Pregenerated sensors for TXLNA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053841Ensembl transcript IDs: ENSMUST00000046425.16, ENSMUST00000084264.12, ENSMUST00000130017.2, ENSMUST00000132217.8, ENSMUST00000133803.8, ENSMUST00000154105.8
Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GTCCGACGGCCTCAGCCCTGGGCTGCTCCGTGTGGAAGCCTTGCATaGACGAGGCCTGACTGGGCTGCTGCTCCTGTCCCAGCATGCCCA | + |
Preference number: 1 (lower is better) Translates to: VRRPQPWAAPCGSLA*TRPDWAAAPVPACP Trigger: TGGGCATGCTGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGGCTGAGGCCGTCGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 90 bp | AGCGACACTGGCCTGGACCTGGCACTATCGGAGGAGAAGTGGGCCTaGGGGATTCCCTCCCACACAGGCACACCTCCACTTCTGCCCCAC | + |
Preference number: 1 (lower is better) Translates to: SDTGLDLALSEEKWA*GIPSHTGTPPLLPH Trigger: GTGGGGCAGAAGTGGAGGTGTGCCTGTGTGGGAGGGAATCCCTCAGGCCCACTTCTCCTCCGATAGTGCCAGGTCCAGGCCAGTGTCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 90 bp | GGGCAGGAGCCAAGAAACGACCATGCGCCAAGGGGCACGTGGGCCTaGGGTCCAGCAAAGGCTGCATGGAGAAGTGATGGGAACCAGTGG | + |
Preference number: 1 (lower is better) Translates to: GQEPRNDHAPRGTWA*GPAKAAWRSDGNQW Trigger: CCACTGGTTCCCATCACTTCTCCATGCAGCCTTTGCTGGACCGCAGGCCCACGTGCCCCTTGGCGCATGGTCGTTTCTTGGCTCCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 90 bp | TGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTaGCCTGCCACACTGAGACCCAGCAGCTGTCACCCTGCACAAGCT | + |
Preference number: 1 (lower is better) Translates to: CPGCLQVDGGKAKVL*PATLRPSSCHPAQA Trigger: AGCTTGTGCAGGGTGACAGCTGCTGGGTCTCAGTGTGGCAGGCCAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 90 bp | ATCTTCCCAAGCAGGATACCTTGGCACCCACATGGCAAAGGACCCTaGCAGGGTGGTTCCAAGTGGGGTACTGGAGGCCAGGCACCTGAG | + |
Preference number: 1 (lower is better) Translates to: IFPSRIPWHPHGKGP*QGGSKWGTGGQAPE Trigger: CTCAGGTGCCTGGCCTCCAGTACCCCACTTGGAACCACCCTGTCAGGGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGGGAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 90 bp | TCCAGGGCAGCGAGGGAGGGACGAGAGCCCAAATCGCCCAAGTTCTaGTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTTTCACTTGTC | + |
Preference number: 1 (lower is better) Translates to: SRAAREGREPKSPKF*SQKGGVQAWVLSLV Trigger: GACAAGTGAAAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCTCCCTCGCTGCCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 90 bp | AACCCACAAAATTCACAATTGCCAAGTGTCCGACGGCCTCAGCCCTaGGCTGCTCCGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGG | + |
Preference number: 1 (lower is better) Translates to: NPQNSQLPSVRRPQP*AAPCGSLAWTRPDW Trigger: CCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGGCTGAGGCCGTCGGACACTTGGCAATTGTGAATTTTGTGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 90 bp | GCACGCCTGCCCATCCATGTAAGACTAACCCACAAAATTCACAATTaGCAAGTGTCCGACGGCCTCAGCCCTGGGCTGCTCCGTGTGGAA | + |
Preference number: 1 (lower is better) Translates to: ARLPIHVRLTHKIHN*QVSDGLSPGLLRVE Trigger: TTCCACACGGAGCAGCCCAGGGCTGAGGCCGTCGGACACTTGGCAATTGTGAATTTTGTGGGTTAGTCTTACATGGATGGGCAGGCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 90 bp | TGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGGCCTaGCACACTGAGACCCAGCAGCTGTCACCCTGCACAAGCTTTAAG | + |
Preference number: 1 (lower is better) Translates to: WVPTSGWRESQGSLA*HTETQQLSPCTSFK Trigger: CTTAAAGCTTGTGCAGGGTGACAGCTGCTGGGTCTCAGTGTGGCAGGCCAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 90 bp | GCCCTCTCACAGACAGGCAGCCTCCCTGAAGCTGGCCCAGTCTCCTaGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATAT | + |
Preference number: 1 (lower is better) Translates to: ALSQTGSLPEAGPVS*ADFGKQSSCSDCRY Trigger: ATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGACTGGGCCAGCTTCAGGGAGGCTGCCTGTCTGTGAGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 90 bp | GGGGAGAAGGTAGAAGGGAGAGATTACTATCTGCATTGCCCTGGGTaGCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGGCCTGCC | + |
Preference number: 1 (lower is better) Translates to: GEKVEGRDYYLHCPG*LQVDGGKAKVLWPA Trigger: GGCAGGCCAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTCTCCCTTCTACCTTCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 90 bp | GTTCGAAGGAAATGGCACAAGAGCAGTCCTCAAAAACCACACCTCTaGGATGGAGGTGAGGGGCAGGAGCCAAGAAACGACCATGCGCCA | + |
Preference number: 1 (lower is better) Translates to: VRRKWHKSSPQKPHL*DGGEGQEPRNDHAP Trigger: TGGCGCATGGTCGTTTCTTGGCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGTGCCATTTCCTTCGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 90 bp | CCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTaGCTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAG | + |
Preference number: 1 (lower is better) Translates to: PQLPRRSLQKSCCGN*LNTLAGVQSRELQQ Trigger: CTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 90 bp | CAGAGGGGAGAAGGTAGAAGGGAGAGATTACTATCTGCATTGCCCTaGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGGCC | + |
Preference number: 1 (lower is better) Translates to: QRGEGRRERLLSALP*VPTSGWRESQGSLA Trigger: GGCCAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTCTCCCTTCTACCTTCTCCCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 90 bp | TTGTGCAGGCTAGAGGCACCTGTGAATGATAAGGCTACTGAGAACTaGGAAGCGACACTGGCCTGGACCTGGCACTATCGGAGGAGAAGT | + |
Preference number: 1 (lower is better) Translates to: LCRLEAPVNDKATEN*EATLAWTWHYRRRS Trigger: ACTTCTCCTCCGATAGTGCCAGGTCCAGGCCAGTGTCGCTTCTCAGTTCTCAGTAGCCTTATCATTCACAGGTGCCTCTAGCCTGCACAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 90 bp | CTGAGACCCAGCAGCTGTCACCCTGCACAAGCTTTAAGAGGTAGCTaGAGTGAGGCAAGCCAATGTAGTGGACCACACAAGGTCCTTCTG | + |
Preference number: 1 (lower is better) Translates to: LRPSSCHPAQALRGS*SEASQCSGPHKVLL Trigger: CAGAAGGACCTTGTGTGGTCCACTACATTGGCTTGCCTCACTTCAGCTACCTCTTAAAGCTTGTGCAGGGTGACAGCTGCTGGGTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 90 bp | ATGGTCAGAGGGGAGAAGGTAGAAGGGAGAGATTACTATCTGCATTaGCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTC | + |
Preference number: 1 (lower is better) Translates to: MVRGEKVEGRDYYLH*PGCLQVDGGKAKVL Trigger: GAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTCTCCCTTCTACCTTCTCCCCTCTGACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 90 bp | GATATAAGACCTTGGGAGAAATTCCACAGGACAACAGATTCCAGCTaGAGATGGCAAAGCCTCAACACACAGCTGCTGGGCACCCTGAGT | + |
Preference number: 1 (lower is better) Translates to: DIRPWEKFHRTTDSS*RWQSLNTQLLGTLS Trigger: ACTCAGGGTGCCCAGCAGCTGTGTGTTGAGGCTTTGCCATCTCCAGCTGGAATCTGTTGTCCTGTGGAATTTCTCCCAAGGTCTTATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 90 bp | GGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCAGGAAGAAGTaGAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCGAAGGAA | + |
Preference number: 1 (lower is better) Translates to: GMSVLDLPASLGRKK*NPKDSLFGQEGSKE Trigger: TTCCTTCGAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GGGACTTGCCCAAGTGAGGAAGGCGCTGGCCCTCTCACAGACAGGCAGCCTCCCCGACGGCCTCAGCCCTaGGCTGCTCCGTGTGGAAGC | + |
Preference number: 2 (lower is better) Translates to: GTCPSEEGAGPLTDRQPPRRPQP*AAPCGS Trigger: GCTTCCACACGGAGCAGCCCAGGGCTGAGGCCGTCG...GGGAGGCTGCCTGTCTGTGAGAGGGCCAGCGCCTTCCTCACTTGGGCAAGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 90 bp | CAAGTGTCCGACGGCCTCAGCCCTGGGCTGCTCCGTGTGGAAGCCTaGCATGGACGAGGCCTGACTGGGCTGCTGCTCCTGTCCCAGCAT | + |
Preference number: 2 (lower is better) Translates to: QVSDGLSPGLLRVEA*HGRGLTGLLLLSQH Trigger: ATGCTGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGGCTGAGGCCGTCGGACACTTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | CGACCATGCGCCAAGGGGCACGTGGGCCTGCGGTCCAGCAAAGGCTGCATGGAGCTGGGCTGCTCCGTGTaGAAGCCTTGCATGGACGAG | + |
Preference number: 2 (lower is better) Translates to: RPCAKGHVGLRSSKGCMELGCSV*KPCMDE Trigger: CTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAG...CTCCATGCAGCCTTTGCTGGACCGCAGGCCCACGTGCCCCTTGGCGCATGGTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | CCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTTTCGACGGCCTCAGCCCTaGGCTGCTCCGTGTGGAAGC | + |
Preference number: 2 (lower is better) Translates to: PNRPSSAHKKEESRPGCFRRPQP*AAPCGS Trigger: GCTTCCACACGGAGCAGCCCAGGGCTGAGGCCGTCG...AAAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GGGACTTGCCCAAGTGAGGAAGGCGCTGGCCCTCTCACAGACAGGCAGCCTCCCGATTCCAGCTGGAGATaGCAAAGCCTCAACACACAG | + |
Preference number: 2 (lower is better) Translates to: GTCPSEEGAGPLTDRQPPDSSWR*QSLNTQ Trigger: CTGTGTGTTGAGGCTTTGCCATCTCCAGCTGGAATC...GGGAGGCTGCCTGTCTGTGAGAGGGCCAGCGCCTTCCTCACTTGGGCAAGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GGTGTGCAGTCACGAGAGCTTCAGCAGAGCCCCGAGACCACAGTAACACTGAGGACCTTGGCACCCACATaGCAAAGGACCCTGACAGGG | + |
Preference number: 2 (lower is better) Translates to: GVQSRELQQSPETTVTLRTLAPT*QRTLTG Trigger: CCCTGTCAGGGTCCTTTGCCATGTGGGTGCCAAGGT...CCTCAGTGTTACTGTGGTCTCGGGGCTCTGCTGAAGCTCTCGTGACTGCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | ACAAGAGCAGTCCTCAAAAACCACACCTCTGAGATGGAGGTGAGGGGCAGGAGCGAAGCGACACTGGCCTaGACCTGGCACTATCGGAGG | + |
Preference number: 2 (lower is better) Translates to: TRAVLKNHTSEMEVRGRSEATLA*TWHYRR Trigger: CCTCCGATAGTGCCAGGTCCAGGCCAGTGTCGCTTC...GCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCGCGCCAAGGGGCACGTaGGCCTGCGGTCCAGCAAAG | + |
Preference number: 2 (lower is better) Translates to: TAILVPGMSVLDLPASLGAPRGT*ACGPAK Trigger: CTTTGCTGGACCGCAGGCCCACGTGCCCCTTGGCGC...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 90 bp | AGACAGGCAGCCTCCCTGAAGCTGGCCCAGTCTCCTGGGCTGACTTaGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGG | + |
Preference number: 2 (lower is better) Translates to: RQAASLKLAQSPGLT*ESRAAVVTVDMVRG Trigger: CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGACTGGGCCAGCTTCAGGGAGGCTGCCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGTGCATGGACGAGGCCTaGCTGGGCTGCTGCTCCTGT | + |
Preference number: 2 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRCMDEA*LGCCSC Trigger: ACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCA...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | GAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAGAGCCGCACACTGTCCGAGGTaGAAGCCCACAGTGCACCTA | + |
Preference number: 2 (lower is better) Translates to: ETDSTPWQVCSHESFSRAAHCPR*KPTVHL Trigger: TAGGTGCACTGTGGGCTTTCACCTCGGACAGTGTGC...GGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR GCA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGGCCCCACAAAGACTCTaGCAGGGACACCATTCCCAG | + |
Preference number: 2 (lower is better) Translates to: SALPWVPTSGWRESQGSLAPQRL*QGHHSQ Trigger: CTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGC...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR GCA 90 bp | ACAAGAGCAGTCCTCAAAAACCACACCTCTGAGATGGAGGTGAGGGGCAGGAGCGCCCCACAAAGACTCTaGCAGGGACACCATTCCCAG | + |
Preference number: 2 (lower is better) Translates to: TRAVLKNHTSEMEVRGRSAPQRL*QGHHSQ Trigger: CTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGC...GCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GGGACTTGCCCAAGTGAGGAAGGCGCTGGCCCTCTCACAGACAGGCAGCCTCCCCCAGAAAAGCTGTTGTaGAAACTGACTCAACACCTT | + |
Preference number: 2 (lower is better) Translates to: GTCPSEEGAGPLTDRQPPPEKLL*KLTQHL Trigger: AAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGG...GGGAGGCTGCCTGTCTGTGAGAGGGCCAGCGCCTTCCTCACTTGGGCAAGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | GTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGAGGCCAAGAGGGGTCTaGGCCTTAGAGCTGGGTAGG | + |
Preference number: 2 (lower is better) Translates to: VYGREASASQTVTPEKLLRPRGV*ALELGR Trigger: CCTACCCAGCTCTAAGGCTCAGACCCCTCTTGGCCT...CAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGAGGCCAAGAGGGGTCTaGGCCTTAGAGCTGGGTAGG | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLRPRGV*ALELGR Trigger: CCTACCCAGCTCTAAGGCTCAGACCCCTCTTGGCCT...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGTCTGGCCTGCCACACTaGGACCCAGCAGCTGTCACC | + |
Preference number: 2 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRSGLPH*DPAAVT Trigger: GGTGACAGCTGCTGGGTCTCAGTGTGGCAGGCCAGA...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR GCA 90 bp | GAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAGAGCCGCACACCTCCACTTCTaGCCCACAAAGACTCTGCCA | + |
Preference number: 2 (lower is better) Translates to: ETDSTPWQVCSHESFSRAAHLHF*PTKTLP Trigger: TGGCAGAGTCTTTGTGGGGCAGAAGTGGAGGTGTGC...GGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGTGGACGAGGCCTGACTaGGCTGCTGCTCCTGTCCCA | + |
Preference number: 2 (lower is better) Translates to: WADFGKQSSCSDCRYGQRWTRPD*AAAPVP Trigger: TGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCA...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGCAGGGTGGTTCCAAGTaGGGTACTGGAGGCCAGGCA | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLQGGSK*GTGGQA Trigger: TGCCTGGCCTCCAGTACCCCACTTGGAACCACCCTG...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGGCACACTGTCCGAGGTaGAAGCCCACAGTGCACCTA | + |
Preference number: 2 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRAHCPR*KPTVHL Trigger: TAGGTGCACTGTGGGCTTTCACCTCGGACAGTGTGC...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGGGCTGCATGGAGAAGTaGTGGGAACCAGTGGTTGCC | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLGCMEK*WEPVVA Trigger: GGCAACCACTGGTTCCCATCACTTCTCCATGCAGCC...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACTGGACGAGGCCTGACTaGGCTGCTGCTCCTGTCCCA | + |
Preference number: 2 (lower is better) Translates to: CQHNFKQVWVAKESSHGDWTRPD*AAAPVP Trigger: TGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCA...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGCAGGGTGGTTCCAAGTaGGGTACTGGAGGCCAGGCA | + |
Preference number: 2 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRQGGSK*GTGGQA Trigger: TGCCTGGCCTCCAGTACCCCACTTGGAACCACCCTG...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGAGGACCCTGACAGGGTaGTTCCAAGTGGGGTACTGG | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLRTLTG*FQVGYW Trigger: CCAGTACCCCACTTGGAACCACCCTGTCAGGGTCCT...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 90 bp | GGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTaGTGGAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGA | + |
Preference number: 2 (lower is better) Translates to: GREASASQTVTPEKL*WKLTQHLGRCAVTR Trigger: TCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR TCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGCCTGCCAGCTTACTGTaGCGGCAGCTTCAGATGACA | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLPASLL*RQLQMT Trigger: TGTCATCTGAAGCTGCCGTCACAGTAAGCTGGCAGG...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR TCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGAAGGCTACTGAGAACTaGGAAGCGACACTGGCCTGG | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLKATEN*EATLAW Trigger: CCAGGCCAGTGTCGCTTCTCAGTTCTCAGTAGCCTT...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR TCA 90 bp | CCCTGGACTCCAAGCCATACCCACTGTGGTCCTCTAGAGAAAAAGCTAACAATCCCTCTGAGATGGAGGTaGGGGGCAGGAGCCAAGAAA | + |
Preference number: 2 (lower is better) Translates to: PWTPSHTHCGPLEKKLTIPLRWR*GAGAKK Trigger: TTTCTTGGCTCCTGCCCCTCACCTCCATCTCAGAGG...GATTGTTAGCTTTTTCTCTAGAGGACCACAGTGGGTATGGCTTGGAGTCCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR GCA 90 bp | GTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGGCACACCTCCACTTCTaGCCCACAAAGACTCTGCCA | + |
Preference number: 2 (lower is better) Translates to: VYGREASASQTVTPEKLLAHLHF*PTKTLP Trigger: TGGCAGAGTCTTTGTGGGGCAGAAGTGGAGGTGTGC...CAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR GCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGCAAGGTTCTCTGGCCTaGCACACTGAGACCCAGCAG | + |
Preference number: 2 (lower is better) Translates to: WADFGKQSSCSDCRYGQRQGSLA*HTETQQ Trigger: CTGCTGGGTCTCAGTGTGGCAGGCCAGAGAACCTTG...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR CCA 90 bp | CACACCTCTGAGATGGAGGTGAGGGGCAGGAGCCAAGAAACGACCATGCGCCAATGGGTAGGAAAATATTaGAGTCATCTGACCTGCCAG | + |
Preference number: 2 (lower is better) Translates to: HTSEMEVRGRSQETTMRQWVGKY*SHLTCQ Trigger: CTGGCAGGTCAGATGACTCCAATATTTTCCTACCCA...TTGGCGCATGGTCGTTTCTTGGCTCCTGCCCCTCACCTCCATCTCAGAGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR TCA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCGGCTGCATGGAGAAGTaGTGGGAACCAGTGGTTGCC | + |
Preference number: 2 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFGCMEK*WEPVVA Trigger: GGCAACCACTGGTTCCCATCACTTCTCCATGCAGCC...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR TCA 90 bp | CCCTGGACTCCAAGCCATACCCACTGTGGTCCTCTAGAGAAAAAGCTAACAATCCAAAAACCACACCTCTaGGATGGAGGTGAGGGGCAG | + |
Preference number: 2 (lower is better) Translates to: PWTPSHTHCGPLEKKLTIQKPHL*DGGEGQ Trigger: CTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTG...GATTGTTAGCTTTTTCTCTAGAGGACCACAGTGGGTATGGCTTGGAGTCCAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR TCA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGTGGGATGTCTGTTCTTaGCCTACCAGCCAGCTTAGG | + |
Preference number: 2 (lower is better) Translates to: GLTLESRAAVVTVDMVRGWDVCS*PTSQLR Trigger: CCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCA...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | CCCTGGACTCCAAGCCATACCCACTGTGGTCCTCTAGAGAAAAAGCTAACAATCGGAGGAGTCCAGGCCTaGGTGCTTTCACTTGTCATG | + |
Preference number: 2 (lower is better) Translates to: PWTPSHTHCGPLEKKLTIGGVQA*VLSLVM Trigger: CATGACAAGTGAAAGCACCCAGGCCTGGACTCCTCC...GATTGTTAGCTTTTTCTCTAGAGGACCACAGTGGGTATGGCTTGGAGTCCAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR CCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGCCAAGCAGGATACCTTaGCACCCACATGGCAAAGGA | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLPSRIP*HPHGKG Trigger: TCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGG...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGACTGACTCAACACCTTaGCAGGTGTGCAGTCACGAG | + |
Preference number: 2 (lower is better) Translates to: GLTLESRAAVVTVDMVRGTDSTP*QVCSHE Trigger: CTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGT...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACGCTGGCCCAGTCTCCTaGGCTGACTTTGGAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: CQHNFKQVWVAKESSHGDAGPVS*ADFGKQ Trigger: CTGCTTTCCAAAGTCAGCCCAGGAGACTGGGCCAGC...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 90 bp | TATGGTCAGAGGGGAGAAGGTAGAAGGGAGAGATTACTATCTGCATaGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCT | + |
Preference number: 2 (lower is better) Translates to: YGQRGEGRRERLLSA*PWVPTSGWRESQGS Trigger: AGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTCTCCCTTCTACCTTCTCCCCTCTGACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCCAAAAACCACACCTCTaGGATGGAGGTGAGGGGCAG | + |
Preference number: 2 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFQKPHL*DGGEGQ Trigger: CTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTG...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGCTATCTGCATTGCCCTaGGTGCCTACAAGTGGATGG | + |
Preference number: 2 (lower is better) Translates to: WADFGKQSSCSDCRYGQRLSALP*VPTSGW Trigger: CCATCCACTTGTAGGCACCCAGGGCAATGCAGATAG...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGAGCTGTTGTGGAAACTaGCTCAACACCTTGGCAGGT | + |
Preference number: 2 (lower is better) Translates to: WADFGKQSSCSDCRYGQRSCCGN*LNTLAG Trigger: ACCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCT...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACCCAAGCAGGATACCTTaGCACCCACATGGCAAAGGA | + |
Preference number: 2 (lower is better) Translates to: CQHNFKQVWVAKESSHGDPSRIP*HPHGKG Trigger: TCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGG...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGCAAGGACTCACTTTTTaGCCAAGAGGGTTCGAAGGA | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLQGLTF*PRGFEG Trigger: TCCTTCGAACCCTCTTGGCCAAAAAGTGAGTCCTTG...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGCAAGGACTCACTTTTTaGCCAAGAGGGTTCGAAGGA | + |
Preference number: 2 (lower is better) Translates to: VYGREASASQTVTPEKLLQGLTF*PRGFEG Trigger: TCCTTCGAACCCTCTTGGCCAAAAAGTGAGTCCTTG...CAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR GCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCGTCTCCAACTTCATCTaGACACTGTCCGAGGTGAAA | + |
Preference number: 2 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFVSNFI*TLSEVK Trigger: TTTCACCTCGGACAGTGTGCAGATGAAGTTGGAGAC...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR GCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGAAATCGCCCAAGTTCTaGTCACAAAAAGGAGGAGTC | + |
Preference number: 2 (lower is better) Translates to: SVYGREASASQTVTPEKLKSPKF*SQKGGV Trigger: GACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTT...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GACCTTGGGAGAAATTCCACAGGACAACAGATTCCAGCTGGAGATGGCAAAGCCTGGGTAGGAAAATATTaGAGTCATCTGACCTGCCAG | + |
Preference number: 2 (lower is better) Translates to: DLGRNSTGQQIPAGDGKAWVGKY*SHLTCQ Trigger: CTGGCAGGTCAGATGACTCCAATATTTTCCTACCCA...GGCTTTGCCATCTCCAGCTGGAATCTGTTGTCCTGTGGAATTTCTCCCAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGTCCTCACAGCTATTTTaGTTCCTGGGATGTCTGTTC | + |
Preference number: 2 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRSSQLF*FLGCLF Trigger: GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGA...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGTCCAGTCTCAGTGTATaGAAGAGAAGCCTCAGCTTC | + |
Preference number: 2 (lower is better) Translates to: WADFGKQSSCSDCRYGQRSSLSV*KRSLSF Trigger: GAAGCTGAGGCTTCTCTTCCATACACTGAGACTGGA...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | ATTTCTGGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTGCATGGACGAGGCCTaGCTGGGCTGCTGCTCCTGT | + |
Preference number: 2 (lower is better) Translates to: ISGFKHMIISTRCFLPAVCMDEA*LGCCSC Trigger: ACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCA...AACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCCAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | CAGCTGTTTACTTTTTGGTTTCCTGACAAGGGGTCCTGCTTCCTAGCTCTGCTGTGCTTTCACTTGTCATaGGCTCTGAAAAGGCCAAGA | + |
Preference number: 2 (lower is better) Translates to: QLFTFWFPDKGSCFLALLCFHLS*ALKRPR Trigger: TCTTGGCCTTTTCAGAGCTCATGACAAGTGAAAGCA...CAGCAGAGCTAGGAAGCAGGACCCCTTGTCAGGAAACCAAAAAGTAAACAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGTGCTTTCACTTGTCATaGGCTCTGAAAAGGCCAAGA | + |
Preference number: 2 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRCFHLS*ALKRPR Trigger: TCTTGGCCTTTTCAGAGCTCATGACAAGTGAAAGCA...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGCCCTGTTCCTTCCTTTaGAGTTCTTTAATACAAACT | + |
Preference number: 2 (lower is better) Translates to: SALPWVPTSGWRESQGSLPCSFL*SSLIQT Trigger: AGTTTGTATTAAAGAACTTCAAAGGAAGGAACAGGG...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR GCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCAAATCGCCCAAGTTCTaGTCACAAAAAGGAGGAGTC | + |
Preference number: 2 (lower is better) Translates to: TAILVPGMSVLDLPASLGKSPKF*SQKGGV Trigger: GACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTT...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACACAACAGATTCCAGCTaGAGATGGCAAAGCCTCAAC | + |
Preference number: 2 (lower is better) Translates to: CQHNFKQVWVAKESSHGDTTDSS*RWQSLN Trigger: GTTGAGGCTTTGCCATCTCCAGCTGGAATCTGTTGT...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR TCA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGCCCTGTTCCTTCCTTTaGAGTTCTTTAATACAAACT | + |
Preference number: 2 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRPCSFL*SSLIQT Trigger: AGTTTGTATTAAAGAACTTCAAAGGAAGGAACAGGG...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 90 bp | AAAAACCCTCCCAAAAGAATCCTTTGGGTGACATTTGTCAATTATTaGTGCAGGCTAGAGGCACCTGTGAATGATAAGGCTACTGAGAAC | + |
Preference number: 2 (lower is better) Translates to: KNPPKRILWVTFVNY*CRLEAPVNDKATEN Trigger: GTTCTCAGTAGCCTTATCATTCACAGGTGCCTCTAGCCTGCACAAATAATTGACAAATGTCACCCAAAGGATTCTTTTGGGAGGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 90 bp | GCCAGGCACCTGAGGACCACTGCTAGAGTATCCCTGTTCCTTCCTTaGAAGTTCTTTAATACAAACTCTTATGCAAAACAAGCAAACAAA | + |
Preference number: 2 (lower is better) Translates to: ARHLRTTARVSLFLP*KFFNTNSYAKQANK Trigger: TTTGTTTGCTTGTTTTGCATAAGAGTTTGTATTAAAGAACTTCAAAGGAAGGAACAGGGATACTCTAGCAGTGGTCCTCAGGTGCCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CCA 90 bp | GGACTATTTAATGTAAAATTCATCAATAGCAAGTCCCTGGCTGCTGCCAATTCCCAGCTGTTTACTTTTTaGTTTCCTGACAAGGGGTCC | + |
Preference number: 2 (lower is better) Translates to: GLFNVKFINSKSLAAANSQLFTF*FPDKGS Trigger: GGACCCCTTGTCAGGAAACCAAAAAGTAAACAGCTG...GGAATTGGCAGCAGCCAGGGACTTGCTATTGATGAATTTTACATTAAATAGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 72 bp | CCTCAGCCCTGGGCTGCTCCGTGTGGAAGCCTTGCATaGACGAGGCCTGACTGGGCTGCTGCTCCTGTCCCA | + |
Preference number: 3 (lower is better) Translates to: PQPWAAPCGSLA*TRPDWAAAPVP Trigger: TGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGGCTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 72 bp | GCTCCGTGTGGAAGCCTTGCATGGACGAGGCCTGACTaGGCTGCTGCTCCTGTCCCAGCATGCCCAAGCACC | + |
Preference number: 3 (lower is better) Translates to: APCGSLAWTRPD*AAAPVPACPST Trigger: GGTGCTTGGGCATGCTGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 72 bp | GGCCTGGACCTGGCACTATCGGAGGAGAAGTGGGCCTaGGGGATTCCCTCCCACACAGGCACACCTCCACTT | + |
Preference number: 3 (lower is better) Translates to: GLDLALSEEKWA*GIPSHTGTPPL Trigger: AAGTGGAGGTGTGCCTGTGTGGGAGGGAATCCCTCAGGCCCACTTCTCCTCCGATAGTGCCAGGTCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR GCA 72 bp | CCAAGAAACGACCATGCGCCAAGGGGCACGTGGGCCTaGGGTCCAGCAAAGGCTGCATGGAGAAGTGATGGG | + |
Preference number: 3 (lower is better) Translates to: PRNDHAPRGTWA*GPAKAAWRSDG Trigger: CCCATCACTTCTCCATGCAGCCTTTGCTGGACCGCAGGCCCACGTGCCCCTTGGCGCATGGTCGTTTCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | AGGGGCACGTGGGCCTGCGGTCCAGCAAAGGCTGCATaGAGAAGTGATGGGAACCAGTGGTTGCCTCCTAGG | + |
Preference number: 3 (lower is better) Translates to: RGTWACGPAKAA*RSDGNQWLPPR Trigger: CCTAGGAGGCAACCACTGGTTCCCATCACTTCTCCATGCAGCCTTTGCTGGACCGCAGGCCCACGTGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | CAGGAGCCAAGAAACGACCATGCGCCAAGGGGCACGTaGGCCTGCGGTCCAGCAAAGGCTGCATGGAGAAGT | + |
Preference number: 3 (lower is better) Translates to: QEPRNDHAPRGT*ACGPAKAAWRS Trigger: ACTTCTCCATGCAGCCTTTGCTGGACCGCAGGCCCACGTGCCCCTTGGCGCATGGTCGTTTCTTGGCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR TCA 72 bp | AGCAGGATACCTTGGCACCCACATGGCAAAGGACCCTaGCAGGGTGGTTCCAAGTGGGGTACTGGAGGCCAG | + |
Preference number: 3 (lower is better) Translates to: SRIPWHPHGKGP*QGGSKWGTGGQ Trigger: CTGGCCTCCAGTACCCCACTTGGAACCACCCTGTCAGGGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 72 bp | GCGAGGGAGGGACGAGAGCCCAAATCGCCCAAGTTCTaGTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTT | + |
Preference number: 3 (lower is better) Translates to: AREGREPKSPKF*SQKGGVQAWVL Trigger: AAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCTCCCTCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 72 bp | GAGGGATTCCCTCCCACACAGGCACACCTCCACTTCTaGCCCACAAAGACTCTGCCAGGGACACCATTCCCA | + |
Preference number: 3 (lower is better) Translates to: EGFPPTQAHLHF*PTKTLPGTPFP Trigger: TGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGCAGAAGTGGAGGTGTGCCTGTGTGGGAGGGAATCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | AATTCACAATTGCCAAGTGTCCGACGGCCTCAGCCCTaGGCTGCTCCGTGTGGAAGCCTTGCATGGACGAGG | + |
Preference number: 3 (lower is better) Translates to: NSQLPSVRRPQP*AAPCGSLAWTR Trigger: CCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGGCTGAGGCCGTCGGACACTTGGCAATTGTGAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | CAGACAGGCAGCCTCCCTGAAGCTGGCCCAGTCTCCTaGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGAC | + |
Preference number: 3 (lower is better) Translates to: QTGSLPEAGPVS*ADFGKQSSCSD Trigger: GTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGACTGGGCCAGCTTCAGGGAGGCTGCCTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | TGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTaGCCTGCCACACTGAGACCCAGCAGCTGTCACCCT | + |
Preference number: 3 (lower is better) Translates to: CLQVDGGKAKVL*PATLRPSSCHP Trigger: AGGGTGACAGCTGCTGGGTCTCAGTGTGGCAGGCCAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR GCA 72 bp | GCTGTTGTGGAAACTGACTCAACACCTTGGCAGGTGTaGAGTCACGAGAGCTTCAGCAGAGCCCCGAGACCA | + |
Preference number: 3 (lower is better) Translates to: AVVETDSTPWQV*SHESFSRAPRP Trigger: TGGTCTCGGGGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR TCA 72 bp | GACCACAGTAACACTGAGGAGGGTGGGGAGGGACGGTaGAGACAACTCCTCACAGCTATTTTGGTTCCTGGG | + |
Preference number: 3 (lower is better) Translates to: DHSNTEEGGEGR*RQLLTAILVPG Trigger: CCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCTCCCCACCCTCCTCAGTGTTACTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR TCA 72 bp | CCCAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTaGCTCAACACCTTGGCAGGTGTGCAGTCACGAGAG | + |
Preference number: 3 (lower is better) Translates to: PRRSLQKSCCGN*LNTLAGVQSRE Trigger: CTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR GCA 72 bp | CCCATCCATGTAAGACTAACCCACAAAATTCACAATTaGCAAGTGTCCGACGGCCTCAGCCCTGGGCTGCTC | + |
Preference number: 3 (lower is better) Translates to: PIHVRLTHKIHN*QVSDGLSPGLL Trigger: GAGCAGCCCAGGGCTGAGGCCGTCGGACACTTGGCAATTGTGAATTTTGTGGGTTAGTCTTACATGGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 72 bp | ACACAAGGTCCTTCTGTCTTCAAGGAGGCAGGAAGATaGCTCACCCTTACATCTCTGTGGCCTAAGGAGCCC | + |
Preference number: 3 (lower is better) Translates to: TQGPSVFKEAGR*LTLTSLWPKEP Trigger: GGGCTCCTTAGGCCACAGAGATGTAAGGGTGAGGCATCTTCCTGCCTCCTTGAAGACAGAAGGACCTTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | GAGATTACTATCTGCATTGCCCTGGGTGCCTACAAGTaGATGGAGGGAAAGCCAAGGTTCTCTGGCCTGCCA | + |
Preference number: 3 (lower is better) Translates to: EITICIALGAYK*MEGKPRFSGLP Trigger: TGGCAGGCCAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | GGGAGGGACGGTGAAGACAACTCCTCACAGCTATTTTaGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCA | + |
Preference number: 3 (lower is better) Translates to: GRDGEDNSSQLF*FLGCLFLTYQP Trigger: TGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | GTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGCCACAAAATTCACAATaGCCAAGTGTCCGACGGCCT | + |
Preference number: 3 (lower is better) Translates to: VYGREASASQTVTPEKLLPQNSQ*PSVRRP Trigger: AGGCCGTCGGACACTTGGCAATTGTGAATTTTGTGG...CAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR TCA 72 bp | AGCAGCTGTCACCCTGCACAAGCTTTAAGAGGTAGCTaGAGTGAGGCAAGCCAATGTAGTGGACCACACAAG | + |
Preference number: 3 (lower is better) Translates to: SSCHPAQALRGS*SEASQCSGPHK Trigger: CTTGTGTGGTCCACTACATTGGCTTGCCTCACTTCAGCTACCTCTTAAAGCTTGTGCAGGGTGACAGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR GCA 72 bp | GTAGAAGGGAGAGATTACTATCTGCATTGCCCTGGGTaGCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTC | + |
Preference number: 3 (lower is better) Translates to: VEGRDYYLHCPG*LQVDGGKAKVL Trigger: GAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTCTCCCTTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CCA 72 bp | GAAGGTAGAAGGGAGAGATTACTATCTGCATTGCCCTaGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGT | + |
Preference number: 3 (lower is better) Translates to: EGRRERLLSALP*VPTSGWRESQG Trigger: ACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTCTCCCTTCTACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR-3UTR CAA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGCTCCTCACAGCTATTTaGGTTCCTGGGATGTCTGTT | + |
Preference number: 3 (lower is better) Translates to: GLTLESRAAVVTVDMVRGLLTAI*VPGMSV Trigger: AACAGACATCCCAGGAACCAAAATAGCTGTGAGGAG...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 72 bp | GTTCTTGACCTACCAGCCAGCTTAGGCAGGAAGAAGTaGAATCCCAAGGACTCACTTTTTGGCCAAGAGGGT | + |
Preference number: 3 (lower is better) Translates to: VLDLPASLGRKK*NPKDSLFGQEG Trigger: ACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAGCTGGCTGGTAGGTCAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR GCA 72 bp | TATGACTCTTCCGTTTTCAGAGTCTCCAACTTCATCTaGACACTGTCCGAGGTGAAAGCCCACAGTGCACCT | + |
Preference number: 3 (lower is better) Translates to: YDSSVFRVSNFI*TLSEVKAHSAP Trigger: AGGTGCACTGTGGGCTTTCACCTCGGACAGTGTGCAGATGAAGTTGGAGACTCTGAAAACGGAAGAGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGACTCCAGAAAAGCTGTaGTGGAAACTGACTCAACAC | + |
Preference number: 3 (lower is better) Translates to: GLTLESRAAVVTVDMVRGTPEKL*WKLTQH Trigger: GTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGT...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR TCA 72 bp | CCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTaGCCTACCAGCCAGCTTAGGCAGGAAGAAGTGAAA | + |
Preference number: 3 (lower is better) Translates to: PHSYFGSWDVCS*PTSQLRQEEVK Trigger: TTTCACTTCTTCCTGCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CCA 72 bp | AGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTaGCCAAGAGGGTTCGAAGGAAATGGCACAAGAGCA | + |
Preference number: 3 (lower is better) Translates to: RQEEVKSQGLTF*PRGFEGNGTRA Trigger: TGCTCTTGTGCCATTTCCTTCGAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGTCCCTGTTCCTTCCTTaGAAGTTCTTTAATACAAAC | + |
Preference number: 3 (lower is better) Translates to: SALPWVPTSGWRESQGSLSLFLP*KFFNTN Trigger: GTTTGTATTAAAGAACTTCAAAGGAAGGAACAGGGA...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | GTCTCCTGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTACATTTGTCAATTATTaGTGCAGGCTAGAGGCACCT | + |
Preference number: 3 (lower is better) Translates to: VSWADFGKQSSCSDCRYGTFVNY*CRLEAP Trigger: AGGTGCCTCTAGCCTGCACAAATAATTGACAAATGT...ACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCACATTTGTCAATTATTaGTGCAGGCTAGAGGCACCT | + |
Preference number: 3 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFTFVNY*CRLEAP Trigger: AGGTGCCTCTAGCCTGCACAAATAATTGACAAATGT...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGTCCCTGTTCCTTCCTTaGAAGTTCTTTAATACAAAC | + |
Preference number: 3 (lower is better) Translates to: GLTLESRAAVVTVDMVRGSLFLP*KFFNTN Trigger: GTTTGTATTAAAGAACTTCAAAGGAAGGAACAGGGA...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | CAGCTGTTTACTTTTTGGTTTCCTGACAAGGGGTCCTGCTTCCTAGCTCTGCTGTCCCAAAAGAATCCTTaGGGTGACATTTGTCAATTA | + |
Preference number: 3 (lower is better) Translates to: QLFTFWFPDKGSCFLALLSQKNP*GDICQL Trigger: TAATTGACAAATGTCACCCAAAGGATTCTTTTGGGA...CAGCAGAGCTAGGAAGCAGGACCCCTTGTCAGGAAACCAAAAAGTAAACAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | GGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTACTTTCCACAAAATTCACAATaGCCAAGTGTCCGACGGCCT | + |
Preference number: 3 (lower is better) Translates to: GFKHMIISTRCFLPAVYFPQNSQ*PSVRRP Trigger: AGGCCGTCGGACACTTGGCAATTGTGAATTTTGTGG...AAAGTAAACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR TCA 72 bp | CAGGAATATATCACACACCCAGCTCAATGTTTAATTTaGGTGTGTGGGGGCTTAGAGGCTAGTTATGAAAGA | + |
Preference number: 3 (lower is better) Translates to: QEYITHPAQCLI*VCGGLEASYER Trigger: TCTTTCATAACTAGCCTCTAAGCCCCCACACACTCAAATTAAACATTGAGCTGGGTGTGTGATATATTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR-3UTR CAA 90 bp | GGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTACTTTACTCCAGAAAAGCTGTaGTGGAAACTGACTCAACAC | + |
Preference number: 3 (lower is better) Translates to: GFKHMIISTRCFLPAVYFTPEKL*WKLTQH Trigger: GTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGT...AAAGTAAACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 72 bp | GACGGCCTCAGCCCTGGGCTGCTCCGTGTGGAAGCCTaGCATGGACGAGGCCTGACTGGGCTGCTGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: DGLSPGLLRVEA*HGRGLTGLLLL Trigger: CAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGGCTGAGGCCGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CCCTGGGCTGCTCCGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGGGCTGCTAGGCCCTGTCTGGCCTaGTGTTCCTGTGCTCGGGGC | + |
Preference number: 4 (lower is better) Translates to: PWAAPCGSLAWTRPDWAARPCLA*CSCARG Trigger: GCCCCGAGCACAGGAACAGCAGGCCAGACAGGGCCT...AGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CGACCATGCGCCAAGGGGCACGTGGGCCTGCGGTCCAGCAAAGGCTGCATGGAGCAGGAGCTGTCTGTCTaGGTCGTCCATGGGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: RPCAKGHVGLRSSKGCMEQELSV*VVHGLP Trigger: AGGGAGCCCATGGACGACCCAGACAGACAGCTCCTG...CTCCATGCAGCCTTTGCTGGACCGCAGGCCCACGTGCCCCTTGGCGCATGGTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GGGACTTGCCCAAGTGAGGAAGGCGCTGGCCCTCTCACAGACAGGCAGCCTCCCTCTCCAGGCCCTGTCTaGCCTGCTGTTCCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: GTCPSEEGAGPLTDRQPPSPGPV*PAVPVL Trigger: GAGCACAGGAACAGCAGGCCAGACAGGGCCTGGAGA...GGGAGGCTGCCTGTCTGTGAGAGGGCCAGCGCCTTCCTCACTTGGGCAAGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GGGACTTGCCCAAGTGAGGAAGGCGCTGGCCCTCTCACAGACAGGCAGCCTCCCCCAGCAGAGCCTTGTTaGTGCTTTCCCACCGGGATC | + |
Preference number: 4 (lower is better) Translates to: GTCPSEEGAGPLTDRQPPPAEPC*CFPTGI Trigger: GATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGG...GGGAGGCTGCCTGTCTGTGAGAGGGCCAGCGCCTTCCTCACTTGGGCAAGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GGGACTTGCCCAAGTGAGGAAGGCGCTGGCCCTCTCACAGACAGGCAGCCTCCCAGCTTCTCCAGCCGCTaGATTTTCACCTGCAGGCCC | + |
Preference number: 4 (lower is better) Translates to: GTCPSEEGAGPLTDRQPPSFSSR*IFTCRP Trigger: GGGCCTGCAGGTGAAAATCCAGCGGCTGGAGAAGCT...GGGAGGCTGCCTGTCTGTGAGAGGGCCAGCGCCTTCCTCACTTGGGCAAGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CCCTGGGCTGCTCCGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGGGCTGCTAGCTTCTCCAGCCGCTaGATTTTCACCTGCAGGCCC | + |
Preference number: 4 (lower is better) Translates to: PWAAPCGSLAWTRPDWAASFSSR*IFTCRP Trigger: GGGCCTGCAGGTGAAAATCCAGCGGCTGGAGAAGCT...AGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GGGACTTGCCCAAGTGAGGAAGGCGCTGGCCCTCTCACAGACAGGCAGCCTCCCAGGTGGGTCTCCTGCTaGTTCATCAGCTCGCACATC | + |
Preference number: 4 (lower is better) Translates to: GTCPSEEGAGPLTDRQPPRWVSC*FISSHI Trigger: GATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCT...GGGAGGCTGCCTGTCTGTGAGAGGGCCAGCGCCTTCCTCACTTGGGCAAGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CGACCATGCGCCAAGGGGCACGTGGGCCTGCGGTCCAGCAAAGGCTGCATGGAGGCTCAGCATACTTCTTaGACAGTGCAGCCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: RPCAKGHVGLRSSKGCMEAQHTS*TVQPAS Trigger: AGAAGCTGGCTGCACTGTGCAAGAAGTATGCTGAGC...CTCCATGCAGCCTTTGCTGGACCGCAGGCCCACGTGCCCCTTGGCGCATGGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGGGCTGCTGCTCCTGTCCCAGTCCTGTGGCCTCCGATaGTCTCGGTCTCCAACTTCA | + |
Preference number: 4 (lower is better) Translates to: RVEALHGRGLTGLLLLSQSCGLR*SRSPTS Trigger: TGAAGTTGGAGACCGAGACCATCGGAGGCCACAGGA...CTGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | AGGGACGAGAGCCCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGAGGCCCTGTCTGGCCTaGTGTTCCTGTGCTCGGGGC | + |
Preference number: 4 (lower is better) Translates to: RDESPNRPSSAHKKEESRRPCLA*CSCARG Trigger: GCCCCGAGCACAGGAACAGCAGGCCAGACAGGGCCT...CCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CACACCTCTGAGATGGAGGTGAGGGGCAGGAGCCAAGAAACGACCATGCGCCAATCCTTCAGCATCTCCTaGGCCTGCTGGAGCTTGGCG | + |
Preference number: 4 (lower is better) Translates to: HTSEMEVRGRSQETTMRQSFSIS*ACWSLA Trigger: CGCCAAGCTCCAGCAGGCCCAGGAGATGCTGAAGGA...TTGGCGCATGGTCGTTTCTTGGCTCCTGCCCCTCACCTCCATCTCAGAGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAGAGCCCCTTGGAGGCAGTGGTaGCCTCTGGCCTCCGCTCAG | + |
Preference number: 4 (lower is better) Translates to: ETDSTPWQVCSHESFSRAPWRQW*PLASAQ Trigger: CTGAGCGGAGGCCAGAGGCCACCACTGCCTCCAAGG...GGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | ACAAGAGCAGTCCTCAAAAACCACACCTCTGAGATGGAGGTGAGGGGCAGGAGCCAGGAGCCTGGCTTGTaGAACCTTCGGCTTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: TRAVLKNHTSEMEVRGRSQEPGL*NLRLPP Trigger: GGGCGGAAGCCGAAGGTTCCACAAGCCAGGCTCCTG...GCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAGAGCCCAGGAGCCTGGCTTGTaGAACCTTCGGCTTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: ETDSTPWQVCSHESFSRAQEPGL*NLRLPP Trigger: GGGCGGAAGCCGAAGGTTCCACAAGCCAGGCTCCTG...GGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTTTCCTTGGAGGCAGTGGTaGCCTCTGGCCTCCGCTCAG | + |
Preference number: 4 (lower is better) Translates to: PNRPSSAHKKEESRPGCFPWRQW*PLASAQ Trigger: CTGAGCGGAGGCCAGAGGCCACCACTGCCTCCAAGG...AAAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGCAGAGGGCCCCAGGCTaGGCTGCTTTAGCTCGAGCC | + |
Preference number: 4 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRQRAPG*AALARA Trigger: GGCTCGAGCTAAAGCAGCTCAGCCTGGGGCCCTCTG...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | GGTGTGCAGTCACGAGAGCTTCAGCAGAGCCCCGAGACCACAGTAACACTGAGGCCTGTACCCTCTTGTTaGGGTCATTGCGCTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: GVQSRELQQSPETTVTLRPVPSC*GHCARS Trigger: AGACCGAGCGCAATGACCTCAACAAGAGGGTACAGG...CCTCAGTGTTACTGTGGTCTCGGGGCTCTGCTGAAGCTCTCGTGACTGCACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GTCTCCTGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTAGTGGGCTCACCCTGTaGTCCCTCCTCAGCCGGGCC | + |
Preference number: 4 (lower is better) Translates to: VSWADFGKQSSCSDCRYGSGLTL*SLLSRA Trigger: GGCCCGGCTGAGGAGGGAGCACAGGGTGAGCCCACT...ACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCAGTGGGCTCACCCTGTaGTCCCTCCTCAGCCGGGCC | + |
Preference number: 4 (lower is better) Translates to: TAILVPGMSVLDLPASLGSGLTL*SLLSRA Trigger: GGCCCGGCTGAGGAGGGAGCACAGGGTGAGCCCACT...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR CCA 90 bp | ACAAGAGCAGTCCTCAAAAACCACACCTCTGAGATGGAGGTGAGGGGCAGGAGCAGCAAGGAGCGTCTGTaGCCCTTGGAGAGCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: TRAVLKNHTSEMEVRGRSSKERL*PLESWL Trigger: CAGCCAGCTCTCCAAGGGCCACAGACGCTCCTTGCT...GCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR CCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGAGGCAGTGGCAGGGGTaGGCTCTCCAGGCCCTGTCT | + |
Preference number: 4 (lower is better) Translates to: SVYGREASASQTVTPEKLRQWQG*ALQALS Trigger: AGACAGGGCCTGGAGAGCCCACCCCTGCCACTGCCT...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR TCA 90 bp | CAGCTGTTTACTTTTTGGTTTCCTGACAAGGGGTCCTGCTTCCTAGCTCTGCTGCAGAGGGCCCCAGGCTaGGCTGCTTTAGCTCGAGCC | + |
Preference number: 4 (lower is better) Translates to: QLFTFWFPDKGSCFLALLQRAPG*AALARA Trigger: GGCTCGAGCTAAAGCAGCTCAGCCTGGGGCCCTCTG...CAGCAGAGCTAGGAAGCAGGACCCCTTGTCAGGAAACCAAAAAGTAAACAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGCCCCAGGCTGAGCTaGTTTAGCTCGAGCCCCCTC | + |
Preference number: 4 (lower is better) Translates to: WADFGKQSSCSDCRYGQRGPRLS*FSSSPL Trigger: GAGGGGGCTCGAGCTAAAGCAGCTCAGCCTGGGGCC...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR GCA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGTCATTGCGCTCGGTCTaGAGTGCTCGGCACAGCTTC | + |
Preference number: 4 (lower is better) Translates to: SALPWVPTSGWRESQGSLSLRSV*SARHSF Trigger: GAAGCTGTGCCGAGCACTGCAGACCGAGCGCAATGA...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR CCA 90 bp | GAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAGAGCCCAGGCTCCCCATTCCTaGCTGCATAGGTTCGGGACT | + |
Preference number: 4 (lower is better) Translates to: ETDSTPWQVCSHESFSRAQAPHS*LHRFGT Trigger: AGTCCCGAACCTATGCAGCCAGGAATGGGGAGCCTG...GGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR CCA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGAGCTCGCACATCCTCTaGGACTCCACCGCTTCCTTC | + |
Preference number: 4 (lower is better) Translates to: SALPWVPTSGWRESQGSLSSHIL*DSTASF Trigger: GAAGGAAGCGGTGGAGTCCCAGAGGATGTGCGAGCT...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCAGGCAGTGGCAGGGGTaGGCTCTCCAGGCCCTGTCT | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFRQWQG*ALQALS Trigger: AGACAGGGCCTGGAGAGCCCACCCCTGCCACTGCCT...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR TCA 90 bp | AGGGACGAGAGCCCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGGCTCGATCAACTTCTTaGGCCTCTCGGCTAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: RDESPNRPSSAHKKEESRARSTS*ASRLAP Trigger: TGGAGCTAGCCGAGAGGCTCAAGAAGTTGATCGAGC...CCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR GCA 90 bp | CACACCTCTGAGATGGAGGTGAGGGGCAGGAGCCAAGAAACGACCATGCGCCAAGCTCAGCATACTTCTTaGACAGTGCAGCCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: HTSEMEVRGRSQETTMRQAQHTS*TVQPAS Trigger: AGAAGCTGGCTGCACTGTGCAAGAAGTATGCTGAGC...TTGGCGCATGGTCGTTTCTTGGCTCCTGCCCCTCACCTCCATCTCAGAGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CACACCTCTGAGATGGAGGTGAGGGGCAGGAGCCAAGAAACGACCATGCGCCAATGGCTCTGCTTCTTCTaGAGGAGCTTCATCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: HTSEMEVRGRSQETTMRQWLCFF*RSFICF Trigger: GAAGCAGATGAAGCTCCTGCAGAAGAAGCAGAGCCA...TTGGCGCATGGTCGTTTCTTGGCTCCTGCCCCTCACCTCCATCTCAGAGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR GCA 90 bp | AGGGACGAGAGCCCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGTGCACGAGCTGGCTCTaGTTCTTCTGCAGGAGCTTC | + |
Preference number: 4 (lower is better) Translates to: RDESPNRPSSAHKKEESRCTSWL*FFCRSF Trigger: GAAGCTCCTGCAGAAGAAGCAGAGCCAGCTCGTGCA...CCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTCCTTCTCTCGCTGGTaGCGCTCCTCTGCCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: SVYGREASASQTVTPEKLSFSRW*RSSASF Trigger: GAAGGAGGCAGAGGAGCGGCACCAGCGAGAGAAGGA...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | ACAAGAGCAGTCCTCAAAAACCACACCTCTGAGATGGAGGTGAGGGGCAGGAGCGCAGAGCCTTGTTGCTaGTTTCCCACCGGGATCGAT | + |
Preference number: 4 (lower is better) Translates to: TRAVLKNHTSEMEVRGRSAEPCC*FPTGID Trigger: ATCGATCCCGGTGGGAAAGCAGCAACAAGGCTCTGC...GCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCGCGCTCGGTCTGCAGTaGTCGGCACAGCTTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: TAILVPGMSVLDLPASLGALGLQ*SAQLLQ Trigger: CTGGAGAAGCTGTGCCGAGCACTGCAGACCGAGCGC...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGAGCCAGCTTCTCCTCTaGGGTACTCAGCGTGTTCAG | + |
Preference number: 4 (lower is better) Translates to: SALPWVPTSGWRESQGSLSQLLL*GTQRVQ Trigger: CTGAACACGCTGAGTACCCCAGAGGAGAAGCTGGCT...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | ACAAGAGCAGTCCTCAAAAACCACACCTCTGAGATGGAGGTGAGGGGCAGGAGCAGCCAGCTTCTCCTCTaGGGTACTCAGCGTGTTCAG | + |
Preference number: 4 (lower is better) Translates to: TRAVLKNHTSEMEVRGRSSQLLL*GTQRVQ Trigger: CTGAACACGCTGAGTACCCCAGAGGAGAAGCTGGCT...GCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GAAATATCTCATCTTCCCAAGCAGGATACCTTGGCACCCACATGGCAAAGGACCGGGCCTGCTGGAGCTTaGCGTCCACTAGCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: EISHLPKQDTLAPTWQRTGPAGA*RPLAAA Trigger: AGCAGCAGCTAGTGGACGCCAAGCTCCAGCAGGCCC...GGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGGGAAGATGAGATATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTTTAGCTCGCACATCCTCTaGGACTCCACCGCTTCCTTC | + |
Preference number: 4 (lower is better) Translates to: PNRPSSAHKKEESRPGCFSSHIL*DSTASF Trigger: GAAGGAAGCGGTGGAGTCCCAGAGGATGTGCGAGCT...AAAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGAGCGTCTGTGGCCCTTaGAGAGCTGGCTGGTTGAGC | + |
Preference number: 4 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRSVCGP*RAGWLS Trigger: GCTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCT...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGAGCGTCTGTGGCCCTTaGAGAGCTGGCTGGTTGAGC | + |
Preference number: 4 (lower is better) Translates to: GLTLESRAAVVTVDMVRGSVCGP*RAGWLS Trigger: GCTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCT...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GACCTTGGGAGAAATTCCACAGGACAACAGATTCCAGCTGGAGATGGCAAAGCCTCTCCAGGCCCTGTCTaGCCTGCTGTTCCTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: DLGRNSTGQQIPAGDGKASPGPV*PAVPVL Trigger: GAGCACAGGAACAGCAGGCCAGACAGGGCCTGGAGA...GGCTTTGCCATCTCCAGCTGGAATCTGTTGTCCTGTGGAATTTCTCCCAAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 72 bp | GCAAAGGCTGCATGGAGAAGTGATGGGAACCAGTGGTaGCCTCCTAGGCTGAAGCCCATAGGCAAGCTTGTG | + |
Preference number: 4 (lower is better) Translates to: AKAAWRSDGNQW*PPRLKPIGKLV Trigger: CACAAGCTTGCCTATGGGCTTCAGCCTAGGAGGCAACCACTGGTTCCCATCACTTCTCCATGCAGCCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | AGGGACGAGAGCCCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGTCTGCATCAGCAGAGTaGTCTCCTTCCCTAGACCCT | + |
Preference number: 4 (lower is better) Translates to: RDESPNRPSSAHKKEESRSASAE*SPSLDP Trigger: AGGGTCTAGGGAAGGAGATCACTCTGCTGATGCAGA...CCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCGGAGAGCTGGCTGGTTaGGCCCCAGGACTTTCAACC | + |
Preference number: 4 (lower is better) Translates to: TAILVPGMSVLDLPASLGGELAG*APGLST Trigger: GGTTGAAAGTCCTGGGGCTCAACCAGCCAGCTCTCC...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTTTCTCCCCATTCCTGGCTaGATAGGTTCGGGACTTCTC | + |
Preference number: 4 (lower is better) Translates to: PNRPSSAHKKEESRPGCFLPIPG*IGSGLL Trigger: GAGAAGTCCCGAACCTATGCAGCCAGGAATGGGGAG...AAAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CTGCCCCACAAAGACTCTGCCAGGGACACCATTCCCAGGTTAAGAGAAGCAATGACAGACTCTCAAGCTTaGTTCGGGCCAGGACAGCCT | + |
Preference number: 4 (lower is better) Translates to: LPHKDSARDTIPRLREAMTDSQA*FGPGQP Trigger: AGGCTGTCCTGGCCCGAAGCAAGCTTGAGAGTCTGT...CATTGCTTCTCTTAACCTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GTCTCCTGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTTCCTTCTCTCGCTGGTaGCGCTCCTCTGCCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: VSWADFGKQSSCSDCRYGSFSRW*RSSASF Trigger: GAAGGAGGCAGAGGAGCGGCACCAGCGAGAGAAGGA...ACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CTGCCCCACAAAGACTCTGCCAGGGACACCATTCCCAGGTTAAGAGAAGCAATGGCAGAGCCTTGTTGCTaGTTTCCCACCGGGATCGAT | + |
Preference number: 4 (lower is better) Translates to: LPHKDSARDTIPRLREAMAEPCC*FPTGID Trigger: ATCGATCCCGGTGGGAAAGCAGCAACAAGGCTCTGC...CATTGCTTCTCTTAACCTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACGCGCTCGGTCTGCAGTaGTCGGCACAGCTTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: CQHNFKQVWVAKESSHGDALGLQ*SAQLLQ Trigger: CTGGAGAAGCTGTGCCGAGCACTGCAGACCGAGCGC...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCCAGGAGCTGTCTGTCTaGGTCGTCCATGGGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFQELSV*VVHGLP Trigger: AGGGAGCCCATGGACGACCCAGACAGACAGCTCCTG...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GAAATATCTCATCTTCCCAAGCAGGATACCTTGGCACCCACATGGCAAAGGACCTGTCTTCCGGCTCAGTaGGCTCACCCTGTGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: EISHLPKQDTLAPTWQRTCLPAQ*AHPVLP Trigger: AGGGAGCACAGGGTGAGCCCACTGAGCCGGAAGACA...GGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGGGAAGATGAGATATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CTGCCCCACAAAGACTCTGCCAGGGACACCATTCCCAGGTTAAGAGAAGCAATGGACGACTGGAATGCCTaGTTCAGGCTCCCCATTCCT | + |
Preference number: 4 (lower is better) Translates to: LPHKDSARDTIPRLREAMDDWNA*FRLPIP Trigger: AGGAATGGGGAGCCTGAACCAGGCATTCCAGTCGTC...CATTGCTTCTCTTAACCTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AGGGACGAGAGCCCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGAGCTCCATATTCTCCTaGCGCAGCTTGGAGTTTCGC | + |
Preference number: 4 (lower is better) Translates to: RDESPNRPSSAHKKEESRSSIFS*RSLEFR Trigger: GCGAAACTCCAAGCTGCGCCAGGAGAATATGGAGCT...CCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACGGGCCTGCTGGAGCTTaGCGTCCACTAGCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: CQHNFKQVWVAKESSHGDGPAGA*RPLAAA Trigger: AGCAGCAGCTAGTGGACGCCAAGCTCCAGCAGGCCC...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GTCTCCTGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTATCTCCTGGGCCTGCTaGAGCTTGGCGTCCACTAGC | + |
Preference number: 4 (lower is better) Translates to: VSWADFGKQSSCSDCRYGISWAC*SLASTS Trigger: GCTAGTGGACGCCAAGCTCCAGCAGGCCCAGGAGAT...ACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGATCTCCTGGGCCTGCTaGAGCTTGGCGTCCACTAGC | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRISWAC*SLASTS Trigger: GCTAGTGGACGCCAAGCTCCAGCAGGCCCAGGAGAT...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGTCCTTCAGCATCTCCTaGGCCTGCTGGAGCTTGGCG | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRSFSIS*ACWSLA Trigger: CGCCAAGCTCCAGCAGGCCCAGGAGATGCTGAAGGA...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAGAGCCAGCTGCTGCTTTAGGTaGGTCTCCTGCTGCTTCATC | + |
Preference number: 4 (lower is better) Translates to: ETDSTPWQVCSHESFSRASCCFR*VSCCFI Trigger: GATGAAGCAGCAGGAGACCCACCTAAAGCAGCAGCT...GGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CCCTGGACTCCAAGCCATACCCACTGTGGTCCTCTAGAGAAAAAGCTAACAATCAGCAAGGAGCGTCTGTaGCCCTTGGAGAGCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: PWTPSHTHCGPLEKKLTISKERL*PLESWL Trigger: CAGCCAGCTCTCCAAGGGCCACAGACGCTCCTTGCT...GATTGTTAGCTTTTTCTCTAGAGGACCACAGTGGGTATGGCTTGGAGTCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 72 bp | GCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTaGTGGAAACTGACTCAACACCTTGGCAGGTGTGCA | + |
Preference number: 4 (lower is better) Translates to: ASASQTVTPEKL*WKLTQHLGRCA Trigger: TGCACACCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | ACAAGAGCAGTCCTCAAAAACCACACCTCTGAGATGGAGGTGAGGGGCAGGAGCTGGCTCTGCTTCTTCTaGAGGAGCTTCATCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: TRAVLKNHTSEMEVRGRSWLCFF*RSFICF Trigger: GAAGCAGATGAAGCTCCTGCAGAAGAAGCAGAGCCA...GCTCCTGCCCCTCACCTCCATCTCAGAGGTGTGGTTTTTGAGGACTGCTCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGAGATGGTCCTTCTCCTaGACGAGCTGGCTCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: VYGREASASQTVTPEKLLRWSFS*TSWLCF Trigger: GAAGCAGAGCCAGCTCGTGCAGGAGAAGGACCATCT...CAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR CCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGCAGGCTCCCCATTCCTaGCTGCATAGGTTCGGGACT | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRQAPHS*LHRFGT Trigger: AGTCCCGAACCTATGCAGCCAGGAATGGGGAGCCTG...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGGACGACTGGAATGCCTaGTTCAGGCTCCCCATTCCT | + |
Preference number: 4 (lower is better) Translates to: SVYGREASASQTVTPEKLDDWNA*FRLPIP Trigger: AGGAATGGGGAGCCTGAACCAGGCATTCCAGTCGTC...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CTGCCCCACAAAGACTCTGCCAGGGACACCATTCCCAGGTTAAGAGAAGCAATGTTTCTTCTTCTCCTGTaGCCTCCGATGGTCTCGGTC | + |
Preference number: 4 (lower is better) Translates to: LPHKDSARDTIPRLREAMFLLLL*PPMVSV Trigger: GACCGAGACCATCGGAGGCCACAGGAGAAGAAGAAA...CATTGCTTCTCTTAACCTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
3UTR CAA 72 bp | AGGGGAGAAGGTAGAAGGGAGAGATTACTATCTGCATaGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGC | + |
Preference number: 4 (lower is better) Translates to: RGEGRRERLLSA*PWVPTSGWRES Trigger: GCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGATAGTAATCTCTCCCTTCTACCTTCTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCGCTCGATCAACTTCTTaGGCCTCTCGGCTAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFARSTS*ASRLAP Trigger: TGGAGCTAGCCGAGAGGCTCAAGAAGTTGATCGAGC...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | GTCTCCTGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCCTGTACCCTCTTGTTaGGGTCATTGCGCTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: VSWADFGKQSSCSDCRYGPVPSC*GHCARS Trigger: AGACCGAGCGCAATGACCTCAACAAGAGGGTACAGG...ACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CTGCCCCACAAAGACTCTGCCAGGGACACCATTCCCAGGTTAAGAGAAGCAATGATACTTCTTGCACAGTaGAGCCAGCTTCTCCTCTGG | + |
Preference number: 4 (lower is better) Translates to: LPHKDSARDTIPRLREAMILLAQ*SQLLLW Trigger: CCAGAGGAGAAGCTGGCTGCACTGTGCAAGAAGTAT...CATTGCTTCTCTTAACCTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CAGCTGTTTACTTTTTGGTTTCCTGACAAGGGGTCCTGCTTCCTAGCTCTGCTGTGCACGAGCTGGCTCTaGTTCTTCTGCAGGAGCTTC | + |
Preference number: 4 (lower is better) Translates to: QLFTFWFPDKGSCFLALLCTSWL*FFCRSF Trigger: GAAGCTCCTGCAGAAGAAGCAGAGCCAGCTCGTGCA...CAGCAGAGCTAGGAAGCAGGACCCCTTGTCAGGAAACCAAAAAGTAAACAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGAGATGGTCCTTCTCCTaGACGAGCTGGCTCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRRWSFS*TSWLCF Trigger: GAAGCAGAGCCAGCTCGTGCAGGAGAAGGACCATCT...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCACAGACTCTCAAGCTTaGTTCGGGCCAGGACAGCCT | + |
Preference number: 4 (lower is better) Translates to: TAILVPGMSVLDLPASLGTDSQA*FGPGQP Trigger: AGGCTGTCCTGGCCCGAAGCAAGCTTGAGAGTCTGT...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCAGGTGGGTCTCCTGCTaGTTCATCAGCTCGCACATC | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFRWVSC*FISSHI Trigger: GATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCT...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCGAAGGACCAGCAGAGCCTTGTTaGTGCTTTCCCACCGGGATC | + |
Preference number: 4 (lower is better) Translates to: QEEVKSQGLTFWPRGFEGPAEPC*CFPTGI Trigger: GATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGG...TCCTTCGAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCCGCTGGATTTTCACCTaGAGGCCCTCCAGCTCTTTG | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFRWIFT*RPSSSL Trigger: CAAAGAGCTGGAGGGCCTGCAGGTGAAAATCCAGCG...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCTCCTGTGGCCTCCGATaGTCTCGGTCTCCAACTTCA | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFSCGLR*SRSPTS Trigger: TGAAGTTGGAGACCGAGACCATCGGAGGCCACAGGA...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTCTCCTGCACGAGCTaGCTCTGCTTCTTCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFFSCTS*LCFFCR Trigger: CCTGCAGAAGAAGCAGAGCCAGCTCGTGCAGGAGAA...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGTCTGCATCAGCAGAGTaGTCTCCTTCCCTAGACCCT | + |
Preference number: 4 (lower is better) Translates to: WADFGKQSSCSDCRYGQRSASAE*SPSLDP Trigger: AGGGTCTAGGGAAGGAGATCACTCTGCTGATGCAGA...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGAGCTTCATCTGCTTCTaGGAGTTCCGATGCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: VYGREASASQTVTPEKLLSFICF*EFRCSS Trigger: GGAAGAGCATCGGAACTCGCAGAAGCAGATGAAGCT...CAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCTGCAGGAGCTTCATCTaGTTCTGCGAGTTCCGATGC | + |
Preference number: 4 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFCRSFI*FCEFRC Trigger: GCATCGGAACTCGCAGAAGCAGATGAAGCTCCTGCA...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGTGCAGGAGCTTCATCTaGTTCTGCGAGTTCCGATGC | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRCRSFI*FCEFRC Trigger: GCATCGGAACTCGCAGAAGCAGATGAAGCTCCTGCA...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTTTTCCACTAGCTGCTGCTaGAGGTCCTTATGTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: PNRPSSAHKKEESRPGCFSTSCC*RSLCLK Trigger: CTTCAAACATAAGGACCTGCAGCAGCAGCTAGTGGA...AAAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GAAATATCTCATCTTCCCAAGCAGGATACCTTGGCACCCACATGGCAAAGGACCGCGTCCACTAGCTGCTaGTGCAGGTCCTTATGTTTG | + |
Preference number: 4 (lower is better) Translates to: EISHLPKQDTLAPTWQRTASTSC*CRSLCL Trigger: CAAACATAAGGACCTGCAGCAGCAGCTAGTGGACGC...GGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGGGAAGATGAGATATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCGCGTCCACTAGCTGCTaGTGCAGGTCCTTATGTTTG | + |
Preference number: 4 (lower is better) Translates to: TAILVPGMSVLDLPASLGASTSC*CRSLCL Trigger: CAAACATAAGGACCTGCAGCAGCAGCTAGTGGACGC...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACCGCTGGATTTTCACCTaGAGGCCCTCCAGCTCTTTG | + |
Preference number: 4 (lower is better) Translates to: CQHNFKQVWVAKESSHGDRWIFT*RPSSSL Trigger: CAAAGAGCTGGAGGGCCTGCAGGTGAAAATCCAGCG...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGTTTCTTCTTCTCCTGTaGCCTCCGATGGTCTCGGTC | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRFLLLL*PPMVSV Trigger: GACCGAGACCATCGGAGGCCACAGGAGAAGAAGAAA...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCGAAGGATTCTCCTGCACGAGCTaGCTCTGCTTCTTCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: QEEVKSQGLTFWPRGFEGFSCTS*LCFFCR Trigger: CCTGCAGAAGAAGCAGAGCCAGCTCGTGCAGGAGAA...TCCTTCGAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GAAATATCTCATCTTCCCAAGCAGGATACCTTGGCACCCACATGGCAAAGGACCTCTCCTGGCGCAGCTTaGAGTTTCGCTCGTTATGCT | + |
Preference number: 4 (lower is better) Translates to: EISHLPKQDTLAPTWQRTSPGAA*SFARYA Trigger: AGCATAACGAGCGAAACTCCAAGCTGCGCCAGGAGA...GGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGGGAAGATGAGATATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCAGCTCCATATTCTCCTaGCGCAGCTTGGAGTTTCGC | + |
Preference number: 4 (lower is better) Translates to: TAILVPGMSVLDLPASLGSSIFS*RSLEFR Trigger: GCGAAACTCCAAGCTGCGCCAGGAGAATATGGAGCT...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 72 bp | TTCTCTGAAATATCTCATCTTCCCAAGCAGGATACCTaGGCACCCACATGGCAAAGGACCCTGACAGGGTGG | + |
Preference number: 4 (lower is better) Translates to: FSEISHLPKQDT*APTWQRTLTGW Trigger: CCACCCTGTCAGGGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGGGAAGATGAGATATTTCAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGATACTTCTTGCACAGTaGAGCCAGCTTCTCCTCTGG | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRILLAQ*SQLLLW Trigger: CCAGAGGAGAAGCTGGCTGCACTGTGCAAGAAGTAT...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCTTTAGGTGGGTCTCCTaGTGCTTCATCAGCTCGCAC | + |
Preference number: 4 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFFRWVS*CFISSH Trigger: GTGCGAGCTGATGAAGCAGCAGGAGACCCACCTAAA...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACTCTCCTGGCGCAGCTTaGAGTTTCGCTCGTTATGCT | + |
Preference number: 4 (lower is better) Translates to: CQHNFKQVWVAKESSHGDSPGAA*SFARYA Trigger: AGCATAACGAGCGAAACTCCAAGCTGCGCCAGGAGA...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGTGTCACCTGGAAGTGTaGAGTCACTTCTTTGCGCTT | + |
Preference number: 4 (lower is better) Translates to: WADFGKQSSCSDCRYGQRCHLEV*SHFFAL Trigger: AAGCGCAAAGAAGTGACTTCACACTTCCAGGTGACA...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | GAAATATCTCATCTTCCCAAGCAGGATACCTTGGCACCCACATGGCAAAGGACCTGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACC | + |
Preference number: 4 (lower is better) Translates to: EISHLPKQDTLAPTWQRTCSICS*MSFSVT Trigger: GGTGACACTGAATGACATTCAGCTGCAGATGGAACA...GGTCCTTTGCCATGTGGGTGCCAAGGTATCCTGCTTGGGAAGATGAGATATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTACTTTGGCCCCAGGCTGAGCTaGTTTAGCTCGAGCCCCCTC | + |
Preference number: 4 (lower is better) Translates to: GFKHMIISTRCFLPAVYFGPRLS*FSSSPL Trigger: GAGGGGGCTCGAGCTAAAGCAGCTCAGCCTGGGGCC...AAAGTAAACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GAAACTGACTCAACACCTTGGCAGGTGTGCAGTCACGAGAGCTTCAGCAGAGCCACACTTCACTGCTTTTaGAAAGTGTGTTCTGGAACT | + |
Preference number: 4 (lower is better) Translates to: ETDSTPWQVCSHESFSRATLHCF*KVCSGT Trigger: AGTTCCAGAACACACTTTCCAAAAGCAGTGAAGTGT...GGCTCTGCTGAAGCTCTCGTGACTGCACACCTGCCAAGGTGTTGAGTCAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGTTGGGGATCGATACATGGTaGTTTCTTTCTCCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: VYGREASASQTVTPEKLLGIDTW*FLSPAS Trigger: AGAAGCTGGAGAAAGAAACCACCATGTATCGATCCC...CAACAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | AAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGAGAAGGTAGAAGGACCGGGATCGATACATaGTGGTTTCTTTCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: KQSSCSDCRYGQRGEGRRTGIDT*WFLSPA Trigger: AGCTGGAGAAAGAAACCACCATGTATCGATCCCGGT...CCTTCTACCTTCTCCCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCTCCACTAGCTGCTGCTaGAGGTCCTTATGTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFSTSCC*RSLCLK Trigger: CTTCAAACATAAGGACCTGCAGCAGCAGCTAGTGGA...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCACCGGGATCGATACATaGTGGTTTCTTTCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFTGIDT*WFLSPA Trigger: AGCTGGAGAAAGAAACCACCATGTATCGATCCCGGT...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGCAGGTCCTTATGTTTaGAGACTTTGTCGATATGCT | + |
Preference number: 4 (lower is better) Translates to: WADFGKQSSCSDCRYGQRAGPYV*RLCRYA Trigger: AGCATATCGACAAAGTCTTCAAACATAAGGACCTGC...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | GGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTACTTTGGAGAGCTGGCTGGTTaGGCCCCAGGACTTTCAACC | + |
Preference number: 4 (lower is better) Translates to: GFKHMIISTRCFLPAVYFGELAG*APGLST Trigger: GGTTGAAAGTCCTGGGGCTCAACCAGCCAGCTCTCC...AAAGTAAACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGTCATTCAGTGTCACCTaGAAGTGTGAAGTCACTTCT | + |
Preference number: 4 (lower is better) Translates to: WADFGKQSSCSDCRYGQRSFSVT*KCEVTS Trigger: AGAAGTGACTTCACACTTCCAGGTGACACTGAATGA...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACGGGATCGATACATGGTaGTTTCTTTCTCCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: CQHNFKQVWVAKESSHGDGIDTW*FLSPAS Trigger: AGAAGCTGGAGAAAGAAACCACCATGTATCGATCCC...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GGACTATTTAATGTAAAATTCATCAATAGCAAGTCCCTGGCTGCTGCCAATTCCTTTAGGTGGGTCTCCTaGTGCTTCATCAGCTCGCAC | + |
Preference number: 4 (lower is better) Translates to: GLFNVKFINSKSLAAANSFRWVS*CFISSH Trigger: GTGCGAGCTGATGAAGCAGCAGGAGACCCACCTAAA...GGAATTGGCAGCAGCCAGGGACTTGCTATTGATGAATTTTACATTAAATAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
||
CDS-3UTR GCA 90 bp | GGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTACTTTTCATTGCGCTCGGTCTaGAGTGCTCGGCACAGCTTC | + |
Preference number: 4 (lower is better) Translates to: GFKHMIISTRCFLPAVYFSLRSV*SARHSF Trigger: GAAGCTGTGCCGAGCACTGCAGACCGAGCGCAATGA...AAAGTAAACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCTCATTCAGTGTCACCTaGAAGTGTGAAGTCACTTCT | + |
Preference number: 4 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFSFSVT*KCEVTS Trigger: AGAAGTGACTTCACACTTCCAGGTGACACTGAATGA...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACACACTTCACTGCTTTTaGAAAGTGTGTTCTGGAACT | + |
Preference number: 4 (lower is better) Translates to: CQHNFKQVWVAKESSHGDTLHCF*KVCSGT Trigger: AGTTCCAGAACACACTTTCCAAAAGCAGTGAAGTGT...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | GGACTATTTAATGTAAAATTCATCAATAGCAAGTCCCTGGCTGCTGCCAATTCCTGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACC | + |
Preference number: 4 (lower is better) Translates to: GLFNVKFINSKSLAAANSCSICS*MSFSVT Trigger: GGTGACACTGAATGACATTCAGCTGCAGATGGAACA...GGAATTGGCAGCAGCCAGGGACTTGCTATTGATGAATTTTACATTAAATAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CCA 90 bp | GGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTACTTTAGCTGCTGCTTTAGGTaGGTCTCCTGCTGCTTCATC | + |
Preference number: 4 (lower is better) Translates to: GFKHMIISTRCFLPAVYFSCCFR*VSCCFI Trigger: GATGAAGCAGCAGGAGACCCACCTAAAGCAGCAGCT...AAAGTAAACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR GCA 90 bp | GGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTTACTTTAGCTTCATCTGCTTCTaGGAGTTCCGATGCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: GFKHMIISTRCFLPAVYFSFICF*EFRCSS Trigger: GGAAGAGCATCGGAACTCGCAGAAGCAGATGAAGCT...AAAGTAAACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR TCA 90 bp | ATTTCTGGATTTAAACACATGATCATCAGCACGAGATGTTTTCTTCCAGCTGTTGCAGGTCCTTATGTTTaGAGACTTTGTCGATATGCT | + |
Preference number: 4 (lower is better) Translates to: ISGFKHMIISTRCFLPAVAGPYV*RLCRYA Trigger: AGCATATCGACAAAGTCTTCAAACATAAGGACCTGC...AACAGCTGGAAGAAAACATCTCGTGCTGATGATCATGTGTTTAAATCCAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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3UTR CAA 72 bp | CTGAGGACCACTGCTAGAGTATCCCTGTTCCTTCCTTaGAAGTTCTTTAATACAAACTCTTATGCAAAACAA | + |
Preference number: 4 (lower is better) Translates to: LRTTARVSLFLP*KFFNTNSYAKQ Trigger: TTGTTTTGCATAAGAGTTTGTATTAAAGAACTTCAAAGGAAGGAACAGGGATACTCTAGCAGTGGTCCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 90 bp | GAACCTTCGGCTTCCGCCCCAGGAGCTGTCTGTCTGGGTCGTCCATaGGCTCCCTCCGGTCCTGCTTCCCGTTGCCCCGGGCTGCCCTTC | + |
Preference number: 5 (lower is better) Translates to: EPSASAPGAVCLGRP*APSGPASRCPGLPF Trigger: GAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGACAGCTCCTGGGGCGGAAGCCGAAGGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CCA 90 bp | CCTGGCTTGTGGAACCTTCGGCTTCCGCCCCAGGAGCTGTCTGTCTaGGTCGTCCATGGGCTCCCTCCGGTCCTGCTTCCCGTTGCCCCG | + |
Preference number: 5 (lower is better) Translates to: PGLWNLRLPPQELSV*VVHGLPPVLLPVAP Trigger: CGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGACAGCTCCTGGGGCGGAAGCCGAAGGTTCCACAAGCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 90 bp | CCCAGGAGCTGTCTGTCTGGGTCGTCCATGGGCTCCCTCCGGTCCTaGTTCCCGTTGCCCCGGGCTGCCCTTCGAGTTGGAGTGTTTGGC | + |
Preference number: 5 (lower is better) Translates to: PRSCLSGSSMGSLRS*FPLPRAALRVGVFG Trigger: GCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGACAGCTCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS TCA 90 bp | AACTGCCGGCTCAGCTCCTCAGAGACGTCACAGAGGGCCCCAGGCTaGGCTGCTTTAGCTCGAGCCCCCTCGGTCTTCCCAGGAGCCTGG | + |
Preference number: 5 (lower is better) Translates to: NCRLSSSETSQRAPG*AALARAPSVFPGAW Trigger: CCAGGCTCCTGGGAAGACCGAGGGGGCTCGAGCTAAAGCAGCTCAGCCTGGGGCCCTCTGTGACGTCTCTGAGGAGCTGAGCCGGCAGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 90 bp | GTCTGTCTGGGTCGTCCATGGGCTCCCTCCGGTCCTGCTTCCCGTTaGCCCGGGCTGCCCTTCGAGTTGGAGTGTTTGGCAGGCCCATTC | + |
Preference number: 5 (lower is better) Translates to: VCLGRPWAPSGPASR*PGLPFELECLAGPF Trigger: GAATGGGCCTGCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 90 bp | CCGGCTCAGCTCCTCAGAGACGTCACAGAGGGCCCCAGGCTGAGCTaGTTTAGCTCGAGCCCCCTCGGTCTTCCCAGGAGCCTGGCTTGT | + |
Preference number: 5 (lower is better) Translates to: PAQLLRDVTEGPRLS*FSSSPLGLPRSLAC Trigger: ACAAGCCAGGCTCCTGGGAAGACCGAGGGGGCTCGAGCTAAAGCAGCTCAGCCTGGGGCCCTCTGTGACGTCTCTGAGGAGCTGAGCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS-3UTR CAA 90 bp | CCCTGGGCTGCTCCGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGGGCTGCTCACAGACTCTCAAGCTaGCTTCGGGCCAGGACAGCC | + |
Preference number: 5 (lower is better) Translates to: PWAAPCGSLAWTRPDWAAHRLSS*LRARTA Trigger: GGCTGTCCTGGCCCGAAGCAAGCTTGAGAGTCTGTG...AGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 90 bp | TCCTGGCTGCATAGGTTCGGGACTTCTCCGTGTCTTCCGGCTCAGTaGGCTCACCCTGTGCTCCCTCCTCAGCCGGGCCTCCCTGATTGT | + |
Preference number: 5 (lower is better) Translates to: SWLHRFGTSPCLPAQ*AHPVLPPQPGLPDC Trigger: ACAATCAGGGAGGCCCGGCTGAGGAGGGAGCACAGGGTGAGCCCACTGAGCCGGAAGACACGGAGAAGTCCCGAACCTATGCAGCCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS-3UTR CAA 90 bp | CCCTGGGCTGCTCCGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGGGCTGCTATCTCCAGCAGAGCCTaGTTGCTGCTTTCCCACCGG | + |
Preference number: 5 (lower is better) Translates to: PWAAPCGSLAWTRPDWAAISSRA*LLLSHR Trigger: CCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGAGAT...AGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 90 bp | GGTTCGGGACTTCTCCGTGTCTTCCGGCTCAGTGGGCTCACCCTGTaGTCCCTCCTCAGCCGGGCCTCCCTGATTGTTGTCCACACAGTA | + |
Preference number: 5 (lower is better) Translates to: GSGLLRVFRLSGLTL*SLLSRASLIVVHTV Trigger: TACTGTGTGGACAACAATCAGGGAGGCCCGGCTGAGGAGGGAGCACAGGGTGAGCCCACTGAGCCGGAAGACACGGAGAAGTCCCGAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CCA 90 bp | GGCTCCCGAGCAGCAAGGAGCGTCTGTGGCCCTTGGAGAGCTGGCTaGTTGAGCCCCAGGACTTTCAACCCCTTGTTCCTTGGAGGCAGT | + |
Preference number: 5 (lower is better) Translates to: GSRAARSVCGPWRAG*LSPRTFNPLFLGGS Trigger: ACTGCCTCCAAGGAACAAGGGGTTGAAAGTCCTGGGGCTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCTCCTTGCTGCTCGGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | GGTGTGCAGTCACGAGAGCTTCAGCAGAGCCCCGAGACCACAGTAACACTGAGGTGGGCCTGCTGGAGCTaGGCGTCCACTAGCTGCTGC | + |
Preference number: 5 (lower is better) Translates to: GVQSRELQQSPETTVTLRWACWS*ASTSCC Trigger: GCAGCAGCTAGTGGACGCCAAGCTCCAGCAGGCCCA...CCTCAGTGTTACTGTGGTCTCGGGGCTCTGCTGAAGCTCTCGTGACTGCACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGGGCTGCTGCTCCTGTCCCAGAGGCCCTCCAGCTCTTaGTCCCGGACGGTTTTCTCT | + |
Preference number: 5 (lower is better) Translates to: RVEALHGRGLTGLLLLSQRPSSS*SRTVFS Trigger: AGAGAAAACCGTCCGGGACAAAGAGCTGGAGGGCCT...CTGGGACAGGAGCAGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 90 bp | GTCGTCCATGGGCTCCCTCCGGTCCTGCTTCCCGTTGCCCCGGGCTaGCCTTCGAGTTGGAGTGTTTGGCAGGCCCATTCTTTTTGTCTT | + |
Preference number: 5 (lower is better) Translates to: VVHGLPPVLLPVAPG*PSSWSVWQAHSFCL Trigger: AAGACAAAAAGAATGGGCCTGCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 90 bp | GCCGTTGACGACTGGAATGCCTGGTTCAGGCTCCCCATTCCTGGCTaGATAGGTTCGGGACTTCTCCGTGTCTTCCGGCTCAGTGGGCTC | + |
Preference number: 5 (lower is better) Translates to: AVDDWNAWFRLPIPG*IGSGLLRVFRLSGL Trigger: GAGCCCACTGAGCCGGAAGACACGGAGAAGTCCCGAACCTATGCAGCCAGGAATGGGGAGCCTGAACCAGGCATTCCAGTCGTCAACGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 90 bp | GGTGGCCTCTGGCCTCCGCTCAGAGCCAATGTCAGTGATGCCCCCTaGAGTCAGGTCCTGTACCCTCTTGTTGAGGTCATTGCGCTCGGT | + |
Preference number: 5 (lower is better) Translates to: GGLWPPLRANVSDAP*SQVLYPLVEVIALG Trigger: ACCGAGCGCAATGACCTCAACAAGAGGGTACAGGACCTGACTGCAGGGGGCATCACTGACATTGGCTCTGAGCGGAGGCCAGAGGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 90 bp | CCCAGGACTTTCAACCCCTTGTTCCTTGGAGGCAGTGGTGGCCTCTaGCCTCCGCTCAGAGCCAATGTCAGTGATGCCCCCTGCAGTCAG | + |
Preference number: 5 (lower is better) Translates to: PRTFNPLFLGGSGGL*PPLRANVSDAPCSQ Trigger: CTGACTGCAGGGGGCATCACTGACATTGGCTCTGAGCGGAGGCCAGAGGCCACCACTGCCTCCAAGGAACAAGGGGTTGAAAGTCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CCCTGGGCTGCTCCGTGTGGAAGCCTTGCATGGACGAGGCCTGACTGGGCTGCTAGGACTTTCAACCCCTaGTTCCTTGGAGGCAGTGGT | + |
Preference number: 5 (lower is better) Translates to: PWAAPCGSLAWTRPDWAARTFNP*FLGGSG Trigger: ACCACTGCCTCCAAGGAACAAGGGGTTGAAAGTCCT...AGCAGCCCAGTCAGGCCTCGTCCATGCAAGGCTTCCACACGGAGCAGCCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CACACCTCTGAGATGGAGGTGAGGGGCAGGAGCCAAGAAACGACCATGCGCCAAGAGCGTCTGTGGCCCTaGGAGAGCTGGCTGGTTGAG | + |
Preference number: 5 (lower is better) Translates to: HTSEMEVRGRSQETTMRQERLWP*ESWLVE Trigger: CTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCTC...TTGGCGCATGGTCGTTTCTTGGCTCCTGCCCCTCACCTCCATCTCAGAGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 90 bp | CAGGTCCTGTACCCTCTTGTTGAGGTCATTGCGCTCGGTCTGCAGTaGTCGGCACAGCTTCTCCAGCCGCTGGATTTTCACCTGCAGGCC | + |
Preference number: 5 (lower is better) Translates to: QVLYPLVEVIALGLQ*SAQLLQPLDFHLQA Trigger: GGCCTGCAGGTGAAAATCCAGCGGCTGGAGAAGCTGTGCCGAGCACTGCAGACCGAGCGCAATGACCTCAACAAGAGGGTACAGGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 90 bp | TTCTCCGTGTACAGGGCGAGCTGCTGCTTTAGGTGGGTCTCCTGCTaGTTCATCAGCTCGCACATCCTCTGGGACTCCACCGCTTCCTTC | + |
Preference number: 5 (lower is better) Translates to: FSVYRASCCFRWVSC*FISSHILWDSTASF Trigger: GAAGGAAGCGGTGGAGTCCCAGAGGATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCTAAAGCAGCAGCTCGCCCTGTACACGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 90 bp | AACTTCTCCGTGTACAGGGCGAGCTGCTGCTTTAGGTGGGTCTCCTaGTGCTTCATCAGCTCGCACATCCTCTGGGACTCCACCGCTTCC | + |
Preference number: 5 (lower is better) Translates to: NFSVYRASCCFRWVS*CFISSHILWDSTAS Trigger: GGAAGCGGTGGAGTCCCAGAGGATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCTAAAGCAGCAGCTCGCCCTGTACACGGAGAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CTGCCCCACAAAGACTCTGCCAGGGACACCATTCCCAGGTTAAGAGAAGCAATGCGGGCCAGGACAGCCTaGCTGTGTTCCCCTCGCAGA | + |
Preference number: 5 (lower is better) Translates to: LPHKDSARDTIPRLREAMRARTA*LCSPRR Trigger: TCTGCGAGGGGAACACAGCAAGGCTGTCCTGGCCCG...CATTGCTTCTCTTAACCTGGGAATGGTGTCCCTGGCAGAGTCTTTGTGGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 90 bp | CCTCGCAGATGGTCCTTCTCCTGCACGAGCTGGCTCTGCTTCTTCTaGAGGAGCTTCATCTGCTTCTGCGAGTTCCGATGCTCTTCCAGC | + |
Preference number: 5 (lower is better) Translates to: PRRWSFSCTSWLCFF*RSFICFCEFRCSSS Trigger: GCTGGAAGAGCATCGGAACTCGCAGAAGCAGATGAAGCTCCTGCAGAAGAAGCAGAGCCAGCTCGTGCAGGAGAAGGACCATCTGCGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CCA 90 bp | CTCTCCCTTAGAGGTCTCCTTCTCGCCGTTGACGACTGGAATGCCTaGTTCAGGCTCCCCATTCCTGGCTGCATAGGTTCGGGACTTCTC | + |
Preference number: 5 (lower is better) Translates to: LSLRGLLLAVDDWNA*FRLPIPGCIGSGLL Trigger: GAGAAGTCCCGAACCTATGCAGCCAGGAATGGGGAGCCTGAACCAGGCATTCCAGTCGTCAACGGCGAGAAGGAGACCTCTAAGGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CCA 90 bp | TGTTCCAGGCTCTCCCTTAGAGGTCTCCTTCTCGCCGTTGACGACTaGAATGCCTGGTTCAGGCTCCCCATTCCTGGCTGCATAGGTTCG | + |
Preference number: 5 (lower is better) Translates to: CSRLSLRGLLLAVDD*NAWFRLPIPGCIGS Trigger: CGAACCTATGCAGCCAGGAATGGGGAGCCTGAACCAGGCATTCCAGTCGTCAACGGCGAGAAGGAGACCTCTAAGGGAGAGCCTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS-3UTR CAA 90 bp | GGTGTGCAGTCACGAGAGCTTCAGCAGAGCCCCGAGACCACAGTAACACTGAGGTCCTGTACCCTCTTGTaGAGGTCATTGCGCTCGGTC | + |
Preference number: 5 (lower is better) Translates to: GVQSRELQQSPETTVTLRSCTLL*RSLRSV Trigger: GACCGAGCGCAATGACCTCAACAAGAGGGTACAGGA...CCTCAGTGTTACTGTGGTCTCGGGGCTCTGCTGAAGCTCTCGTGACTGCACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGGGGCTGCCCTTCGAGTaGGAGTGTTTGGCAGGCCCA | + |
Preference number: 5 (lower is better) Translates to: SVYGREASASQTVTPEKLGLPFE*ECLAGP Trigger: TGGGCCTGCCAAACACTCCAACTCGAAGGGCAGCCC...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCTGGGCCTGCTGGAGCTaGGCGTCCACTAGCTGCTGC | + |
Preference number: 5 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFWACWS*ASTSCC Trigger: GCAGCAGCTAGTGGACGCCAAGCTCCAGCAGGCCCA...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGTCAACCCCTTGTTCCTaGGAGGCAGTGGTGGCCTCT | + |
Preference number: 5 (lower is better) Translates to: SALPWVPTSGWRESQGSLSTPCS*EAVVAS Trigger: AGAGGCCACCACTGCCTCCAAGGAACAAGGGGTTGA...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGGGCTGCCCTTCGAGTaGGAGTGTTTGGCAGGCCCA | + |
Preference number: 5 (lower is better) Translates to: WADFGKQSSCSDCRYGQRGLPFE*ECLAGP Trigger: TGGGCCTGCCAAACACTCCAACTCGAAGGGCAGCCC...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCGAAGGACGGGCCAGGACAGCCTaGCTGTGTTCCCCTCGCAGA | + |
Preference number: 5 (lower is better) Translates to: QEEVKSQGLTFWPRGFEGRARTA*LCSPRR Trigger: TCTGCGAGGGGAACACAGCAAGGCTGTCCTGGCCCG...TCCTTCGAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGCCTGGGTGCTTTATCTCCAGCAGAGCCTaGTTGCTGCTTTCCCACCGG | + |
Preference number: 5 (lower is better) Translates to: PNRPSSAHKKEESRPGCFISSRA*LLLSHR Trigger: CCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGAGAT...AAAGCACCCAGGCCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGAGGTCCTGTACCCTCTaGTTGAGGTCATTGCGCTCG | + |
Preference number: 5 (lower is better) Translates to: SALPWVPTSGWRESQGSLRSCTL*LRSLRS Trigger: CGAGCGCAATGACCTCAACAAGAGGGTACAGGACCT...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCGAGCGTCTGTGGCCCTaGGAGAGCTGGCTGGTTGAG | + |
Preference number: 5 (lower is better) Translates to: TAILVPGMSVLDLPASLGERLWP*ESWLVE Trigger: CTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCTC...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 90 bp | AGTGCAGCCAGCTTCTCCTCTGGGGTACTCAGCGTGTTCAGTGTCTaGATCAGCAGAGTGATCTCCTTCCCTAGACCCTTGGCTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: SAASFSSGVLSVFSV*ISRVISFPRPLAFF Trigger: GAAGAAAGCCAAGGGTCTAGGGAAGGAGATCACTCTGCTGATGCAGACACTGAACACGCTGAGTACCCCAGAGGAGAAGCTGGCTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 90 bp | GCTGAATGTCATTCAGTGTCACCTGGAAGTGTGAAGTCACTTCTTTaGGCTTCTCCTCCTCCTCACGGGCTCGCTGCACGCCTTCTTCCT | + |
Preference number: 5 (lower is better) Translates to: AECHSVSPGSVKSLL*ASPPPHGLAARLLP Trigger: AGGAAGAAGGCGTGCAGCGAGCCCGTGAGGAGGAGGAGAAGCGCAAAGAAGTGACTTCACACTTCCAGGTGACACTGAATGACATTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000133803.8 |
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CDS GCA 90 bp | CCCGGACGGTTTTCTCTTCAGCCATCTCCAGCAGAGCCTTGTTGCTaGTTTCCCACCGGGATCGATACATGGTGGTTTCTTTCTCCAGCT | + |
Preference number: 5 (lower is better) Translates to: PGRFSLQPSPAEPCC*FPTGIDTWWFLSPA Trigger: AGCTGGAGAAAGAAACCACCATGTATCGATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGAGATGGCTGAAGAGAAAACCGTCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGTCCAGCAGAGCCTTGTaGCTGCTTTCCCACCGGGAT | + |
Preference number: 5 (lower is better) Translates to: GLTLESRAAVVTVDMVRGSSRAL*LLSHRD Trigger: ATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGA...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGAGGCCCTCCAGCTCTTaGTCCCGGACGGTTTTCTCT | + |
Preference number: 5 (lower is better) Translates to: GLTLESRAAVVTVDMVRGRPSSS*SRTVFS Trigger: AGAGAAAACCGTCCGGGACAAAGAGCTGGAGGGCCT...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TCTGCATTGCCCTGGGTGCCTACAAGTGGATGGAGGGAAAGCCAAGGTTCTCTGAGGACTTTCAACCCCTaGTTCCTTGGAGGCAGTGGT | + |
Preference number: 5 (lower is better) Translates to: SALPWVPTSGWRESQGSLRTFNP*FLGGSG Trigger: ACCACTGCCTCCAAGGAACAAGGGGTTGAAAGTCCT...CAGAGAACCTTGGCTTTCCCTCCATCCACTTGTAGGCACCCAGGGCAATGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS TCA 90 bp | CTGTTCCATCTGCAGCTGAATGTCATTCAGTGTCACCTGGAAGTGTaGAGTCACTTCTTTGCGCTTCTCCTCCTCCTCACGGGCTCGCTG | + |
Preference number: 5 (lower is better) Translates to: LFHLQLNVIQCHLEV*SHFFALLLLLTGSL Trigger: CAGCGAGCCCGTGAGGAGGAGGAGAAGCGCAAAGAAGTGACTTCACACTTCCAGGTGACACTGAATGACATTCAGCTGCAGATGGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000133803.8 |
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CDS CCA 90 bp | TGCTCGATCAACTTCTTGAGCCTCTCGGCTAGCTCCATATTCTCCTaGCGCAGCTTGGAGTTTCGCTCGTTATGCTGTTCCATCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: CSINFLSLSASSIFS*RSLEFRSLCCSICS Trigger: GCTGCAGATGGAACAGCATAACGAGCGAAACTCCAAGCTGCGCCAGGAGAATATGGAGCTAGCCGAGAGGCTCAAGAAGTTGATCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | AGGGACGAGAGCCCAAATCGCCCAAGTTCTGCTCACAAAAAGGAGGAGTCCAGGTCCTTCCCTAGACCCTaGGCTTTCTTCTTCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: RDESPNRPSSAHKKEESRSFPRP*AFFFSC Trigger: ACAGGAGAAGAAGAAAGCCAAGGGTCTAGGGAAGGA...CCTGGACTCCTCCTTTTTGTGAGCAGAACTTGGGCGATTTGGGCTCTCGTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TCAGTGTATGGAAGAGAAGCCTCAGCTTCCCAGACGGTCACTCCAGAAAAGCTGCTCTTGTTGAGGTCATaGCGCTCGGTCTGCAGTGCT | + |
Preference number: 5 (lower is better) Translates to: SVYGREASASQTVTPEKLLLLRS*RSVCSA Trigger: AGCACTGCAGACCGAGCGCAATGACCTCAACAAGAG...CAGCTTTTCTGGAGTGACCGTCTGGGAAGCTGAGGCTTCTCTTCCATACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | GACCTTGGGAGAAATTCCACAGGACAACAGATTCCAGCTGGAGATGGCAAAGCCAGCTCAGCATACTTCTaGCACAGTGCAGCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: DLGRNSTGQQIPAGDGKASSAYF*HSAASF Trigger: GAAGCTGGCTGCACTGTGCAAGAAGTATGCTGAGCT...GGCTTTGCCATCTCCAGCTGGAATCTGTTGTCCTGTGGAATTTCTCCCAAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCTCCAGCAGAGCCTTGTaGCTGCTTTCCCACCGGGAT | + |
Preference number: 5 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFSSRAL*LLSHRD Trigger: ATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGA...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | GTCTCCTGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTTCCTGTACCCTCTTGTaGAGGTCATTGCGCTCGGTC | + |
Preference number: 5 (lower is better) Translates to: VSWADFGKQSSCSDCRYGSCTLL*RSLRSV Trigger: GACCGAGCGCAATGACCTCAACAAGAGGGTACAGGA...ACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCAGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TGGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGAGGTCCTGTACCCTCTaGTTGAGGTCATTGCGCTCG | + |
Preference number: 5 (lower is better) Translates to: WADFGKQSSCSDCRYGQRRSCTL*LRSLRS Trigger: CGAGCGCAATGACCTCAACAAGAGGGTACAGGACCT...CCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | TGTCAGCACAACTTCAAACAAGTATGGGTGGCAAAGGAAAGCAGTCATGGGGACTCAACCCCTTGTTCCTaGGAGGCAGTGGTGGCCTCT | + |
Preference number: 5 (lower is better) Translates to: CQHNFKQVWVAKESSHGDSTPCS*EAVVAS Trigger: AGAGGCCACCACTGCCTCCAAGGAACAAGGGGTTGA...GTCCCCATGACTGCTTTCCTTTGCCACCCATACTTGTTTGAAGTTGTGCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGTCCTTCCCTAGACCCTaGGCTTTCTTCTTCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRSFPRP*AFFFSC Trigger: ACAGGAGAAGAAGAAAGCCAAGGGTCTAGGGAAGGA...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CTTAGGCAGGAAGAAGTGAAATCCCAAGGACTCACTTTTTGGCCAAGAGGGTTCCTCTTGTTGAGGTCATaGCGCTCGGTCTGCAGTGCT | + |
Preference number: 5 (lower is better) Translates to: LRQEEVKSQGLTFWPRGFLLLRS*RSVCSA Trigger: AGCACTGCAGACCGAGCGCAATGACCTCAACAAGAG...GAACCCTCTTGGCCAAAAAGTGAGTCCTTGGGATTTCACTTCTTCCTGCCTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS TCA 90 bp | TGGCGCAGCTTGGAGTTTCGCTCGTTATGCTGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACCTGGAAGTGTGAAGTCACTTCTTTG | + |
Preference number: 5 (lower is better) Translates to: WRSLEFRSLCCSICS*MSFSVTWKCEVTSL Trigger: CAAAGAAGTGACTTCACACTTCCAGGTGACACTGAATGACATTCAGCTGCAGATGGAACAGCATAACGAGCGAAACTCCAAGCTGCGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CAGACGGTCACTCCAGAAAAGCTGTTGTGGAAACTGACTCAACACCTTGGCAGGAACACTTCACTGCTTTaGGAAAGTGTGTTCTGGAAC | + |
Preference number: 5 (lower is better) Translates to: QTVTPEKLLWKLTQHLGRNTSLL*ESVFWN Trigger: GTTCCAGAACACACTTTCCAAAAGCAGTGAAGTGTT...CCTGCCAAGGTGTTGAGTCAGTTTCCACAACAGCTTTTCTGGAGTGACCGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | GGGCTGACTTTGGAAAGCAGAGCAGCTGTAGTGACTGTAGATATGGTCAGAGGGTTATGTTTGAAGACTTaGTCGATATGCTCCTCACGA | + |
Preference number: 5 (lower is better) Translates to: GLTLESRAAVVTVDMVRGLCLKT*SICSSR Trigger: TCGTGAGGAGCATATCGACAAAGTCTTCAAACATAA...CCCTCTGACCATATCTACAGTCACTACAGCTGCTCTGCTTTCCAAAGTCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCTGCAGGTCCTTATGTTaGAAGACTTTGTCGATATGC | + |
Preference number: 5 (lower is better) Translates to: TAILVPGMSVLDLPASLGCRSLC*KTLSIC Trigger: GCATATCGACAAAGTCTTCAAACATAAGGACCTGCA...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | ACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTGACCTACCAGCCAGCTTAGGCAACACTTCACTGCTTTaGGAAAGTGTGTTCTGGAAC | + |
Preference number: 5 (lower is better) Translates to: TAILVPGMSVLDLPASLGNTSLL*ESVFWN Trigger: GTTCCAGAACACACTTTCCAAAAGCAGTGAAGTGTT...GCCTAAGCTGGCTGGTAGGTCAAGAACAGACATCCCAGGAACCAAAATAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | AGGGACGGTGAAGACAACTCCTCACAGCTATTTTGGTTCCTGGGATGTCTGTTCTTTTCCATCTCCTGTTaGAACGTGGTGAACACTTCA | + |
Preference number: 5 (lower is better) Translates to: RDGEDNSSQLFWFLGCLFFSISC*NVVNTS Trigger: TGAAGTGTTCACCACGTTCAAACAGGAGATGGAAAA...GAACAGACATCCCAGGAACCAAAATAGCTGTGAGGAGTTGTCTTCACCGTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | CAGCTGTTTACTTTTTGGTTTCCTGACAAGGGGTCCTGCTTCCTAGCTCTGCTGTTATGTTTGAAGACTTaGTCGATATGCTCCTCACGA | + |
Preference number: 5 (lower is better) Translates to: QLFTFWFPDKGSCFLALLLCLKT*SICSSR Trigger: TCGTGAGGAGCATATCGACAAAGTCTTCAAACATAA...CAGCAGAGCTAGGAAGCAGGACCCCTTGTCAGGAAACCAAAAAGTAAACAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS-3UTR CAA 90 bp | GGACTATTTAATGTAAAATTCATCAATAGCAAGTCCCTGGCTGCTGCCAATTCCTTTTCCATCTCCTGTTaGAACGTGGTGAACACTTCA | + |
Preference number: 5 (lower is better) Translates to: GLFNVKFINSKSLAAANSFSISC*NVVNTS Trigger: TGAAGTGTTCACCACGTTCAAACAGGAGATGGAAAA...GGAATTGGCAGCAGCCAGGGACTTGCTATTGATGAATTTTACATTAAATAGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | GCTTCCGCCCCAGGAGCTGTCTGTCTGGGTCGTCCATaGGCTCCCTCCGGTCCTGCTTCCCGTTGCCCCGGG | + |
Preference number: 6 (lower is better) Translates to: ASAPGAVCLGRP*APSGPASRCPG Trigger: CCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGACAGCTCCTGGGGCGGAAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CAA 72 bp | GGGTCGTCCATGGGCTCCCTCCGGTCCTGCTTCCCGTaGCCCCGGGCTGCCCTTCGAGTTGGAGTGTTTGGC | + |
Preference number: 6 (lower is better) Translates to: GSSMGSLRSCFP*PRAALRVGVFG Trigger: GCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | GGGCTCCCTCCGGTCCTGCTTCCCGTTGCCCCGGGCTaGCCTTCGAGTTGGAGTGTTTGGCAGGCCCATTCT | + |
Preference number: 6 (lower is better) Translates to: GLPPVLLPVAPG*PSSWSVWQAHS Trigger: AGAATGGGCCTGCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | GGTCGTCCATGGGCTCCCTCCGGTCCTGCTTCCCGTTaGCCCGGGCTGCCCTTCGAGTTGGAGTGTTTGGCA | + |
Preference number: 6 (lower is better) Translates to: GRPWAPSGPASR*PGLPFELECLA Trigger: TGCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | TGTCTGTCTGGGTCGTCCATGGGCTCCCTCCGGTCCTaGTTCCCGTTGCCCCGGGCTGCCCTTCGAGTTGGA | + |
Preference number: 6 (lower is better) Translates to: CLSGSSMGSLRS*FPLPRAALRVG Trigger: TCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CCA 72 bp | TGGAACCTTCGGCTTCCGCCCCAGGAGCTGTCTGTCTaGGTCGTCCATGGGCTCCCTCCGGTCCTGCTTCCC | + |
Preference number: 6 (lower is better) Translates to: WNLRLPPQELSV*VVHGLPPVLLP Trigger: GGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGACAGCTCCTGGGGCGGAAGCCGAAGGTTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | CTCCTCAGAGACGTCACAGAGGGCCCCAGGCTGAGCTaGTTTAGCTCGAGCCCCCTCGGTCTTCCCAGGAGC | + |
Preference number: 6 (lower is better) Translates to: LLRDVTEGPRLS*FSSSPLGLPRS Trigger: GCTCCTGGGAAGACCGAGGGGGCTCGAGCTAAAGCAGCTCAGCCTGGGGCCCTCTGTGACGTCTCTGAGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CAA 72 bp | CGGGCTCGCTGCACGCCTTCTTCCTTCAGGGACCGGTaGTGCCGTTGCAGCTCCCGGCACAGACTCTCAAGC | + |
Preference number: 6 (lower is better) Translates to: RARCTPSSFRDR*CRCSSRHRLSS Trigger: GCTTGAGAGTCTGTGCCGGGAGCTGCAACGGCACAACCGGTCCCTGAAGGAAGAAGGCGTGCAGCGAGCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000133803.8 |
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CDS CAA 90 bp | TGTCTGTCTGGGTCGTCCATGGGCTCCCTCCGGTCCTGCTTCCCGTaGCCCCGGGCTGCCCTTCGAGTTGGAGTGTTTGGCAGGCCCATT | + |
Preference number: 6 (lower is better) Translates to: CLSGSSMGSLRSCFP*PRAALRVGVFGRPI Trigger: AATGGGCCTGCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACCGGAGGGAGCCCATGGACGACCCAGACAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | CTTCTCCGTGTCTTCCGGCTCAGTGGGCTCACCCTGTaGTCCCTCCTCAGCCGGGCCTCCCTGATTGTTGTC | + |
Preference number: 6 (lower is better) Translates to: LLRVFRLSGLTL*SLLSRASLIVV Trigger: GACAACAATCAGGGAGGCCCGGCTGAGGAGGGAGCACAGGGTGAGCCCACTGAGCCGGAAGACACGGAGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CAA 72 bp | AGAGCTGGCTGGTTGAGCCCCAGGACTTTCAACCCCTaGTTCCTTGGAGGCAGTGGTGGCCTCTGGCCTCCG | + |
Preference number: 6 (lower is better) Translates to: RAGWLSPRTFNP*FLGGSGGLWPP Trigger: CGGAGGCCAGAGGCCACCACTGCCTCCAAGGAACAAGGGGTTGAAAGTCCTGGGGCTCAACCAGCCAGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CAA 90 bp | TCCCGAGCAGCAAGGAGCGTCTGTGGCCCTTGGAGAGCTGGCTGGTaGAGCCCCAGGACTTTCAACCCCTTGTTCCTTGGAGGCAGTGGT | + |
Preference number: 6 (lower is better) Translates to: SRAARSVCGPWRAGW*SPRTFNPLFLGGSG Trigger: ACCACTGCCTCCAAGGAACAAGGGGTTGAAAGTCCTGGGGCTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCTCCTTGCTGCTCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS TCA 72 bp | TGGTGGCCTCTGGCCTCCGCTCAGAGCCAATGTCAGTaGTGCCCCCTGCAGTCAGGTCCTGTACCCTCTTGT | + |
Preference number: 6 (lower is better) Translates to: WWPLASAQSQCQ*CPLQSGPVPSC Trigger: ACAAGAGGGTACAGGACCTGACTGCAGGGGGCATCACTGACATTGGCTCTGAGCGGAGGCCAGAGGCCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | TCGGTCTGCAGTGCTCGGCACAGCTTCTCCAGCCGCTaGATTTTCACCTGCAGGCCCTCCAGCTCTTTGTCC | + |
Preference number: 6 (lower is better) Translates to: SVCSARHSFSSR*IFTCRPSSSLS Trigger: GGACAAAGAGCTGGAGGGCCTGCAGGTGAAAATCCAGCGGCTGGAGAAGCTGTGCCGAGCACTGCAGACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | TTCAACCCCTTGTTCCTTGGAGGCAGTGGTGGCCTCTaGCCTCCGCTCAGAGCCAATGTCAGTGATGCCCCC | + |
Preference number: 6 (lower is better) Translates to: FNPLFLGGSGGL*PPLRANVSDAP Trigger: GGGGGCATCACTGACATTGGCTCTGAGCGGAGGCCAGAGGCCACCACTGCCTCCAAGGAACAAGGGGTTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | CCCCAGGACTTTCAACCCCTTGTTCCTTGGAGGCAGTaGTGGCCTCTGGCCTCCGCTCAGAGCCAATGTCAG | + |
Preference number: 6 (lower is better) Translates to: PQDFQPLVPWRQ*WPLASAQSQCQ Trigger: CTGACATTGGCTCTGAGCGGAGGCCAGAGGCCACCACTGCCTCCAAGGAACAAGGGGTTGAAAGTCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | CCGAGCAGCAAGGAGCGTCTGTGGCCCTTGGAGAGCTaGCTGGTTGAGCCCCAGGACTTTCAACCCCTTGTT | + |
Preference number: 6 (lower is better) Translates to: PSSKERLWPLES*LVEPQDFQPLV Trigger: AACAAGGGGTTGAAAGTCCTGGGGCTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCTCCTTGCTGCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CAA 72 bp | GTGATGCCCCCTGCAGTCAGGTCCTGTACCCTCTTGTaGAGGTCATTGCGCTCGGTCTGCAGTGCTCGGCAC | + |
Preference number: 6 (lower is better) Translates to: VMPPAVRSCTLL*RSLRSVCSARH Trigger: GTGCCGAGCACTGCAGACCGAGCGCAATGACCTCAACAAGAGGGTACAGGACCTGACTGCAGGGGGCATCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS TCA 72 bp | CAAGGAGCGTCTGTGGCCCTTGGAGAGCTGGCTGGTTaGGCCCCAGGACTTTCAACCCCTTGTTCCTTGGAG | + |
Preference number: 6 (lower is better) Translates to: QGASVALGELAG*APGLSTPCSLE Trigger: CTCCAAGGAACAAGGGGTTGAAAGTCCTGGGGCTCAACCAGCCAGCTCTCCAAGGGCCACAGACGCTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 72 bp | TACAGGGCGAGCTGCTGCTTTAGGTGGGTCTCCTGCTaGTTCATCAGCTCGCACATCCTCTGGGACTCCACC | + |
Preference number: 6 (lower is better) Translates to: YRASCCFRWVSC*FISSHILWDST Trigger: GGTGGAGTCCCAGAGGATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCTAAAGCAGCAGCTCGCCCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 72 bp | GTGTACAGGGCGAGCTGCTGCTTTAGGTGGGTCTCCTaGTGCTTCATCAGCTCGCACATCCTCTGGGACTCC | + |
Preference number: 6 (lower is better) Translates to: VYRASCCFRWVS*CFISSHILWDS Trigger: GGAGTCCCAGAGGATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCTAAAGCAGCAGCTCGCCCTGTACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | CTCTCCCTTAGAGGTCTCCTTCTCGCCGTTGACGACTaGAATGCCTGGTTCAGGCTCCCCATTCCTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: LSLRGLLLAVDD*NAWFRLPIPGC Trigger: GCAGCCAGGAATGGGGAGCCTGAACCAGGCATTCCAGTCGTCAACGGCGAGAAGGAGACCTCTAAGGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CAA 72 bp | GGTCCTGCTTCCCGTTGCCCCGGGCTGCCCTTCGAGTaGGAGTGTTTGGCAGGCCCATTCTTTTTGTCTTGG | + |
Preference number: 6 (lower is better) Translates to: GPASRCPGLPFE*ECLAGPFFLSW Trigger: CCAAGACAAAAAGAATGGGCCTGCCAAACACTCCAACTCGAAGGGCAGCCCGGGGCAACGGGAAGCAGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000130017.2 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CAA 72 bp | TCAGTGATGCCCCCTGCAGTCAGGTCCTGTACCCTCTaGTTGAGGTCATTGCGCTCGGTCTGCAGTGCTCGG | + |
Preference number: 6 (lower is better) Translates to: SVMPPAVRSCTL*LRSLRSVCSAR Trigger: CCGAGCACTGCAGACCGAGCGCAATGACCTCAACAAGAGGGTACAGGACCTGACTGCAGGGGGCATCACTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CAA 90 bp | GAGCCAATGTCAGTGATGCCCCCTGCAGTCAGGTCCTGTACCCTCTaGTTGAGGTCATTGCGCTCGGTCTGCAGTGCTCGGCACAGCTTC | + |
Preference number: 6 (lower is better) Translates to: EPMSVMPPAVRSCTL*LRSLRSVCSARHSF Trigger: GAAGCTGTGCCGAGCACTGCAGACCGAGCGCAATGACCTCAACAAGAGGGTACAGGACCTGACTGCAGGGGGCATCACTGACATTGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CAA 90 bp | ATCTCCTCTGTTCCAGGCTCTCCCTTAGAGGTCTCCTTCTCGCCGTaGACGACTGGAATGCCTGGTTCAGGCTCCCCATTCCTGGCTGCA | + |
Preference number: 6 (lower is better) Translates to: ISSVPGSPLEVSFSP*TTGMPGSGSPFLAA Trigger: TGCAGCCAGGAATGGGGAGCCTGAACCAGGCATTCCAGTCGTCAACGGCGAGAAGGAGACCTCTAAGGGAGAGCCTGGAACAGAGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CAA 72 bp | GTTCCAGGCTCTCCCTTAGAGGTCTCCTTCTCGCCGTaGACGACTGGAATGCCTGGTTCAGGCTCCCCATTC | + |
Preference number: 6 (lower is better) Translates to: VPGSPLEVSFSP*TTGMPGSGSPF Trigger: GAATGGGGAGCCTGAACCAGGCATTCCAGTCGTCAACGGCGAGAAGGAGACCTCTAAGGGAGAGCCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | CATTCAGTGTCACCTGGAAGTGTGAAGTCACTTCTTTaGGCTTCTCCTCCTCCTCACGGGCTCGCTGCACGC | + |
Preference number: 6 (lower is better) Translates to: HSVSPGSVKSLL*ASPPPHGLAAR Trigger: GCGTGCAGCGAGCCCGTGAGGAGGAGGAGAAGCGCAAAGAAGTGACTTCACACTTCCAGGTGACACTGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000133803.8 |
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CDS GCA 72 bp | TACCCTCTTGTTGAGGTCATTGCGCTCGGTCTGCAGTaGTCGGCACAGCTTCTCCAGCCGCTGGATTTTCAC | + |
Preference number: 6 (lower is better) Translates to: YPLVEVIALGLQ*SAQLLQPLDFH Trigger: GTGAAAATCCAGCGGCTGGAGAAGCTGTGCCGAGCACTGCAGACCGAGCGCAATGACCTCAACAAGAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 72 bp | TGGCCTCCGCTCAGAGCCAATGTCAGTGATGCCCCCTaGAGTCAGGTCCTGTACCCTCTTGTTGAGGTCATT | + |
Preference number: 6 (lower is better) Translates to: WPPLRANVSDAP*SQVLYPLVEVI Trigger: AATGACCTCAACAAGAGGGTACAGGACCTGACTGCAGGGGGCATCACTGACATTGGCTCTGAGCGGAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | AACTTCTCCGTGTACAGGGCGAGCTGCTGCTTTAGGTaGGTCTCCTGCTGCTTCATCAGCTCGCACATCCTC | + |
Preference number: 6 (lower is better) Translates to: NFSVYRASCCFR*VSCCFISSHIL Trigger: GAGGATGTGCGAGCTGATGAAGCAGCAGGAGACCCACCTAAAGCAGCAGCTCGCCCTGTACACGGAGAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS TCA 72 bp | GCTCCTCACGAAGCTCGTATTGCTCGATCAACTTCTTaGGCCTCTCGGCTAGCTCCATATTCTCCTGGCGCA | + |
Preference number: 6 (lower is better) Translates to: APHEARIARSTS*ASRLAPYSPGA Trigger: TGCGCCAGGAGAATATGGAGCTAGCCGAGAGGCTCAAGAAGTTGATCGAGCAATACGAGCTTCGTGAGGAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 72 bp | AGCTTCTCCTCTGGGGTACTCAGCGTGTTCAGTGTCTaGATCAGCAGAGTGATCTCCTTCCCTAGACCCTTG | + |
Preference number: 6 (lower is better) Translates to: SFSSGVLSVFSV*ISRVISFPRPL Trigger: CAAGGGTCTAGGGAAGGAGATCACTCTGCTGATGCAGACACTGAACACGCTGAGTACCCCAGAGGAGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS CAA 72 bp | TGCTCCTCACGAAGCTCGTATTGCTCGATCAACTTCTaGAGCCTCTCGGCTAGCTCCATATTCTCCTGGCGC | + |
Preference number: 6 (lower is better) Translates to: CSSRSSYCSINF*SLSASSIFSWR Trigger: GCGCCAGGAGAATATGGAGCTAGCCGAGAGGCTCAAGAAGTTGATCGAGCAATACGAGCTTCGTGAGGAGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CAA 90 bp | TTGTCCCGGACGGTTTTCTCTTCAGCCATCTCCAGCAGAGCCTTGTaGCTGCTTTCCCACCGGGATCGATACATGGTGGTTTCTTTCTCC | + |
Preference number: 6 (lower is better) Translates to: LSRTVFSSAISSRAL*LLSHRDRYMVVSFS Trigger: GGAGAAAGAAACCACCATGTATCGATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGAGATGGCTGAAGAGAAAACCGTCCGGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CCA 72 bp | AACTTCTTGAGCCTCTCGGCTAGCTCCATATTCTCCTaGCGCAGCTTGGAGTTTCGCTCGTTATGCTGTTCC | + |
Preference number: 6 (lower is better) Translates to: NFLSLSASSIFS*RSLEFRSLCCS Trigger: GGAACAGCATAACGAGCGAAACTCCAAGCTGCGCCAGGAGAATATGGAGCTAGCCGAGAGGCTCAAGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS CAA 90 bp | TCTTTGTCCCGGACGGTTTTCTCTTCAGCCATCTCCAGCAGAGCCTaGTTGCTGCTTTCCCACCGGGATCGATACATGGTGGTTTCTTTC | + |
Preference number: 6 (lower is better) Translates to: SLSRTVFSSAISSRA*LLLSHRDRYMVVSF Trigger: GAAAGAAACCACCATGTATCGATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGAGATGGCTGAAGAGAAAACCGTCCGGGACAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS TCA 72 bp | GGGTACTCAGCGTGTTCAGTGTCTGCATCAGCAGAGTaGTCTCCTTCCCTAGACCCTTGGCTTTCTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: GYSACSVSASAE*SPSLDPWLSSS Trigger: AGAAGAAGAAAGCCAAGGGTCTAGGGAAGGAGATCACTCTGCTGATGCAGACACTGAACACGCTGAGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | TTCTGCAGGAGCTTCATCTGCTTCTGCGAGTTCCGATaGTCTTCCAGCAGCTCAGCATACTTCTTGCACAGT | + |
Preference number: 6 (lower is better) Translates to: FCRSFICFCEFR*SSSSSAYFLHS Trigger: ACTGTGCAAGAAGTATGCTGAGCTGCTGGAAGAGCATCGGAACTCGCAGAAGCAGATGAAGCTCCTGCAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 ENSMUST00000132217.8 ENSMUST00000133803.8 ENSMUST00000154105.8 |
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CDS GCA 72 bp | AAGACTTTGTCGATATGCTCCTCACGAAGCTCGTATTaGTCGATCAACTTCTTGAGCCTCTCGGCTAGCTCC | + |
Preference number: 6 (lower is better) Translates to: KTLSICSSRSSY*SINFLSLSASS Trigger: GGAGCTAGCCGAGAGGCTCAAGAAGTTGATCGAGCAATACGAGCTTCGTGAGGAGCATATCGACAAAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS GCA 72 bp | TTTTCTCTTCAGCCATCTCCAGCAGAGCCTTGTTGCTaGTTTCCCACCGGGATCGATACATGGTGGTTTCTT | + |
Preference number: 6 (lower is better) Translates to: FSLQPSPAEPCC*FPTGIDTWWFL Trigger: AAGAAACCACCATGTATCGATCCCGGTGGGAAAGCAGCAACAAGGCTCTGCTGGAGATGGCTGAAGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |
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CDS TCA 72 bp | TTGGAGTTTCGCTCGTTATGCTGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACCTGGAAGTGTGAAGTC | + |
Preference number: 6 (lower is better) Translates to: LEFRSLCCSICS*MSFSVTWKCEV Trigger: GACTTCACACTTCCAGGTGACACTGAATGACATTCAGCTGCAGATGGAACAGCATAACGAGCGAAACTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046425.16 ENSMUST00000084264.12 |