Pregenerated sensors for TXNDC11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022498Ensembl transcript IDs: ENSMUST00000038424.14, ENSMUST00000118362.8, ENSMUST00000118679.2, ENSMUST00000145225.8, ENSMUST00000147884.2, ENSMUST00000155221.8
Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTGCGTGTCAGAAACCTCGGCAGAGTCTGGGGACAGGGCAGCATaGGCTGCTGCTGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: CCVSETSAESGDRAA*AAAAAAKPWESTLG Trigger: GCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCAGCAGCAGCTCATGCTGCCCTGTCCCCAGACTCTGCCGAGGTTTCTGACACGCAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR GCA 90 bp | AACCTCGGCAGAGTCTGGGGACAGGGCAGCATGAGCTGCTGCTGCTaGTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGT | + |
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Preference number: 1 (lower is better) Translates to: NLGRVWGQGSMSCCC*CQALGVNAGLFSHS Trigger: ACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCAGCAGCAGCTCATGCTGCCCTGTCCCCAGACTCTGCCGAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR GCA 90 bp | AGAAACCTCGGCAGAGTCTGGGGACAGGGCAGCATGAGCTGCTGCTaGTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RNLGRVWGQGSMSCC*CCQALGVNAGLFSH Trigger: GTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCAGCAGCAGCTCATGCTGCCCTGTCCCCAGACTCTGCCGAGGTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR TCA 90 bp | CGTGTTACAGCAGGGGGATGCTGCCATCAGCTGAGTATCAGGCAGTaGAGCTGGCAGCTCTGGTGCCAGGGACTGGAGCACAGGTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: RVTAGGCCHQLSIRQ*SWQLWCQGLEHRCL Trigger: GAGGCACCTGTGCTCCAGTCCCTGGCACCAGAGCTGCCAGCTTCACTGCCTGATACTCAGCTGATGGCAGCATCCCCCTGCTGTAACACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR TCA 90 bp | TGTGGCAGCACCACCGTGTTACAGCAGGGGGATGCTGCCATCAGCTaGGTATCAGGCAGTGAAGCTGGCAGCTCTGGTGCCAGGGACTGG | + |
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Preference number: 1 (lower is better) Translates to: CGSTTVLQQGDAAIS*VSGSEAGSSGARDW Trigger: CCAGTCCCTGGCACCAGAGCTGCCAGCTTCACTGCCTGATACTCAGCTGATGGCAGCATCCCCCTGCTGTAACACGGTGGTGCTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR GCA 90 bp | CTCGGCAGAGTCTGGGGACAGGGCAGCATGAGCTGCTGCTGCTGCTaGCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: LGRVWGQGSMSCCCC*QALGVNAGLFSHSK Trigger: TTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCAGCAGCAGCTCATGCTGCCCTGTCCCCAGACTCTGCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR CCA 90 bp | CAGAAAGCCGGCTGGCTGCCTGCTCAATTTCTGCCCTGGCAGCGATaGACTGGCCACACCACGGGGCATAGAAGAACAGCACCACCACCT | + |
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Preference number: 1 (lower is better) Translates to: QKAGWLPAQFLPWQR*TGHTTGHRRTAPPP Trigger: AGGTGGTGGTGCTGTTCTTCTATGCCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
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| 3UTR CCA 90 bp | ACACAGCTCACAGACATTGTGAGTCCTGGAGAGGGCTGGCCCCTGTaGCAGCACCACCGTGTTACAGCAGGGGGATGCTGCCATCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: TQLTDIVSPGEGWPL*QHHRVTAGGCCHQL Trigger: CAGCTGATGGCAGCATCCCCCTGCTGTAACACGGTGGTGCTGCCACAGGGGCCAGCCCTCTCCAGGACTCACAATGTCTGTGAGCTGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR CCA 90 bp | CTGGTTGACACACAGCTCACAGACATTGTGAGTCCTGGAGAGGGCTaGCCCCTGTGGCAGCACCACCGTGTTACAGCAGGGGGATGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LVDTQLTDIVSPGEG*PLWQHHRVTAGGCC Trigger: GCAGCATCCCCCTGCTGTAACACGGTGGTGCTGCCACAGGGGCCAGCCCTCTCCAGGACTCACAATGTCTGTGAGCTGTGTGTCAACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR TCA 90 bp | GTGAGGAGCCACCCTCACAGTCGCCTAGATGGCGCTGACGAAGGTTaGGTGTCCAAGTGTCCTTCCCCCAGGAAAAACGACACGGGAGCG | + |
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Preference number: 1 (lower is better) Translates to: VRSHPHSRLDGADEG*VSKCPSPRKNDTGA Trigger: CGCTCCCGTGTCGTTTTTCCTGGGGGAAGGACACTTGGACACTCAACCTTCGTCAGCGCCATCTAGGCGACTGTGAGGGTGGCTCCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
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| 3UTR TCA 90 bp | CAGAGCGGCTGCCATCTCGAAGAAGCTGCACTGTGGCACACTCACTaGGCTAGGCCTGGTACCACCCACTGTCTGGTTGACACACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: QSGCHLEEAALWHTH*ARPGTTHCLVDTQL Trigger: GAGCTGTGTGTCAACCAGACAGTGGGTGGTACCAGGCCTAGCTCAGTGAGTGTGCCACAGTGCAGCTTCTTCGAGATGGCAGCCGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR CCA 90 bp | ACACCTGATCAGAAAGCCGGCTGGCTGCCTGCTCAATTTCTGCCCTaGCAGCGATGGACTGGCCACACCACGGGGCATAGAAGAACAGCA | + |
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Preference number: 1 (lower is better) Translates to: TPDQKAGWLPAQFLP*QRWTGHTTGHRRTA Trigger: TGCTGTTCTTCTATGCCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATCAGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
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| 3UTR GCA 90 bp | AAACAACACCTGATCAGAAAGCCGGCTGGCTGCCTGCTCAATTTCTaGCCTGGCAGCGATGGACTGGCCACACCACGGGGCATAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: KQHLIRKPAGCLLNF*PGSDGLATPRGIEE Trigger: TTCTTCTATGCCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATCAGGTGTTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
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| 3UTR CCA 90 bp | AGCGGTACCTGTTCTCCTCAATGTGAGGAATGGAGCTCGGGGCAGTaGCCTCACAGCTCTTCTCTAAGGAAGAGAACTCGATGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SGTCSPQCEEWSSGQ*PHSSSLRKRTRWLG Trigger: CCCCAGCCATCGAGTTCTCTTCCTTAGAGAAGAGCTGTGAGGCCACTGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAGGTACCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR CCA 90 bp | GGCCCACTTGAGGAAAGCGGTACCTGTTCTCCTCAATGTGAGGAATaGAGCTCGGGGCAGTGGCCTCACAGCTCTTCTCTAAGGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GPLEESGTCSPQCEE*SSGQWPHSSSLRKR Trigger: TCTCTTCCTTAGAGAAGAGCTGTGAGGCCACTGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAGGTACCGCTTTCCTCAAGTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR TCA 90 bp | GGTCCTTTCTTCAGCTCATTGTTCAACAGCAGACTCTTGCCTCCATaGGGCTGTAGCCATCGGAAGAGGGTCTCCTGGTTTTCTGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GPFFSSLFNSRLLPP*GCSHRKRVSWFSEA Trigger: GGCCTCAGAAAACCAGGAGACCCTCTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTCTGCTGTTGAACAATGAGCTGAAGAAAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR CCA 90 bp | GTGACTCTAGTCCTAGGGCAGCCCAACATCCTCTTCATCCTTCTGTaGACACCGGGATATTTGGTGCACCGGCATACAAGCACACAAAAC | + |
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Preference number: 1 (lower is better) Translates to: VTLVLGQPNILFILL*TPGYLVHRHTSTQN Trigger: GTTTTGTGTGCTTGTATGCCGGTGCACCAAATATCCCGGTGTCCACAGAAGGATGAAGAGGATGTTGGGCTGCCCTAGGACTAGAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR TCA 90 bp | CCACCTGGTCCCCATGACAGTTATTGTATTCCAAGGCCACTTCGGTaGTCTCATCTAGAAGAGGATGTCTCTCGGCTAGGGGATCAAACG | + |
|
Preference number: 1 (lower is better) Translates to: PPGPHDSYCIPRPLR*SHLEEDVSRLGDQT Trigger: CGTTTGATCCCCTAGCCGAGAGACATCCTCTTCTAGATGAGATCACCGAAGTGGCCTTGGAATACAATAACTGTCATGGGGACCAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR GCA 90 bp | AGAGTGCTGGTCCTTTCTTCAGCTCATTGTTCAACAGCAGACTCTTaGCTCCATGAGGCTGTAGCCATCGGAAGAGGGTCTCCTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RVLVLSSAHCSTADS*LHEAVAIGRGSPGF Trigger: AAAACCAGGAGACCCTCTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTCTGCTGTTGAACAATGAGCTGAAGAAAGGACCAGCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR TCA 90 bp | TGCATTCTATGCTGCCCGACACCACATGATAAAAAGTCTGCTCCTTaGGGTAGAAAGAATCCAGAGCGGCTGCCATCTCGAAGAAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: CILCCPTPHDKKSAP*GRKNPERLPSRRSC Trigger: GCAGCTTCTTCGAGATGGCAGCCGCTCTGGATTCTTTCTACCTCAAGGAGCAGACTTTTTATCATGTGGTGTCGGGCAGCATAGAATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR CCA 90 bp | GGCAGCCCAACATCCTCTTCATCCTTCTGTGGACACCGGGATATTTaGTGCACCGGCATACAAGCACACAAAACACCCATACATACGAAA | + |
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Preference number: 1 (lower is better) Translates to: GSPTSSSSFCGHRDI*CTGIQAHKTPIHTK Trigger: TTTCGTATGTATGGGTGTTTTGTGTGCTTGTATGCCGGTGCACCAAATATCCCGGTGTCCACAGAAGGATGAAGAGGATGTTGGGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR TCA 90 bp | ATCAGACTCAACTGTGCTCGGAGCTCAAGGTTGAGCTGGGACTCATaGGATCCCTACCTCAAAGAAGAAAACTCAGATACTGGAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: IRLNCARSSRLSWDS*DPYLKEENSDTGEK Trigger: CTTCTCTCCAGTATCTGAGTTTTCTTCTTTGAGGTAGGGATCTCATGAGTCCCAGCTCAACCTTGAGCTCCGAGCACAGTTGAGTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR TCA 90 bp | CCTGGTGGCCCTGAGACTCATACATTCAACCCCATAGAGCAAGAGTaGGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PGGPETHTFNPIEQE*ARQSKCTSFCFSSF Trigger: AAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACTCTTGCTCTATGGGGTTGAATGTATGAGTCTCAGGGCCACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
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| 3UTR GCA 90 bp | ATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATaGTATAAAAGTTCAGCACAACAAATGGGGCCTGGTGGCCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: ILQCRHWRIRQASST*YKSSAQQMGPGGPE Trigger: CTCAGGGCCACCAGGCCCCATTTGTTGTGCTGAACTTTTATAGCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR GCA 90 bp | AGCATCTACATGGTAGCTCACAATCGCCTGTTCCAGGAGATTCAATaGCTCTTCTGGCCTCTCTGGATACCATACATACATGCAGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SIYMVAHNRLFQEIQ*LFWPLWIPYIHAGK Trigger: TTTGCCTGCATGTATGTATGGTATCCAGAGAGGCCAGAAGAGGCATTGAATCTCCTGGAACAGGCGATTGTGAGCTACCATGTAGATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR CCA 90 bp | TCTATCTCCACTCTCAGTACTGGGTGGCCTGTTGCTTCTCATAGCTaGAGAGAAAGTCTAGCAATGCTGATTGAGACGGGATGTAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SISTLSTGWPVASHS*RESLAMLIETGCRE Trigger: TTCTCTACATCCCGTCTCAATCAGCATTGCTAGACTTTCTCTCCAGCTATGAGAAGCAACAGGCCACCCAGTACTGAGAGTGGAGATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
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| 3UTR TCA 90 bp | TCTCATCTAGAAGAGGATGTCTCTCGGCTAGGGGATCAAACGGTATaGACAGGAAGAGTGCTGGTCCTTTCTTCAGCTCATTGTTCAACA | + |
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Preference number: 1 (lower is better) Translates to: SHLEEDVSRLGDQTV*TGRVLVLSSAHCST Trigger: TGTTGAACAATGAGCTGAAGAAAGGACCAGCACTCTTCCTGTTCATACCGTTTGATCCCCTAGCCGAGAGACATCCTCTTCTAGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR CCA 90 bp | AAATATGTATGCTTTGCTGGCCTAAATTCACAATGTAGAACAGGTTaGCCTCGAACACACTCTACCTGCCTCTGTCTCCCAAGTACTAGG | + |
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Preference number: 1 (lower is better) Translates to: KYVCFAGLNSQCRTG*PRTHSTCLCLPSTR Trigger: CCTAGTACTTGGGAGACAGAGGCAGGTAGAGTGTGTTCGAGGCCAACCTGTTCTACATTGTGAATTTAGGCCAGCAAAGCATACATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR CCA 90 bp | ATGGTAGCTCACAATCGCCTGTTCCAGGAGATTCAATGCCTCTTCTaGCCTCTCTGGATACCATACATACATGCAGGCAAAATACCATAT | + |
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Preference number: 1 (lower is better) Translates to: MVAHNRLFQEIQCLF*PLWIPYIHAGKIPY Trigger: ATATGGTATTTTGCCTGCATGTATGTATGGTATCCAGAGAGGCCAGAAGAGGCATTGAATCTCCTGGAACAGGCGATTGTGAGCTACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR TCA 90 bp | AAACTGACCAACCAACAGATAAAGACAGTTTTTCCATCAGTTGTCTaGAGACTTAACATGAGCTCTGAAGCTGGTGTCACCCCCATGATT | + |
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Preference number: 1 (lower is better) Translates to: KLTNQQIKTVFPSVV*RLNMSSEAGVTPMI Trigger: AATCATGGGGGTGACACCAGCTTCAGAGCTCATGTTAAGTCTTCAGACAACTGATGGAAAAACTGTCTTTATCTGTTGGTTGGTCAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
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| 3UTR TCA 90 bp | TCTCAGAAAACCTGTAAATTCAAAGCAATGTGTAATGAGCTTCTCTaGGCTGAGTATTACTCACAGAATCCAGAGAAACCAATCACCACT | + |
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Preference number: 1 (lower is better) Translates to: SQKTCKFKAMCNELL*AEYYSQNPEKPITT Trigger: AGTGGTGATTGGTTTCTCTGGATTCTGTGAGTAATACTCAGCTCAGAGAAGCTCATTACACATTGCTTTGAATTTACAGGTTTTCTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGTCTTGTTGGTTCTGCAGCTCAGGCCCGTGAAGGCTGTGCTAGTGAGGGAGGGCTGGCCCCTGTaGCAGCACCACCGTGTTACA | + |
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Preference number: 2 (lower is better) Translates to: FRVLLVLQLRPVKAVLVREGWPL*QHHRVT Trigger: TGTAACACGGTGGTGCTGCCACAGGGGCCAGCCCTC...CCTCACTAGCACAGCCTTCACGGGCCTGAGCTGCAGAACCAACAAGACCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR CAA 90 bp | GGTTCTGCAGCTCAGGCCCGTGAAGGCTGTGCTAGTGAGGCCCACTaGAGGAAAGCGGTACCTGTTCTCCTCAATGTGAGGAATGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GSAAQAREGCASEAH*RKAVPVLLNVRNGA Trigger: AGCTCCATTCCTCACATTGAGGAGAACAGGTACCGCTTTCCTCAAGTGGGCCTCACTAGCACAGCCTTCACGGGCCTGAGCTGCAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAACTCCTTCACAGGAGCAGAGCTCGGGGCACCCAGTCTTTCTGCATATAACGGGGCCTGGTGGCCCTaGGACTCATACATTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: ANSFTGAELGAPSLSAYNGAWWP*DSYIQP Trigger: GGGTTGAATGTATGAGTCTCAGGGCCACCAGGCCCC...GTTATATGCAGAAAGACTGGGTGCCCCGAGCTCTGCTCCTGTGAAGGAGTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR TCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCAGGGGACAGGGCAGCATaGGCTGCTGCTGCTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: NHMLGGQRNGLRALTAFPGDRAA*AAAAAA Trigger: GGCAGCAGCAGCAGCAGCTCATGCTGCCCTGTCCCC...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATGCTGCCATCAGCTGAGTATCAGGCAGTGAAGCTGGCAGCTCTGGTGCCACGGAAGAGGGTCTCCTaGTTTTCTGAGGCCCACTTA | + |
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Preference number: 2 (lower is better) Translates to: GMLPSAEYQAVKLAALVPRKRVS*FSEAHL Trigger: TAAGTGGGCCTCAGAAAACCAGGAGACCCTCTTCCG...TGGCACCAGAGCTGCCAGCTTCACTGCCTGATACTCAGCTGATGGCAGCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGGCATGCTCATGGAAGCCAGAAGAGGGCTTCAAATACCCTAGAACTGAAGGTGGCGCACGCCTTTaGTCCCAGCACTTAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: VWACSWKPEEGFKYPRTEGGARL*SQHLGG Trigger: GCCTCCTAAGTGCTGGGATCAAAGGCGTGCGCCACC...TTCAGTTCTAGGGTATTTGAAGCCCTCTTCTGGCTTCCATGAGCATGCCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAACTCCTTCACAGGAGCAGAGCTCGGGGCACCCAGTCTTTCTGCATATAACCTGAGTATCAGGCAGTaGAGCTGGCAGCTCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: ANSFTGAELGAPSLSAYNLSIRQ*SWQLWC Trigger: GCACCAGAGCTGCCAGCTTCACTGCCTGATACTCAG...GTTATATGCAGAAAGACTGGGTGCCCCGAGCTCTGCTCCTGTGAAGGAGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTCTGTGGCACACTCACTaGGCTAGGCCTGGTACCACC | + |
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Preference number: 2 (lower is better) Translates to: SKACHAPGYGPATCSVVALWHTH*ARPGTT Trigger: GGTGGTACCAGGCCTAGCTCAGTGAGTGTGCCACAG...AGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCGCCCGGCGGACAAACTTCTCAATGTAAACAGCACTCATGGGGCCTTTGTAGCCGGCTGGCTGCCTaGTCAATTTCTGCCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSPGGQTSQCKQHSWGLCSRLAA*SISALA Trigger: TGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCT...ACAAAGGCCCCATGAGTGCTGTTTACATTGAGAAGTTTGTCCGCCGGGCGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTGGGGCTGTCAAGACATTCTGTTCAGAGCCAGTAAAGCTTGCCATGCCCAGACTCTTGCCTCCATaGGGCTGTAGCCATCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: MAGAVKTFCSEPVKLAMPRLLPP*GCSHRK Trigger: CTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTCT...GGGCATGGCAAGCTTTACTGGCTCTGAACAGAATGTCTTGACAGCCCCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCAGCATGAGCTGCTGCTaGTGCTGCCAAGCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSSMSCC*CCQALG Trigger: TCCCAGGGCTTGGCAGCAGCAGCAGCAGCTCATGCT...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTACAGCAGGGGGATGCTaGCATCAGCTGAGTATCAGG | + |
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Preference number: 2 (lower is better) Translates to: SKACHAPGYGPATCSVVATAGGC*HQLSIR Trigger: CCTGATACTCAGCTGATGGCAGCATCCCCCTGCTGT...AGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAACTCCTTCACAGGAGCAGAGCTCGGGGCACCCAGTCTTTCTGCATATAACCCCGGGATATGGTCCTaGAACATGCAGTGTAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: ANSFTGAELGAPSLSAYNPGIWS*NMQCSS Trigger: GCTACTACACTGCATGTTGCAGGACCATATCCCGGG...GTTATATGCAGAAAGACTGGGTGCCCCGAGCTCTGCTCCTGTGAAGGAGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTGCCTCTGCCCTCCCCAAAACAACTCAGGAGGTaGGGAATGGGGTCACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: FLFSESLTMQISLPLPSPKQLRR*GMGSLA Trigger: GGCCAGTGACCCCATTCCTCACCTCCTGAGTTGTTT...TGGGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAAGCGGTACCTGTTCTCCTCAATGTGAGGAATGGAGCTCGGGGCAGTGGTCTGCTTTGGAAAGGTaGCAGAAGTTGCCAGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: EESGTCSPQCEEWSSGQWSALER*QKLPVL Trigger: TAAGACTGGCAACTTCTGTCACCTTTCCAAAGCAGA...CCACTGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAGGTACCGCTTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGGTGCCGGGGCCTGGTGGCCCTaGGACTCATACATTCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: QDNLSALLSASAPFNCGAGAWWP*DSYIQP Trigger: GGGTTGAATGTATGAGTCTCAGGGCCACCAGGCCCC...GGCACCACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| 3UTR-3UTR TCA 90 bp | TCATCGCCCGGCGGACAAACTTCTCAATGTAAACAGCACTCATGGGGCCTTTGTTCGAGGAGAAAAAGCTaGCAGGCGGCTTTGCTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SSPGGQTSQCKQHSWGLCSRRKS*QAALLV Trigger: TACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGA...ACAAAGGCCCCATGAGTGCTGTTTACATTGAGAAGTTTGTCCGCCGGGCGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTAAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTAGAATCCAGAGCGGCTaGCATCTCGAAGAAGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SKACHAPGYGPATCSVVARIQSG*HLEEAA Trigger: TGCAGCTTCTTCGAGATGGCAGCCGCTCTGGATTCT...AGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTGCCTCTGCCCTCCCCAGTGTGGGCATGCTCATaGAAGCCAGAAGAGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FLFSESLTMQISLPLPSPVWACS*KPEEGF Trigger: GAAGCCCTCTTCTGGCTTCCATGAGCATGCCCACAC...TGGGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCCCACTTGGCAAGCATTaGCTCTCCCTGCACCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSPLGKH*LSLHLQ Trigger: CTGGAGGTGCAGGGAGAGCCAATGCTTGCCAAGTGG...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCCATAGCTGGGGGCTGTaGAGAGATAGCTGGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSHSWGL*RDSWLL Trigger: GAGCAGCCAGCTATCTCTCCACAGCCCCCAGCTATG...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR CAA 90 bp | GGGCAGCCCAACATCCTCTTCATCCTTCTGTGGACACCGGGATATTaGGTGCACCGGCATACAAGCACACAAAACACCCATACATACGAA | + |
|
Preference number: 2 (lower is better) Translates to: GQPNILFILLWTPGY*VHRHTSTQNTHTYE Trigger: TTCGTATGTATGGGTGTTTTGTGTGCTTGTATGCCGGTGCACCAAATATCCCGGTGTCCACAGAAGGATGAAGAGGATGTTGGGCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CAA 90 bp | TTAGAGCTCAAGTTCCTCTCACTATCACACTCCTCCTTCCTCCACTaGGCAAGCATTGGCTCTCCCTGCACCTCCAGTGATGCTGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: LELKFLSLSHSSFLH*ASIGSPCTSSDAEL Trigger: TAGTTCAGCATCACTGGAGGTGCAGGGAGAGCCAATGCTTGCCAAGTGGAGGAAGGAGGAGTGTGATAGTGAGAGGAACTTGAGCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTACCACCTGGTCCCCATGACAGTTATTGTATTCCAAGGCCACTTCGGTGATGGGGATCAAACGGTATaGACAGGAAGAGTGCTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LYHLVPMTVIVFQGHFGDGDQTV*TGRVLV Trigger: GACCAGCACTCTTCCTGTTCATACCGTTTGATCCCC...ATCACCGAAGTGGCCTTGGAATACAATAACTGTCATGGGGACCAGGTGGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGTTCTTCTGAAGGTCCTGAGTGTGTATGTGTGGGCATaGTCATGGAAGCCAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GEMAQRLRALTVLLKVLSVYVWA*SWKPEE Trigger: CTCTTCTGGCTTCCATGAGCATGCCCACACATACAC...ACTCAGGACCTTCAGAAGAACAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGTTCTTCTGAAGGTCCTGAGTCTAGGATTAAAGGCATaGACTACCCCACCCAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GEMAQRLRALTVLLKVLSLGLKA*TTPPSN Trigger: GTTGCTGGGTGGGGTAGTGCATGCCTTTAATCCTAG...ACTCAGGACCTTCAGAAGAACAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCACCTCCTTCCTCCACTTaGCAAGCATTGGCTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: NHMLGGQRNGLRALTAFPPPSST*QALALP Trigger: AGGGAGAGCCAATGCTTGCCAAGTGGAGGAAGGAGG...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTGAAACCACCTGGTCCCCATaGCAGTTATTGTATTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KACHAPGYGPATCSVVAETTWSP*QLLYSK Trigger: CTTGGAATACAATAACTGTCATGGGGACCAGGTGGT...TTCAGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGGTGCCCTGTTCTCCTCAATGTaGGGAATGGAGCTCGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: QDNLSALLSASAPFNCGALFSSM*GMELGA Trigger: TGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAG...GGCACCACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTAAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTTCTGAAGACTTAACATaGGCTCTGAAGCTGGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SKACHAPGYGPATCSVVASEDLT*ALKLVS Trigger: TGACACCAGCTTCAGAGCTCATGTTAAGTCTTCAGA...AGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGCTGGGGCTGTCAAGACATTCTGTTCAGAGCCAGTAAAGCTTGCCATGCCCGCAAGACAATCTAAGTaGACTTCTTTCTGCTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: MAGAVKTFCSEPVKLAMPARQSK*TSFCFS Trigger: GCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGC...GGGCATGGCAAGCTTTACTGGCTCTGAACAGAATGTCTTGACAGCCCCAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTATGTATATGAATGAGTACATTGTCAATCTTCAGACACACCAGAAGAGGGTACTGCCCTGGCAGCGATaGACTGGCCACACCACGGGG | + |
|
Preference number: 2 (lower is better) Translates to: FMYMNEYIVNLQTHQKRVLPWQR*TGHTTG Trigger: CCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAG...TACCCTCTTCTGGTGTGTCTGAAGATTGACAATGTACTCATTCATATACATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGATTCTTCTTTCACATCAACAATTGTGGCAAACTCCTTCACAGGAGCAGAGCCACCCACTGTCTGGTTaGCACACAGCTCACAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: EILLSHQQLWQTPSQEQSHPLSG*HTAHRH Trigger: ATGTCTGTGAGCTGTGTGTCAACCAGACAGTGGGTG...GCTCTGCTCCTGTGAAGGAGTTTGCCACAATTGTTGATGTGAAAGAAGAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAAAAGGTAGATGTTCAGGGTCTTGTTGGTTCTGCAGCTCAGGCCCGTGAAATGCAGTGTAGTAGCTaGAAGGGCTATAGGAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: IQKVDVQGLVGSAAQAREMQCSS*KGYRRL Trigger: TAACCTCCTATAGCCCTTTCAGCTACTACACTGCAT...TTCACGGGCCTGAGCTGCAGAACCAACAAGACCCTGAACATCTACCTTTTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTGAAAAGTGCACTTCTTTCTaGTTCAGCTCCTTTCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: KACHAPGYGPATCSVVAEKCTSF*FSSFQL Trigger: CAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTT...TTCAGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGTTCTTCTGAAGGTCCTGAGTCTCTTCCAGACAATCTaGGTTAAACTCCTAGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: GEMAQRLRALTVLLKVLSLFQTI*VKLLAS Trigger: AGATGCTAGGAGTTTAACCCAGATTGTCTGGAAGAG...ACTCAGGACCTTCAGAAGAACAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGATTCAATGCCTCTTCTGGCCTCTCTGGATACCATACATACATGCAGGCAAGCTCCTTTCAACTGTaGTGCCATTACTGGCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RRFNASSGLSGYHTYMQASSFQL*CHYWPS Trigger: ACTTGGCCAGTAATGGCACCACAGTTGAAAGGAGCT...TGCCTGCATGTATGTATGGTATCCAGAGAGGCCAGAAGAGGCATTGAATCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCCTCTTTCAGAGGGCCTaGGTTCAGTTTTCAGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSLFQRA*VQFSAS Trigger: AGATGCTGAAAACTGAACCCAGGCCCTCTGAAAGAG...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGTTCTTCTGAAGGTCCTGAGTTATCCTAGTCAACTGTaGGACAAGAACAACATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GEMAQRLRALTVLLKVLSYPSQL*DKNNIC Trigger: ACAGATGTTGTTCTTGTCTCACAGTTGACTAGGATA...ACTCAGGACCTTCAGAAGAACAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTTCTTCAACATGCTATAAAAGTTCAGCACAACAAATGGGGCCTGGTGGCTCTGAAGACTTAACATaGGCTCTGAAGCTGGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QASSTCYKSSAQQMGPGGSEDLT*ALKLVS Trigger: TGACACCAGCTTCAGAGCTCATGTTAAGTCTTCAGA...GCCACCAGGCCCCATTTGTTGTGCTGAACTTTTATAGCATGTTGAAGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCTCTGCTTTGGAAAGGTaGCAGAAGTTGCCAGTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSSALER*QKLPVL Trigger: TAAGACTGGCAACTTCTGTCACCTTTCCAAAGCAGA...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCATGAAGCCTAAATTCTaGAGCCACTCCCAAATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSMKPKF*SHSQIC Trigger: GCAGATTTGGGAGTGGCTTCAGAATTTAGGCTTCAT...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTGCCTCTGCCCTCCCGCCAGGTCCTCATTGTaGAATATTATAAGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: FFCFLRVSLCRSVCLCPPARSSL*NIIRPQ Trigger: CTGTGGCCTTATAATATTGCACAATGAGGACCTGGC...GGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTATAGACAGAAGCTTCTaGTCTATTTCCTGGACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SKACHAPGYGPATCSVVAIDRSF*SISWTN Trigger: GTTTGTCCAGGAAATAGAGCAGAAGCTTCTGTCTAT...AGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCGGACTTAAGGAGCTATaGTCACCCTGTCTTCATAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSGLKEL*SPCLHS Trigger: ACTATGAAGACAGGGTGAGCATAGCTCCTTAAGTCC...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCGTATACAGACAGACATaGAGCAAAACACTCATGCGC | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSVYRQT*SKTLMR Trigger: GCGCATGAGTGTTTTGCTGCATGTCTGTCTGTATAC...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGGAATCCAAAAGGTAGATGTTCAGGGTCTTGTTGGTTCTGCAGCTCAGGCCGAACAGGAAGAGTGCTaGTCCTTTCTTCAGCTCATT | + |
|
Preference number: 2 (lower is better) Translates to: IGIQKVDVQGLVGSAAQAEQEEC*SFLQLI Trigger: AATGAGCTGAAGAAAGGACCAGCACTCTTCCTGTTC...GGCCTGAGCTGCAGAACCAACAAGACCCTGAACATCTACCTTTTGGATTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTGCCTCTGCCCTCCCATTTATGTGTATGTGTaGGCATGCTCATGGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FFCFLRVSLCRSVCLCPPIYVYV*ACSWKP Trigger: TGGCTTCCATGAGCATGCCCACACATACACATAAAT...GGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGAGCCAGGTTCCTTGTaGTTAGCATTTGCTCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SEQDNLSALLSASAPFNCEPGSL*LAFALL Trigger: AAGCAGAGCAAATGCTAATCACAAGGAACCTGGCTC...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGGTGCCGCAAGACAATCTAAGTaGACTTCTTTCTGCTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QDNLSALLSASAPFNCGAARQSK*TSFCFS Trigger: GCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGC...GGCACCACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
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| 3UTR-3UTR GCA 90 bp | GAGATTCTTCTTTCACATCAACAATTGTGGCAAACTCCTTCACAGGAGCAGAGCAATTGCTGCATTCTATaGTGCCCGACACCACATGAT | + |
|
Preference number: 2 (lower is better) Translates to: EILLSHQQLWQTPSQEQSNCCIL*CPTPHD Trigger: ATCATGTGGTGTCGGGCAGCATAGAATGCAGCAATT...GCTCTGCTCCTGTGAAGGAGTTTGCCACAATTGTTGATGTGAAAGAAGAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCGCATTTGCTCTGCTTTaGAAAGGTGACAGAAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: TCILQCRHWRIRQASSTCAFALL*KGDRSC Trigger: GCAACTTCTGTCACCTTTCCAAAGCAGAGCAAATGC...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCATGTTCATTTGGGTGTaGTGGCACACACCTTTAATT | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSMFIWV*WHTPLI Trigger: AATTAAAGGTGTGTGCCACCACACCCAAATGAACAT...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGGTGCCTTTCCATCAGTTGTCTaGAGACTTAACATGAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: QDNLSALLSASAPFNCGAFPSVV*RLNMSS Trigger: AGAGCTCATGTTAAGTCTTCAGACAACTGATGGAAA...GGCACCACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGCAGAGCTCGGGGCACCCAGTCTTTCTGCATATAACCAAAATAAATTGGAATAAAAAGTCTGCTCCTTaGGGTAGAAAGAATCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EQSSGHPVFLHITKINWNKKSAP*GRKNPE Trigger: CTCTGGATTCTTTCTACCTCAAGGAGCAGACTTTTT...ATTCCAATTTATTTTGGTTATATGCAGAAAGACTGGGTGCCCCGAGCTCTGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGCATTTGCTCTGCTTTaGAAAGGTGACAGAAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SEQDNLSALLSASAPFNCAFALL*KGDRSC Trigger: GCAACTTCTGTCACCTTTCCAAAGCAGAGCAAATGC...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| 3UTR-3UTR GCA 90 bp | AACTGCTGGGCAGAGTTAAAACCTCAAGAGGGAGTCTCTCAGAAAACCTGTAAAATAGACAGAAGCTTCTaGTCTATTTCCTGGACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: NCWAELKPQEGVSQKTCKIDRSF*SISWTN Trigger: GTTTGTCCAGGAAATAGAGCAGAAGCTTCTGTCTAT...TTTACAGGTTTTCTGAGAGACTCCCTCTTGAGGTTTTAACTCTGCCCAGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCGATACCATACATACATaGAGGCAAAATACCATATAC | + |
|
Preference number: 2 (lower is better) Translates to: VLTYTNNLTLATNATSQSDTIHT*RQNTIY Trigger: GTATATGGTATTTTGCCTGCATGTATGTATGGTATC...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAATAAATTGGAATCCAAAAGGTAGATGTTCAGGGTCTTGTTGGTTCTGCAGCAGCTCCTTTCAACTGTaGTGCCATTACTGGCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: KINWNPKGRCSGSCWFCSSSFQL*CHYWPS Trigger: ACTTGGCCAGTAATGGCACCACAGTTGAAAGGAGCT...GCTGCAGAACCAACAAGACCCTGAACATCTACCTTTTGGATTCCAATTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR CAA 90 bp | ACTATGCAGATCAGTCTGCCTCTGCCCTCCCCACTGCTTAGAGATTaGTCTTATCTAGATTACTTCTGCTTTATAAATGAGAATAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TMQISLPLPSPLLRD*SYLDYFCFINENKE Trigger: CTCCTTATTCTCATTTATAAAGCAGAAGTAATCTAGATAAGACAAATCTCTAAGCAGTGGGGAGGGCAGAGGCAGACTGATCTGCATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CAA 90 bp | CAGAATAACCAACATTTCATGAGTCCTTTCATGAAGGTGGCTAATTaGAACGTTTCACCTGGACAGACAAAAGGACTAGGACTTAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QNNQHFMSPFMKVAN*NVSPGQTKGLGLKE Trigger: CTCCTTAAGTCCTAGTCCTTTTGTCTGTCCAGGTGAAACGTTCAAATTAGCCACCTTCATGAAAGGACTCATGAAATGTTGGTTATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCAAAGTTAAGATAGACCCTGTTTCAAAGGAGGAAAAACACCAAATCACAATATCCTTTCAACTGTGGTaGCATTACTGGCCAAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: AKVKIDPVSKEEKHQITISFQLW*HYWPSP Trigger: TGGACTTGGCCAGTAATGGCACCACAGTTGAAAGGA...TATTGTGATTTGGTGTTTTTCCTCCTTTGAAACAGGGTCTATCTTAACTTTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR CCA 72 bp | CAGAAAGCCGGCTGGCTGCCTGCTCAATTTCTGCCCTaGCAGCGATGGACTGGCCACACCACGGGGCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: QKAGWLPAQFLP*QRWTGHTTGHR Trigger: TCTATGCCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR TCA 72 bp | CCCACTGTCTGGTTGACACACAGCTCACAGACATTGTaGGTCCTGGAGAGGGCTGGCCCCTGTGGCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PTVWLTHSSQTL*VLERAGPCGST Trigger: GGTGCTGCCACAGGGGCCAGCCCTCTCCAGGACTCACAATGTCTGTGAGCTGTGTGTCAACCAGACAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR CCA 72 bp | GGCTGGCTGCCTGCTCAATTTCTGCCCTGGCAGCGATaGACTGGCCACACCACGGGGCATAGAAGAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GWLPAQFLPWQR*TGHTTGHRRTA Trigger: TGCTGTTCTTCTATGCCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGCAGGCAGCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR CCA 72 bp | TTTCTTGTGTTGCGTGTCAGAAACCTCGGCAGAGTCTaGGGACAGGGCAGCATGAGCTGCTGCTGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLVLRVRNLGRV*GQGSMSCCCCC Trigger: GCAGCAGCAGCAGCAGCTCATGCTGCCCTGTCCCCAGACTCTGCCGAGGTTTCTGACACGCAACACAAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR TCA 72 bp | CACCCTCACAGTCGCCTAGATGGCGCTGACGAAGGTTaGGTGTCCAAGTGTCCTTCCCCCAGGAAAAACGAC | + |
|
Preference number: 3 (lower is better) Translates to: HPHSRLDGADEG*VSKCPSPRKND Trigger: GTCGTTTTTCCTGGGGGAAGGACACTTGGACACTCAACCTTCGTCAGCGCCATCTAGGCGACTGTGAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR TCA 72 bp | TGCCATCTCGAAGAAGCTGCACTGTGGCACACTCACTaGGCTAGGCCTGGTACCACCCACTGTCTGGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CHLEEAALWHTH*ARPGTTHCLVD Trigger: GTCAACCAGACAGTGGGTGGTACCAGGCCTAGCTCAGTGAGTGTGCCACAGTGCAGCTTCTTCGAGATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR GCA 72 bp | TGCCACAAACAACACCTGATCAGAAAGCCGGCTGGCTaGCTGCTCAATTTCTGCCCTGGCAGCGATGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: CHKQHLIRKPAG*LLNFCPGSDGL Trigger: CAGTCCATCGCTGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATCAGGTGTTGTTTGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR CCA 72 bp | GTCCTAGGGCAGCCCAACATCCTCTTCATCCTTCTGTaGACACCGGGATATTTGGTGCACCGGCATACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLGQPNILFILL*TPGYLVHRHTS Trigger: GCTTGTATGCCGGTGCACCAAATATCCCGGTGTCCACAGAAGGATGAAGAGGATGTTGGGCTGCCCTAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CCA 72 bp | GAGGAAAGCGGTACCTGTTCTCCTCAATGTGAGGAATaGAGCTCGGGGCAGTGGCCTCACAGCTCTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: EESGTCSPQCEE*SSGQWPHSSSL Trigger: TAGAGAAGAGCTGTGAGGCCACTGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAGGTACCGCTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTGGGGCTGTCAAGACATTCTGTTCAGAGCCAGTAAAGCTTGCCATGCCCCCACCCACTGTCTGGTaGACACACAGCTCACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: MAGAVKTFCSEPVKLAMPPPTVW*THSSQT Trigger: TGTCTGTGAGCTGTGTGTCAACCAGACAGTGGGTGG...GGGCATGGCAAGCTTTACTGGCTCTGAACAGAATGTCTTGACAGCCCCAGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR GCA 72 bp | AGTCTGCTCCTTGAGGTAGAAAGAATCCAGAGCGGCTaGCATCTCGAAGAAGCTGCACTGTGGCACACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLLLEVERIQSG*HLEEAALWHTH Trigger: GTGAGTGTGCCACAGTGCAGCTTCTTCGAGATGGCAGCCGCTCTGGATTCTTTCTACCTCAAGGAGCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR CCA 72 bp | AGTTCCTCTCACTATCACACTCCTCCTTCCTCCACTTaGCAAGCATTGGCTCTCCCTGCACCTCCAGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SSSHYHTPPSST*QALALPAPPVM Trigger: CATCACTGGAGGTGCAGGGAGAGCCAATGCTTGCCAAGTGGAGGAAGGAGGAGTGTGATAGTGAGAGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR CCA 72 bp | TTATTGCCACAAACAACACCTGATCAGAAAGCCGGCTaGCTGCCTGCTCAATTTCTGCCCTGGCAGCGATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLPQTTPDQKAG*LPAQFLPWQRW Trigger: CCATCGCTGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATCAGGTGTTGTTTGTGGCAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR GCA 72 bp | TCCTCCTTCCTCCACTTGGCAAGCATTGGCTCTCCCTaGACCTCCAGTGATGCTGAACTAACAAGGCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSFLHLASIGSP*TSSDAELTRLL Trigger: CAAAAGCCTTGTTAGTTCAGCATCACTGGAGGTGCAGGGAGAGCCAATGCTTGCCAAGTGGAGGAAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR GCA 72 bp | GGGGACCTGACATCCTCTTACGGCCTAGGCAGGTACTaGACACATGTGGTATACAGACAGACATGCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GDLTSSYGLGRY*THVVYRQTCSK Trigger: TTTGCTGCATGTCTGTCTGTATACCACATGTGTGCAGTACCTGCCTAGGCCGTAAGAGGATGTCAGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR CCA 72 bp | TGTTCTCCTCAATGTGAGGAATGGAGCTCGGGGCAGTaGCCTCACAGCTCTTCTCTAAGGAAGAGAACTCGA | + |
|
Preference number: 3 (lower is better) Translates to: CSPQCEEWSSGQ*PHSSSLRKRTR Trigger: TCGAGTTCTCTTCCTTAGAGAAGAGCTGTGAGGCCACTGCCCCGAGCTCCATTCCTCACATTGAGGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTGAGACGGGATGTAGAGAAGCGGCTTCATCGCCCGGCGGACAAACTTCTGCACTCATGGGGCCTTaGTATTCGATTGGTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LIETGCREAASSPGGQTSALMGP*YSIGPK Trigger: TTTTGGACCAATCGAATACAAAGGCCCCATGAGTGC...AGAAGTTTGTCCGCCGGGCGATGAAGCCGCTTCTCTACATCCCGTCTCAATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACATGGTGCTGAAGCTCTAGTTCCAGGGCATCCAGTGCCCTCTTCTGGCCTCCTATTTAAAAAGGCCTaGACTATAGAGAGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PHGAEALVPGHPVPSSGLLFKKA*TIESSR Trigger: CCTGGAACTCTCTATAGTCAAGGCCTTTTTAAATAG...GAGGCCAGAAGAGGGCACTGGATGCCCTGGAACTAGAGCTTCAGCACCATGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR TCA 72 bp | CCTAGATCAGACTCAACTGTGCTCGGAGCTCAAGGTTaGGCTGGGACTCATGAGATCCCTACCTCAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PRSDSTVLGAQG*AGTHEIPTSKK Trigger: CTTCTTTGAGGTAGGGATCTCATGAGTCCCAGCTCAACCTTGAGCTCCGAGCACAGTTGAGTCTGATCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR TCA 72 bp | TTCAGCTCATTGTTCAACAGCAGACTCTTGCCTCCATaGGGCTGTAGCCATCGGAAGAGGGTCTCCTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FSSLFNSRLLPP*GCSHRKRVSWF Trigger: AAACCAGGAGACCCTCTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTCTGCTGTTGAACAATGAGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR TCA 72 bp | TGCTGCCCGACACCACATGATAAAAAGTCTGCTCCTTaGGGTAGAAAGAATCCAGAGCGGCTGCCATCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: CCPTPHDKKSAP*GRKNPERLPSR Trigger: TCGAGATGGCAGCCGCTCTGGATTCTTTCTACCTCAAGGAGCAGACTTTTTATCATGTGGTGTCGGGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR GCA 72 bp | GTCCTTTCTTCAGCTCATTGTTCAACAGCAGACTCTTaGCTCCATGAGGCTGTAGCCATCGGAAGAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLSSAHCSTADS*LHEAVAIGRGS Trigger: AGACCCTCTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTCTGCTGTTGAACAATGAGCTGAAGAAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGCTGGGCAGAGTTAAAACCTCAAGAGGGAGTCTCTCAGAAAACCTGTAAATCCTCCTTCCTCCACTaGGCAAGCATTGGCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NCWAELKPQEGVSQKTCKSSFLH*ASIGSP Trigger: GGGAGAGCCAATGCTTGCCAAGTGGAGGAAGGAGGA...TTTACAGGTTTTCTGAGAGACTCCCTCTTGAGGTTTTAACTCTGCCCAGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR TCA 72 bp | CCCCATGACAGTTATTGTATTCCAAGGCCACTTCGGTaGTCTCATCTAGAAGAGGATGTCTCTCGGCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PHDSYCIPRPLR*SHLEEDVSRLG Trigger: CCCTAGCCGAGAGACATCCTCTTCTAGATGAGATCACCGAAGTGGCCTTGGAATACAATAACTGTCATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR CCA 72 bp | TGCTTTGCTGGCCTAAATTCACAATGTAGAACAGGTTaGCCTCGAACACACTCTACCTGCCTCTGTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CFAGLNSQCRTG*PRTHSTCLCLP Trigger: TGGGAGACAGAGGCAGGTAGAGTGTGTTCGAGGCCAACCTGTTCTACATTGTGAATTTAGGCCAGCAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CCA 72 bp | ACTCTCAGTACTGGGTGGCCTGTTGCTTCTCATAGCTaGAGAGAAAGTCTAGCAATGCTGATTGAGACGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLSTGWPVASHS*RESLAMLIETG Trigger: TCCCGTCTCAATCAGCATTGCTAGACTTTCTCTCCAGCTATGAGAAGCAACAGGCCACCCAGTACTGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGCCAGAAGAGGGCTTCAAATACCCTAGAACTGAAGGCACAGGCAGCTGTGAAAGCCAGGTCCTCATaGTGCAATATTATAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSQKRASNTLELKAQAAVKARSS*CNIIRP Trigger: TGGCCTTATAATATTGCACAATGAGGACCTGGCTTT...CACAGCTGCCTGTGCCTTCAGTTCTAGGGTATTTGAAGCCCTCTTCTGGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR TCA 72 bp | TCACCACTTTGTCTGGCATGGGAGCCAGGTTCCTTGTaGTTAGCATTTGCTCTGCTTTGGAAAGGTGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SPLCLAWEPGSL*LAFALLWKGDR Trigger: TCTGTCACCTTTCCAAAGCAGAGCAAATGCTAATCACAAGGAACCTGGCTCCCATGCCAGACAAAGTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| 3UTR GCA 72 bp | TCCTCTTCATCCTTCTGTGGACACCGGGATATTTGGTaGACCGGCATACAAGCACACAAAACACCCATACAT | + |
|
Preference number: 3 (lower is better) Translates to: SSSSFCGHRDIW*TGIQAHKTPIH Trigger: ATGTATGGGTGTTTTGTGTGCTTGTATGCCGGTGCACCAAATATCCCGGTGTCCACAGAAGGATGAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR GCA 72 bp | TTTTCTGCATTTCCCCTGGTTCCACCAACAGTTTATTaGCACAAACAACACCTGATCAGAAAGCCGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FSAFPLVPPTVY*HKQHLIRKPAG Trigger: GCCAGCCGGCTTTCTGATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGGAACCAGGGGAAATGCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| 3UTR CCA 72 bp | ACATCCTCTTCATCCTTCTGTGGACACCGGGATATTTaGTGCACCGGCATACAAGCACACAAAACACCCATA | + |
|
Preference number: 3 (lower is better) Translates to: TSSSSFCGHRDI*CTGIQAHKTPI Trigger: TATGGGTGTTTTGTGTGCTTGTATGCCGGTGCACCAAATATCCCGGTGTCCACAGAAGGATGAAGAGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CCA 72 bp | CCCGGCGGACAAACTTCTCAATGTAAACAGCACTCATaGGGCCTTTGTATTCGATTGGTCCAAAACTCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: PGGQTSQCKQHS*GLCIRLVQNSD Trigger: ATCGGAGTTTTGGACCAATCGAATACAAAGGCCCCATGAGTGCTGTTTACATTGAGAAGTTTGTCCGCCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| 3UTR TCA 72 bp | AACTGTGCTCGGAGCTCAAGGTTGAGCTGGGACTCATaGGATCCCTACCTCAAAGAAGAAAACTCAGATACT | + |
|
Preference number: 3 (lower is better) Translates to: NCARSSRLSWDS*DPYLKEENSDT Trigger: AGTATCTGAGTTTTCTTCTTTGAGGTAGGGATCTCATGAGTCCCAGCTCAACCTTGAGCTCCGAGCACAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR GCA 72 bp | TTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTaGCTCTGCCCTCCCCACTGCTTAGAGATTTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FCFLRVSLCRSV*LCPPHCLEICL Trigger: AAGACAAATCTCTAAGCAGTGGGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CCA 72 bp | CTTCTTCAACATGCTATAAAAGTTCAGCACAACAAATaGGGCCTGGTGGCCCTGAGACTCATACATTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: LLQHAIKVQHNK*GLVALRLIHST Trigger: GGTTGAATGTATGAGTCTCAGGGCCACCAGGCCCCATTTGTTGTGCTGAACTTTTATAGCATGTTGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAACACTGCCCTCATCTCAAGTCCCCAAACAACTCAGGAGGTGAGGAATGGAACAGAGATAAGATTTaGCAAGTAGTCTGGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TKHCPHLKSPNNSGGEEWNRDKI*QVVWPF Trigger: AAAAGGCCAGACTACTTGCAAAATCTTATCTCTGTT...CCATTCCTCACCTCCTGAGTTGTTTGGGGACTTGAGATGAGGGCAGTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCAAAACTGCACCAAATTTaGATAGACAGAAGCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NHMLGGQRNGLRALTAFPKLHQI*IDRSFC Trigger: GCAGAAGCTTCTGTCTATCAAAATTTGGTGCAGTTT...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR TCA 72 bp | CCTGAGACTCATACATTCAACCCCATAGAGCAAGAGTaGGCAAGACAATCTAAGTGCACTTCTTTCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PETHTFNPIEQE*ARQSKCTSFCF Trigger: GAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACTCTTGCTCTATGGGGTTGAATGTATGAGTCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| 3UTR TCA 72 bp | GCCCTCTTCTGGCCTCCAAAGGCACTTATAAACAAGTaGCATCAGACTCACAAACATACACACGACAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALFWPPKALINK*HQTHKHTHDKN Trigger: ATTTTTGTCGTGTGTATGTTTGTGAGTCTGATGTCACTTGTTTATAAGTGCCTTTGGAGGCCAGAAGAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CCA 72 bp | ACTTGCTTTAAAACTTACATGTTCATTTGGGTGTGGTaGCACACACCTTTAATTCTAGAGCTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TCFKTYMFIWVW*HTPLILELGRQ Trigger: CTGCCTCCCAAGCTCTAGAATTAAAGGTGTGTGCCACCACACCCAAATGAACATGTAAGTTTTAAAGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR TCA 72 bp | ACTCATAATGTAGAAGCGGGAGATAGGGAGAGTGCGTaGACACTAAAAACATGTCTTTATCATAGCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: THNVEAGDRESA*TLKTCLYHSSA Trigger: TGCTGAGCTATGATAAAGACATGTTTTTAGTGTTCACGCACTCTCCCTATCTCCCGCTTCTACATTATGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR CCA 72 bp | CTGTCCTTAAAATTAGAATCTCAGGGAGCTCTTAACTaGAGTATGAGATCTCCCGAAACTAGAGTTACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLKLESQGALN*SMRSPETRVTV Trigger: GACTGTAACTCTAGTTTCGGGAGATCTCATACTCCAGTTAAGAGCTCCCTGAGATTCTAATTTTAAGGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR TCA 72 bp | AAGGCCATAGAGTTAGGCAGTAGCAGAGTTAAGCTTTaGCTTAAACCTGACATCAGGTTTTTCACTAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KAIELGSSRVKL*LKPDIRFFTSL Trigger: CAAACTAGTGAAAAACCTGATGTCAGGTTTAAGTCAAAGCTTAACTCTGCTACTGCCTAACTCTATGGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CCA 72 bp | CCAATCACCACTTGCTTTAAAACTTACATGTTCATTTaGGTGTGGTGGCACACACCTTTAATTCTAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PITTCFKTYMFI*VWWHTPLILEL Trigger: AAGCTCTAGAATTAAAGGTGTGTGCCACCACACCCAAATGAACATGTAAGTTTTAAAGCAAGTGGTGATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAATAAATTGGAATCCAAAAGGTAGATGTTCAGGGTCTTGTTGGTTCTGCAGCAAACTGCACCAAATTTaGATAGACAGAAGCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KINWNPKGRCSGSCWFCSKLHQI*IDRSFC Trigger: GCAGAAGCTTCTGTCTATCAAAATTTGGTGCAGTTT...GCTGCAGAACCAACAAGACCCTGAACATCTACCTTTTGGATTCCAATTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR TCA 72 bp | ACCTGTAAATTCAAAGCAATGTGTAATGAGCTTCTCTaGGCTGAGTATTACTCACAGAATCCAGAGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: TCKFKAMCNELL*AEYYSQNPEKP Trigger: TGGTTTCTCTGGATTCTGTGAGTAATACTCAGCTCAGAGAAGCTCATTACACATTGCTTTGAATTTACAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | GACACACAGCTCACAGACATTGTGAGTCCTGGAGAGGGCTGGCCCCTGTGGCAGAGGGCTGAGGGAGCCTaGGCCCTTGGGGCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DTQLTDIVSPGEGWPLWQRAEGA*ALGAAT Trigger: GGTGGCGGCCCCAAGGGCTCAGGCTCCCTCAGCCCT...CTGCCACAGGGGCCAGCCCTCTCCAGGACTCACAATGTCTGTGAGCTGTGTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR TCA 90 bp | GGGATGCTGCCATCAGCTGAGTATCAGGCAGTGAAGCTGGCAGCTCTGGTGCCACCGCCCCGGCAGGGCTaGGGGAGCCTGAGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMLPSAEYQAVKLAALVPPPRQG*GSLSPW Trigger: CCAAGGGCTCAGGCTCCCTCAGCCCTGCCGGGGCGG...TGGCACCAGAGCTGCCAGCTTCACTGCCTGATACTCAGCTGATGGCAGCATCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR TCA 90 bp | CTAGCAATGCTGATTGAGACGGGATGTAGAGAAGCGGCTTCATCGCCCGGCGGAAGGGCTGAGGGAGCCTaGGCCCTTGGGGCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAMLIETGCREAASSPGGRAEGA*ALGAAT Trigger: GGTGGCGGCCCCAAGGGCTCAGGCTCCCTCAGCCCT...TCCGCCGGGCGATGAAGCCGCTTCTCTACATCCCGTCTCAATCAGCATTGCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGAGGGCTGAGGGAGCCTaGGCCCTTGGGGCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKRAEGA*ALGAAT Trigger: GGTGGCGGCCCCAAGGGCTCAGGCTCCCTCAGCCCT...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGACCGGAGATCTCGAGGAGAAAAAGCTGACAGGCGGCTTTGCTGGTATTCCGCCCCGGCAGGGCTaGGGGAGCCTGAGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTGDLEEKKLTGGFAGIPPRQG*GSLSPW Trigger: CCAAGGGCTCAGGCTCCCTCAGCCCTGCCGGGGCGG...AATACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGAGATCTCCGGTCCTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| CDS-3UTR TCA 90 bp | CTTCATCGCCCGGCGGACAAACTTCTCAATGTAAACAGCACTCATGGGGCCTTTCCGCCCCGGCAGGGCTaGGGGAGCCTGAGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHRPADKLLNVNSTHGAFPPRQG*GSLSPW Trigger: CCAAGGGCTCAGGCTCCCTCAGCCCTGCCGGGGCGG...AAAGGCCCCATGAGTGCTGTTTACATTGAGAAGTTTGTCCGCCGGGCGATGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| CDS-3UTR TCA 90 bp | CACACTCTACCTGCCTCTGTCTCCCAAGTACTAGGATTAAAGGCATGCACTACCAGGGCTGAGGGAGCCTaGGCCCTTGGGGCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HTLPASVSQVLGLKACTTRAEGA*ALGAAT Trigger: GGTGGCGGCCCCAAGGGCTCAGGCTCCCTCAGCCCT...GGTAGTGCATGCCTTTAATCCTAGTACTTGGGAGACAGAGGCAGGTAGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR TCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCACCGCCCCGGCAGGGCTaGGGGAGCCTGAGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHMLGGQRNGLRALTAFPPPRQG*GSLSPW Trigger: CCAAGGGCTCAGGCTCCCTCAGCCCTGCCGGGGCGG...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTGCCTCTGCCCTCCCCCGCCCCGGCAGGGCTaGGGGAGCCTGAGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FFCFLRVSLCRSVCLCPPPPRQG*GSLSPW Trigger: CCAAGGGCTCAGGCTCCCTCAGCCCTGCCGGGGCGG...GGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGGGGCTGTCAAGACATTCTGTTCAGAGCCAGTAAAGCTTGCCATGCCCCTGCCCTGGCAGCGATaGACTGGCCACACCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MAGAVKTFCSEPVKLAMPLPWQR*TGHTTG Trigger: CCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAG...GGGCATGGCAAGCTTTACTGGCTCTGAACAGAATGTCTTGACAGCCCCAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTGAACCCGCACAGCAGCTCTaGCCGCTGGCGCGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KACHAPGYGPATCSVVAEPAQQL*PLARHK Trigger: CTTATGGCGCGCCAGCGGCCAGAGCTGCTGTGCGGG...TTCAGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGGACCGGAGATCTCGAGGAGAAAAAGCTGACAGGCGGCTTTGCTGGTATTCCCGCACAGCAGCTCTaGCCGCTGGCGCGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTGDLEEKKLTGGFAGIPAQQL*PLARHK Trigger: CTTATGGCGCGCCAGCGGCCAGAGCTGCTGTGCGGG...AATACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGAGATCTCCGGTCCTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGCTGTGGCACACTCACTaGGCTAGGCCTGGTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKLWHTH*ARPGTT Trigger: GGTGGTACCAGGCCTAGCTCAGTGAGTGTGCCACAG...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | GTGTATGTGTGGGCATGCTCATGGAAGCCAGAAGAGGGCTTCAAATACCCTAGACCCGCACAGCAGCTCTaGCCGCTGGCGCGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYVWACSWKPEEGFKYPRPAQQL*PLARHK Trigger: CTTATGGCGCGCCAGCGGCCAGAGCTGCTGTGCGGG...TCTAGGGTATTTGAAGCCCTCTTCTGGCTTCCATGAGCATGCCCACACATACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CAA 72 bp | GCTCAGGCCCGTGAAGGCTGTGCTAGTGAGGCCCACTaGAGGAAAGCGGTACCTGTTCTCCTCAATGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQAREGCASEAH*RKAVPVLLNVR Trigger: CCTCACATTGAGGAGAACAGGTACCGCTTTCCTCAAGTGGGCCTCACTAGCACAGCCTTCACGGGCCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCACTGCCCTGGCAGCGATaGACTGGCCACACCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NHMLGGQRNGLRALTAFPLPWQR*TGHTTG Trigger: CCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAG...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGGCTCAATTTCTGCCCTaGCAGCGATGGACTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKAQFLP*QRWTGH Trigger: GTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGC...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGCCTCAATGTGAGGAATaGAGCTCGGGGCAGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKPQCEE*SSGQWP Trigger: AGGCCACTGCCCCGAGCTCCATTCCTCACATTGAGG...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAAAGCGGTACCTGTTCTCCTCAATGTGAGGAATGGAGCTCGGGGCAGTGGACCAGGAGGCTGGGGTaGACCGCTGAATTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EESGTCSPQCEEWSSGQWTRRLG*TAEFKV Trigger: TACTTTGAATTCAGCGGTTCACCCCAGCCTCCTGGT...CCACTGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAGGTACCGCTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGCTGTTCTCCTCAATGTaGGGAATGGAGCTCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKLFSSM*GMELGA Trigger: TGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAG...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGACAGCAGGGGGATGCTaGCATCAGCTGAGTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKTAGGC*HQLSIR Trigger: CCTGATACTCAGCTGATGGCAGCATCCCCCTGCTGT...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGGTGCCCCCGCACAGCAGCTCTaGCCGCTGGCGCGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDNLSALLSASAPFNCGAPAQQL*PLARHK Trigger: CTTATGGCGCGCCAGCGGCCAGAGCTGCTGTGCGGG...GGCACCACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGCCATGCCCCGGGATATaGTCCTGCAACATGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKPCPGI*SCNMQC Trigger: ACACTGCATGTTGCAGGACCATATCCCGGGGCATGG...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCACCCGCCGCAGGTGCTaGAGGAGGCGCTCTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: TCILQCRHWRIRQASSTCTRRRC*RRRSTT Trigger: GGTGGTAGAGCGCCTCCTTCAGCACCTGCGGCGGGT...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTGAAGCTCAATTTCTGCCCTaGCAGCGATGGACTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KACHAPGYGPATCSVVAEAQFLP*QRWTGH Trigger: GTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGC...TTCAGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCACCACCGTGTTACAGCAGGGGGATGCTGCCATCAGCTGAGTATCAGGCTCCAGGCTCATAGCTaGAGAGAAAGTCTAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: WQHHRVTAGGCCHQLSIRLQAHS*RESLAM Trigger: CATTGCTAGACTTTCTCTCCAGCTATGAGCCTGGAG...CCTGATACTCAGCTGATGGCAGCATCCCCCTGCTGTAACACGGTGGTGCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR CAA 72 bp | GCCTCTGCACACTCCACTAGAAAGGCTCTCACCACTTaGTCTGGCATGGGAGCCAGGTTCCTTGTGATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASAHSTRKALTT*SGMGARFLVIS Trigger: GCTAATCACAAGGAACCTGGCTCCCATGCCAGACAAAGTGGTGAGAGCCTTTCTAGTGGAGTGTGCAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118362.8 ENSMUST00000145225.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTAGCCAGCTGTCCTTAAAATTAGAATCTCAGGGAGCTCTTAACTGGAGTCTGCCCTGGCAGCGATaGACTGGCCACACCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSQLSLKLESQGALNWSLPWQR*TGHTTG Trigger: CCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAG...ACTCCAGTTAAGAGCTCCCTGAGATTCTAATTTTAAGGACAGCTGGCTAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CCA 90 bp | CACACTCTACCTGCCTCTGTCTCCCAAGTACTAGGATTAAAGGCATGCACTACCGCTCAATTTCTGCCCTaGCAGCGATGGACTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTLPASVSQVLGLKACTTAQFLP*QRWTGH Trigger: GTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGC...GGTAGTGCATGCCTTTAATCCTAGTACTTGGGAGACAGAGGCAGGTAGAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CAA 72 bp | AAGTTCCTCTCACTATCACACTCCTCCTTCCTCCACTaGGCAAGCATTGGCTCTCCCTGCACCTCCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KFLSLSHSSFLH*ASIGSPCTSSD Trigger: ATCACTGGAGGTGCAGGGAGAGCCAATGCTTGCCAAGTGGAGGAAGGAGGAGTGTGATAGTGAGAGGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAAGGGCTGAGGGAGCCTaGGCCCTTGGGGCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKRAEGA*ALGAAT Trigger: GGTGGCGGCCCCAAGGGCTCAGGCTCCCTCAGCCCT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCCGCCCCGGCAGGGCTaGGGGAGCCTGAGCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLPPRQG*GSLSPW Trigger: CCAAGGGCTCAGGCTCCCTCAGCCCTGCCGGGGCGG...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCAGCTCACAGACATTGTaGGTCCTGGAGAGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTYTNNLTLATNATSQSSSQTL*VLERAG Trigger: GCCAGCCCTCTCCAGGACTCACAATGTCTGTGAGCT...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | CACACTCTACCTGCCTCTGTCTCCCAAGTACTAGGATTAAAGGCATGCACTACCAGAAAGCCGGCTGGCTaGCTGCTCAATTTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTLPASVSQVLGLKACTTRKPAG*LLNFCP Trigger: AGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCT...GGTAGTGCATGCCTTTAATCCTAGTACTTGGGAGACAGAGGCAGGTAGAGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTGATCAGAAAGCCGGCTaGCTGCCTGCTCAATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKACHAPGYGPATCSVVADQKAG*LPAQFL Trigger: CAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATC...AGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGGGGATCAAACGGTATGAACAGGAAGAGTGCTGGTCCTTTCTTCAGCTCATCGAGGAGAAAAAGCTaGCAGGCGGCTTTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARGSNGMNRKSAGPFFSSSRRKS*QAALLV Trigger: TACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGA...TGAGCTGAAGAAAGGACCAGCACTCTTCCTGTTCATACCGTTTGATCCCCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGGGGCTGTCAAGACATTCTGTTCAGAGCCAGTAAAGCTTGCCATGCCCGCTGACAGGCGGCTTTaGTGGTATTATCACGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MAGAVKTFCSEPVKLAMPADRRL*WYYHVF Trigger: AAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGC...GGGCATGGCAAGCTTTACTGGCTCTGAACAGAATGTCTTGACAGCCCCAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCAGAAAGCCGGCTGGCTaGCTGCTCAATTTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLTYTNNLTLATNATSQSRKPAG*LLNFCP Trigger: AGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCT...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACGGCGCAGCAGGCGGTaGCCATCCCTGCGGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQRRSRR*PSLRAL Trigger: TAGTGCCCGCAGGGATGGGCACCGCCTGCTGCGCCG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | ACAAAACACTGCCCTCATCTCAAGTCCCCAAACAACTCAGGAGGTGAGGAATGGGATCAGAAAGCCGGCTaGCTGCCTGCTCAATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKHCPHLKSPNNSGGEEWDQKAG*LPAQFL Trigger: CAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATC...CCATTCCTCACCTCCTGAGTTGTTTGGGGACTTGAGATGAGGGCAGTGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR TCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCATCGAGGAGAAAAAGCTaGCAGGCGGCTTTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NHMLGGQRNGLRALTAFPSRRKS*QAALLV Trigger: TACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGA...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCAACCAGGAGGCTGGGGTaGACCGCTGAATTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NHMLGGQRNGLRALTAFPTRRLG*TAEFKV Trigger: TACTTTGAATTCAGCGGTTCACCCCAGCCTCCTGGT...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAACCCGCCGCAGGTGCTaGAGGAGGCGCTCTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQTRRRC*RRRSTT Trigger: GGTGGTAGAGCGCCTCCTTCAGCACCTGCGGCGGGT...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | GACTCTTGCCTCCATGAGGCTGTAGCCATCGGAAGAGGGTCTCCTGGTTTTCTGCCACCAACAGTTTATTaGCACAAACAACACCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: DSCLHEAVAIGRGSPGFLPPTVY*HKQHLI Trigger: GATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGG...CAGAAAACCAGGAGACCCTCTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACCCGCACAGCAGCTCTaGCCGCTGGCGCGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKPAQQL*PLARHK Trigger: CTTATGGCGCGCCAGCGGCCAGAGCTGCTGTGCGGG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACTGCCCTGGCAGCGATaGACTGGCCACACCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQLPWQR*TGHTTG Trigger: CCCCGTGGTGTGGCCAGTCCATCGCTGCCAGGGCAG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCGATCAGAAAGCCGGCTaGCTGCCTGCTCAATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLTYTNNLTLATNATSQSDQKAG*LPAQFL Trigger: CAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATC...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGTGTAAACAGCACTCATaGGGCCTTTGTATTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: CCCQALGVNAGLFSHSKKCKQHS*GLCIRL Trigger: CAATCGAATACAAAGGCCCCATGAGTGCTGTTTACA...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AACTGCTGGGCAGAGTTAAAACCTCAAGAGGGAGTCTCTCAGAAAACCTGTAAAAGACTCTTGCCTCCATaGGGCTGTAGCCATCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NCWAELKPQEGVSQKTCKRLLPP*GCSHRK Trigger: CTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTCT...TTTACAGGTTTTCTGAGAGACTCCCTCTTGAGGTTTTAACTCTGCCCAGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | GAGATTCTTCTTTCACATCAACAATTGTGGCAAACTCCTTCACAGGAGCAGAGCAGAAAGCCGGCTGGCTaGCTGCTCAATTTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EILLSHQQLWQTPSQEQSRKPAG*LLNFCP Trigger: AGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCT...GCTCTGCTCCTGTGAAGGAGTTTGCCACAATTGTTGATGTGAAAGAAGAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGGGGCTGTCAAGACATTCTGTTCAGAGCCAGTAAAGCTTGCCATGCCCCCTTTCTTTAACGAATaGAGTGCTGAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MAGAVKTFCSEPVKLAMPPFFNE*SAEVKK Trigger: CTTCTTCACCTCAGCACTGCATTCGTTAAAGAAAGG...GGGCATGGCAAGCTTTACTGGCTCTGAACAGAATGTCTTGACAGCCCCAGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| 3UTR CAA 72 bp | AACATCCTCTTCATCCTTCTGTGGACACCGGGATATTaGGTGCACCGGCATACAAGCACACAAAACACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NILFILLWTPGY*VHRHTSTQNTH Trigger: ATGGGTGTTTTGTGTGCTTGTATGCCGGTGCACCAAATATCCCGGTGTCCACAGAAGGATGAAGAGGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CAA 72 bp | GTTTTCTGCATTTCCCCTGGTTCCACCAACAGTTTATaGCCACAAACAACACCTGATCAGAAAGCCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFCISPGSTNSL*PQTTPDQKAGW Trigger: CCAGCCGGCTTTCTGATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGGAACCAGGGGAAATGCAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| CDS-3UTR TCA 90 bp | AACTGCTGGGCAGAGTTAAAACCTCAAGAGGGAGTCTCTCAGAAAACCTGTAAAGGGGATCAAACGGTATaGACAGGAAGAGTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NCWAELKPQEGVSQKTCKGDQTV*TGRVLV Trigger: GACCAGCACTCTTCCTGTTCATACCGTTTGATCCCC...TTTACAGGTTTTCTGAGAGACTCCCTCTTGAGGTTTTAACTCTGCCCAGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AACTGCTGGGCAGAGTTAAAACCTCAAGAGGGAGTCTCTCAGAAAACCTGTAAACACCCACTGTCTGGTTaGCACACAGCTCACAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: NCWAELKPQEGVSQKTCKHPLSG*HTAHRH Trigger: ATGTCTGTGAGCTGTGTGTCAACCAGACAGTGGGTG...TTTACAGGTTTTCTGAGAGACTCCCTCTTGAGGTTTTAACTCTGCCCAGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCGCTGACAGGCGGCTTTaGTGGTATTATCACGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLTYTNNLTLATNATSQSADRRL*WYYHVF Trigger: AAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGC...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCCCCGGGATATGGTCCTaGAACATGCAGTGTAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCILQCRHWRIRQASSTCPGIWS*NMQCSS Trigger: GCTACTACACTGCATGTTGCAGGACCATATCCCGGG...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAGAGGGCTGGCCCCTGTaGCAGCACCACCGTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQEGWPL*QHHRVT Trigger: TGTAACACGGTGGTGCTGCCACAGGGGCCAGCCCTC...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | GCCAAAGTTAAGATAGACCCTGTTTCAAAGGAGGAAAAACACCAAATCACAATAGAGGGCTGGCCCCTGTaGCAGCACCACCGTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AKVKIDPVSKEEKHQITIEGWPL*QHHRVT Trigger: TGTAACACGGTGGTGCTGCCACAGGGGCCAGCCCTC...TATTGTGATTTGGTGTTTTTCCTCCTTTGAAACAGGGTCTATCTTAACTTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCTGATGCCAGGGTCCTaGGGGGCAGAGGCAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLLMPGS*GAEAAS Trigger: AGACGCTGCCTCTGCCCCCCAGGACCCTGGCATCAG...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAGTGGAGCTGGTGGTaGAGGGCGGAGGGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQKWSWW*RAEGCH Trigger: GTGACACCCCTCCGCCCTCCACCACCAGCTCCACTT...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACCAAAGTGGAGCTGGTaGTGGAGGGCGGAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQPKWSW*WRAEGC Trigger: ACACCCCTCCGCCCTCCACCACCAGCTCCACTTTGG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAGCCAAAGTGGAGCTaGTGGTGGAGGGCGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQKPKWS*WWRAEG Trigger: CCCCTCCGCCCTCCACCACCAGCTCCACTTTGGCTT...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | GTGTATGTGTGGGCATGCTCATGGAAGCCAGAAGAGGGCTTCAAATACCCTAGACAGGTACCTCATAGCTaGAGAGAAAGTCTAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VYVWACSWKPEEGFKYPRQVPHS*RESLAM Trigger: CATTGCTAGACTTTCTCTCCAGCTATGAGGTACCTG...TCTAGGGTATTTGAAGCCCTCTTCTGGCTTCCATGAGCATGCCCACACATACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR TCA 90 bp | TCACTTAGCCAGCTGTCCTTAAAATTAGAATCTCAGGGAGCTCTTAACTGGAGTTCGAGGAGAAAAAGCTaGCAGGCGGCTTTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLSQLSLKLESQGALNWSSRRKS*QAALLV Trigger: TACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGA...ACTCCAGTTAAGAGCTCCCTGAGATTCTAATTTTAAGGACAGCTGGCTAAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR TCA 90 bp | CAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGGTGCCACCACCTGGTCCCCATaGCAGTTATTGTATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDNLSALLSASAPFNCGATTWSP*QLLYSK Trigger: CTTGGAATACAATAACTGTCATGGGGACCAGGTGGT...GGCACCACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACTGTGGCACACTCACTaGGCTAGGCCTGGTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKLWHTH*ARPGTT Trigger: GGTGGTACCAGGCCTAGCTCAGTGAGTGTGCCACAG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | GTCTTAACTTACACCAACAATCTCACCCTTGCCACCAATGCCACATCTCAGAGCATGCAGTGTAGTAGCTaGAAGGGCTATAGGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLTYTNNLTLATNATSQSMQCSS*KGYRRL Trigger: TAACCTCCTATAGCCCTTTCAGCTACTACACTGCAT...GCTCTGAGATGTGGCATTGGTGGCAAGGGTGAGATTGTTGGTGTAAGTTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAAGCCGGCTGGCTGCCTaGTCAATTTCTGCCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKSRLAA*SISALA Trigger: TGCCAGGGCAGAAATTGAGCAGGCAGCCAGCCGGCT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTGCCTCTGCCCTCCCCACCACCAACAGTTTATTaGCACAAACAACACCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSESLTMQISLPLPSPPPTVY*HKQHLI Trigger: GATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGG...TGGGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTAGAATCCAGAGCGGCTaGCATCTCGAAGAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEQDNLSALLSASAPFNCRIQSG*HLEEAA Trigger: TGCAGCTTCTTCGAGATGGCAGCCGCTCTGGATTCT...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTCTTCAACATGCTATAAAAGTTCAGCACAACAAATGGGGCCTGGTGGCAATTGCTGCATTCTATaGTGCCCGACACCACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: QASSTCYKSSAQQMGPGGNCCIL*CPTPHD Trigger: ATCATGTGGTGTCGGGCAGCATAGAATGCAGCAATT...GCCACCAGGCCCCATTTGTTGTGCTGAACTTTTATAGCATGTTGAAGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTTTTCTGAGAGTCTCACTATGCAGATCAGTCTGCCTCTGCCCTCCCCATGTAAACAGCACTCATaGGGCCTTTGTATTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSESLTMQISLPLPSPCKQHS*GLCIRL Trigger: CAATCGAATACAAAGGCCCCATGAGTGCTGTTTACA...TGGGGAGGGCAGAGGCAGACTGATCTGCATAGTGAGACTCTCAGAAAACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTCGGAAGAGGGTCTCCTaGTTTTCTGAGGCCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SEQDNLSALLSASAPFNCRKRVS*FSEAHL Trigger: TAAGTGGGCCTCAGAAAACCAGGAGACCCTCTTCCG...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCAGAACAGGAAGAGTGCTaGTCCTTTCTTCAGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NHMLGGQRNGLRALTAFPEQEEC*SFLQLI Trigger: AATGAGCTGAAGAAAGGACCAGCACTCTTCCTGTTC...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAATGCAGTTTCTGGCTGTaGCGCCGGAGTAGCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKCSFWL*RRSSLC Trigger: GCACAGGCTACTCCGGCGCCACAGCCAGAAACTGCA...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACTGAGTATCAGGCAGTaGAGCTGGCAGCTCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKLSIRQ*SWQLWC Trigger: GCACCAGAGCTGCCAGCTTCACTGCCTGATACTCAG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | GCCAAAGTTAAGATAGACCCTGTTTCAAAGGAGGAAAAACACCAAATCACAATACTGAGTATCAGGCAGTaGAGCTGGCAGCTCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKVKIDPVSKEEKHQITILSIRQ*SWQLWC Trigger: GCACCAGAGCTGCCAGCTTCACTGCCTGATACTCAG...TATTGTGATTTGGTGTTTTTCCTCCTTTGAAACAGGGTCTATCTTAACTTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAGCTCACAGACATTGTaGGTCCTGGAGAGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQSSQTL*VLERAG Trigger: GCCAGCCCTCTCCAGGACTCACAATGTCTGTGAGCT...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCACCACCAACAGTTTATTaGCACAAACAACACCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NHMLGGQRNGLRALTAFPPPTVY*HKQHLI Trigger: GATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGG...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAGCTGCAGCACTGCCTTaGTCTGGACACAGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKAAALP*SGHSLG Trigger: CCCAAGACTGTGTCCAGAGCAAGGCAGTGCTGCAGC...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCCTCCAGGCTCATAGCTaGAGAGAAAGTCTAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TCILQCRHWRIRQASSTCLQAHS*RESLAM Trigger: CATTGCTAGACTTTCTCTCCAGCTATGAGCCTGGAG...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACCTCAATGTGAGGAATaGAGCTCGGGGCAGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKPQCEE*SSGQWP Trigger: AGGCCACTGCCCCGAGCTCCATTCCTCACATTGAGG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | CAGGCTTCTTCAACATGCTATAAAAGTTCAGCACAACAAATGGGGCCTGGTGGCTCACATCAACAATTGTaGCAAACTCCTTCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QASSTCYKSSAQQMGPGGSHQQL*QTPSQE Trigger: CTCCTGTGAAGGAGTTTGCCACAATTGTTGATGTGA...GCCACCAGGCCCCATTTGTTGTGCTGAACTTTTATAGCATGTTGAAGAAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAATCTCTGAAGCCAAAGTaGAGCTGGTGGTGGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQSLKPK*SWWWRA Trigger: CGCCCTCCACCACCAGCTCCACTTTGGCTTCAGAGA...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAAGACTCTTGCCTCCATaGGGCTGTAGCCATCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKRLLPP*GCSHRK Trigger: CTTCCGATGGCTACAGCCTCATGGAGGCAAGAGTCT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACTGTTCTCCTCAATGTaGGGAATGGAGCTCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKLFSSM*GMELGA Trigger: TGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTGAGGCAGCGTCTGAGTaGTGCAGAATGAACCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLEAASE*CRMNRS Trigger: GCTGCGGTTCATTCTGCATCACTCAGACGCTGCCTC...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTGGCAGAGGCAGCGTCTaGGTGATGCAGAATGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLGRGSV*VMQNEP Trigger: CGGTTCATTCTGCATCACTCAGACGCTGCCTCTGCC...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | TCACTTAGCCAGCTGTCCTTAAAATTAGAATCTCAGGGAGCTCTTAACTGGAGTGCTGACAGGCGGCTTTaGTGGTATTATCACGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSQLSLKLESQGALNWSADRRL*WYYHVF Trigger: AAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGC...ACTCCAGTTAAGAGCTCCCTGAGATTCTAATTTTAAGGACAGCTGGCTAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR GCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAAGAAAGCCGGCTGGCTaGCTGCTCAATTTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKRKPAG*LLNFCP Trigger: AGGGCAGAAATTGAGCAGGCAGCCAGCCGGCTTTCT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AACTGCTGGGCAGAGTTAAAACCTCAAGAGGGAGTCTCTCAGAAAACCTGTAAATACACACTTCCAGAGTaGACTAAGGATACCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NCWAELKPQEGVSQKTCKYTLPE*TKDTSL Trigger: GAGACTGGTATCCTTAGTGCACTCTGGAAGTGTGTA...TTTACAGGTTTTCTGAGAGACTCCCTCTTGAGGTTTTAACTCTGCCCAGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCTGCTGCATTCTATGCTaGCCGACACCACATGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TCILQCRHWRIRQASSTCCCILC*PTPHDK Trigger: TTTATCATGTGGTGTCGGGCAGCATAGAATGCAGCA...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTTTCGCGCTGCAGCACTaGCTTGCTCTGGACACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLFALQH*LALDTV Trigger: GACTGTGTCCAGAGCAAGGCAGTGCTGCAGCGCGAA...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTGCTCAATTTCTGCCCTaGCAGCGATGGACTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLAQFLP*QRWTGH Trigger: GTGGCCAGTCCATCGCTGCCAGGGCAGAAATTGAGC...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACCATGCCCCGGGATATaGTCCTGCAACATGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKPCPGI*SCNMQC Trigger: ACACTGCATGTTGCAGGACCATATCCCGGGGCATGG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCTTTCCCAGAGGGGCTaGTTCCTTAGCCCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLLSQRG*FLSPTL Trigger: CAAGGTGGGGCTAAGGAACCAGCCCCTCTGGGAAAG...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | TCACTTAGCCAGCTGTCCTTAAAATTAGAATCTCAGGGAGCTCTTAACTGGAGTGCAAGTGAAAAGCCTTaGGAGCAGGCGATAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSQLSLKLESQGALNWSASEKP*EQAIRK Trigger: CTTTCTTATCGCCTGCTCCCAAGGCTTTTCACTTGC...ACTCCAGTTAAGAGCTCCCTGAGATTCTAATTTTAAGGACAGCTGGCTAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR TCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAATCGAGGAGAAAAAGCTaGCAGGCGGCTTTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQSRRKS*QAALLV Trigger: TACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGA...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAACCAGGAGGCTGGGGTaGACCGCTGAATTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKTRRLG*TAEFKV Trigger: TACTTTGAATTCAGCGGTTCACCCCAGCCTCCTGGT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTCCTGGGGAAGACAAGTaGTGTGTTGAAATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SEQDNLSALLSASAPFNCPGEDK*CVEMSM Trigger: CATAGACATTTCAACACATCACTTGTCTTCCCCAGG...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAGGGGATCAAACGGTATaGACAGGAAGAGTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQGDQTV*TGRVLV Trigger: GACCAGCACTCTTCCTGTTCATACCGTTTGATCCCC...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACACCCACTGTCTGGTTaGCACACAGCTCACAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQHPLSG*HTAHRH Trigger: ATGTCTGTGAGCTGTGTGTCAACCAGACAGTGGGTG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTACAGCAGGGGGATGCTaGCATCAGCTGAGTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLTAGGC*HQLSIR Trigger: CCTGATACTCAGCTGATGGCAGCATCCCCCTGCTGT...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAGAATCCAGAGCGGCTaGCATCTCGAAGAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQRIQSG*HLEEAA Trigger: TGCAGCTTCTTCGAGATGGCAGCCGCTCTGGATTCT...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACCCGGGATATGGTCCTaGAACATGCAGTGTAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQPGIWS*NMQCSS Trigger: GCTACTACACTGCATGTTGCAGGACCATATCCCGGG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAGATCAGAAAGCCGGCTaGCTGCCTGCTCAATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKDQKAG*LPAQFL Trigger: CAGAAATTGAGCAGGCAGCCAGCCGGCTTTCTGATC...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | GAGATTCTTCTTTCACATCAACAATTGTGGCAAACTCCTTCACAGGAGCAGAGCTGTAAACAGCACTCATaGGGCCTTTGTATTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: EILLSHQQLWQTPSQEQSCKQHS*GLCIRL Trigger: CAATCGAATACAAAGGCCCCATGAGTGCTGTTTACA...GCTCTGCTCCTGTGAAGGAGTTTGCCACAATTGTTGATGTGAAAGAAGAATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTAAAAAGTCTGCTCCTTaGGGTAGAAAGAATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEQDNLSALLSASAPFNCKKSAP*GRKNPE Trigger: CTCTGGATTCTTTCTACCTCAAGGAGCAGACTTTTT...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACAGAATCACTTCCAGTaGGATGCCTTTTCAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQQNHFQ*DAFSRG Trigger: GCCCCTTGAAAAGGCATCTCACTGGAAGTGATTCTG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCGGAAGAGGGTCTCCTaGTTTTCTGAGGCCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLRKRVS*FSEAHL Trigger: TAAGTGGGCCTCAGAAAACCAGGAGACCCTCTTCCG...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAACTGAGTTGTACCCATaGACTTGGAGTGGTTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQTELYP*TWSGSV Trigger: GACCGAACCACTCCAAGTCCATGGGTACAACTCAGT...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| 3UTR CAA 72 bp | ATCAGTCTGCCTCTGCCCTCCCCACTGCTTAGAGATTaGTCTTATCTAGATTACTTCTGCTTTATAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLPSPLLRD*SYLDYFCFINE Trigger: CTCATTTATAAAGCAGAAGTAATCTAGATAAGACAAATCTCTAAGCAGTGGGGAGGGCAGAGGCAGACTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| 3UTR CAA 72 bp | CAACATTTCATGAGTCCTTTCATGAAGGTGGCTAATTaGAACGTTTCACCTGGACAGACAAAAGGACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHFMSPFMKVAN*NVSPGQTKGLG Trigger: TCCTAGTCCTTTTGTCTGTCCAGGTGAAACGTTCAAATTAGCCACCTTCATGAAAGGACTCATGAAATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAACCACCTGGTCCCCATaGCAGTTATTGTATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKTTWSP*QLLYSK Trigger: CTTGGAATACAATAACTGTCATGGGGACCAGGTGGT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAAGCTGGATGAAGATGTaGTTGAGAGACGGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKSWMKM*LRDGQK Trigger: CTTTTGCCCGTCTCTCAATCACATCTTCATCCAGCT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTTCTTTCTTTAACGAATaGAGTGCTGAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SEQDNLSALLSASAPFNCSFFNE*SAEVKK Trigger: CTTCTTCACCTCAGCACTGCATTCGTTAAAGAAAGA...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACTCCAGGCTCATAGCTaGAGAGAAAGTCTAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKLQAHS*RESLAM Trigger: CATTGCTAGACTTTCTCTCCAGCTATGAGCCTGGAG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACCTGGGGAAGACAAGTaGTGTGTTGAAATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQPGEDK*CVEMSM Trigger: CATAGACATTTCAACACATCACTTGTCTTCCCCAGG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAGAAGACGGTCAACCATaGATTCCCAAGGAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKEDGQP*IPKEDH Trigger: ATGATCTTCCTTGGGAATTCATGGTTGACCGTCTTC...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTGCTGACAGGCGGCTTTaGTGGTATTATCACGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLADRRL*WYYHVF Trigger: AAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGC...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAATACACACTTCCAGAGTaGACTAAGGATACCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQYTLPE*TKDTSL Trigger: GAGACTGGTATCCTTAGTGCACTCTGGAAGTGTGTA...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAAATTGCTGCATTCTATaGTGCCCGACACCACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKNCCIL*CPTPHD Trigger: ATCATGTGGTGTCGGGCAGCATAGAATGCAGCAATT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAAAAAAGTCTGCTCCTTaGGGTAGAAAGAATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKKKSAP*GRKNPE Trigger: CTCTGGATTCTTTCTACCTCAAGGAGCAGACTTTTT...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 39% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR TCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTATGCAGTGTAGTAGCTaGAAGGGCTATAGGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLMQCSS*KGYRRL Trigger: TAACCTCCTATAGCCCTTTCAGCTACTACACTGCAT...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTTGCTGCATTCTATGCTaGCCGACACCACATGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLCCILC*PTPHDK Trigger: TTTATCATGTGGTGTCGGGCAGCATAGAATGCAGCA...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAATGTAAACAGCACTCATaGGGCCTTTGTATTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQCKQHS*GLCIRL Trigger: CAATCGAATACAAAGGCCCCATGAGTGCTGTTTACA...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTGAACAGGAAGAGTGCTaGTCCTTTCTTCAGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLEQEEC*SFLQLI Trigger: AATGAGCTGAAGAAAGGACCAGCACTCTTCCTGTTC...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCCACCAACAGTTTATTaGCACAAACAACACCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLPPTVY*HKQHLI Trigger: GATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGG...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR GCA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAATCTTTCTTTAACGAATaGAGTGCTGAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KICITIFPMYSLHLWLLQSFFNE*SAEVKK Trigger: CTTCTTCACCTCAGCACTGCATTCGTTAAAGAAAGA...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTTCACATCAACAATTGTaGCAAACTCCTTCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKICITIFPMYSLHLWLLSHQQL*QTPSQE Trigger: CTCCTGTGAAGGAGTTTGCCACAATTGTTGATGTGA...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 90 bp | AGGGCGCAGCCGAGAGCCACGGCCCCGCACAGCAGCTCTGGCCGCTaGCGCGCCATAAGCGAGGCGCCGCGCAAGCCGCGGCGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RAQPRATAPHSSSGR*RAISEAPRKPRRIR Trigger: CCGGATCCGCCGCGGCTTGCGCGGCGCCTCGCTTATGGCGCGCCAGCGGCCAGAGCTGCTGTGCGGGGCCGTGGCTCTCGGCTGCGCCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000118679.2 ENSMUST00000145225.8 ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| CDS CCA 90 bp | GAAGAGCAGGGCGCAGCCGAGAGCCACGGCCCCGCACAGCAGCTCTaGCCGCTGGCGCGCCATAAGCGAGGCGCCGCGCAAGCCGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EEQGAAESHGPAQQL*PLARHKRGAAQAAA Trigger: CGCCGCGGCTTGCGCGGCGCCTCGCTTATGGCGCGCCAGCGGCCAGAGCTGCTGTGCGGGGCCGTGGCTCTCGGCTGCGCCCTGCTCTTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000118679.2 ENSMUST00000145225.8 ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| CDS GCA 90 bp | TGGCTGTGGCGCCGGAGTAGCCTGTGCTGCTGCTCCAGGGTCCGCTaGCGGCGCAGCAGGCGGTGCCCATCCCTGCGGGCACTAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLWRRSSLCCCSRVR*RRSRRCPSLRALRS Trigger: GCTCCTTAGTGCCCGCAGGGATGGGCACCGCCTGCTGCGCCGGCAGCGGACCCTGGAGCAGCAGCACAGGCTACTCCGGCGCCACAGCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS GCA 90 bp | AGAGCCTGCAGTTTCTGGCTGTGGCGCCGGAGTAGCCTGTGCTGCTaGTCCAGGGTCCGCTGCCGGCGCAGCAGGCGGTGCCCATCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RACSFWLWRRSSLCC*SRVRCRRSRRCPSL Trigger: CAGGGATGGGCACCGCCTGCTGCGCCGGCAGCGGACCCTGGAGCAGCAGCACAGGCTACTCCGGCGCCACAGCCAGAAACTGCAGGCTCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS GCA 90 bp | TACAGAGCCTGCAGTTTCTGGCTGTGGCGCCGGAGTAGCCTGTGCTaGTGCTCCAGGGTCCGCTGCCGGCGCAGCAGGCGGTGCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: YRACSFWLWRRSSLC*CSRVRCRRSRRCPS Trigger: GGATGGGCACCGCCTGCTGCGCCGGCAGCGGACCCTGGAGCAGCAGCACAGGCTACTCCGGCGCCACAGCCAGAAACTGCAGGCTCTGTA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | GACACACAGCTCACAGACATTGTGAGTCCTGGAGAGGGCTGGCCCCTGTGGCAGAGGGAGCCTGAGCCCTaGGGGCCGCCACCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DTQLTDIVSPGEGWPLWQREPEP*GPPPSS Trigger: GGACGAGGGTGGCGGCCCCAAGGGCTCAGGCTCCCT...CTGCCACAGGGGCCAGCCCTCTCCAGGACTCACAATGTCTGTGAGCTGTGTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGGAAGAGGTCAAGGACCGGAGATCTCGAGGAGAAAAAGCTGACAGGCGGCAGGGAGCCTGAGCCCTaGGGGCCGCCACCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWKRSRTGDLEEKKLTGGREPEP*GPPPSS Trigger: GGACGAGGGTGGCGGCCCCAAGGGCTCAGGCTCCCT...GCCGCCTGTCAGCTTTTTCTCCTCGAGATCTCCGGTCCTTGACCTCTTCCAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147884.2 |
||
| CDS GCA 90 bp | AGGCGGTGCCCATCCCTGCGGGCACTAAGGAGCCTGCCCTCCACCTaGTCCTGTGTACGGCGTAGGCTGCTCATCTCAGATCTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRCPSLRALRSLPST*SCVRRRLLISDLSF Trigger: GAAGCTGAGATCTGAGATGAGCAGCCTACGCCGTACACAGGAGCAGGTGGAGGGCAGGCTCCTTAGTGCCCGCAGGGATGGGCACCGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTGCCATGCCCCGGGATATGGTCCTGCAACATGCAGTGTAGTAGCTGAATCGGCGTCCTCGCTGTaGTTCCCGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KACHAPGYGPATCSVVAESASSL*FPPPPP Trigger: CGGCGGCGGCGGCGGGAACAACAGCGAGGACGCCGA...TTCAGCTACTACACTGCATGTTGCAGGACCATATCCCGGGGCATGGCAAGCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGAGAAGCGGCTTCATCGCCCGGCGGACAAACTTCTCAATGTAAACAGCACTCGGCGTCCTCGCTGTaGTTCCCGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CREAASSPGGQTSQCKQHSASSL*FPPPPP Trigger: CGGCGGCGGCGGCGGGAACAACAGCGAGGACGCCGA...GTGCTGTTTACATTGAGAAGTTTGTCCGCCGGGCGATGAAGCCGCTTCTCTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCAGAAGAGGGCTTCAAATACCCTAGAACTGAAGGCACAGGCAGCTGTGAGGGAGCCTGAGCCCTaGGGGCCGCCACCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSQKRASNTLELKAQAAVREPEP*GPPPSS Trigger: GGACGAGGGTGGCGGCCCCAAGGGCTCAGGCTCCCT...CACAGCTGCCTGTGCCTTCAGTTCTAGGGTATTTGAAGCCCTCTTCTGGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CAA 90 bp | CATCGCCCGGCGGACAAACTTCTCAATGTAAACAGCACTCATGGGGCCTTTGTAAGGGAGCCTGAGCCCTaGGGGCCGCCACCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRPADKLLNVNSTHGAFVREPEP*GPPPSS Trigger: GGACGAGGGTGGCGGCCCCAAGGGCTCAGGCTCCCT...TACAAAGGCCCCATGAGTGCTGTTTACATTGAGAAGTTTGTCCGCCGGGCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147884.2 ENSMUST00000155221.8 |
||
| CDS CCA 90 bp | ACCCATGGACTTGGAGTGGTTCGGTCGAGCCTTTCCCAGAGGGGCTaGTTCCTTAGCCCCACCTTGGCCTTCCAGCTCCCTCTCCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: THGLGVVRSSLSQRG*FLSPTLAFQLPLHS Trigger: ACTATGGAGAGGGAGCTGGAAGGCCAAGGTGGGGCTAAGGAACCAGCCCCTCTGGGAAAGGCTCGACCGAACCACTCCAAGTCCATGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AACCACATGCTTGGGGGACAGAGAAATGGCTTAAGAGCACTGACTGCTTTTCCATCGGCGTCCTCGCTGTaGTTCCCGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NHMLGGQRNGLRALTAFPSASSL*FPPPPP Trigger: CGGCGGCGGCGGCGGGAACAACAGCGAGGACGCCGA...TGGAAAAGCAGTCAGTGCTCTTAAGCCATTTCTCTGTCCCCCAAGCATGTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS TCA 90 bp | AAAGTGGAGCTGGTGGTGGAGGGCGGAGGGGTGTCACCAGGTAACTaGGTTGTACCCATGGACTTGGAGTGGTTCGGTCGAGCCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KVELVVEGGGVSPGN*VVPMDLEWFGRAFP Trigger: GGGAAAGGCTCGACCGAACCACTCCAAGTCCATGGGTACAACTCAGTTACCTGGTGACACCCCTCCGCCCTCCACCACCAGCTCCACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCAGGGAGCCTGAGCCCTaGGGGCCGCCACCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TCILQCRHWRIRQASSTCREPEP*GPPPSS Trigger: GGACGAGGGTGGCGGCCCCAAGGGCTCAGGCTCCCT...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS TCA 90 bp | AGGCTGCTCATCTCAGATCTCAGCTTCTGCATCGCATTCTCCACGTaGGAGATGTGTTCGCGCTGCAGCACTGCCTTGCTCTGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLISDLSFCIAFST*EMCSRCSTALLWTQ Trigger: CTGTGTCCAGAGCAAGGCAGTGCTGCAGCGCGAACACATCTCTCACGTGGAGAATGCGATGCAGAAGCTGAGATCTGAGATGAGCAGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 90 bp | TCCTATTCTCATGCTTCGTCTCTGAAGCCAAAGTGGAGCTGGTGGTaGAGGGCGGAGGGGTGTCACCAGGTAACTGAGTTGTACCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SYSHASSLKPKWSWW*RAEGCHQVTELYPW Trigger: CCATGGGTACAACTCAGTTACCTGGTGACACCCCTCCGCCCTCCACCACCAGCTCCACTTTGGCTTCAGAGACGAAGCATGAGAATAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AACAGAGATAAGATTTTGCAAGTAGTCTGGCCTTTTAATGCTCACTTAGCCAGCTCGGCGTCCTCGCTGTaGTTCCCGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NRDKILQVVWPFNAHLASSASSL*FPPPPP Trigger: CGGCGGCGGCGGCGGGAACAACAGCGAGGACGCCGA...GCTGGCTAAGTGAGCATTAAAAGGCCAGACTACTTGCAAAATCTTATCTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTGCCAAGCCCTGGGAGTCAACGCTGGGCTGTTTTCCCACAGTAAAAAGCCACCCACTGTCTGGTaGACACACAGCTCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: CCCQALGVNAGLFSHSKKPPTVW*THSSQT Trigger: TGTCTGTGAGCTGTGTGTCAACCAGACAGTGGGTGG...CTTTTTACTGTGGGAAAACAGCCCAGCGTTGACTCCCAGGGCTTGGCAGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS CCA 90 bp | AGTCTGTCCTATTCTCATGCTTCGTCTCTGAAGCCAAAGTGGAGCTaGTGGTGGAGGGCGGAGGGGTGTCACCAGGTAACTGAGTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSYSHASSLKPKWS*WWRAEGCHQVTELY Trigger: GTACAACTCAGTTACCTGGTGACACCCCTCCGCCCTCCACCACCAGCTCCACTTTGGCTTCAGAGACGAAGCATGAGAATAGGACAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAATCGGCGTCCTCGCTGTaGTTCCCGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KICITIFPMYSLHLWLLQSASSL*FPPPPP Trigger: CGGCGGCGGCGGCGGGAACAACAGCGAGGACGCCGA...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS TCA 90 bp | ACGGTAGGAAGACGGTCAACCATGAATTCCCAAGGAAGATCATTCTaGGACACGTCGATCCTGGCCACAGTAAATGTGTCCTCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVGRRSTMNSQGRSF*DTSILATVNVSSGR Trigger: CCTGCCAGAGGACACATTTACTGTGGCCAGGATCGACGTGTCTCAGAATGATCTTCCTTGGGAATTCATGGTTGACCGTCTTCCTACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 90 bp | AAGGACCGGAGATCTCGAGGAGAAAAAGCTGACAGGCGGCTTTGCTaGTATTATCACGTCTTTTGCTCGACTGCAAGTGAACTTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDRRSRGEKADRRLC*YYHVFCSTASELEG Trigger: GCCCTCAAGTTCACTTGCAGTCGAGCAAAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGAGATCTCCGGTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000118679.2 ENSMUST00000145225.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTAGGGAGCCTGAGCCCTaGGGGCCGCCACCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKICITIFPMYSLHLWLLREPEP*GPPPSS Trigger: GGACGAGGGTGGCGGCCCCAAGGGCTCAGGCTCCCT...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAAAGCGGTACCTGTTCTCCTCAATGTGAGGAATGGAGCTCGGGGCAGTGGTCCACCAACAGTTTATaGCCACAAACAACACCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EESGTCSPQCEEWSSGQWSTNSL*PQTTPD Trigger: ATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGGA...CCACTGCCCCGAGCTCCATTCCTCACATTGAGGAGAACAGGTACCGCTTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGATTCAATGCCTCTTCTGGCCTCTCTGGATACCATACATACATGCAGGCAATGTTCAGGGTCTTGTaGGTTCTGCAGCTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRFNASSGLSGYHTYMQAMFRVL*VLQLRP Trigger: GGGCCTGAGCTGCAGAACCAACAAGACCCTGAACAT...TGCCTGCATGTATGTATGGTATCCAGAGAGGCCAGAAGAGGCATTGAATCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS GCA 90 bp | GTCAAGGACCGGAGATCTCGAGGAGAAAAAGCTGACAGGCGGCTTTaGTGGTATTATCACGTCTTTTGCTCGACTGCAAGTGAACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKDRRSRGEKADRRL*WYYHVFCSTASELE Trigger: CTCAAGTTCACTTGCAGTCGAGCAAAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGAGATCTCCGGTCCTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000118679.2 ENSMUST00000145225.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGTTCTTCTGAAGGTCCTGAGTGCACTCATGGGGCCTTaGTATTCGATTGGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GEMAQRLRALTVLLKVLSALMGP*YSIGPK Trigger: TTTTGGACCAATCGAATACAAAGGCCCCATGAGTGC...ACTCAGGACCTTCAGAAGAACAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAACATGCTATAAAAGTTCAGCACAACAAATGGGGCCTGGTGGCCCTGAGAGCACTCATGGGGCCTTaGTATTCGATTGGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQHAIKVQHNKWGLVALRALMGP*YSIGPK Trigger: TTTTGGACCAATCGAATACAAAGGCCCCATGAGTGC...TCTCAGGGCCACCAGGCCCCATTTGTTGTGCTGAACTTTTATAGCATGTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGAATCCAAAAGGTAGATGTTCAGGGTCTTGTTGGTTCTGCAGCTCAGGCCGCACTCATGGGGCCTTaGTATTCGATTGGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IGIQKVDVQGLVGSAAQAALMGP*YSIGPK Trigger: TTTTGGACCAATCGAATACAAAGGCCCCATGAGTGC...GGCCTGAGCTGCAGAACCAACAAGACCCTGAACATCTACCTTTTGGATTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145225.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGCAAGACAATCTAAGTGCACTTCTTTCTGCTTCAGCTCCTTTCAACTGTGCTAGTGAGGCCCACTaGAGGAAAGCGGTACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEQDNLSALLSASAPFNCASEAH*RKAVPV Trigger: AACAGGTACCGCTTTCCTCAAGTGGGCCTCACTAGC...ACAGTTGAAAGGAGCTGAAGCAGAAAGAAGTGCACTTAGATTGTCTTGCTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CAA 90 bp | GTGTATGTGTGGGCATGCTCATGGAAGCCAGAAGAGGGCTTCAAATACCCTAGATCCACCAACAGTTTATaGCCACAAACAACACCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VYVWACSWKPEEGFKYPRSTNSL*PQTTPD Trigger: ATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGGA...TCTAGGGTATTTGAAGCCCTCTTCTGGCTTCCATGAGCATGCCCACACATACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118679.2 |
||
| CDS-3UTR CAA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAACGCTGCAGCACTGCCTaGCTCTGGACACAGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKRCSTA*LWTQSW Trigger: CCAAGACTGTGTCCAGAGCAAGGCAGTGCTGCAGCG...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAGTGGCCACAAGGATCTaGAGCCATGTGTGCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KICITIFPMYSLHLWLLQVATRI*SHVCSG Trigger: CCCCGAGCACACATGGCTCAAGATCCTTGTGGCCAC...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAACCACCCACTGTCTGGTaGACACACAGCTCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: KICITIFPMYSLHLWLLQPPTVW*THSSQT Trigger: TGTCTGTGAGCTGTGTGTCAACCAGACAGTGGGTGG...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAAGCTAGTGAGGCCCACTaGAGGAAAGCGGTACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKASEAH*RKAVPV Trigger: AACAGGTACCGCTTTCCTCAAGTGGGCCTCACTAGC...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAATGTTCAGGGTCTTGTaGGTTCTGCAGCTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KICITIFPMYSLHLWLLQMFRVL*VLQLRP Trigger: GGGCCTGAGCTGCAGAACCAACAAGACCCTGAACAT...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCGAACTTCATGAGGGCTaGTTTGGGATCCAGGATATA | + |
|
Preference number: 5 (lower is better) Translates to: TCILQCRHWRIRQASSTCELHEG*FGIQDI Trigger: TATATCCTGGATCCCAAACAAGCCCTCATGAAGTTC...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CAA 90 bp | ACTTGTATATTGCAATGTAGGCACTGGAGGATAAGGCAGGCTTCTTCAACATGCTCCACCAACAGTTTATaGCCACAAACAACACCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TCILQCRHWRIRQASSTCSTNSL*PQTTPD Trigger: ATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGGA...GCATGTTGAAGAAGCCTGCCTTATCCTCCAGTGCCTACATTGCAATATACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CAA 90 bp | AACTGCTGGGCAGAGTTAAAACCTCAAGAGGGAGTCTCTCAGAAAACCTGTAAACTTTCACATCAACAATaGTGGCAAACTCCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NCWAELKPQEGVSQKTCKLSHQQ*WQTPSQ Trigger: CTGTGAAGGAGTTTGCCACAATTGTTGATGTGAAAG...TTTACAGGTTTTCTGAGAGACTCCCTCTTGAGGTTTTAACTCTGCCCAGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118362.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTGCACTCATGGGGCCTTaGTATTCGATTGGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NKICITIFPMYSLHLWLLALMGP*YSIGPK Trigger: TTTTGGACCAATCGAATACAAAGGCCCCATGAGTGC...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAGAACTTCATGAGGGCTaGTTTGGGATCCAGGATATA | + |
|
Preference number: 5 (lower is better) Translates to: KICITIFPMYSLHLWLLQELHEG*FGIQDI Trigger: TATATCCTGGATCCCAAACAAGCCCTCATGAAGTTC...TTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCAAAATCCACCAACAGTTTATaGCCACAAACAACACCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLHNYIPNVQSSPLAPSKSTNSL*PQTTPD Trigger: ATCAGGTGTTGTTTGTGGCAATAAACTGTTGGTGGA...TTTTGAAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS-3UTR CAA 90 bp | AATAAAATTTGCATAACTATATTCCCAATGTACAGTCTTCACCTCTGGCTCCTTCTTTCACATCAACAATaGTGGCAAACTCCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NKICITIFPMYSLHLWLLLSHQQ*WQTPSQ Trigger: CTGTGAAGGAGTTTGCCACAATTGTTGATGTGAAAG...AAGGAGCCAGAGGTGAAGACTGTACATTGGGAATATAGTTATGCAAATTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS GCA 72 bp | CGCCGGAGTAGCCTGTGCTGCTGCTCCAGGGTCCGCTaGCGGCGCAGCAGGCGGTGCCCATCCCTGCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRSSLCCCSRVR*RRSRRCPSLRA Trigger: TGCCCGCAGGGATGGGCACCGCCTGCTGCGCCGGCAGCGGACCCTGGAGCAGCAGCACAGGCTACTCCGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS GCA 72 bp | AGTTTCTGGCTGTGGCGCCGGAGTAGCCTGTGCTGCTaGTCCAGGGTCCGCTGCCGGCGCAGCAGGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFWLWRRSSLCC*SRVRCRRSRRC Trigger: GCACCGCCTGCTGCGCCGGCAGCGGACCCTGGAGCAGCAGCACAGGCTACTCCGGCGCCACAGCCAGAAACT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 72 bp | CTTGGAGTGGTTCGGTCGAGCCTTTCCCAGAGGGGCTaGTTCCTTAGCCCCACCTTGGCCTTCCAGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGVVRSSLSQRG*FLSPTLAFQLP Trigger: AGGGAGCTGGAAGGCCAAGGTGGGGCTAAGGAACCAGCCCCTCTGGGAAAGGCTCGACCGAACCACTCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CAA 72 bp | TGGTGGAGGGCGGAGGGGTGTCACCAGGTAACTGAGTaGTACCCATGGACTTGGAGTGGTTCGGTCGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WWRAEGCHQVTE*YPWTWSGSVEP Trigger: AGGCTCGACCGAACCACTCCAAGTCCATGGGTACAACTCAGTTACCTGGTGACACCCCTCCGCCCTCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 72 bp | GCCTTCTTTAAATACAGAGCCTGCAGTTTCTGGCTGTaGCGCCGGAGTAGCCTGTGCTGCTGCTCCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AFFKYRACSFWL*RRSSLCCCSRV Trigger: GACCCTGGAGCAGCAGCACAGGCTACTCCGGCGCCACAGCCAGAAACTGCAGGCTCTGTATTTAAAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 72 bp | TCTCGCGCCTTCTTTAAATACAGAGCCTGCAGTTTCTaGCTGTGGCGCCGGAGTAGCCTGTGCTGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRAFFKYRACSF*LWRRSSLCCCS Trigger: GGAGCAGCAGCACAGGCTACTCCGGCGCCACAGCCAGAAACTGCAGGCTCTGTATTTAAAGAAGGCGCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 72 bp | GCGGAGGGGTGTCACCAGGTAACTGAGTTGTACCCATaGACTTGGAGTGGTTCGGTCGAGCCTTTCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AEGCHQVTELYP*TWSGSVEPFPE Trigger: CTCTGGGAAAGGCTCGACCGAACCACTCCAAGTCCATGGGTACAACTCAGTTACCTGGTGACACCCCTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 72 bp | CATGCTTCGTCTCTGAAGCCAAAGTGGAGCTGGTGGTaGAGGGCGGAGGGGTGTCACCAGGTAACTGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HASSLKPKWSWW*RAEGCHQVTEL Trigger: CAACTCAGTTACCTGGTGACACCCCTCCGCCCTCCACCACCAGCTCCACTTTGGCTTCAGAGACGAAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
||
| CDS CCA 72 bp | TCTCATGCTTCGTCTCTGAAGCCAAAGTGGAGCTGGTaGTGGAGGGCGGAGGGGTGTCACCAGGTAACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHASSLKPKWSW*WRAEGCHQVTE Trigger: CTCAGTTACCTGGTGACACCCCTCCGCCCTCCACCACCAGCTCCACTTTGGCTTCAGAGACGAAGCATGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS CCA 72 bp | CTGTCCTATTCTCATGCTTCGTCTCTGAAGCCAAAGTaGAGCTGGTGGTGGAGGGCGGAGGGGTGTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: LSYSHASSLKPK*SWWWRAEGCHQ Trigger: CTGGTGACACCCCTCCGCCCTCCACCACCAGCTCCACTTTGGCTTCAGAGACGAAGCATGAGAATAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS GCA 72 bp | ATTCTCCACGTGAGAGATGTGTTCGCGCTGCAGCACTaGCTTGCTCTGGACACAGTCTTGGGTAGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ILHVRDVFALQH*LALDTVLGRRA Trigger: AGCCCTCCTACCCAAGACTGTGTCCAGAGCAAGGCAGTGCTGCAGCGCGAACACATCTCTCACGTGGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS GCA 72 bp | TCTTGGAGCTCTCGCGCCTTCTTTAAATACAGAGCCTaGAGTTTCTGGCTGTGGCGCCGGAGTAGCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SWSSRAFFKYRA*SFWLWRRSSLC Trigger: GCACAGGCTACTCCGGCGCCACAGCCAGAAACTGCAGGCTCTGTATTTAAAGAAGGCGCGAGAGCTCCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS CCA 72 bp | TATTCTCATGCTTCGTCTCTGAAGCCAAAGTGGAGCTaGTGGTGGAGGGCGGAGGGGTGTCACCAGGTAACT | + |
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Preference number: 6 (lower is better) Translates to: YSHASSLKPKWS*WWRAEGCHQVT Trigger: AGTTACCTGGTGACACCCCTCCGCCCTCCACCACCAGCTCCACTTTGGCTTCAGAGACGAAGCATGAGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS TCA 72 bp | TCCTCTGGCAGGAGCCGAGCTAGCTGGATGAAGATGTaGTTGAGAGACGGGCAAAAGCCACACCACTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SSGRSRASWMKM*LRDGQKPHHCV Trigger: TACACAGTGGTGTGGCTTTTGCCCGTCTCTCAATCACATCTTCATCCAGCTAGCTCGGCTCCTGCCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS TCA 72 bp | AGAAGGTCAAGTAACCAGGAGGCTGGGGTGAACCGCTaGATTCAAAGTATCCGAGTACTCCAGGCTCATAGC | + |
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Preference number: 6 (lower is better) Translates to: RRSSNQEAGVNR*IQSIRVLQAHS Trigger: GCTATGAGCCTGGAGTACTCGGATACTTTGAATTCAGCGGTTCACCCCAGCCTCCTGGTTACTTGACCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000145225.8 |
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| CDS TCA 72 bp | AGAGGTCAAGGACCGGAGATCTCGAGGAGAAAAAGCTaGCAGGCGGCTTTGCTGGTATTATCACGTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: RGQGPEISRRKS*QAALLVLSRLL Trigger: CAAAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGAGATCTCCGGTCCTTGACCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000118679.2 ENSMUST00000145225.8 |
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| CDS GCA 72 bp | CGGAGATCTCGAGGAGAAAAAGCTGACAGGCGGCTTTaGTGGTATTATCACGTCTTTTGCTCGACTGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: RRSRGEKADRRL*WYYHVFCSTAS Trigger: ACTTGCAGTCGAGCAAAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGAGATCTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000118679.2 ENSMUST00000145225.8 |
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| CDS TCA 72 bp | GGGTTACTTCCCAGAAGGTATCAGTCGTCACTTCCGTaGTCAAATGCTGAGTGGGAAACTGAGCAGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: GLLPRRYQSSLP*SNAEWETEQNH Trigger: GTGATTCTGCTCAGTTTCCCACTCAGCATTTGATCACGGAAGTGACGACTGATACCTTCTGGGAAGTAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS TCA 72 bp | AGACGGTCAACCATGAATTCCCAAGGAAGATCATTCTaGGACACGTCGATCCTGGCCACAGTAAATGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RRSTMNSQGRSF*DTSILATVNVS Trigger: GGACACATTTACTGTGGCCAGGATCGACGTGTCTCAGAATGATCTTCCTTGGGAATTCATGGTTGACCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038424.14 |
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| CDS CCA 72 bp | AGATCTCGAGGAGAAAAAGCTGACAGGCGGCTTTGCTaGTATTATCACGTCTTTTGCTCGACTGCAAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: RSRGEKADRRLC*YYHVFCSTASE Trigger: TTCACTTGCAGTCGAGCAAAAGACGTGATAATACCAGCAAAGCCGCCTGTCAGCTTTTTCTCCTCGAGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038424.14 ENSMUST00000118362.8 ENSMUST00000118679.2 ENSMUST00000145225.8 |
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