Pregenerated sensors for TXLNG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038344Ensembl transcript IDs: ENSMUST00000041370.11, ENSMUST00000112314.8, ENSMUST00000112315.2, ENSMUST00000112316.9
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAGACTACACCTGCCTCAAGTTCCAGGCAAGCCAGGAATACAGTaGGTTTCAAGTCAGCCTGGGCCACAGATAAAGGACAAACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: QRLHLPQVPGKPGIQ*VSSQPGPQIKDKQK Trigger: TTTTTGTTTGTCCTTTATCTGTGGCCCAGGCTGACTTGAAACTCACTGTATTCCTGGCTTGCCTGGAACTTGAGGCAGGTGTAGTCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR GCA 90 bp | AACAGAAAAATAGGAATGGTTAAGAGCTCTTGCTGCTCTTCTTGTTaGTCTTGCAGAGGACCCAACATTGGGCAGCTCACACTGCATGTA | + |
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Preference number: 1 (lower is better) Translates to: NRKIGMVKSSCCSSC*SCRGPNIGQLTLHV Trigger: TACATGCAGTGTGAGCTGCCCAATGTTGGGTCCTCTGCAAGAGCAACAAGAAGAGCAGCAAGAGCTCTTAACCATTCCTATTTTTCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR GCA 90 bp | GATGTTGCTATTAACAGAAAAATAGGAATGGTTAAGAGCTCTTGCTaGTCTTCTTGTTGCTCTTGCAGAGGACCCAACATTGGGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: DVAINRKIGMVKSSC*SSCCSCRGPNIGQL Trigger: GAGCTGCCCAATGTTGGGTCCTCTGCAAGAGCAACAAGAAGAGCAGCAAGAGCTCTTAACCATTCCTATTTTTCTGTTAATAGCAACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR GCA 90 bp | CAGGATGTTGCTATTAACAGAAAAATAGGAATGGTTAAGAGCTCTTaGTGCTCTTCTTGTTGCTCTTGCAGAGGACCCAACATTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QDVAINRKIGMVKSS*CSSCCSCRGPNIGQ Trigger: CTGCCCAATGTTGGGTCCTCTGCAAGAGCAACAAGAAGAGCAGCAAGAGCTCTTAACCATTCCTATTTTTCTGTTAATAGCAACATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR TCA 90 bp | TGCAGACAGATTCTCAATCTTCCTGGTTGGTTATATGCAATGGTTTaGTTCTTTCCCTATTCTAATAAGCCCGCTTGTGTTACACATAGA | + |
|
Preference number: 1 (lower is better) Translates to: CRQILNLPGWLYAMV*FFPYSNKPACVTHR Trigger: TCTATGTGTAACACAAGCGGGCTTATTAGAATAGGGAAAGAATCAAACCATTGCATATAACCAACCAGGAAGATTGAGAATCTGTCTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR CCA 90 bp | ATATGGTCCAAAAGAACTTTGATTTATACACTCAGTATCTACAAATaGGGCTTGAAAGATGGTTTAGTGGTTAAGATCACTGGCTGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: IWSKRTLIYTLSIYK*GLKDGLVVKITGCS Trigger: AGAACAGCCAGTGATCTTAACCACTAAACCATCTTTCAAGCCCCATTTGTAGATACTGAGTGTATAAATCAAAGTTCTTTTGGACCATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTTGCAAGCGGCACCAGGCACATGTaGAGACACATGCGTACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LFFQRIWVEFQHTRWLASGTRHM*RHMRTE Trigger: TTCTGTACGCATGTGTCTGCACATGTGCCTGGTGCC...GCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR CAA 90 bp | TGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTaGCAAGCATGTGTTGACTCCAGTTTCAGGGGATCTGACACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: CSSRESGLNSSTHGG*QACVDSSFRGSDTL Trigger: AAGGGTGTCAGATCCCCTGAAACTGGAGTCAACACATGCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR CAA 90 bp | TACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGATCTTGAGTTaGAGGTCAGCCTGGTCTACAGAGCAAGTTCTAGGACAACCCCTA | + |
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Preference number: 2 (lower is better) Translates to: YTPFISALRGRQILS*RSAWSTEQVLGQPL Trigger: TAGGGGTTGTCCTAGAACTTGCTCTGTAGACCAGGCTGACCTCAAACTCAAGATCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR CAA 90 bp | TGGTGGTACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGATCTaGAGTTTGAGGTCAGCCTGGTCTACAGAGCAAGTTCTAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: WWYTPFISALRGRQI*SLRSAWSTEQVLGQ Trigger: TTGTCCTAGAACTTGCTCTGTAGACCAGGCTGACCTCAAACTCAAGATCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTACCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGACACCCTTCTAGCCTCCTTGGGCACCAGGCACATGTGCAGACACATGCGTTCCTGGTTGGTTATATaGAATGGTTTGATTCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SDTLLASLGTRHMCRHMRSWLVI*NGLILS Trigger: GGAAAGAATCAAACCATTGCATATAACCAACCAGGA...ACGCATGTGTCTGCACATGTGCCTGGTGCCCAAGGAGGCTAGAAGGGTGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCACCCACACACAAAGAACATGTGCAGACACATaGGTACAGAAGATCCATACA | + |
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Preference number: 2 (lower is better) Translates to: TRDSQYPLLTSWSTHTQRTCADT*VQKIHT Trigger: TGTATGGATCTTCTGTACGCATGTGTCTGCACATGT...TCTTTGTGTGTGGGTGCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCAGGGGTGGTGGTACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGAGATTCTCAATCTTCCTaGTTGGTTATATGCAATGGT | + |
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Preference number: 2 (lower is better) Translates to: KARGGGTHLLSQHSEAGRDSQSS*LVICNG Trigger: ACCATTGCATATAACCAACCAGGAAGATTGAGAATC...TCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTACCACCACCCCTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTTGCAAGCAACGAAAAACCTAGGTaGAAGCCACTCATGGTGATA | + |
|
Preference number: 2 (lower is better) Translates to: LFFQRIWVEFQHTRWLASNEKPR*KPLMVI Trigger: TATCACCATGAGTGGCTTCCACCTAGGTTTTTCGTT...GCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCACCCACACACAAAGATTCTTCCAGAGAATCTaGGTTGAATTCCAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: TRDSQYPLLTSWSTHTQRFFQRI*VEFQHT Trigger: TGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAA...TCTTTGTGTGTGGGTGCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGTAATTCCAGCACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCTTTACAGTGTTTCACTaGGTTCAAGACAGAGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: ACNSSTRDSQYPLLTSWSFTVFH*VQDRAM Trigger: CATAGCTCTGTCTTGAACTCAGTGAAACACTGTAAA...GCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGTGCTGGAATTACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTTGCAAGCACCTGTAATTTCAGTTaGAAGGGATCTAATACCGTT | + |
|
Preference number: 2 (lower is better) Translates to: LFFQRIWVEFQHTRWLASTCNFS*KGSNTV Trigger: AACGGTATTAGATCCCTTGCAACTGAAATTACAGGT...GCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGTAATTCCAGCACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCCTCAGTATCTACAAATaGGGCTTGAAAGATGGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: ACNSSTRDSQYPLLTSWSLSIYK*GLKDGL Trigger: TAAACCATCTTTCAAGCCCCATTTGTAGATACTGAG...GCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGTGCTGGAATTACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR GCA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGAAAATGAGGCAGATGTaGAACATAGTTGAGGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: DRQMLATELHTCTALLVEKMRQM*NIVEGN Trigger: ATTTCCCTCAACTATGTTGCACATCTGCCTCATTTT...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTTGCAAGCCTGTGTTGTGAGAATTaGCATTTTCTAGTATCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LFFQRIWVEFQHTRWLASLCCEN*HFLVSH Trigger: ATGTGATACTAGAAAATGGCAATTCTCACAACACAG...GCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR CAA 90 bp | GGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTaGAGTCTTAATGCAAATGAACACAAAACTTCAACAAAGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GKCLPLSYTHVQPCL*SLNANEHKTSTKPE Trigger: TTCTGGCTTTGTTGAAGTTTTGTGTTCATTTGCATTAAGACTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCTATGTGCTGAAGGCATaGACTCCAAAGGGGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KARMYGEEGSFYVFAGNCYVLKA*TPKGEN Trigger: ATTTTCCCCCTTTGGAGTGCATGCCTTCAGCACATA...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAATACAGTGAGTTTCAAGTCAGCCTGGGCCACAGATAAAGGACAAACAGATTCTCAATCTTCCTaGTTGGTTATATGCAATGGT | + |
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Preference number: 2 (lower is better) Translates to: ARNTVSFKSAWATDKGQTDSQSS*LVICNG Trigger: ACCATTGCATATAACCAACCAGGAAGATTGAGAATC...TGTTTGTCCTTTATCTGTGGCCCAGGCTGACTTGAAACTCACTGTATTCCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR CAA 90 bp | ATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTaGTTGAGTCTTAATGCAAATGAACACAAAACTTCAACAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: IGKCLPLSYTHVQPC*LSLNANEHKTSTKP Trigger: TGGCTTTGTTGAAGTTTTGTGTTCATTTGCATTAAGACTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR GCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGTATGTGCTGAAGGCATaGACTCCAAAGGGGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWYVLKA*TPKGEN Trigger: ATTTTCCCCCTTTGGAGTGCATGCCTTCAGCACATA...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCAAAATGAGGCAGATGTaGAACATAGTTGAGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: KARMYGEEGSFYVFAGNCKMRQM*NIVEGN Trigger: ATTTCCCTCAACTATGTTGCACATCTGCCTCATTTT...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCATACACAGAAGATAATTTACAGTGTTTCACTGAGTTCAAGACAGAGCTATAACGAAAAACCTAGGTaGAAGCCACTCATGGTGATA | + |
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Preference number: 2 (lower is better) Translates to: IHTQKIIYSVSLSSRQSYNEKPR*KPLMVI Trigger: TATCACCATGAGTGGCTTCCACCTAGGTTTTTCGTT...ATAGCTCTGTCTTGAACTCAGTGAAACACTGTAAATTATCTTCTGTGTATGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGAACTTTGATTTATACACTCAGTATCTACAAATGGGGCTTGAAAGATGGCTGTGTTGTGAGAATTaGCATTTTCTAGTATCACAT | + |
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Preference number: 2 (lower is better) Translates to: QKNFDLYTQYLQMGLERWLCCEN*HFLVSH Trigger: ATGTGATACTAGAAAATGGCAATTCTCACAACACAG...CCATCTTTCAAGCCCCATTTGTAGATACTGAGTGTATAAATCAAAGTTCTTTTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR TCA 72 bp | CACCTGCCTCAAGTTCCAGGCAAGCCAGGAATACAGTaGGTTTCAAGTCAGCCTGGGCCACAGATAAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: HLPQVPGKPGIQ*VSSQPGPQIKD Trigger: GTCCTTTATCTGTGGCCCAGGCTGACTTGAAACTCACTGTATTCCTGGCTTGCCTGGAACTTGAGGCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR GCA 72 bp | GACACCCTTCTAGCCTCCTTGGGCACCAGGCACATGTaGAGACACATGCGTACAGAAGATCCATACACAGAA | + |
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Preference number: 3 (lower is better) Translates to: DTLLASLGTRHM*RHMRTEDPYTE Trigger: TTCTGTGTATGGATCTTCTGTACGCATGTGTCTGCACATGTGCCTGGTGCCCAAGGAGGCTAGAAGGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CAA 90 bp | GCATGTAATTCCAGCACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCAGGCAGATCTTGAGTTaGAGGTCAGCCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: ACNSSTRDSQYPLLTSWSRQILS*RSAWST Trigger: TGTAGACCAGGCTGACCTCAAACTCAAGATCTGCCT...GCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGTGCTGGAATTACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR TCA 72 bp | GATCACTTTAAGGGAGGGAGGGAGGGCATCCTTCTTTaGGGTCCCATCTGTTTTCATTCACAGGAGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: DHFKGGREGILL*GPICFHSQEER Trigger: TCTCTCCTCCTGTGAATGAAAACAGATGGGACCTCAAAGAAGGATGCCCTCCCTCCCTCCCTTAAAGTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR GCA 72 bp | ATGGTTAAGAGCTCTTGCTGCTCTTCTTGTTGCTCTTaGAGAGGACCCAACATTGGGCAGCTCACACTGCAT | + |
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Preference number: 3 (lower is better) Translates to: MVKSSCCSSCCS*RGPNIGQLTLH Trigger: ATGCAGTGTGAGCTGCCCAATGTTGGGTCCTCTGCAAGAGCAACAAGAAGAGCAGCAAGAGCTCTTAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR TCA 72 bp | TTAAGATCACTGGCTGTTCTTCCAGAGAATCTGGGTTaGATTCCAGCACACACGGTGGCTTGCAAGCATGTG | + |
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Preference number: 3 (lower is better) Translates to: LRSLAVLPENLG*IPAHTVACKHV Trigger: CACATGCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAGCCAGTGATCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR GCA 72 bp | AAACTTGTCAACCCAGAGCCTCTTATGATAGGCAAATaGTTGCCACTGAGCTACACACATGTACAGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: KLVNPEPLMIGK*LPLSYTHVQPC Trigger: GCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATCATAAGAGGCTCTGGGTTGACAAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR GCA 72 bp | ATAGGAATGGTTAAGAGCTCTTGCTGCTCTTCTTGTTaGTCTTGCAGAGGACCCAACATTGGGCAGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: IGMVKSSCCSSC*SCRGPNIGQLT Trigger: TGTGAGCTGCCCAATGTTGGGTCCTCTGCAAGAGCAACAAGAAGAGCAGCAAGAGCTCTTAACCATTCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTTGCATCTCAATCTTCCTGGTaGGTTATATGCAATGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: WLFFQRIWVEFQHTRWLASQSSW*VICNGL Trigger: CAAACCATTGCATATAACCAACCAGGAAGATTGAGA...TGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGTACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGATCTTGAGTTTGAGTCTCAATCTTCCTGGTaGGTTATATGCAATGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: VVHTFYLSTQRQADLEFESQSSW*VICNGL Trigger: CAAACCATTGCATATAACCAACCAGGAAGATTGAGA...CTCAAACTCAAGATCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR GCA 72 bp | GCTATTAACAGAAAAATAGGAATGGTTAAGAGCTCTTaGTGCTCTTCTTGTTGCTCTTGCAGAGGACCCAAC | + |
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Preference number: 3 (lower is better) Translates to: AINRKIGMVKSS*CSSCCSCRGPN Trigger: GTTGGGTCCTCTGCAAGAGCAACAAGAAGAGCAGCAAGAGCTCTTAACCATTCCTATTTTTCTGTTAATAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR CCA 72 bp | GGACAAGTACCACAAAAATGTGGCAGGCTACACACATaGCTTAATCAAATGTTAAGAGCTGTGTATCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GQVPQKCGRLHT*LNQMLRAVYPA Trigger: TGCTGGATACACAGCTCTTAACATTTGATTAAGCCATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR CAA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACGTACAGCCCTGCTTGTaGAGTCTTAATGCAAATGAA | + |
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Preference number: 3 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHVQPCL*SLNANE Trigger: TTCATTTGCATTAAGACTCAACAAGCAGGGCTGTAC...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGAACTTTGATTTATACACTCAGTATCTACAAATGGGGCTTGAAAGATGGGCTTGCAAGCATGTGTaGACTCCAGTTTCAGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QKNFDLYTQYLQMGLERWACKHV*TPVSGD Trigger: ATCCCCTGAAACTGGAGTCAACACATGCTTGCAAGC...CCATCTTTCAAGCCCCATTTGTAGATACTGAGTGTATAAATCAAAGTTCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
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| 3UTR-3UTR CAA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGCATGTACAGCCCTGCTaGTTGAGTCTTAATGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWHVQPC*LSLNAN Trigger: ATTTGCATTAAGACTCAACAAGCAGGGCTGTACATG...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR GCA 72 bp | GGTCCCATCTGTTTTCATTCACAGGAGGAGAGATTTTaGATATGCATATTTCATACAGAATCTCTGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GPICFHSQEERF*ICIFHTESLSS Trigger: AGAGGACAGAGATTCTGTATGAAATATGCATATGCAAAATCTCTCCTCCTGTGAATGAAAACAGATGGGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
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| 3UTR GCA 72 bp | ATTAACAGAAAAATAGGAATGGTTAAGAGCTCTTGCTaGTCTTCTTGTTGCTCTTGCAGAGGACCCAACATT | + |
|
Preference number: 3 (lower is better) Translates to: INRKIGMVKSSC*SSCCSCRGPNI Trigger: AATGTTGGGTCCTCTGCAAGAGCAACAAGAAGAGCAGCAAGAGCTCTTAACCATTCCTATTTTTCTGTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| 3UTR CCA 72 bp | GACAGATTCTCAATCTTCCTGGTTGGTTATATGCAATaGTTTGATTCTTTCCCTATTCTAATAAGCCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DRFSIFLVGYMQ*FDSFPILISPL Trigger: AAGCGGGCTTATTAGAATAGGGAAAGAATCAAACCATTGCATATAACCAACCAGGAAGATTGAGAATCTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| 3UTR CCA 72 bp | TATTTAACCAAGAGCACAATTAACGAAAAACCTAGGTaGAAGCCACTCATGGTGATAAGCAAAACCCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: YLTKSTINEKPR*KPLMVISKTQS Trigger: AGATTGGGTTTTGCTTATCACCATGAGTGGCTTCCACCTAGGTTTTTCGTTAATTGTGCTCTTGGTTAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| 3UTR TCA 72 bp | ATTCTCAATCTTCCTGGTTGGTTATATGCAATGGTTTaGTTCTTTCCCTATTCTAATAAGCCCGCTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILNLPGWLYAMV*FFPYSNKPACV Trigger: AACACAAGCGGGCTTATTAGAATAGGGAAAGAATCAAACCATTGCATATAACCAACCAGGAAGATTGAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| 3UTR CCA 72 bp | TCTTACCTATTTGTGCAGACAGATTCTCAATCTTCCTaGTTGGTTATATGCAATGGTTTGATTCTTTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SYLFVQTDSQSS*LVICNGLILSL Trigger: TAGGGAAAGAATCAAACCATTGCATATAACCAACCAGGAAGATTGAGAATCTGTCTGCACAAATAGGTAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| 3UTR CCA 72 bp | TCATTAGTAGTAATTTCAATATTTCTGACACGTTCATaGGGAAAAAGTCCAGTATTTGATAAGAGGCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: SLVVISIFLTRS*GKSPVFDKRLL Trigger: CAGTAGCCTCTTATCAAATACTGGACTTTTTCCCCATGAACGTGTCAGAAATATTGAAATTACTACTAATGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| 3UTR CAA 72 bp | TCCAGTTTCAGGGGATCTGACACCCTTCTAGCCTCCTaGGGCACCAGGCACATGTGCAGACACATGCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SSFRGSDTLLAS*GTRHMCRHMRT Trigger: TGTACGCATGTGTCTGCACATGTGCCTGGTGCCCAAGGAGGCTAGAAGGGTGTCAGATCCCCTGAAACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCCAGGGGTGGTGGTACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGATCCTCCTCTCGTGCCTaGTGCATATTCTCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KARGGGTHLLSQHSEAGRSSSRA*CIFSSF Trigger: AAAGGAGGAGAATATGCAGCAGGCACGAGAGGAGGA...TCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTACCACCACCCCTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCAAAGACTACACCTGCCTCAAGTTCCAGGCAAGCCAGGAATACAGTGAGTGTTCCTGCTGCACTCTaGATCTTGCTGGCCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAKTTPASSSRQARNTVSVPAAL*ILLAIR Trigger: CCTGATGGCCAGCAAGATTCAGAGTGCAGCAGGAAC...ACTCACTGTATTCCTGGCTTGCCTGGAACTTGAGGCAGGTGTAGTCTTTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | GCATGTAATTCCAGCACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCCTGCACTCTGAATCTTaGTGGCCATCAGGAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ACNSSTRDSQYPLLTSWSLHSES*WPSGGP Trigger: AGGTCCTCCTGATGGCCAGCAAGATTCAGAGTGCAG...GCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGTGCTGGAATTACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCACCCACACACAAAGACTGCACTCTGAATCTTaGTGGCCATCAGGAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TRDSQYPLLTSWSTHTQRLHSES*WPSGGP Trigger: AGGTCCTCCTGATGGCCAGCAAGATTCAGAGTGCAG...TCTTTGTGTGTGGGTGCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATGGGCTGCGTTGCAGGTaGCACCAAGTCCCCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHGLRCR*HQVPIC Trigger: GCAGATGGGGACTTGGTGTCACCTGCAACGCAGCCC...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCCAGGGGTGGTGGTACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGATCTCCTGTCGCAGTTTaGCATTGTGGATGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KARGGGTHLLSQHSEAGRSPVAV*HCGCHV Trigger: AACATGACATCCACAATGCCAAACTGCGACAGGAGA...TCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTACCACCACCCCTGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR TCA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGTCATTTCTCTCTGTCTaGAGAGCCCTGCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRQMLATELHTCTALLVESFLSV*RALHSF Trigger: GAAGCTGTGCAGGGCTCTTCAGACAGAGAGAAATGA...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTGAATTCCAGCACACACGGTGGCTTGCAAGCATGTGTTGACTCCAGTTTCTTCCAGTTTGCTTCTTaGCAAGATGGCCTTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLNSSTHGGLQACVDSSFFQFAS*QDGLAV Trigger: CACAGCAAGGCCATCTTGGCAAGAAGCAAACTGGAA...GAAACTGGAGTCAACACATGCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR CCA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGCACTCTGAATCTTGCTaGCCATCAGGAGGACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DRQMLATELHTCTALLVEHSESC*PSGGPV Trigger: AACAGGTCCTCCTGATGGCCAGCAAGATTCAGAGTG...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| 3UTR CAA 72 bp | CTTGTCAACCCAGAGCCTCTTATGATAGGCAAATGCTaGCCACTGAGCTACACACATGTACAGCCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVNPEPLMIGKC*PLSYTHVQPCL Trigger: CAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATCATAAGAGGCTCTGGGTTGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGTCCTCTCGTGCCTGCTaGATATTCTCCTCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DRQMLATELHTCTALLVESSRAC*IFSSFK Trigger: CTTAAAGGAGGAGAATATGCAGCAGGCACGAGAGGA...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGATCTTGAGTTTGAGCACTCTGAATCTTGCTaGCCATCAGGAGGACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVHTFYLSTQRQADLEFEHSESC*PSGGPV Trigger: AACAGGTCCTCCTGATGGCCAGCAAGATTCAGAGTG...CTCAAACTCAAGATCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAATACAGTGAGTTTCAAGTCAGCCTGGGCCACAGATAAAGGACAAACACACTCTGAATCTTGCTaGCCATCAGGAGGACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARNTVSFKSAWATDKGQTHSESC*PSGGPV Trigger: AACAGGTCCTCCTGATGGCCAGCAAGATTCAGAGTG...TGTTTGTCCTTTATCTGTGGCCCAGGCTGACTTGAAACTCACTGTATTCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| 3UTR CAA 72 bp | TTTATCTCAGCACTCAGAGGCAGGCAGATCTTGAGTTaGAGGTCAGCCTGGTCTACAGAGCAAGTTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FISALRGRQILS*RSAWSTEQVLG Trigger: TCCTAGAACTTGCTCTGTAGACCAGGCTGACCTCAAACTCAAGATCTGCCTGCCTCTGAGTGCTGAGATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| 3UTR CAA 72 bp | GTTAAGATCACTGGCTGTTCTTCCAGAGAATCTGGGTaGAATTCCAGCACACACGGTGGCTTGCAAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VKITGCSSRESG*NSSTHGGLQAC Trigger: ACATGCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAGCCAGTGATCTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR TCA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGTTCTTGAAGTCTCTTTaGAGGAATCCAGGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRQMLATELHTCTALLVEFLKSL*RNPGQH Trigger: GTGCTGTCCTGGATTCCTTCAAAGAGACTTCAAGAA...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTACACACCTTTTATCTCAGCACTCAGAGGCAGGCAGATCTTGAGTTTGAGTCCTCTCGTGCCTGCTaGATATTCTCCTCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VVHTFYLSTQRQADLEFESSRAC*IFSSFK Trigger: CTTAAAGGAGGAGAATATGCAGCAGGCACGAGAGGA...CTCAAACTCAAGATCTGCCTGCCTCTGAGTGCTGAGATAAAAGGTGTGTACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR TCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACGTTCCTGCTGCACTCTaGATCTTGCTGGCCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHVPAAL*ILLAIR Trigger: CCTGATGGCCAGCAAGATTCAGAGTGCAGCAGGAAC...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATCTGCACTCTGAATCTTaGTGGCCATCAGGAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHLHSES*WPSGGP Trigger: AGGTCCTCCTGATGGCCAGCAAGATTCAGAGTGCAG...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGTCTTCTCTTTGTTCCTaGTGCACTCTGAATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DRQMLATELHTCTALLVESSLCS*CTLNLA Trigger: AGCAAGATTCAGAGTGCAGCAGGAACAAAGAGAAGA...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTTGCAAGCAGTTATCTGGAAATGTaGTGTTGCTTCTTTACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFFQRIWVEFQHTRWLASSYLEM*CCFFTS Trigger: CGACGTAAAGAAGCAACAGCACATTTCCAGATAACT...GCTTGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTGTTCTTCCAGAGAATCTGGGTTGAATTCCAGCACACACGGTGGCTTGCAAGTTATCTGGAAATGTaGTGTTGCTTCTTTACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WLFFQRIWVEFQHTRWLASYLEM*CCFFTS Trigger: CGACGTAAAGAAGCAACAGCACATTTCCAGATAACT...TGCAAGCCACCGTGTGTGCTGGAATTCAACCCAGATTCTCTGGAAGAACAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACCTGCACTCTGAATCTTaGTGGCCATCAGGAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHLHSES*WPSGGP Trigger: AGGTCCTCCTGATGGCCAGCAAGATTCAGAGTGCAG...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCTCCTCCTCTCGTGCCTaGTGCATATTCTCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KARMYGEEGSFYVFAGNCSSSRA*CIFSSF Trigger: AAAGGAGGAGAATATGCAGCAGGCACGAGAGGAGGA...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATTCCTCCTCTCGTGCCTaGTGCATATTCTCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHSSSRA*CIFSSF Trigger: AAAGGAGGAGAATATGCAGCAGGCACGAGAGGAGGA...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATCACCAAGTCCCCATCTaGTGCTTTGATAGAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHHQVPI*CFDRDL Trigger: CAGGTCTCTATCAAAGCAGCAGATGGGGACTTGGTG...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | TCACAAAAGACAGGCCTGGGATGTAAGTTAAATGATAAAACATACGTAGCATACGTTCCTGCTGCACTCTaGATCTTGCTGGCCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQKTGLGCKLNDKTYVAYVPAAL*ILLAIR Trigger: CCTGATGGCCAGCAAGATTCAGAGTGCAGCAGGAAC...GTATGCTACGTATGTTTTATCATTTAACTTACATCCCAGGCCTGTCTTTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCCTTCGACCTTCTCGTTaGGCTCATTTCTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KARMYGEEGSFYVFAGNCLRPSR*AHFSLS Trigger: AGACAGAGAGAAATGAGCTCAACGAGAAGGTCGAAG...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATACTGACTCAATGCCTTaGGCAGGAGAACCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHTDSMP*AGEPED Trigger: ATCTTCAGGTTCTCCTGCTCAAGGCATTGAGTCAGT...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATTTCCAGTTTGCTTCTTaGCAAGATGGCCTTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHFQFAS*QDGLAV Trigger: CACAGCAAGGCCATCTTGGCAAGAAGCAAACTGGAA...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATTCCTCTCGTGCCTGCTaGATATTCTCCTCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHSSRAC*IFSSFK Trigger: CTTAAAGGAGGAGAATATGCAGCAGGCACGAGAGGA...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCGCTTTGATAGAGACCTaGTCTTTCAGGACTTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: KARMYGEEGSFYVFAGNCALIET*SFRTST Trigger: GGTCGAAGTCCTGAAAGAGCAGGTCTCTATCAAAGC...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACAGCTGTGTTGTTTGCTaGAGTTTGGCATCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHSCVVC*SLASTS Trigger: GCTTGTGGATGCCAAACTTCAGCAAACAACACAGCT...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGTCATTTCTCTCTGTCTaGAGAGCCCTGCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWSFLSV*RALHSF Trigger: GAAGCTGTGCAGGGCTCTTCAGACAGAGAGAAATGA...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATTCCCAGGGTTCTTCTTaGAGTCTCTTTGAAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHSQGSS*SLFEGI Trigger: GATTCCTTCAAAGAGACTTCAAGAAGAACCCTGGGA...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGCACCAAGTCCCCATCTaGTGCTTTGATAGAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWHQVPI*CFDRDL Trigger: CAGGTCTCTATCAAAGCAGCAGATGGGGACTTGGTG...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGCACTCTGAATCTTGCTaGCCATCAGGAGGACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWHSESC*PSGGPV Trigger: AACAGGTCCTCCTGATGGCCAGCAAGATTCAGAGTG...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| 3UTR CAA 72 bp | TGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTaGTTGAGTCTTAATGCAAATGAACACAAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPLSYTHVQPC*LSLNANEHKTS Trigger: TGAAGTTTTGTGTTCATTTGCATTAAGACTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGCTTCGACCTTCTCGTTaGGCTCATTTCTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWLRPSR*AHFSLS Trigger: AGACAGAGAGAAATGAGCTCAACGAGAAGGTCGAAG...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACTCCCAGGGTTCTTCTTaGAGTCTCTTTGAAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHSQGSS*SLFEGI Trigger: GATTCCTTCAAAGAGACTTCAAGAAGAACCCTGGGA...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGACTGACTCAATGCCTTaGGCAGGAGAACCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWTDSMP*AGEPED Trigger: ATCTTCAGGTTCTCCTGCTCAAGGCATTGAGTCAGT...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGTTCCAGTTTGCTTCTTaGCAAGATGGCCTTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWFQFAS*QDGLAV Trigger: CACAGCAAGGCCATCTTGGCAAGAAGCAAACTGGAA...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGGCTTTGATAGAGACCTaGTCTTTCAGGACTTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWALIET*SFRTST Trigger: GGTCGAAGTCCTGAAAGAGCAGGTCTCTATCAAAGC...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| 3UTR CAA 72 bp | TTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTaGAGTCTTAATGCAAATGAACACAAAACTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSYTHVQPCL*SLNANEHKTST Trigger: TGTTGAAGTTTTGTGTTCATTTGCATTAAGACTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCCTGTGTACAGAATACTaGGCTCACCAAATTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KARMYGEEGSFYVFAGNCLCTEY*AHQISV Trigger: AACAGAAATTTGGTGAGCTCAGTATTCTGTACACAG...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041370.11 |
||
| CDS-3UTR GCA 90 bp | AGTGTTTCACTGAGTTCAAGACAGAGCTATGAACATGACTTAGCAATTAAATACTCCTCCTCTCGTGCCTaGTGCATATTCTCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSLSSRQSYEHDLAIKYSSSRA*CIFSSF Trigger: AAAGGAGGAGAATATGCAGCAGGCACGAGAGGAGGA...GTATTTAATTGCTAAGTCATGTTCATAGCTCTGTCTTGAACTCAGTGAAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCAGTTATCTGGAAATGTaGTGTTGCTTCTTTACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KARMYGEEGSFYVFAGNCSYLEM*CCFFTS Trigger: CGACGTAAAGAAGCAACAGCACATTTCCAGATAACT...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATTTCTCTTCGGCCATCTaGAGAAGTGCTTTATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHFSSAI*RSALLL Trigger: CAATAATAAAGCACTTCTGCAGATGGCCGAAGAGAA...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGTCTCCTGTCGCAGTTTaGCATTGTGGATGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWSPVAV*HCGCHV Trigger: AACATGACATCCACAATGCCAAACTGCGACAGGAGA...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | ATCCATACACAGAAGATAATTTACAGTGTTTCACTGAGTTCAAGACAGAGCTATTTCCAGTTTGCTTCTTaGCAAGATGGCCTTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHTQKIIYSVSLSSRQSYFQFAS*QDGLAV Trigger: CACAGCAAGGCCATCTTGGCAAGAAGCAAACTGGAA...ATAGCTCTGTCTTGAACTCAGTGAAACACTGTAAATTATCTTCTGTGTATGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTTCACTGAGTTCAAGACAGAGCTATGAACATGACTTAGCAATTAAATACTCCTCTCGTGCCTGCTaGATATTCTCCTCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVSLSSRQSYEHDLAIKYSSRAC*IFSSFK Trigger: CTTAAAGGAGGAGAATATGCAGCAGGCACGAGAGGA...GTATTTAATTGCTAAGTCATGTTCATAGCTCTGTCTTGAACTCAGTGAAACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACAGTTATCTGGAAATGTaGTGTTGCTTCTTTACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHSYLEM*CCFFTS Trigger: CGACGTAAAGAAGCAACAGCACATTTCCAGATAACT...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR TCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACTCATGTTGTTCCAACTaGGCTTGGATTTCATTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHSCCSN*AWISFR Trigger: TCTAAATGAAATCCAAGCTCAGTTGGAACAACATGA...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGAATGTATGGTGAGGAAGGGAGCTTTTATGTTTTTGCTGGAAACTGCATCTTTTCCATTTCCTaGCTGAAGGTTGTAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KARMYGEEGSFYVFAGNCIFSIS*LKVVKS Trigger: ACTTTTTACAACCTTCAGGCAGGAAATGGAAAAGAT...GCAGTTTCCAGCAAAAACATAAAAGCTCCCTTCCTCACCATACATTCTGGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR GCA 90 bp | TATGTAAACAATCTGCCAAGTTTTCCCAAGCTGGTTCCAGTGTTTTTACTTTGGTTCTCTTCGGCCATCTaGAGAAGTGCTTTATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: YVNNLPSFPKLVPVFLLWFSSAI*RSALLL Trigger: CAATAATAAAGCACTTCTGCAGATGGCCGAAGAGAA...CCAAAGTAAAAACACTGGAACCAGCTTGGGAAAACTTGGCAGATTGTTTACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CCA 90 bp | ATCCATACACAGAAGATAATTTACAGTGTTTCACTGAGTTCAAGACAGAGCTATTCTCCTGTCGCAGTTTaGCATTGTGGATGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHTQKIIYSVSLSSRQSYSPVAV*HCGCHV Trigger: AACATGACATCCACAATGCCAAACTGCGACAGGAGA...ATAGCTCTGTCTTGAACTCAGTGAAACACTGTAAATTATCTTCTGTGTATGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR GCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACATCTTTTCCATTTCCTaGCTGAAGGTTGTAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHIFSIS*LKVVKS Trigger: ACTTTTTACAACCTTCAGGCAGGAAATGGAAAAGAT...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CCA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACTCATTTAGAGTTATCTaGAAATGTGCTGTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHSFRVI*KCAVAS Trigger: AGAAGCAACAGCACATTTCCAGATAACTCTAAATGA...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | TCTGACACCCTTCTAGCCTCCTTGGGCACCAGGCACATGTGCAGACACATGCGTTTCTCCTGTCGCAGTTaGGCATTGTGGATGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SDTLLASLGTRHMCRHMRFSCRS*ALWMSC Trigger: ACATGACATCCACAATGCCAAACTGCGACAGGAGAA...ACGCATGTGTCTGCACATGTGCCTGGTGCCCAAGGAGGCTAGAAGGGTGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS GCA 90 bp | GTTGCAGGTGACACCAAGTCCCCATCTGCTGCTTTGATAGAGACCTaGTCTTTCAGGACTTCGACCTTCTCGTTGAGCTCATTTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAGDTKSPSAALIET*SFRTSTFSLSSFLS Trigger: AGAGAGAAATGAGCTCAACGAGAAGGTCGAAGTCCTGAAAGAGCAGGTCTCTATCAAAGCAGCAGATGGGGACTTGGTGTCACCTGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGACTTCGACCTTCTCGTaGAGCTCATTTCTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DRQMLATELHTCTALLVETSTFS*SSFLSV Trigger: GACAGAGAGAAATGAGCTCAACGAGAAGGTCGAAGT...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCACCCACACACAAAGATCTGGAAATGTGCTGTaGCTTCTTTACGTCGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRDSQYPLLTSWSTHTQRSGNVL*LLYVVL Trigger: AAGAACGACGTAAAGAAGCAACAGCACATTTCCAGA...TCTTTGTGTGTGGGTGCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACTCCCAATATCCTCTTCTGACCTCTTGGAGCACCCACACACAAAGAATTTTCTCCTGTCGCAGTTaGGCATTGTGGATGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RDSQYPLLTSWSTHTQRIFSCRS*ALWMSC Trigger: ACATGACATCCACAATGCCAAACTGCGACAGGAGAA...AATTCTTTGTGTGTGGGTGCTCCAAGAGGTCAGAAGAGGATATTGGGAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR CAA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGGGCATCCACAAGCTGTaGTTGCAATTCCTTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DRQMLATELHTCTALLVEGIHKL*LQFLVF Trigger: AAACACAAGGAATTGCAACAACAGCTTGTGGATGCC...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGTCTGGAAATGTGCTGTaGCTTCTTTACGTCGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DRQMLATELHTCTALLVESGNVL*LLYVVL Trigger: AAGAACGACGTAAAGAAGCAACAGCACATTTCCAGA...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | GATAGGCAAATGCTTGCCACTGAGCTACACACATGTACAGCCCTGCTTGTTGAGATTGTGGATGTCATGTaGTTCCAACTGAGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DRQMLATELHTCTALLVEIVDVM*FQLSLD Trigger: ATCCAAGCTCAGTTGGAACAACATGACATCCACAAT...CTCAACAAGCAGGGCTGTACATGTGTGTAGCTCAGTGGCAAGCATTTGCCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATTTCTCCTGTCGCAGTTaGGCATTGTGGATGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHFSCRS*ALWMSC Trigger: ACATGACATCCACAATGCCAAACTGCGACAGGAGAA...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGCTTGAAAGATGGTTTAGTGGTTAAGATCACTGGCTGTTCTTCCAGAGAATCTGGAAATGTGCTGTaGCTTCTTTACGTCGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WGLKDGLVVKITGCSSRESGNVL*LLYVVL Trigger: AAGAACGACGTAAAGAAGCAACAGCACATTTCCAGA...TTCTCTGGAAGAACAGCCAGTGATCTTAACCACTAAACCATCTTTCAAGCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112314.8 ENSMUST00000112315.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATGGCATCCACAAGCTGTaGTTGCAATTCCTTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHGIHKL*LQFLVF Trigger: AAACACAAGGAATTGCAACAACAGCTTGTGGATGCC...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | AAATATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACTTCGACCTTCTCGTaGAGCTCATTTCTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KYAIFHTGQVPQKCGRLHTSTFS*SSFLSV Trigger: GACAGAGAGAAATGAGCTCAACGAGAAGGTCGAAGT...GTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS-3UTR CAA 90 bp | ATGCAATATTCCACACAGGACAAGTACCACAAAAATGTGGCAGGCTACACACATTCTGGAAATGTGCTGTaGCTTCTTTACGTCGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MQYSTQDKYHKNVAGYTHSGNVL*LLYVVL Trigger: AAGAACGACGTAAAGAAGCAACAGCACATTTCCAGA...ATGTGTGTAGCCTGCCACATTTTTGTGGTACTTGTCCTGTGTGGAATATTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS CAA 90 bp | GCACAGGGCTGCGTTGCAGGTGACACCAAGTCCCCATCTGCTGCTTaGATAGAGACCTGCTCTTTCAGGACTTCGACCTTCTCGTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQGCVAGDTKSPSAA*IETCSFRTSTFSLS Trigger: GCTCAACGAGAAGGTCGAAGTCCTGAAAGAGCAGGTCTCTATCAAAGCAGCAGATGGGGACTTGGTGTCACCTGCAACGCAGCCCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS GCA 72 bp | GAAGTCTCTTTGAAGGAATCCAGGACAGCACAGGGCTaGGTTGCAGGTGACACCAAGTCCCCATCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EVSLKESRTAQG*VAGDTKSPSAA Trigger: AGCAGCAGATGGGGACTTGGTGTCACCTGCAACGCAGCCCTGTGCTGTCCTGGATTCCTTCAAAGAGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS CAA 90 bp | GCTCTAGCCTCCAAGTGCATTCCCAGGGTTCTTCTTGAAGTCTCTTaGAAGGAATCCAGGACAGCACAGGGCTGCGTTGCAGGTGACACC | + |
|
Preference number: 6 (lower is better) Translates to: ALASKCIPRVLLEVS*KESRTAQGCVAGDT Trigger: GGTGTCACCTGCAACGCAGCCCTGTGCTGTCCTGGATTCCTTCAAAGAGACTTCAAGAAGAACCCTGGGAATGCACTTGGAGGCTAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS TCA 72 bp | CCAAGTGCATTCCCAGGGTTCTTCTTGAAGTCTCTTTaGAGGAATCCAGGACAGCACAGGGCTGCGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSAFPGFFLKSL*RNPGQHRAALQ Trigger: CTGCAACGCAGCCCTGTGCTGTCCTGGATTCCTTCAAAGAGACTTCAAGAAGAACCCTGGGAATGCACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS CAA 72 bp | TGCGTTGCAGGTGACACCAAGTCCCCATCTGCTGCTTaGATAGAGACCTGCTCTTTCAGGACTTCGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CVAGDTKSPSAA*IETCSFRTSTF Trigger: GAAGGTCGAAGTCCTGAAAGAGCAGGTCTCTATCAAAGCAGCAGATGGGGACTTGGTGTCACCTGCAACGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS CAA 72 bp | TCCAAGTGCATTCCCAGGGTTCTTCTTGAAGTCTCTTaGAAGGAATCCAGGACAGCACAGGGCTGCGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SKCIPRVLLEVS*KESRTAQGCVA Trigger: TGCAACGCAGCCCTGTGCTGTCCTGGATTCCTTCAAAGAGACTTCAAGAAGAACCCTGGGAATGCACTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041370.11 ENSMUST00000112316.9 |
||
| CDS TCA 72 bp | CTTTGTAATAAAGTCACTGCCTTCATCCCCTTCCAGTaGATGTTTCTTAGTTGTGCCACCACAACTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LCNKVTAFIPFQ*MFLSCATTTGV Trigger: GACCCCAGTTGTGGTGGCACAACTAAGAAACATTCACTGGAAGGGGATGAAGGCAGTGACTTTATTACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041370.11 |
||