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Pregenerated sensors for TXN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028367

Ensembl transcript IDs: ENSMUST00000030051.6

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGACATCAGATTCCCTGGAACTGGAGGAACAGGTAGCTGCCGTATaGATGCTGAGAACTGAACTTTGGCCCTCTGCAAGAACAGGCAAT +
Preference number: 1 (lower is better)
Translates to: RTSDSLELEEQVAAV*MLRTELWPSARTGN
Trigger: ATTGCCTGTTCTTGCAGAGGGCCAAAGTTCAGTTCTCAGCATCCATACGGCAGCTACCTGTTCCTCCAGTTCCAGGGAATCTGATGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR CCA 90 bp TTACATGTAATGTACATGTACTTCAGACATGCTTGGTGCCCATGGTaGCCAGTAGAGGACATCAGATTCCCTGGAACTGGAGGAACAGGT +
Preference number: 1 (lower is better)
Translates to: LHVMYMYFRHAWCPW*PVEDIRFPGTGGTG
Trigger: ACCTGTTCCTCCAGTTCCAGGGAATCTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACATTACATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR GCA 90 bp TTTATGTGTATGTTAGTTACATGTAATGTACATGTACTTCAGACATaGTTGGTGCCCATGGTGGCCAGTAGAGGACATCAGATTCCCTGG +
Preference number: 1 (lower is better)
Translates to: FMCMLVTCNVHVLQT*LVPMVASRGHQIPW
Trigger: CCAGGGAATCTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACATTACATGTAACTAACATACACATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR-3UTR CCA 90 bp ATCAGATTCCCTGGAACTGGAGGAACAGGTAGCTGCCGTATGGATGCTGAGAACTTTGCCTTAAAGCAGTaGCTTAGGGGACTAAATCAG +
Preference number: 2 (lower is better)
Translates to: IRFPGTGGTGSCRMDAENFALKQ*LRGLNQ
Trigger: CTGATTTAGTCCCCTAAGCCACTGCTTTAAGGCAAA...GTTCTCAGCATCCATACGGCAGCTACCTGTTCCTCCAGTTCCAGGGAATCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR CAA 90 bp ATGTGTATGTTAGTTACATGTAATGTACATGTACTTCAGACATGCTaGGTGCCCATGGTGGCCAGTAGAGGACATCAGATTCCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: MCMLVTCNVHVLQTC*VPMVASRGHQIPWN
Trigger: GTTCCAGGGAATCTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACATTACATGTAACTAACATACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR-3UTR CCA 90 bp ATCAGATTCCCTGGAACTGGAGGAACAGGTAGCTGCCGTATGGATGCTGAGAACTCATTTATAATCAGATaGCAGTTGGGTATAGACTCT +
Preference number: 2 (lower is better)
Translates to: IRFPGTGGTGSCRMDAENSFIIR*QLGIDS
Trigger: AGAGTCTATACCCAACTGCCATCTGATTATAAATGA...GTTCTCAGCATCCATACGGCAGCTACCTGTTCCTCCAGTTCCAGGGAATCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR CCA 72 bp GATTCCCTGGAACTGGAGGAACAGGTAGCTGCCGTATaGATGCTGAGAACTGAACTTTGGCCCTCTGCAAGA +
Preference number: 3 (lower is better)
Translates to: DSLELEEQVAAV*MLRTELWPSAR
Trigger: TCTTGCAGAGGGCCAAAGTTCAGTTCTCAGCATCCATACGGCAGCTACCTGTTCCTCCAGTTCCAGGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR CCA 72 bp ATGTACATGTACTTCAGACATGCTTGGTGCCCATGGTaGCCAGTAGAGGACATCAGATTCCCTGGAACTGGA +
Preference number: 3 (lower is better)
Translates to: MYMYFRHAWCPW*PVEDIRFPGTG
Trigger: TCCAGTTCCAGGGAATCTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR CCA 72 bp GTAATGTACATGTACTTCAGACATGCTTGGTGCCCATaGTGGCCAGTAGAGGACATCAGATTCCCTGGAACT +
Preference number: 3 (lower is better)
Translates to: VMYMYFRHAWCP*WPVEDIRFPGT
Trigger: AGTTCCAGGGAATCTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR GCA 72 bp ATGTTAGTTACATGTAATGTACATGTACTTCAGACATaGTTGGTGCCCATGGTGGCCAGTAGAGGACATCAG +
Preference number: 3 (lower is better)
Translates to: MLVTCNVHVLQT*LVPMVASRGHQ
Trigger: CTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACATTACATGTAACTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR CCA 72 bp CACCTCTCCAGCTCCTATCTTTTTGCCTTAAAGCAGTaGCTTAGGGGACTAAATCAGGCCATTTCTCATTTA +
Preference number: 3 (lower is better)
Translates to: HLSSSYLFALKQ*LRGLNQAISHL
Trigger: TAAATGAGAAATGGCCTGATTTAGTCCCCTAAGCCACTGCTTTAAGGCAAAAAGATAGGAGCTGGAGAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
CDS-3UTR TCA 90 bp TGTAATGTACATGTACTTCAGACATGCTTGGTGCCCATGGTGGCCAGTAGAGGAGCGGCCAGGGCCTCCTaGAAAGCTTCCTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: CNVHVLQTCLVPMVASRGAARAS*KASLLS
Trigger: CGAGAGCAAGGAAGCTTTTCAGGAGGCCCTGGCCGC...TCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACATTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
CDS-3UTR CCA 90 bp TGGTGCCCATGGTGGCCAGTAGAGGACATCAGATTCCCTGGAACTGGAGGAACACAAGGAACACCACATTaGAATACTTGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: WCPWWPVEDIRFPGTGGTQGTPH*NTCHRG
Trigger: CCCTCTGTGACAAGTATTCCAATGTGGTGTTCCTTG...TGTTCCTCCAGTTCCAGGGAATCTGATGTCCTCTACTGGCCACCATGGGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
3UTR CAA 72 bp TTAGTTACATGTAATGTACATGTACTTCAGACATGCTaGGTGCCCATGGTGGCCAGTAGAGGACATCAGATT +
Preference number: 4 (lower is better)
Translates to: LVTCNVHVLQTC*VPMVASRGHQI
Trigger: AATCTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACATTACATGTAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
CDS-3UTR CAA 90 bp ATCAGATTCCCTGGAACTGGAGGAACAGGTAGCTGCCGTATGGATGCTGAGAACAAGGTCGGCATGCATTaGACTTCACAGTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: IRFPGTGGTGSCRMDAENKVGMH*TSQSAA
Trigger: TGCTGCAGACTGTGAAGTCAAATGCATGCCGACCTT...GTTCTCAGCATCCATACGGCAGCTACCTGTTCCTCCAGTTCCAGGGAATCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
CDS-3UTR CAA 90 bp ATGTACATGTACTTCAGACATGCTTGGTGCCCATGGTGGCCAGTAGAGGACATCGCTTCAAGCTTTTCCTaGTTAGCACCGGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: MYMYFRHAWCPWWPVEDIASSFS*LAPENS
Trigger: GGAGTTCTCCGGTGCTAACAAGGAAAAGCTTGAAGC...GATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACATGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6
CDS-3UTR CAA 90 bp TACTTCAGACATGCTTGGTGCCCATGGTGGCCAGTAGAGGACATCAGATTCCCTTCAAGGAACACCACATaGGAATACTTGTCACAGAGG +
Preference number: 5 (lower is better)
Translates to: YFRHAWCPWWPVEDIRFPSRNTT*EYLSQR
Trigger: CCTCTGTGACAAGTATTCCAATGTGGTGTTCCTTGA...AGGGAATCTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030051.6