGTGCTaGGATGCATCCAGAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SDCNAKSTKEGLRPLLFQERLLC*DASRAK Trigger: CTTGGCTCTGGATGCATCTCAGCACAGCAGCCTTTC...CTGGAACAAGAGGGGTCTCAGCCCCTCCTTTGTGGACTTAGCATTACAGTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR TCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGTCACCTTGGGGGACTTaGGGCTGTCAGTGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGSPWGT*GCQCCW Trigger: CCAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGA...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGAATGAGGAGCCAGGCTaGCAGAAAACCGGCACCACG | + |
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Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGNEEPG*QKTGTT Trigger: CGTGGTGCCGGTTTTCTGCCAGCCTGGCTCCTCATT...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | AGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCTGAGACCCCTCTTGTTCCAGCCCATCTGGTCAGCCTaGGTTACCACCACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDCNAKSTKEGLRPLLFQPIWSA*VTTTFF Trigger: GAAAAATGTGGTGGTAACGCAGGCTGACCAGATGGG...CTGGAACAAGAGGGGTCTCAGCCCCTCCTTTGTGGACTTAGCATTACAGTCGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACAGCCTCGGGGCTCCGTTaGTCCTCAGCTGCCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTASGLR*SSAAPG Trigger: CCCTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGC...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGTCTTTATCAAAGTGCTaGGGAGAGGGCCCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGSLSKC*GEGPSG Trigger: ACCAGATGGGCCCTCTCCCCAGCACTTTGATAAAGA...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR TCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACATCCTCCCGCCAGGGGTaGCCACTGTCCTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTSSRQG*PLSSAT Trigger: GGTTGCAGAGGACAGTGGTCACCCCTGGCGGGAGGA...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACAATCCTGGAAGCCGCCTaGCCCCTGCAGCCCGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTILEAA*PLQPEE Trigger: CTCTTCGGGCTGCAGGGGGCAGGCGGCTTCCAGGAT...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACAAAGCCGCCTGCCCCCTaGAGCCCGAAGAGGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTKPPAP*SPKRFS Trigger: AGAGAACCTCTTCGGGCTGCAGGGGGCAGGCGGCTT...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCCACCACATTTTTCTTaGCTTCTATACCCGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGPPHFS*LLYPSD Trigger: ATCAGACGGGTATAGAAGCCAAGAAAAATGTGGTGG...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACAACCCACAGCAGGACTTaGCACCAGCAGAGGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTTHSRT*HQQRSC Trigger: GCAACTCCTCTGCTGGTGGCAAGTCCTGCTGTGGGT...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACACAAGAAGCCAAGTGTTaGAAACGCCCGGGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTQEAKC*KRPGQG Trigger: TCCCTGCCCCGGGCGTTTCCAACACTTGGCTTCTTG...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR TCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACAGGCAGGGAGTTAAAATaGGGAGCCAGGCTGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTGRELK*GARLAE Trigger: TTCTGCCAGCCTGGCTCCTCATTTTAACTCCCTGCC...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR TCA 90 bp | CCGTTGCAAGTCCACACATTTAGCGACTGTAATGCTAAGTCCACAAAGGAGGGGGCTTCTATACCCGTCTaGTTGAAAATGAAGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: PLQVHTFSDCNAKSTKEGASIPV*LKMKIF Trigger: GAAAATCTTCATTTTCAATCAGACGGGTATAGAAGC...CCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTTGACGACACTAGAAAAGAAAGCAACCTCCTCTTCATaGAGATACACAGCTCCTACC | + |
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Preference number: 4 (lower is better) Translates to: LSSSSETTLSCLTTLEKKATSSS*RYTAPT Trigger: GGTAGGAGCTGTGTATCTGCATGAAGAGGAGGTTGC...TTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CAGTCAATTCTAGTGGACATTTTTGTACCTGCTAGTTGTCATAGGAAAAACACACAGTCTTTATCAAAGTaGTGGGGAGAGGGCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: QSILVDIFVPASCHRKNTQSLSK*WGEGPS Trigger: AGATGGGCCCTCTCCCCAGCACTTTGATAAAGACTG...TGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | CTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTTGACGACACTAGAAAAGAAATTCCTGTTCTTGTCCTaGAATCAGCCACCGAATACT | + |
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Preference number: 4 (lower is better) Translates to: LSSSSETTLSCLTTLEKKFLFLS*NQPPNT Trigger: AGTATTCGGTGGCTGATTCCAGGACAAGAACAGGAA...TTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR TCA 90 bp | CTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTTGACGACACTAGAAAAGAAAGGTTTAGGAAATCCATaGGGTCCTGGGACATATTTA | + |
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Preference number: 4 (lower is better) Translates to: LSSSSETTLSCLTTLEKKGLGNP*GPGTYL Trigger: TAAATATGTCCCAGGACCTCATGGATTTCCTAAACC...TTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR GCA 90 bp | CTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTTGACGACACTAGAAAAGAAATGTATGGTTAAACCTTaGCATTGGTTTAGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSSSSETTLSCLTTLEKKCMVKP*HWFSSL Trigger: CAAGGAGCTAAACCAATGGCAAGGTTTAACCATACA...TTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CCA 90 bp | CTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTTGACGACACTAGAAAAGAAAAAATCCATGAGGTCCTaGGACATATTTAAAATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSSSSETTLSCLTTLEKKKSMRS*DIFKIF Trigger: GAAGATTTTAAATATGTCCCAGGACCTCATGGATTT...TTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| 3UTR CAA 72 bp | CATCTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTaGACGACACTAGAAAAGAAATTCATTATGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: HLSSSSETTLSC*TTLEKKFIMFK Trigger: CTTGAACATAATGAATTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS TCA 90 bp | GTGGGCCTCGGGGCTCCGTTGGTCCTCAGCTGCCCCAGGGACCACTaGCAGCACCACCATGGGATCTCCGCGCGGACCCAGAGAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: VGLGAPLVLSCPRDH*QHHHGISARTQRGL Trigger: GAGGCCTCTCTGGGTCCGCGCGGAGATCCCATGGTGGTGCTGTCAGTGGTCCCTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS GCA 90 bp | TCTCTCGGCCACAGCTCGGGTCCTCCTCTCCCTGCGCACTGCAGGTaGCATCGTGGGCCTCGGGGCTCCGTTGGTCCTCAGCTGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SLGHSSGPPLPAHCR*HRGPRGSVGPQLPQ Trigger: CTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGCGCAGGGAGAGGAGGACCCGAGCTGTGGCCGAGAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 90 bp | CCACAGCTCGGGTCCTCCTCTCCCTGCGCACTGCAGGTGCCATCGTaGGCCTCGGGGCTCCGTTGGTCCTCAGCTGCCCCAGGGACCACT | + |
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Preference number: 5 (lower is better) Translates to: PQLGSSSPCALQVPS*ASGLRWSSAAPGTT Trigger: AGTGGTCCCTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGCGCAGGGAGAGGAGGACCCGAGCTGTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 90 bp | TCCGTTGGTCCTCAGCTGCCCCAGGGACCACTGACAGCACCACCATaGGATCTCCGCGCGGACCCAGAGAGGCCTCCATGGGTTCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: SVGPQLPQGPLTAPP*DLRADPERPPWVPP Trigger: CGGCGGAACCCATGGAGGCCTCTCTGGGTCCGCGCGGAGATCCCATGGTGGTGCTGTCAGTGGTCCCTGGGGCAGCTGAGGACCAACGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 90 bp | TCTCCCTGCGCACTGCAGGTGCCATCGTGGGCCTCGGGGCTCCGTTaGTCCTCAGCTGCCCCAGGGACCACTGACAGCACCACCATGGGA | + |
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Preference number: 5 (lower is better) Translates to: SPCALQVPSWASGLR*SSAAPGTTDSTTMG Trigger: TCCCATGGTGGTGCTGTCAGTGGTCCCTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGCGCAGGGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS GCA 90 bp | ATCTCCGCGCGGACCCAGAGAGGCCTCCATGGGTTCCGCCGCTCTTaGCTGGTCCCGATGGTCCTGAGCAACCTCCTCTTCATGCAGATA | + |
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Preference number: 5 (lower is better) Translates to: ISARTQRGLHGFRRS*LVPMVLSNLLFMQI Trigger: TATCTGCATGAAGAGGAGGTTGCTCAGGACCATCGGGACCAGGCAAGAGCGGCGGAACCCATGGAGGCCTCTCTGGGTCCGCGCGGAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS TCA 90 bp | CTAGCCCAGTCACATTCCTCTCCTCACAATTCACCTTGGGGGACTTaGGGCTGTCAGTGCTGTTGGCATCCTCGGTGGCTACAGGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: LAQSHSSPHNSPWGT*GCQCCWHPRWLQAR Trigger: CCGAGCCTGTAGCCACCGAGGATGCCAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGAATTGTGAGGAGAGGAATGTGACTGGGCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CAA 90 bp | AGCGACTGTAATGCTAAGTCCACAAAGGAGGGGCTGAGACCCCTCTTGTTCCAGCACCCACAGCAGGACTaGCCACCAGCAGAGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SDCNAKSTKEGLRPLLFQHPQQD*PPAEEL Trigger: CAACTCCTCTGCTGGTGGCAAGTCCTGCTGTGGGTG...CTGGAACAAGAGGGGTCTCAGCCCCTCCTTTGTGGACTTAGCATTACAGTCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS GCA 90 bp | AGAACAAGGAAAACACCAGCAACCAATCCACAGTCTTTATCAAAGTaGTGGGGAGAGGGCCCATCTGGTCAGCCTGCGTTACCACCACAT | + |
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Preference number: 5 (lower is better) Translates to: RTRKTPATNPQSLSK*WGEGPSGQPALPPH Trigger: ATGTGGTGGTAACGCAGGCTGACCAGATGGGCCCTCTCCCCAGCACTTTGATAAAGACTGTGGATTGGTTGCTGGTGTTTTCCTTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 90 bp | AACCAATCCACAGTCTTTATCAAAGTGCTGGGGAGAGGGCCCATCTaGTCAGCCTGCGTTACCACCACATTTTTCTTGGCTTCTATACCC | + |
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Preference number: 5 (lower is better) Translates to: NQSTVFIKVLGRGPI*SACVTTTFFLASIP Trigger: GGGTATAGAAGCCAAGAAAAATGTGGTGGTAACGCAGGCTGACCAGATGGGCCCTCTCCCCAGCACTTTGATAAAGACTGTGGATTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 90 bp | ACAAGGAAAACACCAGCAACCAATCCACAGTCTTTATCAAAGTGCTaGGGAGAGGGCCCATCTGGTCAGCCTGCGTTACCACCACATTTT | + |
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Preference number: 5 (lower is better) Translates to: TRKTPATNPQSLSKC*GEGPSGQPALPPHF Trigger: AAAATGTGGTGGTAACGCAGGCTGACCAGATGGGCCCTCTCCCCAGCACTTTGATAAAGACTGTGGATTGGTTGCTGGTGTTTTCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS-3UTR CAA 90 bp | CTTAGCTCCTCTTCTGAGACAACACTTTCCTGTTTGACGACACTAGAAAAGAAATTCACCTTGGGGGACTaGAGGCTGTCAGTGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LSSSSETTLSCLTTLEKKFTLGD*RLSVLL Trigger: CAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGAA...TTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS TCA 72 bp | TGGAGAGCAGGGACAGGCCGCTCCTCCCGCCAGGGGTaGCCACTGTCCTCTGCAACCTCCAGGCCGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WRAGTGRSSRQG*PLSSATSRPWA Trigger: GGCCCACGGCCTGGAGGTTGCAGAGGACAGTGGTCACCCCTGGCGGGAGGAGCGGCCTGTCCCTGCTCTCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS GCA 72 bp | CTCGGCCACAGCTCGGGTCCTCCTCTCCCTGCGCACTaGAGGTGCCATCGTGGGCCTCGGGGCTCCGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LGHSSGPPLPAH*RCHRGPRGSVG Trigger: ACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGCGCAGGGAGAGGAGGACCCGAGCTGTGGCCGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 72 bp | GGGTCCTCCTCTCCCTGCGCACTGCAGGTGCCATCGTaGGCCTCGGGGCTCCGTTGGTCCTCAGCTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSSSPCALQVPS*ASGLRWSSAAP Trigger: TGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGCGCAGGGAGAGGAGGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS TCA 72 bp | GGGGCTCCGTTGGTCCTCAGCTGCCCCAGGGACCACTaGCAGCACCACCATGGGATCTCCGCGCGGACCCAG | + |
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Preference number: 6 (lower is better) Translates to: GAPLVLSCPRDH*QHHHGISARTQ Trigger: CTGGGTCCGCGCGGAGATCCCATGGTGGTGCTGTCAGTGGTCCCTGGGGCAGCTGAGGACCAACGGAGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 72 bp | GCACTGCAGGTGCCATCGTGGGCCTCGGGGCTCCGTTaGTCCTCAGCTGCCCCAGGGACCACTGACAGCACC | + |
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Preference number: 6 (lower is better) Translates to: ALQVPSWASGLR*SSAAPGTTDST Trigger: GGTGCTGTCAGTGGTCCCTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 72 bp | CCATGGGATCTCCGCGCGGACCCAGAGAGGCCTCCATaGGTTCCGCCGCTCTTGCCTGGTCCCGATGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PWDLRADPERPP*VPPLLPGPDGP Trigger: AGGACCATCGGGACCAGGCAAGAGCGGCGGAACCCATGGAGGCCTCTCTGGGTCCGCGCGGAGATCCCATGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 72 bp | CCTCAGCTGCCCCAGGGACCACTGACAGCACCACCATaGGATCTCCGCGCGGACCCAGAGAGGCCTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: PQLPQGPLTAPP*DLRADPERPPW Trigger: CCATGGAGGCCTCTCTGGGTCCGCGCGGAGATCCCATGGTGGTGCTGTCAGTGGTCCCTGGGGCAGCTGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS GCA 72 bp | CGGACCCAGAGAGGCCTCCATGGGTTCCGCCGCTCTTaGCTGGTCCCGATGGTCCTGAGCAACCTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RTQRGLHGFRRS*LVPMVLSNLLF Trigger: GAAGAGGAGGTTGCTCAGGACCATCGGGACCAGGCAAGAGCGGCGGAACCCATGGAGGCCTCTCTGGGTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CAA 72 bp | GCGGACCCAGAGAGGCCTCCATGGGTTCCGCCGCTCTaGCCTGGTCCCGATGGTCCTGAGCAACCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ADPERPPWVPPL*PGPDGPEQPPL Trigger: AAGAGGAGGTTGCTCAGGACCATCGGGACCAGGCAAGAGCGGCGGAACCCATGGAGGCCTCTCTGGGTCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CAA 90 bp | GATCTCCGCGCGGACCCAGAGAGGCCTCCATGGGTTCCGCCGCTCTaGCCTGGTCCCGATGGTCCTGAGCAACCTCCTCTTCATGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: DLRADPERPPWVPPL*PGPDGPEQPPLHAD Trigger: ATCTGCATGAAGAGGAGGTTGCTCAGGACCATCGGGACCAGGCAAGAGCGGCGGAACCCATGGAGGCCTCTCTGGGTCCGCGCGGAGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CAA 90 bp | CTCTCCTCACAATTCACCTTGGGGGACTTGAGGCTGTCAGTGCTGTaGGCATCCTCGGTGGCTACAGGCTCGGCCTCAGTCACGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LSSQFTLGDLRLSVL*ASSVATGSASVTPG Trigger: GCCTGGCGTGACTGAGGCCGAGCCTGTAGCCACCGAGGATGCCAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGAATTGTGAGGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CAA 72 bp | CAATTCACCTTGGGGGACTTGAGGCTGTCAGTGCTGTaGGCATCCTCGGTGGCTACAGGCTCGGCCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: QFTLGDLRLSVL*ASSVATGSASV Trigger: GACTGAGGCCGAGCCTGTAGCCACCGAGGATGCCAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGAATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CAA 90 bp | TCTAGCCCAGTCACATTCCTCTCCTCACAATTCACCTTGGGGGACTaGAGGCTGTCAGTGCTGTTGGCATCCTCGGTGGCTACAGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSPVTFLSSQFTLGD*RLSVLLASSVATGS Trigger: CGAGCCTGTAGCCACCGAGGATGCCAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGAATTGTGAGGAGAGGAATGTGACTGGGCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 72 bp | GTGCTGAGATGCATCCAGAGCCAAGAAGCCAAGTGTTaGAAACGCCCGGGGCAGGGAGTTAAAATGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VLRCIQSQEAKC*KRPGQGVKMRS Trigger: GCTCCTCATTTTAACTCCCTGCCCCGGGCGTTTCCAACACTTGGCTTCTTGGCTCTGGATGCATCTCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CCA 72 bp | ACACCAGCAACCAATCCACAGTCTTTATCAAAGTGCTaGGGAGAGGGCCCATCTGGTCAGCCTGCGTTACCA | + |
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Preference number: 6 (lower is better) Translates to: TPATNPQSLSKC*GEGPSGQPALP Trigger: TGGTAACGCAGGCTGACCAGATGGGCCCTCTCCCCAGCACTTTGATAAAGACTGTGGATTGGTTGCTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CAA 72 bp | TCTAGCCCAGTCACATTCCTCTCCTCACAATTCACCTaGGGGGACTTGAGGCTGTCAGTGCTGTTGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: SSPVTFLSSQFT*GDLRLSVLLAS Trigger: GGATGCCAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGAATTGTGAGGAGAGGAATGTGACTGGGCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS CAA 90 bp | GTGAAGTTTTCTAGCCCAGTCACATTCCTCTCCTCACAATTCACCTaGGGGGACTTGAGGCTGTCAGTGCTGTTGGCATCCTCGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VKFSSPVTFLSSQFT*GDLRLSVLLASSVA Trigger: AGCCACCGAGGATGCCAACAGCACTGACAGCCTCAAGTCCCCCAAGGTGAATTGTGAGGAGAGGAATGTGACTGGGCTAGAAAACTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS GCA 72 bp | ATCAAAGTGCTGGGGAGAGGGCCCATCTGGTCAGCCTaGGTTACCACCACATTTTTCTTGGCTTCTATACCC | + |
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Preference number: 6 (lower is better) Translates to: IKVLGRGPIWSA*VTTTFFLASIP Trigger: GGGTATAGAAGCCAAGAAAAATGTGGTGGTAACGCAGGCTGACCAGATGGGCCCTCTCCCCAGCACTTTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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| CDS GCA 72 bp | AAAACACCAGCAACCAATCCACAGTCTTTATCAAAGTaGTGGGGAGAGGGCCCATCTGGTCAGCCTGCGTTA | + |
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Preference number: 6 (lower is better) Translates to: KTPATNPQSLSK*WGEGPSGQPAL Trigger: TAACGCAGGCTGACCAGATGGGCCCTCTCCCCAGCACTTTGATAAAGACTGTGGATTGGTTGCTGGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021959.11 |
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