Pregenerated sensors for TXNDC12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028567Ensembl transcript IDs: ENSMUST00000030296.9
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTCTTTACATTCAAAGGAATGGATACTTAGGAAAGGGAGCAGATaGGAGTCAGTCGGCCCCGCTGCTGGCTCCACAGAGCAGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: HSLHSKEWILRKGSR*ESVGPAAGSTEQLL Trigger: CAGAAGCTGCTCTGTGGAGCCAGCAGCGGGGCCGACTGACTCTCATCTGCTCCCTTTCCTAAGTATCCATTCCTTTGAATGTAAAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR GCA 90 bp | GGGTTTGCAGACTTGAGAGTTTCTCTAACAGCAACAGGGAAAGCATaGTTCCAGTTGGGGCTGTCTCAGTGCACAGCCATTCTTGACACG | + |
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Preference number: 1 (lower is better) Translates to: GFADLRVSLTATGKA*FQLGLSQCTAILDT Trigger: CGTGTCAAGAATGGCTGTGCACTGAGACAGCCCCAACTGGAAGCATGCTTTCCCTGTTGCTGTTAGAGAAACTCTCAAGTCTGCAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGGGGCTGTCTCAGTGCACAGCCATTCTTGACACGCATTCGTGCAAACGGAGTCGGCCCCGCTGCTaGCTCCACAGAGCAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: QLGLSQCTAILDTHSCKRSRPRC*LHRAAS Trigger: AGAAGCTGCTCTGTGGAGCCAGCAGCGGGGCCGACT...CCGTTTGCACGAATGCGTGTCAAGAATGGCTGTGCACTGAGACAGCCCCAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR-3UTR GCA 90 bp | ATGAGAGTCAGTCGGCCCCGCTGCTGGCTCCACAGAGCAGCTTCTGTCAGTGGCGGATTCGCTCTCTGCTaGTTTTCTTCCAGAACACTC | + |
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Preference number: 2 (lower is better) Translates to: MRVSRPRCWLHRAASVSGGFALC*FSSRTL Trigger: GAGTGTTCTGGAAGAAAAGCAGCAGAGAGCGAATCC...GCCACTGACAGAAGCTGCTCTGTGGAGCCAGCAGCGGGGCCGACTGACTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGAGCTCCTGCCAGTGTAGGTAGAAGCATGGTTTCTGGTGGCTTAGCGGTTTTAGGATTCGCTCTCTaGTGCTTTTCTTCCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: VRAPASVGRSMVSGGLAVLGFAL*CFSSRT Trigger: TGTTCTGGAAGAAAAGCAGCAGAGAGCGAATCCTAA...AACCGCTAAGCCACCAGAAACCATGCTTCTACCTACACTGGCAGGAGCTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR-3UTR CCA 90 bp | GTTCCGGGAGAAGTCCAGGAGGGTTACCAAGACAAAAGGAGAATGCCACCTTTCTTACATTCAAAGGAATaGATACTTAGGAAAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: VPGEVQEGYQDKRRMPPFLHSKE*ILRKGS Trigger: GCTCCCTTTCCTAAGTATCCATTCCTTTGAATGTAA...GAAAGGTGGCATTCTCCTTTTGTCTTGGTAACCCTCCTGGACTTCTCCCGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR CCA 72 bp | ACGCATTCGTGCAAACGGGGATGCCTGAGCAAAGGGTaGGCGGGCGCAGGGGTTCCGGGAGAAGTCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: THSCKRGCLSKG*AGAGVPGEVQE Trigger: CTCCTGGACTTCTCCCGGAACCCCTGCGCCCGCCCACCCTTTGCTCAGGCATCCCCGTTTGCACGAATGCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR GCA 72 bp | ACAGCCATTCTTGACACGCATTCGTGCAAACGGGGATaGCTGAGCAAAGGGTGGGCGGGCGCAGGGGTTCCG | + |
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Preference number: 3 (lower is better) Translates to: TAILDTHSCKRG*LSKGWAGAGVP Trigger: CGGAACCCCTGCGCCCGCCCACCCTTTGCTCAGGCATCCCCGTTTGCACGAATGCGTGTCAAGAATGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR CCA 72 bp | GAAAGGGAGCAGATGAGAGTCAGTCGGCCCCGCTGCTaGCTCCACAGAGCAGCTTCTGTCAGTGGCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: EREQMRVSRPRC*LHRAASVSGLS Trigger: GGAGAGGCCACTGACAGAAGCTGCTCTGTGGAGCCAGCAGCGGGGCCGACTGACTCTCATCTGCTCCCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR GCA 72 bp | CTGTCTCAGTGCACAGCCATTCTTGACACGCATTCGTaGAAACGGGGATGCCTGAGCAAAGGGTGGGCGGGC | + |
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Preference number: 3 (lower is better) Translates to: LSQCTAILDTHS*KRGCLSKGWAG Trigger: GCCCGCCCACCCTTTGCTCAGGCATCCCCGTTTGCACGAATGCGTGTCAAGAATGGCTGTGCACTGAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR TCA 72 bp | CTTCCAGTTGGGGCTGTCTCAGTGCACAGCCATTCTTaGCACGCATTCGTGCAAACGGGGATGCCTGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LPVGAVSVHSHS*HAFVQTGMPEQ Trigger: TTGCTCAGGCATCCCCGTTTGCACGAATGCGTGTCAAGAATGGCTGTGCACTGAGACAGCCCCAACTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR TCA 90 bp | GCCATTCTTGACACGCATTCGTGCAAACGGGGATGCCTGAGCAAAGGGTGGGCGAACCCCCATCAGGGCTaGAGTCTTCATCCCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AILDTHSCKRGCLSKGWANPHQG*SLHPWA Trigger: AGCCCAGGGATGAAGACTTCAGCCCTGATGGGGGTT...CGCCCACCCTTTGCTCAGGCATCCCCGTTTGCACGAATGCGTGTCAAGAATGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR GCA 90 bp | GCTCCTGCCAGTGTAGGTAGAAGCATGGTTTCTGGTGGCTTAGCGGTTCTGGGTCAGCTGCTTCCTTCTTaGCATCTTCCAGAGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: APASVGRSMVSGGLAVLGQLLPS*HLPESS Trigger: GGAGGACTCTGGAAGATGGCAAGAAGGAAGCAGCTG...ACCCAGAACCGCTAAGCCACCAGAAACCATGCTTCTACCTACACTGGCAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CCA 90 bp | GCCATTCTTGACACGCATTCGTGCAAACGGGGATGCCTGAGCAAAGGGTGGGCGCCACACCAAGATTTATaGATGATCACCATCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: AILDTHSCKRGCLSKGWAPHQDL*MITISG Trigger: GCCGCTGATGGTGATCATCCATAAATCTTGGTGTGG...CGCCCACCCTTTGCTCAGGCATCCCCGTTTGCACGAATGCGTGTCAAGAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR GCA 90 bp | TGGGGCTGTCTCAGTGCACAGCCATTCTTGACACGCATTCGTGCAAACGGGGATGATCCAAGAAAAGGATaGGTGGGATATAACCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: WGCLSAQPFLTRIRANGDDPRKG*VGYNPH Trigger: ATGGGGGTTATATCCCACGCATCCTTTTCTTGGATC...ATCCCCGTTTGCACGAATGCGTGTCAAGAATGGCTGTGCACTGAGACAGCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CCA 90 bp | AGAAGCATGGTTTCTGGTGGCTTAGCGGTTCTGGGTGATTCTTTAGGATTCGCTAGCTCAGCAAACAGGTaGCCCCGAAACGAAGCGACA | + |
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Preference number: 4 (lower is better) Translates to: RSMVSGGLAVLGDSLGFASSANR*PRNEAT Trigger: TGTCGCTTCGTTTCGGGGCCACCTGTTTGCTGAGCT...AGCGAATCCTAAAGAATCACCCAGAACCGCTAAGCCACCAGAAACCATGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR TCA 90 bp | TCCAGTTGGGGCTGTCTCAGTGCACAGCCATTCTTGACACGCATTCGTGCAAACCAACTTGCTCAGCACTaGCGTAGAAATACTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SSWGCLSAQPFLTRIRANQLAQH*RRNTCS Trigger: GCTACAAGTATTTCTACGTCAGTGCTGAGCAAGTTG...GTTTGCACGAATGCGTGTCAAGAATGGCTGTGCACTGAGACAGCCCCAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR GCA 90 bp | GCTCCTGCCAGTGTAGGTAGAAGCATGGTTTCTGGTGGCTTAGCGGTTCTGGGTTGGGTTTTAAAGCTTTaGAGGCTCCACACCAAGATT | + |
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Preference number: 4 (lower is better) Translates to: APASVGRSMVSGGLAVLGWVLKL*RLHTKI Trigger: AATCTTGGTGTGGAGCCTGCAAAGCTTTAAAACCCA...ACCCAGAACCGCTAAGCCACCAGAAACCATGCTTCTACCTACACTGGCAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CCA 90 bp | TCCACAGTGAGAGCTCCTGCCAGTGTAGGTAGAAGCATGGTTTCTGGTGGCTTACAAGAAAAGGATGCGTaGGATATAACCCCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: STVRAPASVGRSMVSGGLQEKDA*DITPIR Trigger: CCTGATGGGGGTTATATCCCACGCATCCTTTTCTTG...TAAGCCACCAGAAACCATGCTTCTACCTACACTGGCAGGAGCTCTCACTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR TCA 90 bp | ACTGACATGGAGTTAATCCCCAAGTGGCTCAAAGTTAGTATCAAAGAGTTTCATGAAAGTGTTTCTCTCTaGAGGCGTCGCCCGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TDMELIPKWLKVSIKEFHESVSL*RRRPSA Trigger: GGCTGACGGGCGACGCCTTCAGAGAGAAACACTTTC...ATGAAACTCTTTGATACTAACTTTGAGCCACTTGGGGATTAACTCCATGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| 3UTR CAA 72 bp | CTGCAATTTGTACACTATAGAAAAGATCGTTCTGGTTaGTTTCACTTCAGCTTGAGTACAGTAGGAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LQFVHYRKDRSG*FHFSLSTVGEN Trigger: ATTTTCTCCTACTGTACTCAAGCTGAAGTGAAACAAACCAGAACGATCTTTTCTATAGTGTACAAATTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CAA 90 bp | CAGTTGGGGCTGTCTCAGTGCACAGCCATTCTTGACACGCATTCGTGCAAACGGTCAGCGGCAAGCCACTaGCAGCTGCTTCCTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: QLGLSQCTAILDTHSCKRSAASH*QLLPSC Trigger: GCAAGAAGGAAGCAGCTGCAAGTGGCTTGCCGCTGA...CCGTTTGCACGAATGCGTGTCAAGAATGGCTGTGCACTGAGACAGCCCCAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CAA 90 bp | ATGAGAGTCAGTCGGCCCCGCTGCTGGCTCCACAGAGCAGCTTCTGTCAGTGGCAGCTTCCTTCATCCCTaGAACAACTTGCTCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: MRVSRPRCWLHRAASVSGSFLHP*NNLLST Trigger: AGTGCTGAGCAAGTTGTTCAAGGGATGAAGGAAGCT...GCCACTGACAGAAGCTGCTCTGTGGAGCCAGCAGCGGGGCCGACTGACTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CAA 90 bp | ATGAGAGTCAGTCGGCCCCGCTGCTGGCTCCACAGAGCAGCTTCTGTCAGTGGCTTGGGTTTTAAAGCTTaGCAGGCTCCACACCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: MRVSRPRCWLHRAASVSGLGFKA*QAPHQD Trigger: ATCTTGGTGTGGAGCCTGCAAAGCTTTAAAACCCAA...GCCACTGACAGAAGCTGCTCTGTGGAGCCAGCAGCGGGGCCGACTGACTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS TCA 90 bp | GTGAATGTGATCTCCAAAACCCTTTCCAAGCCCAGTGCGTCCGTCTaGAGAAGTGATGAGGAGCAGGAAACTGAAGCTCAGCAAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: VNVISKTLSKPSASV*RSDEEQETEAQQTG Trigger: ACCTGTTTGCTGAGCTTCAGTTTCCTGCTCCTCATCACTTCTTCAGACGGACGCACTGGGCTTGGAAAGGGTTTTGGAGATCACATTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CAA 90 bp | ATTGGTAACTCCTGCAATTTGTACACTATAGAAAAGATCGTTCTGGTTTGTTTCGCAGCTGCTTCCTTCTaGCCATCTTCCAGAGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: IGNSCNLYTIEKIVLVCFAAASF*PSSRVL Trigger: GAGGACTCTGGAAGATGGCAAGAAGGAAGCAGCTGC...GAAACAAACCAGAACGATCTTTTCTATAGTGTACAAATTGCAGGAGTTACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CAA 90 bp | ACTGACATGGAGTTAATCCCCAAGTGGCTCAAAGTTAGTATCAAAGAGTTTCATATTTCAGGACGCACCTaGCCACTGGGATCCAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: TDMELIPKWLKVSIKEFHISGRT*PLGSKK Trigger: TTTCTTGGATCCCAGTGGCAAGGTGCGTCCTGAAAT...ATGAAACTCTTTGATACTAACTTTGAGCCACTTGGGGATTAACTCCATGTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS-3UTR CAA 90 bp | ATTGGTAACTCCTGCAATTTGTACACTATAGAAAAGATCGTTCTGGTTTGTTTCCATCCCTTGAACAACTaGCTCAGCACTGACGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: IGNSCNLYTIEKIVLVCFHPLNN*LSTDVE Trigger: TTCTACGTCAGTGCTGAGCAAGTTGTTCAAGGGATG...GAAACAAACCAGAACGATCTTTTCTATAGTGTACAAATTGCAGGAGTTACCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS CCA 72 bp | ACGCACCTTGCCACTGGGATCCAAGAAAAGGATGCGTaGGATATAACCCCCATCAGGGCTGAAGTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: THLATGIQEKDA*DITPIRAEVFI Trigger: GATGAAGACTTCAGCCCTGATGGGGGTTATATCCCACGCATCCTTTTCTTGGATCCCAGTGGCAAGGTGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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| CDS CAA 72 bp | GGGTTTCCACTCTCATTGATGATTTCAGGACGCACCTaGCCACTGGGATCCAAGAAAAGGATGCGTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: GFPLSLMISGRT*PLGSKKRMRGI Trigger: TATCCCACGCATCCTTTTCTTGGATCCCAGTGGCAAGGTGCGTCCTGAAATCATCAATGAGAGTGGAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030296.9 |
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