Pregenerated sensors for TXLNB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039891Ensembl transcript IDs: ENSMUST00000037964.7
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCCAGCTCCTCGTGTGCATTGGCAAGCAGCCACGTGCACCACTaGAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATC | + |
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Preference number: 1 (lower is better) Translates to: PPSSSCALASSHVHH*RVISWMSFQESSFI Trigger: GATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGCACGTGGCTGCTTGCCAATGCACACGAGGAGCTGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 90 bp | GGATGTCAGTGCCTCCTGCCTGTTTGTCTTCCTAAGCTCTTGGATTaGGACCTAACTGTGATGATCCTACTCTGTTCTTTGAAGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: GCQCLLPVCLPKLLD*DLTVMILLCSLKLS Trigger: GCTGAGCTTCAAAGAACAGAGTAGGATCATCACAGTTAGGTCTCAATCCAAGAGCTTAGGAAGACAAACAGGCAGGAGGCACTGACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 90 bp | TGTTGCTGTGAAACCCTCTTGGATGAAAATAATAAACTTTGGATATaGGAACACTTAATTTATTGGATGTCAGTGCCTCCTGCCTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: CCCETLLDENNKLWI*EHLIYWMSVPPACL Trigger: CAAACAGGCAGGAGGCACTGACATCCAATAAATTAAGTGTTCTCATATCCAAAGTTTATTATTTTCATCCAAGAGGGTTTCACAGCAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR TCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCACCTCAACCCAGGAGGTaGTGCTGGGAAGTTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: APLKSDFLDEFSRILLYPPQPRR*CWEVGR Trigger: CCTCCCAACTTCCCAGCATCACCTCCTGGGTTGAGG...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGAAGTTGGGAGGAAGTTaGCTGAGAAGATCAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRKLGGS*LRRSEA Trigger: TGCTTCTGATCTTCTCAGCCAACTTCCTCCCAACTT...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR CAA 90 bp | TCTCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTaGAGCCTAGGCAGAGCATTTTATGCTGCCAGTGTTATTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: SPSFPPLPVLLVQFS*SLGRAFYAASVIRG Trigger: ACCTCTAATAACACTGGCAGCATAAAATGCTCTGCCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR CCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCAGTTAAAAGCCTCTTGTaGTCCTCTTTGTGTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: APLKSDFLDEFSRILLYPVKSLL*SSLCPG Trigger: GCCTGGACACAAAGAGGACCACAAGAGGCTTTTAAC...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR TCA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGGAAGATGCAGTCAGGTaGGCAGCCAGAAGAATCAAC | + |
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Preference number: 2 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKEDAVR*AARRIN Trigger: GTTGATTCTTCTGGCTGCTCACCTGACTGCATCTTC...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGCAAATCTTACTTAGGTaGTTTCTCTATTTCCAACCA | + |
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Preference number: 2 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRQILLR*FLYFQP Trigger: TGGTTGGAAATAGAGAAAGCACCTAAGTAAGATTTG...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR TCA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCACAGACTTTCTTCTGTaGGGAAGATGCAGTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFTDFLL*GRCSQV Trigger: CACCTGACTGCATCTTCCTCACAGAAGAAAGTCTGT...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR CCA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGAACAGCAGCAAAGACTaGAAGTGTTCTGTACAACTT | + |
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Preference number: 2 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKNSSKD*KCSVQL Trigger: AAGTTGTACAGAACACTTCCAGTCTTTGCTGCTGTT...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR CAA 90 bp | ACAGCAGCAAAGACTGGAAGTGTTCTGTACAACTTTAAAAATGTCTaGACTCTAACTCTTCCTAGTCCTAGAAGTTTCTTTCACAGACTT | + |
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Preference number: 2 (lower is better) Translates to: TAAKTGSVLYNFKNV*TLTLPSPRSFFHRL Trigger: AAGTCTGTGAAAGAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAGAACACTTCCAGTCTTTGCTGCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 72 bp | CAGGTAGCCAGGAGGCGGCTGCCTCAACCCAGGAGGTaGTGCTGGGAAGTTGGGAGGAAGTTGGCTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: QVARRRLPQPRR*CWEVGRKLAEK Trigger: CTTCTCAGCCAACTTCCTCCCAACTTCCCAGCATCACCTCCTGGGTTGAGGCAGCCGCCTCCTGGCTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 72 bp | TCCTCGTGTGCATTGGCAAGCAGCCACGTGCACCACTaGAGAGTGATTTCCTGGATGAGTTTTCAAGAATCC | + |
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Preference number: 3 (lower is better) Translates to: SSCALASSHVHH*RVISWMSFQES Trigger: GGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGCACGTGGCTGCTTGCCAATGCACACGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR GCA 72 bp | TTATACAGTTTTATAATTCCTTCAACATATGGCTACTaGCTCCCAGCTCCTCGTGTGCATTGGCAAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LYSFIIPSTYGY*LPAPRVHWQAA Trigger: GGCTGCTTGCCAATGCACACGAGGAGCTGGGAGGCAGTAGCCATATGTTGAAGGAATTATAAAACTGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR CAA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTGGTGATGCTGGGAAGTaGGGAGGAAGTTGGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: VFANNESIKLVWVIPSASGDAGK*GGSWLR Trigger: TCTCAGCCAACTTCCTCCCAACTTCCCAGCATCACC...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTTTTCTTGAGATATCAGTAGTCAAAGAGGCTGAGACCTCTAAGCTGAGGTCTGTTAAAAGCCTCTaGTGGTCCTCTTTGTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: KCFLEISVVKEAETSKLRSVKSL*WSSLCP Trigger: TGGACACAAAGAGGACCACAAGAGGCTTTTAACAGA...CCTCAGCTTAGAGGTCTCAGCCTCTTTGACTACTGATATCTCAAGAAAACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR GCA 72 bp | ATGAGAACACTTAATTTATTGGATGTCAGTGCCTCCTaGCTGTTTGTCTTCCTAAGCTCTTGGATTGAGACC | + |
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Preference number: 3 (lower is better) Translates to: MRTLNLLDVSAS*LFVFLSSWIET Trigger: GGTCTCAATCCAAGAGCTTAGGAAGACAAACAGGCAGGAGGCACTGACATCCAATAAATTAAGTGTTCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 72 bp | TTAACATTAATTGAGATGTGGGCCAGGCACACACATTaGCGCAAAGGAGGAAATTTGGAAGGAATAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: LTLIEMWARHTH*RKGGNLEGIDA Trigger: AGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTGTGCCTGGCCCACATCTCAATTAATGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 72 bp | GCTGGATACCCGTGTGGTTATAATATGCAAAGCCTCTaGAAACACATGGGTTCTCAAATAATGGCATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: AGYPCGYNMQSL*KHMGSQIMACF Trigger: AAAGCATGCCATTATTTGAGAACCCATGTGTTTTCAGAGGCTTTGCATATTATAACCACACGGGTATCCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR CAA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCTTGCTATTGATGTGTTaGGCTGCCAAATCACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: KTCLGNPKCFLLLTSMESLLLMC*AAKSQR Trigger: TCTCTGTGATTTGGCAGCCAAACACATCAATAGCAA...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR-3UTR CAA 90 bp | AGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGACAATGTCAGAGACAACAGAAGTTGGGAGGAAGTaGGCTGAGAAGATCAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: RKFGRNRCFEIKTMSETTEVGRK*AEKIRS Trigger: GCTTCTGATCTTCTCAGCCAACTTCCTCCCAACTTC...TGTTGTCTCTGACATTGTCTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 72 bp | AAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTaGCATCTATGGAGTCCTTGCCTGTTATTTTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: KLVWVIPSASCF*HLWSPCLLFLN Trigger: ATTCAAAAATAACAGGCAAGGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR TCA 72 bp | CACCAATGTAATGGGAAAGTAATGTATATTTGCTATTaGTGTGTTTGGCTGCCAAATCACAGAGAATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: HQCNGKVMYICY*CVWLPNHREFP Trigger: TGGAAATTCTCTGTGATTTGGCAGCCAAACACATCAATAGCAAATATACATTACTTTCCCATTACATTGGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| 3UTR CAA 72 bp | GGCGGCTGCCTCAACCCAGGAGGTGATGCTGGGAAGTaGGGAGGAAGTTGGCTGAGAAGATCAGAAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: GGCLNPGGDAGK*GGSWLRRSEAP Trigger: AGGTGCTTCTGATCTTCTCAGCCAACTTCCTCCCAACTTCCCAGCATCACCTCCTGGGTTGAGGCAGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR TCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCACCCTCCGCCACAGCCTaGGCACCTACAGGGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPPSATA*APTGGR Trigger: TCGGCCCCCTGTAGGTGCTCAGGCTGTGGCGGAGGG...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGTCTTGCTCTGGCGCTTaGCCTGAGGTTGAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRSCSGA*PEVEHR Trigger: GCGGTGCTCAACCTCAGGCCAAGCGCCAGAGCAAGA...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGAGAGACGCTTGGCTCTaGCTCTTCCTCAGAGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRRDAWL*LFLRGA Trigger: CGCACCTCTGAGGAAGAGCCAGAGCCAAGCGTCTCT...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCAACAGATAGGGAGCCCTaGGCTGGGGACAGTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPTDREP*AGDSGA Trigger: GGCCCCACTGTCCCCAGCCCAGGGCTCCCTATCTGT...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGATGATGTCTTCCAGTTaGCTGCTCAACTCTTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRMMSSS*LLNSSA Trigger: CGCGGAAGAGTTGAGCAGGCAACTGGAAGACATCAT...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGTCCTTCTCCCGTCTGTaGCGCTCCTCTGCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKSFSRL*RSSASC Trigger: GCAGGAGGCAGAGGAGCGGCACAGACGGGAGAAGGA...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGCTGAAGTTTCCACTCTaGCGCCTGGTTCAGCAAATA | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRLKFPL*RLVQQI Trigger: TATTTGCTGAACCAGGCGGCAGAGTGGAAACTTCAG...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | AAGTGTTTTCTTGAGATATCAGTAGTCAAAGAGGCTGAGACCTCTAAGCTGAGGATCGGGCTTTCCACGTaGCGGTGTCCTTCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KCFLEISVVKEAETSKLRIGLST*RCPSPA Trigger: AGCTGGAGAAGGACACCGCCACGTGGAAAGCCCGAT...CCTCAGCTTAGAGGTCTCAGCCTCTTTGACTACTGATATCTCAAGAAAACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | AAGTGTTTTCTTGAGATATCAGTAGTCAAAGAGGCTGAGACCTCTAAGCTGAGGGTCTGTGACTTCTGGTaGGGGCTGCTCCCTAGACTC | + |
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Preference number: 4 (lower is better) Translates to: KCFLEISVVKEAETSKLRVCDFW*GLLPRL Trigger: GAGTCTAGGGAGCAGCCCCCACCAGAAGTCACAGAC...CCTCAGCTTAGAGGTCTCAGCCTCTTTGACTACTGATATCTCAAGAAAACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR TCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCATCCTCAGAGGTGCGCTaGACCTGGTCTTCCTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPSSEVR*TWSSFS Trigger: CGAAAAGGAAGACCAGGTTCAGCGCACCTCTGAGGA...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR TCA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCCGGGGTGCTGGTGGGTaGCATCACTTCCACTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KTCLGNPKCFLLLTSMESRGAGG*HHFHFE Trigger: CTCAAAGTGGAAGTGATGTCACCCACCAGCACCCCG...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR TCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCATCTGCAGGGAGACCCTaGCTTTGTAGCTCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPSAGRP*LCSSAS Trigger: AGAGGCAGAGCTACAAAGTCAGGGTCTCCCTGCAGA...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGTCCACCAGCTTCTGCTaGAGTTCTCGATGTTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRSTSFC*SSRCLN Trigger: ATTCAAACATCGAGAACTGCAGCAGAAGCTGGTGGA...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCAGCTCTTCCTCAGAGGTaGGCTGAACCTGGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPALPQR*AEPGLP Trigger: AGGAAGACCAGGTTCAGCGCACCTCTGAGGAAGAGC...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTGACAGGCTCTTTGGCTaGGGCTGGCTCTTCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VFANNESIKLVWVIPSASDRLFG*GWLFRS Trigger: GCTCCTGAAGAGCCAGCCGCAGCCAAAGAGCCTGTC...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGAAGCTTTTCTTCAGGTaGTTGCAGCTTGTTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRKLFFR*LQLVQV Trigger: AACCTGAACAAGCTGCAAGCACCTGAAGAAAAGCTT...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR GCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCAACCCGGGGTATTTTCTaGAGGGAGACCCTGACTTTG | + |
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Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPTRGIF*RETLTL Trigger: CAAAGTCAGGGTCTCCCTGCAGAAAATACCCCGGGT...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCATGGTGCCTCTGTGTTTaGGGGCTGCTCCTTAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPWCLCV*GLLLSF Trigger: GAAACTAAGGAGCAGCCCCCAAACACAGAGGCACCA...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGTCTCTGAGCTCGTACTaGTCAATGATGCTTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRSLSSY*SMMLFS Trigger: ACTGAAAAGCATCATTGACCAGTACGAGCTCAGAGA...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGAGGTTCTCCAGCCTTTaGATTTTCATCACGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRRFSSL*IFITKH Trigger: GTGTTTCGTGATGAAAATCCAAAGGCTGGAGAACCT...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR TCA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCTTTCCCGGGCCGTTTTaGTTGAGTGATGAGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KTCLGNPKCFLLLTSMESFPGPF*LSDELS Trigger: GGACAGCTCATCACTCAATCAAAACGGCCCGGGAAA...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS-3UTR TCA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTTTCCTGAGTAGAGAGTaGGCTGAGCCTGCAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VFANNESIKLVWVIPSASFLSRE*AEPAAP Trigger: CGGTGCTGCAGGCTCAGCTCACTCTCTACTCAGGAA...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | AGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGACAATGTCAGAGACAACACTACGGGGATGTCTGTaGCTTCTGGTGGGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKFGRNRCFEIKTMSETTLRGCL*LLVGAA Trigger: AGCAGCCCCCACCAGAAGTCACAGACATCCCCGTAG...TGTTGTCTCTGACATTGTCTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCATTCCGTTGGTTGGTCTaGGGTGAACTCTGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPFRWLV*GELWMM Trigger: CATCATCCAGAGTTCACCCCAGACCAACCAACGGAA...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCCTGGGCTGGGGACAGTaGGGCCTGACCAGAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFLGWGQ*GLTRSV Trigger: AACACTTCTGGTCAGGCCCCACTGTCCCCAGCCCAG...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| 3UTR CAA 72 bp | TTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTaGAGCCTAGGCAGAGCATTTTATGCTGCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPPLPVLLVQFS*SLGRAFYAASV Trigger: AACACTGGCAGCATAAAATGCTCTGCCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGTTTGAAAGTGACTTGTaGTCTCTTTCCTCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRFESDL*SLSSSL Trigger: AAGAGAAGAGGAAAGAGATCACAAGTCACTTTCAAA...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGATCCTCATTGTCTGGTaGCTCTGTGTTTGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKILIVW*LCVWGL Trigger: CAGCCCCCAAACACAGAGGCACCAGACAATGAGGAT...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGTTCTCTCTCTGGGTCTaGGCCTGCTGTTTCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKFSLWV*ACCFSR Trigger: CCTACTGAAACAGCAGGCGCAGACCCAGAGAGAGAA...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCAACATCCTCATTGTCTaGTGCCTCTGTGTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTCLGNPKCFLLLTSMESNILIV*CLCVWG Trigger: CCCCCAAACACAGAGGCACCAGACAATGAGGATGTT...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCATTCCACTCTGCCGCCTaGTTCAGCAAATATTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPFHSAA*FSKYSF Trigger: GAAGGAATATTTGCTGAACCAGGCGGCAGAGTGGAA...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| 3UTR CAA 72 bp | TTTCCCCTTTCTGTTAAAAGCCTCTTGTGGTCCTCTTaGTGTCCAGGCATTGTAGCACATGTGCTATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLSVKSLLWSS*CPGIVAHVLFL Trigger: CAGAAATAGCACATGTGCTACAATGCCTGGACACAAAGAGGACCACAAGAGGCTTTTAACAGAAAGGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGACATCACTTCCACTTTaGGGACCATTCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKTSLPL*GPFTAS Trigger: GCTGGCAGTGAATGGTCCTCAAAGTGGAAGTGATGT...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCTCTGTGCCGCTCCTCTaGCTCCTGCATCAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFSVPLL*LLHQFL Trigger: CAAGAACTGATGCAGGAGGCAGAGGAGCGGCACAGA...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCACTGTTGGCTTCCTCTaGGTCCACCTCTTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTCLGNPKCFLLLTSMESTVGFL*VHLFIF Trigger: GAAAATGAAGAGGTGGACGCAGAGGAAGCCAACAGT...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCCTGACCAGAAGTGTTTaGCTCTGGTTTATGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTCLGNPKCFLLLTSMESLTRSV*LWFMGL Trigger: AAGCCCCATAAACCAGAGGCAAACACTTCTGGTCAG...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTCTGTTGTGCTCACTCTaGAACTGGTCCTTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFANNESIKLVWVIPSASLLCSL*NWSFSL Trigger: GAGAGAGAAGGACCAGTTGCAGAGTGAGCACAACAG...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTAGCTCTGTGTTCTCCTaGCAGAGCTTCATATTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VFANNESIKLVWVIPSASSSVFS*QSFILR Trigger: GCGCAATATGAAGCTCTGCCAGGAGAACACAGAGCT...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTCTCTGTTGTTCGATCTaGGTCTGGATATCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFANNESIKLVWVIPSASLCCSI*VWISVR Trigger: CCTGACAGATATCCAGACTCAGATCGAACAACAGAG...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCATTTTCCACAGCTTTTTaGAAACTGTTGGCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: APLKSDFLDEFSRILLYPFSTAF*KLLASS Trigger: AGAGGAAGCCAACAGTTTTCAAAAAGCTGTGGAAAA...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCGCATCCACCAGCTTCTaGTGCAGTTCTCGATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFASTSF*CSSRCL Trigger: CAAACATCGAGAACTGCAGCAGAAGCTGGTGGATGC...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCGCTCCTTCAGCACTTTaGCCTGAAGTTTCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFAPSAL*PEVSTL Trigger: CAGAGTGGAAACTTCAGGCCAAAGTGCTGAAGGAGC...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCAGCTTGTTCAGGTTTTaGATGAGCAAGTTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTCLGNPKCFLLLTSMESSLFRF*MSKLAS Trigger: AGAAGCTAACTTGCTCATGCAAAACCTGAACAAGCT...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTGCTCGTACTGGTCAATaGTGCTTTTCAGTTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFANNESIKLVWVIPSASARTGQ*CFSVFL Trigger: CAGAAAAACTGAAAAGCATCATTGACCAGTACGAGC...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGGCAGTTCTCGATGTTTaGATATTTTGTCCAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKAVLDV*IFCPDA Trigger: AGCATCTGGACAAAATATTCAAACATCGAGAACTGC...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | AGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGACAATGTCAGAGACAACACTTTTTGAAAACTGTTaGCTTCCTCTGCGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RKFGRNRCFEIKTMSETTLFENC*LPLRPP Trigger: AGGTGGACGCAGAGGAAGCCAACAGTTTTCAAAAAG...TGTTGTCTCTGACATTGTCTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| 3UTR CAA 72 bp | GAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTaGCTTTTGACATCTATGGAGTCCTTGCCTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: EYKTCLGNPKCF*LLTSMESLPVI Trigger: AATAACAGGCAAGGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTTATACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | AGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGACAATGTCAGAGACAACATTTTCTTCAGGTGCTTaGAGCTTGTTCAGGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKFGRNRCFEIKTMSETTFSSGA*SLFRFC Trigger: GCAAAACCTGAACAAGCTGCAAGCACCTGAAGAAAA...TGTTGTCTCTGACATTGTCTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTGTCTTATCCATTTCCTaGTTGAAAGTGGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: VFANNESIKLVWVIPSASVLSIS*LKVANT Trigger: AGTGTTTGCCACTTTCAAGCAGGAAATGGATAAGAC...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| 3UTR CAA 72 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTaGACATCTATGGAGTCCTTGCCTGTTATTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTCLGNPKCFLL*TSMESLPVIFE Trigger: TTCAAAAATAACAGGCAAGGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | AGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGACAATGTCAGAGACAACATATCCATTTCCTGCTTaGAAGTGGCAAACACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKFGRNRCFEIKTMSETTYPFPA*KWQTLH Trigger: ATGAAGTGTTTGCCACTTTCAAGCAGGAAATGGATA...TGTTGTCTCTGACATTGTCTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR TCA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCACTCTCTGGAGATGGTaGAATATCATATTTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFTLWRW*NIIFCL Trigger: GAGGCAAAATATGATATTTCACCATCTCCAGAGAGT...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR GCA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCTGGCAAACACTTCATTaGTTTTTGTCAGTGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFWQTLH*FLSVYS Trigger: AGAGTACACTGACAAAAAGCAATGAAGTGTTTGCCA...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| 3UTR CAA 72 bp | AAGACTGGAAGTGTTCTGTACAACTTTAAAAATGTCTaGACTCTAACTCTTCCTAGTCCTAGAAGTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTGSVLYNFKNV*TLTLPSPRSFF Trigger: AAAGAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAGAACACTTCCAGTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CCA 90 bp | AGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGACAATGTCAGAGACAACATGTCTATCTCTTCAGTaGTTTCTTCATAGTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RKFGRNRCFEIKTMSETTCLSLQ*FLHSQH Trigger: ATGTTGACTATGAAGAAACCACTGAAGAGATAGACA...TGTTGTCTCTGACATTGTCTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 90 bp | CCTACAGGGGGCCGAGGACTCCCTGAATCAGCGGGAAGGCTGGGATaGTTTAAACGGGCTGTTTCGGGGTGCTGGTGGGTGACATCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PTGGRGLPESAGRLG*FKRAVSGCWWVTSL Trigger: AAGTGATGTCACCCACCAGCACCCCGAAACAGCCCGTTTAAACCATCCCAGCCTTCCCGCTGATTCAGGGAGTCCTCGGCCCCCTGTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | TCCTCGCGCGCCCGTTGGAGGGTTTCTTCCTTCAGCGTCTTGTTGTaGCTCTGTAGCTCCCGACACAGACTCTCGAGTTTGCTTCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRARWRVSSFSVLL*LCSSRHRLSSLLRA Trigger: TGCTCGAAGCAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGCGCGCGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | CACCGTCTCCTGCTCCTTCAGCACTTTGGCCTGAAGTTTCCACTCTaGCGCCTGGTTCAGCAAATATTCCTTCTCCCGTCTGTGCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRLLLLQHFGLKFPL*RLVQQIFLLPSVPL Trigger: GAGCGGCACAGACGGGAGAAGGAATATTTGCTGAACCAGGCGGCAGAGTGGAAACTTCAGGCCAAAGTGCTGAAGGAGCAGGAGACGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 90 bp | CTTATGATGTCTTCCAGTTGCCTGCTCAACTCTTCCGCGACATCATaGGCTCCCTTCTCGGGATGCAGGCTTCCCTCTTGCTCTGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LMMSSSCLLNSSATS*APFSGCRLPSCSGA Trigger: AGCGCCAGAGCAAGAGGGAAGCCTGCATCCCGAGAAGGGAGCCCATGATGTCGCGGAAGAGTTGAGCAGGCAACTGGAAGACATCATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | GCGTCTTGTTGTGCCTCTGTAGCTCCCGACACAGACTCTCGAGTTTaGTTCGAGCAAGGACGGCTCTGTTGTGCTCACTCTGCAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASCCASVAPDTDSRV*FEQGRLCCAHSATG Trigger: ACCAGTTGCAGAGTGAGCACAACAGAGCCGTCCTTGCTCGAAGCAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 90 bp | AGTTTGCTTCGAGCAAGGACGGCTCTGTTGTGCTCACTCTGCAACTaGTCCTTCTCTCTCTGGGTCTGCGCCTGCTGTTTCAGTAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLRARTALLCSLCN*SFSLWVCACCFSRS Trigger: GCTCCTACTGAAACAGCAGGCGCAGACCCAGAGAGAGAAGGACCAGTTGCAGAGTGAGCACAACAGAGCCGTCCTTGCTCGAAGCAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | CGCCTGGTTCAGCAAATATTCCTTCTCCCGTCTGTGCCGCTCCTCTaGCTCCTGCATCAGTTCTTGAGCCTCTTCAAGTTTCGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLVQQIFLLPSVPLL*LLHQFLSLFKFRIH Trigger: GTGGATGCGAAACTTGAAGAGGCTCAAGAACTGATGCAGGAGGCAGAGGAGCGGCACAGACGGGAGAAGGAATATTTGCTGAACCAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 90 bp | GGTTTCTTCATAGTCAACATCCTCATTGTCTGGTGCCTCTGTGTTTaGGGGCTGCTCCTTAGTTTCAGAGGTGCTCTCCTTCCCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFFIVNILIVWCLCV*GLLLSFRGALLPSG Trigger: CCCCGAGGGAAGGAGAGCACCTCTGAAACTAAGGAGCAGCCCCCAAACACAGAGGCACCAGACAATGAGGATGTTGACTATGAAGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGCACAGACTCTCGAGTTaGCTTCGAGCAAGGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRHRLSS*LRARTA Trigger: AGCCGTCCTTGCTCGAAGCAAACTCGAGAGTCTGTG...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGCTGTCTTTCCGTTGGTaGGTCTGGGGTGAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRLSFRW*VWGELW Trigger: CCAGAGTTCACCCCAGACCAACCAACGGAAAGACAG...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 90 bp | ACTTTGAGGACCATTCACTGCCAGCTGTCTTTCCGTTGGTTGGTCTaGGGTGAACTCTGGATGATGAAGGATGGTAAAAGCTGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLRTIHCQLSFRWLV*GELWMMKDGKSCGQ Trigger: CTGGCCACAGCTTTTACCATCCTTCATCATCCAGAGTTCACCCCAGACCAACCAACGGAAAGACAGCTGGCAGTGAATGGTCCTCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | TATCTCTTCAGTGGTTTCTTCATAGTCAACATCCTCATTGTCTGGTaGCTCTGTGTTTGGGGGCTGCTCCTTAGTTTCAGAGGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YLFSGFFIVNILIVW*LCVWGLLLSFRGAL Trigger: GAGAGCACCTCTGAAACTAAGGAGCAGCCCCCAAACACAGAGGCACCAGACAATGAGGATGTTGACTATGAAGAAACCACTGAAGAGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | TCAGTTTTTCTGCAAGCTCTGTGTTCTCCTGGCAGAGCTTCATATTaGGCTCACTCTGTTGTTCGATCTGAGTCTGGATATCTGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVFLQALCSPGRASY*AHSVVRSESGYLSG Trigger: CCCTGACAGATATCCAGACTCAGATCGAACAACAGAGTGAGCGCAATATGAAGCTCTGCCAGGAGAACACAGAGCTTGCAGAAAAACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | CTCCTCTCTGAGCTCGTACTGGTCAATGATGCTTTTCAGTTTTTCTaGAAGCTCTGTGTTCTCCTGGCAGAGCTTCATATTGCGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLSELVLVNDAFQFF*KLCVLLAELHIALT Trigger: AGTGAGCGCAATATGAAGCTCTGCCAGGAGAACACAGAGCTTGCAGAAAAACTGAAAAGCATCATTGACCAGTACGAGCTCAGAGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 90 bp | GTCTATCTCTTCAGTGGTTTCTTCATAGTCAACATCCTCATTGTCTaGTGCCTCTGTGTTTGGGGGCTGCTCCTTAGTTTCAGAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VYLFSGFFIVNILIV*CLCVWGLLLSFRGA Trigger: AGCACCTCTGAAACTAAGGAGCAGCCCCCAAACACAGAGGCACCAGACAATGAGGATGTTGACTATGAAGAAACCACTGAAGAGATAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGTCCCCTGGGGGAGTaGGGTGCTCCACTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VFANNESIKLVWVIPSASCPLGE*GAPLRA Trigger: AGCTCTCAGTGGAGCACCCAACTCCCCCAGGGGACA...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGAGCTTTTGCTCTTTATaGCTGACAGGCTCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRSFCSL*LTGSLA Trigger: AGCCAAAGAGCCTGTCAGCAATAAAGAGCAAAAGCT...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 90 bp | CTCTGGGTCTGCGCCTGCTGTTTCAGTAGGAGCTTCAGTTTCTTTTaGTCGGTGCGATGTTCATCCAGCAATTCAGTATACTTCTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LWVCACCFSRSFSFF*SVRCSSSNSVYFLN Trigger: ATTCAAGAAGTATACTGAATTGCTGGATGAACATCGCACCGAGCAAAAGAAACTGAAGCTCCTACTGAAACAGCAGGCGCAGACCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 90 bp | TCCTTTCTCTCCTCTTGTAAAGCACGACACAGGTTCTCCAGCCTTTaGATTTTCATCACGAAACACTCGTATTCTTTAGCTCGCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFLSSCKARHRFSSL*IFITKHSYSLARRA Trigger: AGCCCTGCGAGCTAAAGAATACGAGTGTTTCGTGATGAAAATCCAAAGGCTGGAGAACCTGTGTCGTGCTTTACAAGAGGAGAGAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCGCACCGCTCGCCATCTaGCTTTCCCGGGCCGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFAPLAI*LSRAVL Trigger: CAAAACGGCCCGGGAAAGCAAGATGGCGAGCGGTGC...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTTTCCTCGCGCGCCCGTaGGAGGGTTTCTTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFANNESIKLVWVIPSASFLARP*EGFFLQ Trigger: CTGAAGGAAGAAACCCTCCAACGGGCGCGCGAGGAA...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTTCCCACCTCTCCCTGTTCTGTTAGTACAGTTTTCTTTGAGCCTAGGATCTGTCAGGGTAGTTaGAAAGTGACTTGTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLPTSPCSVSTVFFEPRICQGS*KVTCDL Trigger: GAGATCACAAGTCACTTTCAAACTACCCTGACAGAT...CCTAGGCTCAAAGAAAACTGTACTAACAGAACAGGGAGAGGTGGGAAGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | AAGTGTTTTCTTGAGATATCAGTAGTCAAAGAGGCTGAGACCTCTAAGCTGAGGCCTGACCAGAAGTGTTaGCCTCTGGTTTATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KCFLEISVVKEAETSKLRPDQKC*PLVYGA Trigger: AGCCCCATAAACCAGAGGCAAACACTTCTGGTCAGG...CCTCAGCTTAGAGGTCTCAGCCTCTTTGACTACTGATATCTCAAGAAAACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | GCACCACTGAAGAGTGATTTCCTGGATGAGTTTTCAAGAATCCTCCTTTATCCATGGCAGAGCTTCATATaGCGCTCACTCTGTTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: APLKSDFLDEFSRILLYPWQSFI*RSLCCS Trigger: CGAACAACAGAGTGAGCGCAATATGAAGCTCTGCCA...TGGATAAAGGAGGATTCTTGAAAACTCATCCAGGAAATCACTCTTCAGTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGCGAACAATGAGAGTATAAAACTTGTTTGGGTAATCCCAAGTGCTTCTCATTTTCAGAGACGCTaGGCTCTGGCTCTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFANNESIKLVWVIPSASHFQRR*ALALPQ Trigger: CTGAGGAAGAGCCAGAGCCAAGCGTCTCTGAAAATG...AGAAGCACTTGGGATTACCCAAACAAGTTTTATACTCTCATTGTTCGCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | CACACATTGACGCAAAGGAGGAAATTTGGAAGGAATAGATGCTTTGAGATAAAGGAGCTTCAGTTTCTTTaGCTCGGTGCGATGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HTLTQRRKFGRNRCFEIKELQFL*LGAMFI Trigger: GATGAACATCGCACCGAGCAAAAGAAACTGAAGCTC...CTTTATCTCAAAGCATCTATTCCTTCCAAATTTCCTCCTTTGCGTCAATGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCCAGGTTCTCCAGCCTTaGGATTTTCATCACGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: KTCLGNPKCFLLLTSMESQVLQP*DFHHET Trigger: TGTTTCGTGATGAAAATCCAAAGGCTGGAGAACCTG...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCTCAGGTGCTTGCAGCTaGTTCAGGTTTTGCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFSGACS*FRFCMS Trigger: GCTCATGCAAAACCTGAACAAGCTGCAAGCACCTGA...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | AAGTGTTTTCTTGAGATATCAGTAGTCAAAGAGGCTGAGACCTCTAAGCTGAGGTGCAGTTCTCGATGTTaGAATATTTTGTCCAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: KCFLEISVVKEAETSKLRCSSRC*NILSRC Trigger: GCATCTGGACAAAATATTCAAACATCGAGAACTGCA...CCTCAGCTTAGAGGTCTCAGCCTCTTTGACTACTGATATCTCAAGAAAACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | AAAACTTGTTTGGGTAATCCCAAGTGCTTCTTGCTTTTGACATCTATGGAGTCCATGTCCAACAGGGCTTaGTTACAATTCTCAAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: KTCLGNPKCFLLLTSMESMSNRA*LQFSNR Trigger: CCGATTTGAGAATTGTAACAAAGCCCTGTTGGACAT...GGACTCCATAGATGTCAAAAGCAAGAAGCACTTGGGATTACCCAAACAAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | AAGTGTTTTCTTGAGATATCAGTAGTCAAAGAGGCTGAGACCTCTAAGCTGAGGGTGAAATATCATATTTaGCCTCTACTACAGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KCFLEISVVKEAETSKLRVKYHI*PLLQIG Trigger: CCCTATCTGTAGTAGAGGCAAAATATGATATTTCAC...CCTCAGCTTAGAGGTCTCAGCCTCTTTGACTACTGATATCTCAAGAAAACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS-3UTR CAA 90 bp | CTGTACAACTTTAAAAATGTCTTGACTCTAACTCTTCCTAGTCCTAGAAGTTTCGTGGCAAACACTTCATaGCTTTTTGTCAGTGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LYNFKNVLTLTLPSPRSFVANTS*LFVSVL Trigger: GAGTACACTGACAAAAAGCAATGAAGTGTTTGCCAC...GAAACTTCTAGGACTAGGAAGAGTTAGAGTCAAGACATTTTTAAAGTTGTACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | GCAGGCTTCCCTCTTGCTCTGGCGCTTGGCCTGAGGTaGAGCACCGCTCGCCATCTTGCTTTCCCGGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AGFPLALALGLR*STARHLAFPGR Trigger: ACGGCCCGGGAAAGCAAGATGGCGAGCGGTGCTCAACCTCAGGCCAAGCGCCAGAGCAAGAGGGAAGCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 72 bp | GGGCCTACGGGGATGTCTGTGACTTCTGGTGGGGGCTaGTCCCTAGACTCACAGCCGGGCACCACAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GPTGMSVTSGGG*SLDSQPGTTAE Trigger: TTCTGCTGTGGTGCCCGGCTGTGAGTCTAGGGAGCAGCCCCCACCAGAAGTCACAGACATCCCCGTAGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | AGTGGAAGGGCCTACGGGGATGTCTGTGACTTCTGGTaGGGGCTGCTCCCTAGACTCACAGCCGGGCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGRAYGDVCDFW*GLLPRLTAGHH Trigger: GTGGTGCCCGGCTGTGAGTCTAGGGAGCAGCCCCCACCAGAAGTCACAGACATCCCCGTAGGCCCTTCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | TCCAGTGGAAGGGCCTACGGGGATGTCTGTGACTTCTaGTGGGGGCTGCTCCCTAGACTCACAGCCGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSGRAYGDVCDF*WGLLPRLTAGH Trigger: GTGCCCGGCTGTGAGTCTAGGGAGCAGCCCCCACCAGAAGTCACAGACATCCCCGTAGGCCCTTCCACTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | GGCCGAGGACTCCCTGAATCAGCGGGAAGGCTGGGATaGTTTAAACGGGCTGTTTCGGGGTGCTGGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRGLPESAGRLG*FKRAVSGCWWV Trigger: CACCCACCAGCACCCCGAAACAGCCCGTTTAAACCATCCCAGCCTTCCCGCTGATTCAGGGAGTCCTCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | CAGGGGGCCGAGGACTCCCTGAATCAGCGGGAAGGCTaGGATGGTTTAAACGGGCTGTTTCGGGGTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGAEDSLNQREG*DGLNGLFRGAG Trigger: ACCAGCACCCCGAAACAGCCCGTTTAAACCATCCCAGCCTTCCCGCTGATTCAGGGAGTCCTCGGCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | GAGCCTGCAGCACCGTCTCCTGCTCCTTCAGCACTTTaGCCTGAAGTTTCCACTCTGCCGCCTGGTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EPAAPSPAPSAL*PEVSTLPPGSA Trigger: TGCTGAACCAGGCGGCAGAGTGGAAACTTCAGGCCAAAGTGCTGAAGGAGCAGGAGACGGTGCTGCAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | TCGCGCGCCCGTTGGAGGGTTTCTTCCTTCAGCGTCTaGTTGTGCCTCTGTAGCTCCCGACACAGACTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SRARWRVSSFSV*LCLCSSRHRLS Trigger: CGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGCGCGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | TCTTCCAGTTGCCTGCTCAACTCTTCCGCGACATCATaGGCTCCCTTCTCGGGATGCAGGCTTCCCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCLLNSSATS*APFSGCRLPSC Trigger: GCAAGAGGGAAGCCTGCATCCCGAGAAGGGAGCCCATGATGTCGCGGAAGAGTTGAGCAGGCAACTGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | CGCGCCCGTTGGAGGGTTTCTTCCTTCAGCGTCTTGTaGTGCCTCTGTAGCTCCCGACACAGACTCTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RARWRVSSFSVL*CLCSSRHRLSS Trigger: ACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 90 bp | TCTTCCTCGCGCGCCCGTTGGAGGGTTTCTTCCTTCAGCGTCTTGTaGTGCCTCTGTAGCTCCCGACACAGACTCTCGAGTTTGCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSRARWRVSSFSVL*CLCSSRHRLSSLLR Trigger: TCGAAGCAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGCGCGCGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 90 bp | AGCGTCTTGTTGTGCCTCTGTAGCTCCCGACACAGACTCTCGAGTTaGCTTCGAGCAAGGACGGCTCTGTTGTGCTCACTCTGCAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVLLCLCSSRHRLSS*LRARTALLCSLCNW Trigger: CCAGTTGCAGAGTGAGCACAACAGAGCCGTCCTTGCTCGAAGCAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 90 bp | TCTTCTTCCTCGCGCGCCCGTTGGAGGGTTTCTTCCTTCAGCGTCTaGTTGTGCCTCTGTAGCTCCCGACACAGACTCTCGAGTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSRARWRVSSFSV*LCLCSSRHRLSSLL Trigger: AAGCAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGCGCGCGAGGAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 72 bp | ACATCCTCATTGTCTGGTGCCTCTGTGTTTGGGGGCTaGTCCTTAGTTTCAGAGGTGCTCTCCTTCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSLSGASVFGG*SLVSEVLSFPR Trigger: CCGAGGGAAGGAGAGCACCTCTGAAACTAAGGAGCAGCCCCCAAACACAGAGGCACCAGACAATGAGGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 72 bp | TGTGCCTCTGTAGCTCCCGACACAGACTCTCGAGTTTaGTTCGAGCAAGGACGGCTCTGTTGTGCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CASVAPDTDSRV*FEQGRLCCAHS Trigger: AGAGTGAGCACAACAGAGCCGTCCTTGCTCGAAGCAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 72 bp | GCCCGTTGGAGGGTTTCTTCCTTCAGCGTCTTGTTGTaGCTCTGTAGCTCCCGACACAGACTCTCGAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ARWRVSSFSVLL*LCSSRHRLSSL Trigger: CAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | TGCGTCCACCTCTTCATTTTCAGAGACGCTTGGCTCTaGCTCTTCCTCAGAGGTGCGCTGAACCTGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CVHLFIFRDAWL*LFLRGALNLVF Trigger: GAAGACCAGGTTCAGCGCACCTCTGAGGAAGAGCCAGAGCCAAGCGTCTCTGAAAATGAAGAGGTGGACGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | TTGTGCCTCTGTAGCTCCCGACACAGACTCTCGAGTTaGCTTCGAGCAAGGACGGCTCTGTTGTGCTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LCLCSSRHRLSS*LRARTALLCSL Trigger: GAGTGAGCACAACAGAGCCGTCCTTGCTCGAAGCAAACTCGAGAGTCTGTGTCGGGAGCTACAGAGGCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | ATCTCTTTCCTCTTCTCTTCTTCCTCGCGCGCCCGTTaGAGGGTTTCTTCCTTCAGCGTCTTGTTGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ISFLFSSSSRAR*RVSSFSVLLCL Trigger: GAGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGCGCGCGAGGAAGAAGAGAAGAGGAAAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | GATCTCTTTCCTCTTCTCTTCTTCCTCGCGCGCCCGTaGGAGGGTTTCTTCCTTCAGCGTCTTGTTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DLFPLLFFLARP*EGFFLQRLVVP Trigger: AGGCACAACAAGACGCTGAAGGAAGAAACCCTCCAACGGGCGCGCGAGGAAGAAGAGAAGAGGAAAGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | TGTTTCGGGGTGCTGGTGGGTGACATCACTTCCACTTaGAGGACCATTCACTGCCAGCTGTCTTTCCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CFGVLVGDITST*RTIHCQLSFRW Trigger: CCAACGGAAAGACAGCTGGCAGTGAATGGTCCTCAAAGTGGAAGTGATGTCACCCACCAGCACCCCGAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS TCA 72 bp | GATGGTTTAAACGGGCTGTTTCGGGGTGCTGGTGGGTaGCATCACTTCCACTTTGAGGACCATTCACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DGLNGLFRGAGG*HHFHFEDHSLP Trigger: TGGCAGTGAATGGTCCTCAAAGTGGAAGTGATGTCACCCACCAGCACCCCGAAACAGCCCGTTTAAACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | CAGGCTCTTTGGCTGCGGCTGGCTCTTCAGGAGCAGTaGGTTCTCTGTCTATCTCTTCAGTGGTTTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QALWLRLALQEQ*VLCLSLQWFLH Trigger: ATGAAGAAACCACTGAAGAGATAGACAGAGAACCCACTGCTCCTGAAGAGCCAGCCGCAGCCAAAGAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 90 bp | CAGCAGAATCTCCCTCACTCTCTGGAGATGGTGAAATATCATATTTaGCCTCTACTACAGATAGGGAGCCCTGGGCTGGGGACAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QQNLPHSLEMVKYHI*PLLQIGSPGLGTVG Trigger: CCCCACTGTCCCCAGCCCAGGGCTCCCTATCTGTAGTAGAGGCAAAATATGATATTTCACCATCTCCAGAGAGTGAGGGAGATTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 72 bp | CAGCAAATATTCCTTCTCCCGTCTGTGCCGCTCCTCTaGCTCCTGCATCAGTTCTTGAGCCTCTTCAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QQIFLLPSVPLL*LLHQFLSLFKF Trigger: AAACTTGAAGAGGCTCAAGAACTGATGCAGGAGGCAGAGGAGCGGCACAGACGGGAGAAGGAATATTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | CGCAGGGCTTTCTCTTCGATCATGTCCAACAGGGCTTaGTTACAATTCTCAAATCGGGCTTTCCACGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRAFSSIMSNRA*LQFSNRAFHVA Trigger: CGCCACGTGGAAAGCCCGATTTGAGAATTGTAACAAAGCCCTGTTGGACATGATCGAAGAGAAAGCCCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 90 bp | TCTTTAGCTCGCAGGGCTTTCTCTTCGATCATGTCCAACAGGGCTTaGTTACAATTCTCAAATCGGGCTTTCCACGTGGCGGTGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLARRAFSSIMSNRA*LQFSNRAFHVAVSF Trigger: GAAGGACACCGCCACGTGGAAAGCCCGATTTGAGAATTGTAACAAAGCCCTGTTGGACATGATCGAAGAGAAAGCCCTGCGAGCTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CCA 72 bp | ACTTTGAGGACCATTCACTGCCAGCTGTCTTTCCGTTaGTTGGTCTGGGGTGAACTCTGGATGATGAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TLRTIHCQLSFR*LVWGELWMMKD Trigger: ATCCTTCATCATCCAGAGTTCACCCCAGACCAACCAACGGAAAGACAGCTGGCAGTGAATGGTCCTCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS GCA 72 bp | CTGCAAGCTCTGTGTTCTCCTGGCAGAGCTTCATATTaGGCTCACTCTGTTGTTCGATCTGAGTCTGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: LQALCSPGRASY*AHSVVRSESGY Trigger: ATATCCAGACTCAGATCGAACAACAGAGTGAGCGCAATATGAAGCTCTGCCAGGAGAACACAGAGCTTGCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
||
| CDS CAA 72 bp | GTTCTCCTGGCAGAGCTTCATATTGCGCTCACTCTGTaGTTCGATCTGAGTCTGGATATCTGTCAGGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: VLLAELHIALTL*FDLSLDICQGS Trigger: ACTACCCTGACAGATATCCAGACTCAGATCGAACAACAGAGTGAGCGCAATATGAAGCTCTGCCAGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS CAA 90 bp | AAGCTCTGTGTTCTCCTGGCAGAGCTTCATATTGCGCTCACTCTGTaGTTCGATCTGAGTCTGGATATCTGTCAGGGTAGTTTGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: KLCVLLAELHIALTL*FDLSLDICQGSLKV Trigger: CACTTTCAAACTACCCTGACAGATATCCAGACTCAGATCGAACAACAGAGTGAGCGCAATATGAAGCTCTGCCAGGAGAACACAGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS GCA 72 bp | AGTGGTTTCTTCATAGTCAACATCCTCATTGTCTGGTaGCTCTGTGTTTGGGGGCTGCTCCTTAGTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGFFIVNILIVW*LCVWGLLLSFR Trigger: TCTGAAACTAAGGAGCAGCCCCCAAACACAGAGGCACCAGACAATGAGGATGTTGACTATGAAGAAACCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS GCA 72 bp | TGCGCCTGCTGTTTCAGTAGGAGCTTCAGTTTCTTTTaGTCGGTGCGATGTTCATCCAGCAATTCAGTATAC | + |
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Preference number: 6 (lower is better) Translates to: CACCFSRSFSFF*SVRCSSSNSVY Trigger: GTATACTGAATTGCTGGATGAACATCGCACCGAGCAAAAGAAACTGAAGCTCCTACTGAAACAGCAGGCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS CCA 72 bp | TTCAGTGGTTTCTTCATAGTCAACATCCTCATTGTCTaGTGCCTCTGTGTTTGGGGGCTGCTCCTTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSGFFIVNILIV*CLCVWGLLLSF Trigger: GAAACTAAGGAGCAGCCCCCAAACACAGAGGCACCAGACAATGAGGATGTTGACTATGAAGAAACCACTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS CAA 72 bp | ACCAGCTTCTGCTGCAGTTCTCGATGTTTGAATATTTaGTCCAGATGCTCCTCTCTGAGCTCGTACTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TSFCCSSRCLNI*SRCSSLSSYWS Trigger: TGACCAGTACGAGCTCAGAGAGGAGCATCTGGACAAAATATTCAAACATCGAGAACTGCAGCAGAAGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS CAA 90 bp | CTCACTCTGTTGTTCGATCTGAGTCTGGATATCTGTCAGGGTAGTTaGAAAGTGACTTGTGATCTCTTTCCTCTTCTCTTCTTCCTCGCG | + |
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Preference number: 6 (lower is better) Translates to: LTLLFDLSLDICQGS*KVTCDLFPLLFFLA Trigger: CGCGAGGAAGAAGAGAAGAGGAAAGAGATCACAAGTCACTTTCAAACTACCCTGACAGATATCCAGACTCAGATCGAACAACAGAGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS CCA 72 bp | TCCTCTTGTAAAGCACGACACAGGTTCTCCAGCCTTTaGATTTTCATCACGAAACACTCGTATTCTTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSCKARHRFSSL*IFITKHSYSLA Trigger: AGCTAAAGAATACGAGTGTTTCGTGATGAAAATCCAAAGGCTGGAGAACCTGTGTCGTGCTTTACAAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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| CDS CAA 72 bp | TTGTTCGATCTGAGTCTGGATATCTGTCAGGGTAGTTaGAAAGTGACTTGTGATCTCTTTCCTCTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LFDLSLDICQGS*KVTCDLFPLLF Trigger: GAAGAGAAGAGGAAAGAGATCACAAGTCACTTTCAAACTACCCTGACAGATATCCAGACTCAGATCGAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037964.7 |
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