Pregenerated sensors for TWSG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024098Ensembl transcript IDs: ENSMUST00000024906.6, ENSMUST00000233580.2, ENSMUST00000233663.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCACGTGCTTCCCACACGTGCTGGAGACCCTGCTGTTCTGCTGGTaGGGAGTCAGACCCTCTCCTGGTCAGCCGCACACCCAGCTATGC | + |
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Preference number: 1 (lower is better) Translates to: PTCFPHVLETLLFCW*GVRPSPGQPHTQLC Trigger: GCATAGCTGGGTGTGCGGCTGACCAGGAGAGGGTCTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CCA 90 bp | GCTGGAGACCCTGCTGTTCTGCTGGTGCGGAGTCAGACCCTCTCCTaGTCAGCCGCACACCCAGCTATGCTGTGCACCTGCTGCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: AGDPAVLLVRSQTLS*SAAHPAMLCTCCSA Trigger: TGCAGAGCAGCAGGTGCACAGCATAGCTGGGTGTGCGGCTGACCAGGAGAGGGTCTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CCA 90 bp | TGTGCATCCTTCCTCAACCCTCTCCCACGTGCTTCCCACACGTGCTaGAGACCCTGCTGTTCTGCTGGTGCGGAGTCAGACCCTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: CASFLNPLPRASHTC*RPCCSAGAESDPLL Trigger: CAGGAGAGGGTCTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGGAGAGGGTTGAGGAAGGATGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR GCA 90 bp | ATCTGTGCATCCTTCCTCAACCCTCTCCCACGTGCTTCCCACACGTaGTGGAGACCCTGCTGTTCTGCTGGTGCGGAGTCAGACCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: ICASFLNPLPRASHT*WRPCCSAGAESDPL Trigger: GAGAGGGTCTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGGAGAGGGTTGAGGAAGGATGCACAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR GCA 90 bp | CTTCTCTGTCCACATCTGTGCATCCTTCCTCAACCCTCTCCCACGTaGTTCCCACACGTGCTGGAGACCCTGCTGTTCTGCTGGTGCGGA | + |
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Preference number: 1 (lower is better) Translates to: LLCPHLCILPQPSPT*FPHVLETLLFCWCG Trigger: TCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGGAGAGGGTTGAGGAAGGATGCACAGATGTGGACAGAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR TCA 90 bp | CACAGGACTTGTGCTTTCTGGGCAGTGCCTTGCTCTGGCTGGCCTTaGTCCTCTGATCATCTTGCTCAGCCTCTCTGTGGTGGGAGCGCA | + |
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Preference number: 1 (lower is better) Translates to: HRTCAFWAVPCSGWP*SSDHLAQPLCGGSA Trigger: TGCGCTCCCACCACAGAGAGGCTGAGCAAGATGATCAGAGGATCAAGGCCAGCCAGAGCAAGGCACTGCCCAGAAAGCACAAGTCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CCA 90 bp | ATGATACTGTGCCTGTCTGGAGGTCAGAGGACAACTCCCAGCAGCTaGTCCTGTCCTTCCACTGTACGGGCTCTGGGGATGGAACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: MILCLSGGQRTTPSS*SCPSTVRALGMELR Trigger: CCTGAGTTCCATCCCCAGAGCCCGTACAGTGGAAGGACAGGACCAGCTGCTGGGAGTTGTCCTCTGACCTCCAGACAGGCACAGTATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CCA 90 bp | TGCCCAACTGCATCCTGGGACGCTGACAGAGCCTTGATCCTGCTTTaGCAAGTGGTGTTGCTACGTGTTGGGCTTCAAGGCCTGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: CPTASWDADRALILL*QVVLLRVGLQGLDG Trigger: ACCATCCAGGCCTTGAAGCCCAACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGCGTCCCAGGATGCAGTTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR GCA 90 bp | ACGCTACGCAAAACGCTGAGCACAGGACTTGTGCTTTCTGGGCAGTaGCTTGCTCTGGCTGGCCTTGATCCTCTGATCATCTTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: TLRKTLSTGLVLSGQ*LALAGLDPLIILLS Trigger: GCTGAGCAAGATGATCAGAGGATCAAGGCCAGCCAGAGCAAGGCACTGCCCAGAAAGCACAAGTCCTGTGCTCAGCGTTTTGCGTAGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR GCA 90 bp | CAAAAGCCCACAGCAGGCCAAGCCTCCAACACCATCTGCTGCTGTTaGGAGGTACTCTCACGAGAGACCACCCCTTGGATACTCCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: QKPTAGQASNTICCC*EVLSRETTPWILLK Trigger: CTTTAGGAGTATCCAAGGGGTGGTCTCTCGTGAGAGTACCTCGCAACAGCAGCAGATGGTGTTGGAGGCTTGGCCTGCTGTGGGCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CCA 90 bp | GGATTAGGAGGTGTGGTGTTATTGGAGGAGGCGTGTCACTGGGGGTaGACTTTAAGGTTTCAAAAGCCCACAGCAGGCCAAGCCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: GLGGVVLLEEACHWG*TLRFQKPTAGQASN Trigger: GTTGGAGGCTTGGCCTGCTGTGGGCTTTTGAAACCTTAAAGTCCACCCCCAGTGACACGCCTCCTCCAATAACACCACACCTCCTAATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR TCA 90 bp | ACTCAAGAACTTGCCCAACTGCATCCTGGGACGCTGACAGAGCCTTaGTCCTGCTTTGGCAAGTGGTGTTGCTACGTGTTGGGCTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: TQELAQLHPGTLTEP*SCFGKWCCYVLGFK Trigger: CTTGAAGCCCAACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGCGTCCCAGGATGCAGTTGGGCAAGTTCTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR GCA 90 bp | TTAAGGTTTCAAAAGCCCACAGCAGGCCAAGCCTCCAACACCATCTaGTGCTGTTGCGAGGTACTCTCACGAGAGACCACCCCTTGGATA | + |
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Preference number: 1 (lower is better) Translates to: LRFQKPTAGQASNTI*CCCEVLSRETTPWI Trigger: TATCCAAGGGGTGGTCTCTCGTGAGAGTACCTCGCAACAGCAGCAGATGGTGTTGGAGGCTTGGCCTGCTGTGGGCTTTTGAAACCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR TCA 90 bp | TGCCATGACACTCTTGGTAGACAAAACTCTTCTATACCAGAGCAGTaGCGACTCTGTGTCTCACCACACCAGCACTACAGGCGGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: CHDTLGRQNSSIPEQ*RLCVSPHQHYRRTG Trigger: CCCTGTCCGCCTGTAGTGCTGGTGTGGTGAGACACAGAGTCGTCACTGCTCTGGTATAGAAGAGTTTTGTCTACCAAGAGTGTCATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR GCA 90 bp | CTACTAGGAGTTCCCGACATTTTTATGCTTCTCTGTCCACATCTGTaGATCCTTCCTCAACCCTCTCCCACGTGCTTCCCACACGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LLGVPDIFMLLCPHL*ILPQPSPTCFPHVL Trigger: CAGCACGTGTGGGAAGCACGTGGGAGAGGGTTGAGGAAGGATGCACAGATGTGGACAGAGAAGCATAAAAATGTCGGGAACTCCTAGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CCA 90 bp | CAAAAGCAGAAAGGTGACGCAGAAAGGTTTCACCCTTGTACAAGCTaGTCCAGTGGACTCTGTGGGGACATCCTGCAAGGTAGGAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: QKQKGDAERFHPCTS*SSGLCGDILQGRSV Trigger: GACACTCCTACCTTGCAGGATGTCCCCACAGAGTCCACTGGACCAGCTTGTACAAGGGTGAAACCTTTCTGCGTCACCTTTCTGCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR TCA 90 bp | CACACCCCTTTCCTCTTTCCAGCCCTATCAGGACTGGTCAGTCTTTaGCAGTGCAATACAACATCAGCACCCACAAATGTGCTAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: HTPFLFPALSGLVSL*QCNTTSAPTNVLGH Trigger: GTGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCACTGTCAAAGACTGACCAGTCCTGATAGGGCTGGAAAGAGGAAAGGGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CCA 90 bp | GGTCCTTCAAAACGCCTCCTGATTTCAAGAACACCCACAGCCCTGTaGGAGCTAAGAAGGAAGGGGCTGAAATGTTTCCAAGGCACCTTT | + |
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Preference number: 1 (lower is better) Translates to: GPSKRLLISRTPTAL*ELRRKGLKCFQGTF Trigger: AAAGGTGCCTTGGAAACATTTCAGCCCCTTCCTTCTTAGCTCCCACAGGGCTGTGGGTGTTCTTGAAATCAGGAGGCGTTTTGAAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR TCA 90 bp | GTGGGAGCTAAGAAGGAAGGGGCTGAAATGTTTCCAAGGCACCTTTaGACAGAGGCACTCTGGGTAGAAGTGAGAGGACACCTTAATGTA | + |
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Preference number: 1 (lower is better) Translates to: VGAKKEGAEMFPRHL*TEALWVEVRGHLNV Trigger: TACATTAAGGTGTCCTCTCACTTCTACCCAGAGTGCCTCTGTTCAAAGGTGCCTTGGAAACATTTCAGCCCCTTCCTTCTTAGCTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR GCA 90 bp | GTCTGTCTGCTAAATCACGCTGTAAGGCAGCTGCTGTCATGGCTCTaGAAAAGCAGAAAGGTGACGCAGAAAGGTTTCACCCTTGTACAA | + |
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Preference number: 1 (lower is better) Translates to: VCLLNHAVRQLLSWL*KSRKVTQKGFTLVQ Trigger: TTGTACAAGGGTGAAACCTTTCTGCGTCACCTTTCTGCTTTTGCAGAGCCATGACAGCAGCTGCCTTACAGCGTGATTTAGCAGACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CCA 90 bp | CACATGTACCAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTTaGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: HMYQACAITFKTRSV*KAGRRRHLLSACQV Trigger: AACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGTACATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
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| 3UTR CCA 90 bp | ACCATCTGCTGCTGTTGCGAGGTACTCTCACGAGAGACCACCCCTTaGATACTCCTAAAGCCAAATAGAAAGTCTTTACTGTTAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: TICCCCEVLSRETTP*ILLKPNRKSLLLAC Trigger: ACAGGCTAACAGTAAAGACTTTCTATTTGGCTTTAGGAGTATCCAAGGGGTGGTCTCTCGTGAGAGTACCTCGCAACAGCAGCAGATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR GCA 90 bp | GTGTTCTACAACTGGCAGGTGAGAACCACACATGTACCAGGCTTGTaGTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: VFYNWQVRTTHVPGL*YHVQNEKCLESWKK Trigger: CTTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTAGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
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| 3UTR TCA 90 bp | AGCGTCTTTGGATCCGGCTGTAAGAAAAACAAGATCATTTTTCACTaGGGAAGAACCGTAAACTCTTACAAAGGCTTTAGTACGGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SVFGSGCKKNKIIFH*GRTVNSYKGFSTGE Trigger: TTCTCCCGTACTAAAGCCTTTGTAAGAGTTTACGGTTCTTCCTCAGTGAAAAATGATCTTGTTTTTCTTACAGCCGGATCCAAAGACGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CCA 90 bp | TATGCTAATGACAATGTTATTTTTCTAAACTTTACAGTTAAACTTTaGTGTGAGGACCCCTTTCACAACACGCTGTGTGAACAGTACATT | + |
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Preference number: 1 (lower is better) Translates to: YANDNVIFLNFTVKL*CEDPFHNTLCEQYI Trigger: AATGTACTGTTCACACAGCGTGTTGTGAAAGGGGTCCTCACACCAAAGTTTAACTGTAAAGTTTAGAAAAATAACATTGTCATTAGCATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CAA 90 bp | TCAAAAGCCCACAGCAGGCCAAGCCTCCAACACCATCTGCTGCTGTaGCGAGGTACTCTCACGAGAGACCACCCCTTGGATACTCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SKAHSRPSLQHHLLL*RGTLTRDHPLDTPK Trigger: TTTAGGAGTATCCAAGGGGTGGTCTCTCGTGAGAGTACCTCGCAACAGCAGCAGATGGTGTTGGAGGCTTGGCCTGCTGTGGGCTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CAA 90 bp | CACTCAAGAACTTGCCCAACTGCATCCTGGGACGCTGACAGAGCCTaGATCCTGCTTTGGCAAGTGGTGTTGCTACGTGTTGGGCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: HSRTCPTASWDADRA*ILLWQVVLLRVGLQ Trigger: TTGAAGCCCAACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGCGTCCCAGGATGCAGTTGGGCAAGTTCTTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGAACCAACATTCAGCTACTGCTCCAGCACCATGCCTGCTACCTACTGCCTCTACAAGCTGGTCCAGTaGACTCTGTGGGGACATCCT | + |
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Preference number: 2 (lower is better) Translates to: CEPTFSYCSSTMPATYCLYKLVQ*TLWGHP Trigger: AGGATGTCCCCACAGAGTCCACTGGACCAGCTTGTA...GAGGCAGTAGGTAGCAGGCATGGTGCTGGAGCAGTAGCTGAATGTTGGTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAATACAACATCAGCACCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGGCAAAAGCAGAAAGGTaGCGCAGAAAGGTTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: CNTTSAPTNVLGHPDGCLAKAER*RRKVSP Trigger: GGGTGAAACCTTTCTGCGTCACCTTTCTGCTTTTGC...CAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CAA 90 bp | CCACACCCCTTTCCTCTTTCCAGCCCTATCAGGACTGGTCAGTCTTaGACAGTGCAATACAACATCAGCACCCACAAATGTGCTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PHPFPLSSPIRTGQS*TVQYNISTHKCARP Trigger: TGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCACTGTCAAAGACTGACCAGTCCTGATAGGGCTGGAAAGAGGAAAGGGGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR-3UTR CCA 90 bp | TACATTCCAGGCCAGCCAGGGCTGCACAGAGATCCTGTCTCAAAACCAAACCAAAATCAGCGGCTGAAATaGAGCAGCTGTGGTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: YIPGQPGLHRDPVSKPNQNQRLK*SSCGPS Trigger: TGAAGGACCACAGCTGCTCCATTTCAGCCGCTGATT...TTGGTTTGGTTTTGAGACAGGATCTCTGTGCAGCCCTGGCTGGCCTGGAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR-3UTR CCA 90 bp | TACATGTGGTGGTTTGAACGAGAATGGCCTTTGTGGGCTCGTATATCTGAATGCTGCCCAACTGCATCCTaGGACGCTGACAGAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: YMWWFEREWPLWARISECCPTAS*DADRAL Trigger: CAAGGCTCTGTCAGCGTCCCAGGATGCAGTTGGGCA...GCATTCAGATATACGAGCCCACAAAGGCCATTCTCGTTCAAACCACCACATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTACTGTTAGCCTGTGGCTGCAAGGGAACTTGCCCAATCTATGCAGACCAGCTGCTGTCATGGCTCTaGAAAAGCAGAAAGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: SLLLACGCKGTCPIYADQLLSWL*KSRKVT Trigger: CGTCACCTTTCTGCTTTTGCAGAGCCATGACAGCAG...CTGGTCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAGTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGACTTGTGCTTTCTGGGCAGTGCCTTGCTCTGGCTGGCCTTGATCCTCTGAAACCTGTCAGGGAATaGCTGCTATTTCTTCATAAG | + |
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Preference number: 2 (lower is better) Translates to: TGLVLSGQCLALAGLDPLKPVRE*LLFLHK Trigger: CTTATGAAGAAATAGCAGCCATTCCCTGACAGGTTT...CAGAGGATCAAGGCCAGCCAGAGCAAGGCACTGCCCAGAAAGCACAAGTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGTTTCACCCTTGTACAAGCTGGTCCAGTGGACTCTGTGGGGACATCCTTCAGCGTTCTTGCTTTaGTTTGCATTTCTTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RKVSPLYKLVQWTLWGHPSAFLL*FAFLPP Trigger: AGGGGGAAGAAATGCAAACCAAAGCAAGAACGCTGA...AGGATGTCCCCACAGAGTCCACTGGACCAGCTTGTACAAGGGTGAAACCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CAA 90 bp | ACACATGTACCAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTaGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: THVPGLCYHVQNEKC*ESWKKTAPSVSMSG Trigger: ACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGTACATGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTACTGTTAGCCTGTGGCTGCAAGGGAACTTGCCCAATCTATGCAGACCAAAGCTGCCTTGGTTGTaGTGTCTCTTCACAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: VFTVSLWLQGNLPNLCRPKLPWL*CLFTAI Trigger: TATTGCTGTGAAGAGACACCACAACCAAGGCAGCTT...TGGTCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAGTAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CAA 90 bp | CTAGTGTTCTACAACTGGCAGGTGAGAACCACACATGTACCAGGCTaGTGCTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LVFYNWQVRTTHVPG*CYHVQNEKCLESWK Trigger: CTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTAGAACACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
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| 3UTR CAA 90 bp | GCTTTTACCTGGCTACTTCCTGACCCAGGTCATCCTCAAGTGCATTaGATGAAGTTCCAAAGGTATGCCATGACACTCTTGGTAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: AFTWLLPDPGHPQVH*MKFQRYAMTLLVDK Trigger: TTTGTCTACCAAGAGTGTCATGGCATACCTTTGGAACTTCATCAAATGCACTTGAGGATGACCTGGGTCAGGAAGTAGCCAGGTAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAACAGACCTTTAAATCATAGCCCATCTTCAGCATCTCATTCTCCAGAGTTTTGCTCTGGCTGGCCTTaGTCCTCTGATCATCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: QNRPLNHSPSSASHSPEFCSGWP*SSDHLA Trigger: AGCAAGATGATCAGAGGATCAAGGCCAGCCAGAGCA...AAACTCTGGAGAATGAGATGCTGAAGATGGGCTATGATTTAAAGGTCTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR-3UTR TCA 90 bp | TACATGTGGTGGTTTGAACGAGAATGGCCTTTGTGGGCTCGTATATCTGAATGCGGACTGGTCAGTCTTTaGCAGTGCAATACAACATCA | + |
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Preference number: 2 (lower is better) Translates to: YMWWFEREWPLWARISECGLVSL*QCNTTS Trigger: TGATGTTGTATTGCACTGTCAAAGACTGACCAGTCC...GCATTCAGATATACGAGCCCACAAAGGCCATTCTCGTTCAAACCACCACATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTCTACAACTGGCAGGTGAGAACCACACATGTACCAGGCTTGTGCTATCAAAGACCTACATGCTTTaGTTTGCATTTCTTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SVLQLAGENHTCTRLVLSKTYML*FAFLPP Trigger: AGGGGGAAGAAATGCAAACCAAAGCATGTAGGTCTT...TGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTAGAACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233663.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTGGATACTCCTAAAGCCAAATAGAAAGTCTTTACTGTTAGCCTGTGGCTGCGCTTTCTTCATAAGCTaGCTTGGTTGTGGTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PWILLKPNRKSLLLACGCAFFIS*LGCGVS Trigger: AGAGACACCACAACCAAGGCAGCTTATGAAGAAAGC...GCAGCCACAGGCTAACAGTAAAGACTTTCTATTTGGCTTTAGGAGTATCCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAGGAGTTCCCGACATTTTTATGCTTCTCTGTCCACATCTGTGCATCCTTCCCACTTCATGACTTACTaGTTTGGTTTGCATTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TRSSRHFYASLSTSVHPSHFMTY*FGLHFF Trigger: GAAGAAATGCAAACCAAAGCAGTAAGTCATGAAGTG...GGAAGGATGCACAGATGTGGACAGAGAAGCATAAAAATGTCGGGAACTCCTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCGCTGGCCCTAGGCAAAACTCTTCTGTTGTAAAATATAGTAAATATTTACATGACTTACTGCTTTaGTTTGCATTTCTTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: QLAGPRQNSSVVKYSKYLHDLLL*FAFLPP Trigger: AGGGGGAAGAAATGCAAACCAAAGCAGTAAGTCATG...TAAATATTTACTATATTTTACAACAGAAGAGTTTTGCCTAGGGCCAGCGAGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR-3UTR GCA 90 bp | AAATATTACATTTCAATTAGGAATAAAACGCTACGCAAAACGCTGAGCACAGGATTCCCGACATTTTTATaGTTCTCTGTCCACATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KYYISIRNKTLRKTLSTGFPTFL*FSVHIC Trigger: ACAGATGTGGACAGAGAAGCATAAAAATGTCGGGAA...TCCTGTGCTCAGCGTTTTGCGTAGCGTTTTATTCCTAATTGAAATGTAATATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | TTCCCACACGTGCTGGAGACCCTGCTGTTCTGCTGGTaGGGAGTCAGACCCTCTCCTGGTCAGCCGCACACC | + |
|
Preference number: 3 (lower is better) Translates to: FPHVLETLLFCW*GVRPSPGQPHT Trigger: GGTGTGCGGCTGACCAGGAGAGGGTCTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | TGCTTCCCACACGTGCTGGAGACCCTGCTGTTCTGCTaGTGCGGAGTCAGACCCTCTCCTGGTCAGCCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CFPHVLETLLFC*CGVRPSPGQPH Trigger: GTGCGGCTGACCAGGAGAGGGTCTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | TTTGTCTCTTGCTGGTGCTCACGGTGGAACGAGGGCTaGACCATGACAGGTGAGCGCCCCGTCACCGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FVSCWCSRWNEG*TMTGERPVTGL Trigger: AAGCCCGGTGACGGGGCGCTCACCTGTCATGGTGCAGCCCTCGTTCCACCGTGAGCACCAGCAAGAGACAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | TCCTTCCTCAACCCTCTCCCACGTGCTTCCCACACGTaGTGGAGACCCTGCTGTTCTGCTGGTGCGGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFLNPLPRASHT*WRPCCSAGAES Trigger: TGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGGAGAGGGTTGAGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | TGCCTGTCTGGAGGTCAGAGGACAACTCCCAGCAGCTaGTCCTGTCCTTCCACTGTACGGGCTCTGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CLSGGQRTTPSS*SCPSTVRALGM Trigger: CATCCCCAGAGCCCGTACAGTGGAAGGACAGGACCAGCTGCTGGGAGTTGTCCTCTGACCTCCAGACAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | TTCCTCAACCCTCTCCCACGTGCTTCCCACACGTGCTaGAGACCCTGCTGTTCTGCTGGTGCGGAGTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FLNPLPRASHTC*RPCCSAGAESD Trigger: GTCTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGGAGAGGGTTGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | TGGTCAGCCGCACACCCAGCTATGCTGTGCACCTGCTaGTCTGCACGGAGTCTAATGGAGCATCGCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: WSAAHPAMLCTC*SARSLMEHRLQ Trigger: CTGTAGGCGATGCTCCATTAGACTCCGTGCAGAGCAGCAGGTGCACAGCATAGCTGGGTGTGCGGCTGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | CCACATCTGTGCATCCTTCCTCAACCCTCTCCCACGTaGTTCCCACACGTGCTGGAGACCCTGCTGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PHLCILPQPSPT*FPHVLETLLFC Trigger: GCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGGAGAGGGTTGAGGAAGGATGCACAGATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | CACAAGCTTGTGTTTGTCTCTTGCTGGTGCTCACGGTaGAACGAGGGCTGCACCATGACAGGTGAGCGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: HKLVFVSCWCSR*NEGCTMTGERP Trigger: GGGGCGCTCACCTGTCATGGTGCAGCCCTCGTTCCACCGTGAGCACCAGCAAGAGACAAACACAAGCTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | CAAAAGCCCACAGCAGGCCAAGCCTCCAACACCATCTaGTGCTGTTGCGAGGTACTCTCACGAGAGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: QKPTAGQASNTI*CCCEVLSRETT Trigger: GGTGGTCTCTCGTGAGAGTACCTCGCAACAGCAGCAGATGGTGTTGGAGGCTTGGCCTGCTGTGGGCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR GCA 72 bp | GTACAAGCTGGTCCAGTGGACTCTGTGGGGACATCCTaGAAGGTAGGAGTGTCAACGGCATCGTCAGCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VQAGPVDSVGTS*KVGVSTASSAF Trigger: GAACGCTGACGATGCCGTTGACACTCCTACCTTGCAGGATGTCCCCACAGAGTCCACTGGACCAGCTTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR CCA 72 bp | CGGCCTCTGACTCACAAGCTTGTGTTTGTCTCTTGCTaGTGCTCACGGTGGAACGAGGGCTGCACCATGACA | + |
|
Preference number: 3 (lower is better) Translates to: RPLTHKLVFVSC*CSRWNEGCTMT Trigger: TGTCATGGTGCAGCCCTCGTTCCACCGTGAGCACCAGCAAGAGACAAACACAAGCTTGTGAGTCAGAGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | GCATCCTGGGACGCTGACAGAGCCTTGATCCTGCTTTaGCAAGTGGTGTTGCTACGTGTTGGGCTTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASWDADRALILL*QVVLLRVGLQG Trigger: GCCTTGAAGCCCAACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGCGTCCCAGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR TCA 72 bp | CTTGCCCAACTGCATCCTGGGACGCTGACAGAGCCTTaGTCCTGCTTTGGCAAGTGGTGTTGCTACGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LAQLHPGTLTEP*SCFGKWCCYVL Trigger: CAACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGCGTCCCAGGATGCAGTTGGGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR GCA 72 bp | AAAACGCTGAGCACAGGACTTGTGCTTTCTGGGCAGTaGCTTGCTCTGGCTGGCCTTGATCCTCTGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: KTLSTGLVLSGQ*LALAGLDPLII Trigger: GATGATCAGAGGATCAAGGCCAGCCAGAGCAAGGCACTGCCCAGAAAGCACAAGTCCTGTGCTCAGCGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR TCA 72 bp | AGGTTATCAGGCTTGGTAGCAAGCGCCTTTATCCACTaGGTCAGCTCGCTGGCCCTAGGCAAAACTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLSGLVASAFIH*VSSLALGKTLL Trigger: CAGAAGAGTTTTGCCTAGGGCCAGCGAGCTGACTCAGTGGATAAAGGCGCTTGCTACCAAGCCTGATAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR TCA 72 bp | GGCAGCTGCTGTCATGGCTCTGCAAAAGCAGAAAGGTaGCGCAGAAAGGTTTCACCCTTGTACAAGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSCCHGSAKAER*RRKVSPLYKLV Trigger: GACCAGCTTGTACAAGGGTGAAACCTTTCTGCGTCACCTTTCTGCTTTTGCAGAGCCATGACAGCAGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR TCA 72 bp | TCACTCAAGAACTTGCCCAACTGCATCCTGGGACGCTaGCAGAGCCTTGATCCTGCTTTGGCAAGTGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLKNLPNCILGR*QSLDPALASGV Trigger: AACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGCGTCCCAGGATGCAGTTGGGCAAGTTCTTGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR GCA 72 bp | CTCTGTGGTGGGAGCGCAAACCTGTCAGGGAATGGCTaGTATTTCTTCATAAGCCTTGGCGAGCCAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCGGSANLSGNG*YFFISLGEPGK Trigger: TTTTCCTGGCTCGCCAAGGCTTATGAAGAAATAGCAGCCATTCCCTGACAGGTTTGCGCTCCCACCACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | AAAGGTGACGCAGAAAGGTTTCACCCTTGTACAAGCTaGTCCAGTGGACTCTGTGGGGACATCCTGCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KGDAERFHPCTS*SSGLCGDILQG Trigger: ACCTTGCAGGATGTCCCCACAGAGTCCACTGGACCAGCTTGTACAAGGGTGAAACCTTTCTGCGTCACCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGTGCTGCTACGGGAGAGCTAAGAAAGTCACCTTCCCACACCCCTTTCCTCAGGACTGGTCAGTCTTaGACAGTGCAATACAACATC | + |
|
Preference number: 3 (lower is better) Translates to: QCAATGELRKSPSHTPFLRTGQS*TVQYNI Trigger: GATGTTGTATTGCACTGTCAAAGACTGACCAGTCCT...GAGGAAAGGGGTGTGGGAAGGTGACTTTCTTAGCTCTCCCGTAGCAGCACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR GCA 72 bp | GTTCCCGACATTTTTATGCTTCTCTGTCCACATCTGTaGATCCTTCCTCAACCCTCTCCCACGTGCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VPDIFMLLCPHL*ILPQPSPTCFP Trigger: TGGGAAGCACGTGGGAGAGGGTTGAGGAAGGATGCACAGATGTGGACAGAGAAGCATAAAAATGTCGGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR TCA 72 bp | AAGAAGGAAGGGGCTGAAATGTTTCCAAGGCACCTTTaGACAGAGGCACTCTGGGTAGAAGTGAGAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: KKEGAEMFPRHL*TEALWVEVRGH Trigger: GTGTCCTCTCACTTCTACCCAGAGTGCCTCTGTTCAAAGGTGCCTTGGAAACATTTCAGCCCCTTCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | CTAAATCACGCTGTAAGGCAGCTGCTGTCATGGCTCTaGAAAAGCAGAAAGGTGACGCAGAAAGGTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LNHAVRQLLSWL*KSRKVTQKGFT Trigger: GGTGAAACCTTTCTGCGTCACCTTTCTGCTTTTGCAGAGCCATGACAGCAGCTGCCTTACAGCGTGATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR CCA 72 bp | AAACGCCTCCTGATTTCAAGAACACCCACAGCCCTGTaGGAGCTAAGAAGGAAGGGGCTGAAATGTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KRLLISRTPTAL*ELRRKGLKCFQ Trigger: TTGGAAACATTTCAGCCCCTTCCTTCTTAGCTCCCACAGGGCTGTGGGTGTTCTTGAAATCAGGAGGCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | TGTCTGCTAAATCACGCTGTAAGGCAGCTGCTGTCATaGCTCTGCAAAAGCAGAAAGGTGACGCAGAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CLLNHAVRQLLS*LCKSRKVTQKG Trigger: ACCTTTCTGCGTCACCTTTCTGCTTTTGCAGAGCCATGACAGCAGCTGCCTTACAGCGTGATTTAGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGTGGTTTGAACGAGAATGGCCTTTGTGGGCTCGTATATCTGAATGCTTGGGTCAGCGTTCTTGCTTaGGTTTGCATTTCTTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CGGLNENGLCGLVYLNAWVSVLA*VCISSP Trigger: GGGGGAAGAAATGCAAACCAAAGCAAGAACGCTGAC...CCAAGCATTCAGATATACGAGCCCACAAAGGCCATTCTCGTTCAAACCACCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGTGGTTTGAACGAGAATGGCCTTTGTGGGCTCGTATATCTGAATGCTTGGCTTTGGCAAGTGGTGTaGCTACGTGTTGGGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CGGLNENGLCGLVYLNAWLWQVV*LRVGLQ Trigger: TTGAAGCCCAACACGTAGCAACACCACTTGCCAAAG...CCAAGCATTCAGATATACGAGCCCACAAAGGCCATTCTCGTTCAAACCACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR TCA 72 bp | CTTCTGTCAGCATGTCAGGTTTTCCCAGGACTCCTCTaGACTCCCGATCCTCATGTGACTAAAGTTCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSACQVFPGLL*TPDPHVTKVPL Trigger: CAATGGAACTTTAGTCACATGAGGATCGGGAGTTCAGAGGAGTCCTGGGAAAACCTGACATGCTGACAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| 3UTR TCA 72 bp | ACTCTTGGTAGACAAAACTCTTCTATACCAGAGCAGTaGCGACTCTGTGTCTCACCACACCAGCACTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TLGRQNSSIPEQ*RLCVSPHQHYR Trigger: CCTGTAGTGCTGGTGTGGTGAGACACAGAGTCGTCACTGCTCTGGTATAGAAGAGTTTTGTCTACCAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | AAGCCAAATAGAAAGTCTTTACTGTTAGCCTGTGGCTaGAAGGGAACTTGCCCAATCTATGCAGACCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KPNRKSLLLACG*KGTCPIYADQA Trigger: GGCCTGGTCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAGTAAAGACTTTCTATTTGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR CCA 72 bp | CAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTTaGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QACAITFKTRSV*KAGRRRHLLSA Trigger: TGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACAGACCTTTAAATCATAGCCCATCTTCAGCATCTCATTCTCCAGAGTTTTTTCTGGGCAGTGCCTaGCTCTGGCTGGCCTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: QNRPLNHSPSSASHSPEFFLGSA*LWLALI Trigger: GATCAAGGCCAGCCAGAGCAAGGCACTGCCCAGAAA...AAACTCTGGAGAATGAGATGCTGAAGATGGGCTATGATTTAAAGGTCTGTTCTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGTAAAGACCTACATGCTTaGGTTTGCATTTCTTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: EKCLESWKKTAPSVSMSGKDLHA*VCISSP Trigger: GGGGGAAGAAATGCAAACCAAAGCATGTAGGTCTTT...ACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233663.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTCTTTACTGTTAGCCTGTGGCTGCAAGGGAACTTGCCCAATCTATGCAGAAGAAAGGTTTCACCCTaGTACAAGCTGGTCCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KVFTVSLWLQGNLPNLCRRKVSP*YKLVQW Trigger: CCACTGGACCAGCTTGTACAAGGGTGAAACCTTTCT...TCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAGTAAAGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGGATACTCCTAAAGCCAAATAGAAAGTCTTTACTGTTAGCCTGTGGCTGCCATAAGCTGCCTTGGTaGTGGTGTCTCTTCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PWILLKPNRKSLLLACGCHKLPW*WCLFTA Trigger: TGCTGTGAAGAGACACCACAACCAAGGCAGCTTATG...GCAGCCACAGGCTAACAGTAAAGACTTTCTATTTGGCTTTAGGAGTATCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR TCA 72 bp | TTCCTCTTTCCAGCCCTATCAGGACTGGTCAGTCTTTaGCAGTGCAATACAACATCAGCACCCACAAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: FLFPALSGLVSL*QCNTTSAPTNV Trigger: CACATTTGTGGGTGCTGATGTTGTATTGCACTGTCAAAGACTGACCAGTCCTGATAGGGCTGGAAAGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR TCA 72 bp | CGGACAGGGGACATAACATCCAAACCACTGTCAGTGTaGGAGCTACACGACAGATTTAGATTTCACCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: RTGDITSKPLSV*ELHDRFRFHHV Trigger: TACATGGTGAAATCTAAATCTGTCGTGTAGCTCTCACACTGACAGTGGTTTGGATGTTATGTCCCCTGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR TCA 72 bp | CCTAGCATACCAGAACCAAGATTTCTGCACACTTCATaGCTTACTGCTTTGGTTTGCATTTCTTCCCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSIPEPRFLHTS*LTALVCISSPS Trigger: AGAGGGGGAAGAAATGCAAACCAAAGCAGTAAGTCATGAAGTGTGCAGAAATCTTGGTTCTGGTATGCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | GCAACAACAAAAACAAACAAAGAAAACGAGACGAGATaGACCGCTAGAAGCCATCAAAGCACACTTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ATTKTNKENETR*TARSHQSTLLS Trigger: TGACAGAAGTGTGCTTTGATGGCTTCTAGCGGTGCATCTCGTCTCGTTTTCTTTGTTTGTTTTTGTTGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACAGACCTTTAAATCATAGCCCATCTTCAGCATCTCATTCTCCAGAGTTTCAAAACGAGAAGTGTTaGGAAAGCTGGAAGAAGACG | + |
|
Preference number: 3 (lower is better) Translates to: QNRPLNHSPSSASHSPEFQNEKC*ESWKKT Trigger: CGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTTTG...AAACTCTGGAGAATGAGATGCTGAAGATGGGCTATGATTTAAAGGTCTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | CCTGTCAGGGAATGGCTGCTATTTCTTCATAAGCCTTaGCGAGCCAGGAAAAATACACAAAACATGATTATA | + |
|
Preference number: 3 (lower is better) Translates to: PVREWLLFLHKP*RARKNTQNMII Trigger: TATAATCATGTTTTGTGTATTTTTCCTGGCTCGCCAAGGCTTATGAAGAAATAGCAGCCATTCCCTGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR TCA 72 bp | TGTGGAAGGTCTAGACTGAGCGAGGCTGCTAGCTTCTaGAATATTACATTTCAATTAGGAATAAAACGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: CGRSRLSEAASF*NITFQLGIKRY Trigger: GTAGCGTTTTATTCCTAATTGAAATGTAATATTTCAGAAGCTAGCAGCCTCGCTCAGTCTAGACCTTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR GCA 72 bp | CTTAACACACTCCTAGCATACCAGAACCAAGATTTCTaGACACTTCATGACTTACTGCTTTGGTTTGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LNTLLAYQNQDF*TLHDLLLWFAF Trigger: AAATGCAAACCAAAGCAGTAAGTCATGAAGTGTGCAGAAATCTTGGTTCTGGTATGCTAGGAGTGTGTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | AGTAACAAAGCCAGAGACTATAAAGCGATTTTAAGGTaGACCCTACTAGGAGTTCCCGACATTTTTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SNKARDYKAILR*TLLGVPDIFML Trigger: AAGCATAAAAATGTCGGGAACTCCTAGTAGGGTCCACCTTAAAATCGCTTTATAGTCTCTGGCTTTGTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR TCA 72 bp | GGATCCGGCTGTAAGAAAAACAAGATCATTTTTCACTaGGGAAGAACCGTAAACTCTTACAAAGGCTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GSGCKKNKIIFH*GRTVNSYKGFS Trigger: ACTAAAGCCTTTGTAAGAGTTTACGGTTCTTCCTCAGTGAAAAATGATCTTGTTTTTCTTACAGCCGGATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | CATATATTTTATTACATGTGGTGGTTTGAACGAGAATaGCCTTTGTGGGCTCGTATATCTGAATGCTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HIFYYMWWFERE*PLWARISECLV Trigger: AACCAAGCATTCAGATATACGAGCCCACAAAGGCCATTCTCGTTCAAACCACCACATGTAATAAAATATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR TCA 72 bp | CCCCCTGGAAGTTCAGAAACAGAGCTTCTTAAAATATaGTGCTTATTTGGATTCAGATATCCAGAAACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPGSSETELLKI*CLFGFRYPETS Trigger: ACTTGTTTCTGGATATCTGAATCCAAATAAGCATCATATTTTAAGAAGCTCTGTTTCTGAACTTCCAGGGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CCA 72 bp | GACAATGTTATTTTTCTAAACTTTACAGTTAAACTTTaGTGTGAGGACCCCTTTCACAACACGCTGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: DNVIFLNFTVKL*CEDPFHNTLCE Trigger: TTCACACAGCGTGTTGTGAAAGGGGTCCTCACACCAAAGTTTAACTGTAAAGTTTAGAAAAATAACATTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR-3UTR CAA 90 bp | AAATATTACATTTCAATTAGGAATAAAACGCTACGCAAAACGCTGAGCACAGGAGTGACTAAAGTTCCATaGAATCCAATGGAAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: KYYISIRNKTLRKTLSTGVTKVP*NPMEKT Trigger: GGTCTTTTCCATTGGATTCAATGGAACTTTAGTCAC...TCCTGTGCTCAGCGTTTTGCGTAGCGTTTTATTCCTAATTGAAATGTAATATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR TCA 72 bp | GCTACTGGGAAGAGCATGGTTTATAATGGGTACCCATaGTACCACAAATCATCTTGTAACTATTCAAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: ATGKSMVYNGYP*YHKSSCNYSNN Trigger: ATTATTTGAATAGTTACAAGATGATTTGTGGTATCATGGGTACCCATTATAAACCATGCTCTTCCCAGTAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | CACGTGCTTCCCACACGTGCTGGAGACCCTGCTGTTCTGCTGGTGCGGAGTCAGATGTTCCAGTTCAGCTaGGTGTCGCCCTCCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVLPTRAGDPAVLLVRSQMFQFS*VSPSVS Trigger: GCTGACGGAGGGCGACACCCAGCTGAACTGGAACAT...CTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR TCA 90 bp | TCTCCCACGTGCTTCCCACACGTGCTGGAGACCCTGCTGTTCTGCTGGTGCGGAGGCAGAGCTCCTGAATaGGGCATTTGCTCACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTCFPHVLETLLFCWCGGRAPE*GICSHR Trigger: GCGATGTGAGCAAATGCCTCATTCAGGAGCTCTGCC...TCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTGGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR GCA 90 bp | CCACGCATGATACTGTGCCTGTCTGGAGGTCAGAGGACAACTCCCAGCAGCTGGTGCACTCTGGACCGATaGACTCGCAGCAGGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRMILCLSGGQRTTPSSWCTLDR*TRSRRC Trigger: ACAACGCCTGCTGCGAGTGCATCGGTCCAGAGTGCA...CCAGCTGCTGGGAGTTGTCCTCTGACCTCCAGACAGGCACAGTATCATGCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR GCA 90 bp | TGCAATACAACATCAGCACCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGCCCCGAGGCACAGCATaGACTCCTTACAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CNTTSAPTNVLGHPDGCLPRGTA*TPYSRG Trigger: GCCCCTGCTGTAAGGAGTGCATGCTGTGCCTCGGGG...CAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | CACGTGCTTCCCACACGTGCTGGAGACCCTGCTGTTCTGCTGGTGCGGAGTCAGATAGTCAATGCACTCTaGACCGATGCACTCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVLPTRAGDPAVLLVRSQIVNAL*TDALAA Trigger: TGCTGCGAGTGCATCGGTCCAGAGTGCATTGACTAT...CTGACTCCGCACCAGCAGAACAGCAGGGTCTCCAGCACGTGTGGGAAGCACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| 3UTR CAA 72 bp | CACAGCAGGCCAAGCCTCCAACACCATCTGCTGCTGTaGCGAGGTACTCTCACGAGAGACCACCCCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSRPSLQHHLLL*RGTLTRDHPLD Trigger: ATCCAAGGGGTGGTCTCTCGTGAGAGTACCTCGCAACAGCAGCAGATGGTGTTGGAGGCTTGGCCTGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | AGCTACTGCTCCAGCACCATGCCTGCTACCTACTGCCTCATCCCCACCACGACGGGAACAGACACGTTTTaGTGGTGCAGCTGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SYCSSTMPATYCLIPTTTGTDTF*WCSWFT Trigger: TGTGAACCAGCTGCACCACCAAAACGTGTCTGTTCC...CGTCGTGGTGGGGATGAGGCAGTAGGTAGCAGGCATGGTGCTGGAGCAGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR GCA 90 bp | TGCAATACAACATCAGCACCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGTGCACTCTGGACCGATaGACTCGCAGCAGGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CNTTSAPTNVLGHPDGCLCTLDR*TRSRRC Trigger: ACAACGCCTGCTGCGAGTGCATCGGTCCAGAGTGCA...CAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTTGATCCTGCTTTGGCAAGTGGTGTTGCTACGTGTTGGGCTTCAAGGCCTGGCAGAGCTCCTGAATaGGGCATTTGCTCACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDPALASGVATCWASRPGRAPE*GICSHR Trigger: GCGATGTGAGCAAATGCCTCATTCAGGAGCTCTGCC...AGGCCTTGAAGCCCAACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR GCA 90 bp | AACTGGCAGGTGAGAACCACACATGTACCAGGCTTGTGCTATCACGTTCAAAACCCCCGAGGCACAGCATaGACTCCTTACAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NWQVRTTHVPGLCYHVQNPRGTA*TPYSRG Trigger: GCCCCTGCTGTAAGGAGTGCATGCTGTGCCTCGGGG...GTTTTGAACGTGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | TGCAATACAACATCAGCACCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGGCTTTGTTACAGCTCTaGGACACGGGGAGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CNTTSAPTNVLGHPDGCLALLQL*DTGRHS Trigger: GCTGTGTCTCCCCGTGTCCCAGAGCTGTAACAAAGC...CAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR CAA 72 bp | GCTGACAGAGCCTTGATCCTGCTTTGGCAAGTGGTGTaGCTACGTGTTGGGCTTCAAGGCCTGGATGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ADRALILLWQVV*LRVGLQGLDGV Trigger: AACACCATCCAGGCCTTGAAGCCCAACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR CAA 72 bp | ACTTGCCCAACTGCATCCTGGGACGCTGACAGAGCCTaGATCCTGCTTTGGCAAGTGGTGTTGCTACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCPTASWDADRA*ILLWQVVLLRV Trigger: AACACGTAGCAACACCACTTGCCAAAGCAGGATCAAGGCTCTGTCAGCGTCCCAGGATGCAGTTGGGCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR TCA 90 bp | TGCAATACAACATCAGCACCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGCACTGGCAGAGCTCCTaGATGAGGCATTTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CNTTSAPTNVLGHPDGCLHWQSS*MRHLLT Trigger: TGTGAGCAAATGCCTCATTCAGGAGCTCTGCCAGTG...CAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR GCA 90 bp | AACATTCAGCTACTGCTCCAGCACCATGCCTGCTACCTACTGCCTCATCCCCACATCGCTGGCACAGAGTaGTTTGTTACAGCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIQLLLQHHACYLLPHPHIAGTE*FVTALG Trigger: TCCCAGAGCTGTAACAAAGCACTCTGTGCCAGCGAT...GTGGGGATGAGGCAGTAGGTAGCAGGCATGGTGCTGGAGCAGTAGCTGAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTACTGTTAGCCTGTGGCTGCAAGGGAACTTGCCCAATCTATGCAGACCAATGTTCCAGTTCAGCTaGGTGTCGCCCTCCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFTVSLWLQGNLPNLCRPMFQFS*VSPSVS Trigger: GCTGACGGAGGGCGACACCCAGCTGAACTGGAACAT...TGGTCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAGTAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | CCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGTCACATGACACACCTGTCACAGACACGTTTTGGTaGTGCAGCTGGTTCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTNVLGHPDGCLSHDTPVTDTFW*CSWFTV Trigger: AACTGTGAACCAGCTGCACCACCAAAACGTGTCTGT...GACAGGTGTGTCATGTGACAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | AGCTACTGCTCCAGCACCATGCCTGCTACCTACTGCCTCATCCCCACCACGACGTCTTACACTGGTGGATaGACATGCAGTCATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYCSSTMPATYCLIPTTTSYTGG*TCSHQS Trigger: ACTTTGATGACTGCATGTCCATCCACCAGTGTAAGA...CGTCGTGGTGGGGATGAGGCAGTAGGTAGCAGGCATGGTGCTGGAGCAGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | AACATTCAGCTACTGCTCCAGCACCATGCCTGCTACCTACTGCCTCATCCCCACGAAACCAGCGATACTTaGATGCACCCATGGATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NIQLLLQHHACYLLPHPHETSDT*MHPWIR Trigger: GCGAATCCATGGGTGCATCCAAGTATCGCTGGTTTC...GTGGGGATGAGGCAGTAGGTAGCAGGCATGGTGCTGGAGCAGTAGCTGAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR TCA 90 bp | TACATTCCAGGCCAGCCAGGGCTGCACAGAGATCCTGTCTCAAAACCAAACCAACACTGGCAGAGCTCCTaGATGAGGCATTTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YIPGQPGLHRDPVSKPNQHWQSS*MRHLLT Trigger: TGTGAGCAAATGCCTCATTCAGGAGCTCTGCCAGTG...TTGGTTTGGTTTTGAGACAGGATCTCTGTGCAGCCCTGGCTGGCCTGGAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR GCA 90 bp | GAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGTTTTGCACTCTGGACCGATaGACTCGCAGCAGGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVFGKLEEDGTFCQHVRFCTLDR*TRSRRC Trigger: ACAACGCCTGCTGCGAGTGCATCGGTCCAGAGTGCA...AAACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR CCA 90 bp | ACCACACCAGCACTACAGGCGGACAGGGGACATAACATCCAAACCACTGTCAGTGGAACAGACACGTTTTaGTGGTGCAGCTGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TTPALQADRGHNIQTTVSGTDTF*WCSWFT Trigger: TGTGAACCAGCTGCACCACCAAAACGTGTCTGTTCC...ACTGACAGTGGTTTGGATGTTATGTCCCCTGTCCGCCTGTAGTGCTGGTGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGTTTTCCCAGGACTCCATAGTCAATGCACTCTaGACCGATGCACTCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLEEDGTFCQHVRFSQDSIVNAL*TDALAA Trigger: TGCTGCGAGTGCATCGGTCCAGAGTGCATTGACTAT...GGAGTCCTGGGAAAACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR GCA 90 bp | TGCAATACAACATCAGCACCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGCAAAGTAAACCACTGTaGACATGCGCTCTTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CNTTSAPTNVLGHPDGCLQSKPL*TCALCR Trigger: GCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTG...CAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGGTGCTGATGTTGTATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTAGCCTGTGGCTGCAAGGGAACTTGCCCAATCTATGCAGACCAGGCCTTTTACTCCCATAGTCAATaGACTCTGGACCGATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLACGCKGTCPIYADQAFYSHSQ*TLDRCT Trigger: AGTGCATCGGTCCAGAGTGCATTGACTATGGGAGTA...AAAGGCCTGGTCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCTACAACTGGCAGGTGAGAACCACACATGTACCAGGCTTGTGCTATCAGCTTTGTTACAGCTCTaGGACACGGGGAGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLQLAGENHTCTRLVLSALLQL*DTGRHS Trigger: GCTGTGTCTCCCCGTGTCCCAGAGCTGTAACAAAGC...TGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTAGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR GCA 90 bp | AGGGACCTAGTGTTCTACAACTGGCAGGTGAGAACCACACATGTACCAGGCTTGCAAAGTAAACCACTGTaGACATGCGCTCTTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RDLVFYNWQVRTTHVPGLQSKPL*TCALCR Trigger: GCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTG...CAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTAGAACACTAGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | TCTTTACTGTTAGCCTGTGGCTGCAAGGGAACTTGCCCAATCTATGCAGACCAGATAGTCAATGCACTCTaGACCGATGCACTCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLACGCKGTCPIYADQIVNAL*TDALAA Trigger: TGCTGCGAGTGCATCGGTCCAGAGTGCATTGACTAT...CTGGTCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAGTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| 3UTR CAA 72 bp | CCAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTaGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLCYHVQNEKC*ESWKKTAPSVS Trigger: GCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGGAGTTCCCGACATTTTTATGCTTCTCTGTCCACATCTGTGCATCCTTCCTCGCAGCAGGCGTTGTaGAACCAGCGATACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRSSRHFYASLSTSVHPSSQQAL*NQRYLD Trigger: ATCCAAGTATCGCTGGTTTCACAACGCCTGCTGCGA...GGAAGGATGCACAGATGTGGACAGAGAAGCATAAAAATGTCGGGAACTCCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR GCA 90 bp | GAGATGTGTGACTATAGGGACCTAGTGTTCTACAACTGGCAGGTGAGAACCACAATCGCTGGCACAGAGTaGTTTGTTACAGCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMCDYRDLVFYNWQVRTTIAGTE*FVTALG Trigger: TCCCAGAGCTGTAACAAAGCACTCTGTGCCAGCGAT...TGTGGTTCTCACCTGCCAGTTGTAGAACACTAGGTCCCTATAGTCACACATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | AACGAGAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGAAACCAGCGATACTTaGATGCACCCATGGATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NEKCLESWKKTAPSVSMSETSDT*MHPWIR Trigger: GCGAATCCATGGGTGCATCCAAGTATCGCTGGTTTC...TGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAACCAACATTCAGCTACTGCTCCAGCACCATGCCTGCTACCTACTGCCTCTGCAGTTCATACACTTaGCAGTTTTACTCCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CEPTFSYCSSTMPATYCLCSSYT*QFYSHS Trigger: ACTATGGGAGTAAAACTGTCAAGTGTATGAACTGCA...GAGGCAGTAGGTAGCAGGCATGGTGCTGGAGCAGTAGCTGAATGTTGGTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGTTTCACCCTTGTACAAGCTGGTCCAGTGGACTCTGTGGGGACATCCTACTGGTGGATGGACATaGAGTCATCAAAGTAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RKVSPLYKLVQWTLWGHPTGGWT*SHQSKP Trigger: TGGTTTACTTTGATGACTGCATGTCCATCCACCAGT...AGGATGTCCCCACAGAGTCCACTGGACCAGCTTGTACAAGGGTGAAACCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR GCA 90 bp | AACTGGCAGGTGAGAACCACACATGTACCAGGCTTGTGCTATCACGTTCAAAACTACTCCCATAGTCAATaGACTCTGGACCGATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NWQVRTTHVPGLCYHVQNYSHSQ*TLDRCT Trigger: AGTGCATCGGTCCAGAGTGCATTGACTATGGGAGTA...GTTTTGAACGTGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGTTTTACTCCCATAGTCAATaGACTCTGGACCGATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EVFGKLEEDGTFCQHVRFYSHSQ*TLDRCT Trigger: AGTGCATCGGTCCAGAGTGCATTGACTATGGGAGTA...AAACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACCTAGTGTTCTACAACTGGCAGGTGAGAACCACACATGTACCAGGCTTGTCTTACACTGGTGGATaGACATGCAGTCATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDLVFYNWQVRTTHVPGLSYTGG*TCSHQS Trigger: ACTTTGATGACTGCATGTCCATCCACCAGTGTAAGA...CAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTAGAACACTAGGTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTCCTCTTTCCAGCCCTATCAGGACTGGTCAGTCTTTGACAGTGCAATAGATATCTTACACTGGTaGATGGACATGCAGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSSFQPYQDWSVFDSAIDILHW*MDMQSS Trigger: TGATGACTGCATGTCCATCCACCAGTGTAAGATATC...TATTGCACTGTCAAAGACTGACCAGTCCTGATAGGGCTGGAAAGAGGAAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCACTTGGATGCACCCATaGATTCGCAGGATATCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSRSKREVFGKLEEDGTTWMHP*IRRISY Trigger: GTAAGATATCCTGCGAATCCATGGGTGCATCCAAGT...GGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGGTTTGAACGAGAATGGCCTTTGTGGGCTCGTATATCTGAATGCTTGGACTTGGATGCACCCATaGATTCGCAGGATATCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CGGLNENGLCGLVYLNAWTWMHP*IRRISY Trigger: GTAAGATATCCTGCGAATCCATGGGTGCATCCAAGT...CCAAGCATTCAGATATACGAGCCCACAAAGGCCATTCTCGTTCAAACCACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAAGAAGAAACCAGCGATACTTaGATGCACCCATGGATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLSRSKREVFGKLEEETSDT*MHPWIR Trigger: GCGAATCCATGGGTGCATCCAAGTATCGCTGGTTTC...TTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| 3UTR CAA 72 bp | TGGCTACTTCCTGACCCAGGTCATCCTCAAGTGCATTaGATGAAGTTCCAAAGGTATGCCATGACACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLLPDPGHPQVH*MKFQRYAMTLL Trigger: CAAGAGTGTCATGGCATACCTTTGGAACTTCATCAAATGCACTTGAGGATGACCTGGGTCAGGAAGTAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR TCA 90 bp | CTACAACTGGCAGGTGAGAACCACACATGTACCAGGCTTGTGCTATCACGTTCATGCAGTTCATACACTTaGCAGTTTTACTCCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLAGENHTCTRLVLSRSCSSYT*QFYSHS Trigger: ACTATGGGAGTAAAACTGTCAAGTGTATGAACTGCA...TGAACGTGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGTTGCAGTTCATACACTTaGCAGTTTTACTCCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKCLESWKKTAPSVSMSGCSSYT*QFYSHS Trigger: ACTATGGGAGTAAAACTGTCAAGTGTATGAACTGCA...ACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAAGAAGACACGTTTTGGTGGTaGAGCTGGTTCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLSRSKREVFGKLEEDTFWW*SWFTVS Trigger: AGAAACTGTGAACCAGCTGCACCACCAAAACGTGTC...TTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
||
| CDS-3UTR CCA 90 bp | AAACGAGAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCGATATCTTACACTGGTaGATGGACATGCAGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KREVFGKLEEDGTFCQHVDILHW*MDMQSS Trigger: TGATGACTGCATGTCCATCCACCAGTGTAAGATATC...GACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CAA 72 bp | TACAACTGGCAGGTGAGAACCACACATGTACCAGGCTaGTGCTATCACGTTCAAAACGAGAAGTGTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YNWQVRTTHVPG*CYHVQNEKCLE Trigger: TTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGTACATGTGTGGTTCTCACCTGCCAGTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233663.2 |
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| 3UTR CAA 72 bp | TTTCCTCTTTCCAGCCCTATCAGGACTGGTCAGTCTTaGACAGTGCAATACAACATCAGCACCCACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FPLSSPIRTGQS*TVQYNISTHKC Trigger: ACATTTGTGGGTGCTGATGTTGTATTGCACTGTCAAAGACTGACCAGTCCTGATAGGGCTGGAAAGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| CDS-3UTR CCA 90 bp | ACCAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAAGAATTTTGGTGGTGCAGCTaGTTCACAGTTTCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLVLSRSKREVFGKLEEFWWCS*FTVSRK Trigger: CTTCCTAGAAACTGTGAACCAGCTGCACCACCAAAA...TTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| 3UTR CAA 72 bp | TTTTATTACATGTGGTGGTTTGAACGAGAATGGCCTTaGTGGGCTCGTATATCTGAATGCTTGGTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FYYMWWFEREWP*WARISECLVPS Trigger: ACTGGGAACCAAGCATTCAGATATACGAGCCCACAAAGGCCATTCTCGTTCAAACCACCACATGTAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
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| 3UTR CAA 72 bp | CATTTGATGAAGTTCCAAAGGTATGCCATGACACTCTaGGTAGACAAAACTCTTCTATACCAGAGCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLMKFQRYAMTL*VDKTLLYQSSD Trigger: GTCACTGCTCTGGTATAGAAGAGTTTTGTCTACCAAGAGTGTCATGGCATACCTTTGGAACTTCATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| CDS-3UTR CCA 90 bp | CAGCTCGCTGGCCCTAGGCAAAACTCTTCTGTTGTAAAATATAGTAAATATTTAACAGACACGTTTTGGTaGTGCAGCTGGTTCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLAGPRQNSSVVKYSKYLTDTFW*CSWFTV Trigger: AACTGTGAACCAGCTGCACCACCAAAACGTGTCTGT...TAAATATTTACTATATTTTACAACAGAAGAGTTTTGCCTAGGGCCAGCGAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| CDS-3UTR GCA 90 bp | AAATATTACATTTCAATTAGGAATAAAACGCTACGCAAAACGCTGAGCACAGGAACTGGTGGATGGACATaGAGTCATCAAAGTAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KYYISIRNKTLRKTLSTGTGGWT*SHQSKP Trigger: TGGTTTACTTTGATGACTGCATGTCCATCCACCAGT...TCCTGTGCTCAGCGTTTTGCGTAGCGTTTTATTCCTAATTGAAATGTAATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| CDS GCA 90 bp | GTGTCGCCCTCCGTCAGCGCCCTGAACAGGGACGGAATGGGCTCGTaGAGCTCCTCCACGGTGCTCTTGGATGTGGGCGGGGTGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSPSVSALNRDGMGS*SSSTVLLDVGGVSL Trigger: CAGCGACACCCCGCCCACATCCAAGAGCACCGTGGAGGAGCTGCACGAGCCCATTCCGTCCCTGTTCAGGGCGCTGACGGAGGGCGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS TCA 90 bp | AGACGATGTTCCAGTTCAGCTGGGTGTCGCCCTCCGTCAGCGCCCTaGACAGGGACGGAATGGGCTCGTGCAGCTCCTCCACGGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRCSSSAGCRPPSAP*TGTEWARAAPPRCS Trigger: AGAGCACCGTGGAGGAGCTGCACGAGCCCATTCCGTCCCTGTTCAGGGCGCTGACGGAGGGCGACACCCAGCTGAACTGGAACATCGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS GCA 90 bp | CGGTGCTCTTGGATGTGGGCGGGGTGTCGCTGTAATTCCGAGGGTTaGACATACCGACACAGTCGCAGCACTCGTCCCACAGGGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RCSWMWAGCRCNSEG*TYRHSRSTRPTGPR Trigger: TCGGGGCCCTGTGGGACGAGTGCTGCGACTGTGTCGGTATGTGCAACCCTCGGAATTACAGCGACACCCCGCCCACATCCAAGAGCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 90 bp | GACAGCTCCTCTGCCACAGGGAAGGAGACGATGTTCCAGTTCAGCTaGGTGTCGCCCTCCGTCAGCGCCCTGAACAGGGACGGAATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DSSSATGKETMFQFS*VSPSVSALNRDGMG Trigger: GCCCATTCCGTCCCTGTTCAGGGCGCTGACGGAGGGCGACACCCAGCTGAACTGGAACATCGTCTCCTTCCCTGTGGCAGAGGAGCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 90 bp | GGGACGGAATGGGCTCGTGCAGCTCCTCCACGGTGCTCTTGGATGTaGGCGGGGTGTCGCTGTAATTCCGAGGGTTGCACATACCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GTEWARAAPPRCSWM*AGCRCNSEGCTYRH Trigger: GTGTCGGTATGTGCAACCCTCGGAATTACAGCGACACCCCGCCCACATCCAAGAGCACCGTGGAGGAGCTGCACGAGCCCATTCCGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS-3UTR CAA 90 bp | CCCACAAATGTGCTAGGCCACCCTGATGGCTGCCTGTCACATGACACACCTGTCAAGGGGGCGTGGACATaGTTGCTGGGAACAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: PTNVLGHPDGCLSHDTPVKGAWT*LLGTDT Trigger: CGTGTCTGTTCCCAGCAACAATGTCCACGCCCCCTT...GACAGGTGTGTCATGTGACAGGCAGCCATCAGGGTGGCCTAGCACATTTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTTACTGTTAGCCTGTGGCTGCAAGGGAACTTGCCCAATCTATGCAGACCATCCTCCACGGTGCTCTaGGATGTGGGCGGGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VFTVSLWLQGNLPNLCRPSSTVL*DVGGVS Trigger: CGACACCCCGCCCACATCCAAGAGCACCGTGGAGGA...TGGTCTGCATAGATTGGGCAAGTTCCCTTGCAGCCACAGGCTAACAGTAAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233580.2 |
||
| CDS GCA 90 bp | GCAGAGCTCCTGAATGAGGCATTTGCTCACATCGCTGGCACAGAGTaGTTTGTTACAGCTCTGGGACACGGGGAGACACAGCAGGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: AELLNEAFAHIAGTE*FVTALGHGETQQER Trigger: ACGTTCCTGCTGTGTCTCCCCGTGTCCCAGAGCTGTAACAAAGCACTCTGTGCCAGCGATGTGAGCAAATGCCTCATTCAGGAGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS-3UTR CAA 90 bp | GTGCTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTCCTCCACGGTGCTCTaGGATGTGGGCGGGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VLSRSKREVFGKLEEDGTSSTVL*DVGGVS Trigger: CGACACCCCGCCCACATCCAAGAGCACCGTGGAGGA...GGTGCCGTCTTCTTCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| CDS GCA 90 bp | ACTGGTGGATGGACATGCAGTCATCAAAGTAAACCACTGTGCACATaGGCTCTTTGTCGCTGGGGAAGGGGGCGTGGACATTGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGGWTCSHQSKPLCT*ALCRWGRGRGHCCW Trigger: CCAGCAACAATGTCCACGCCCCCTTCCCCAGCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTGATGACTGCATGTCCATCCACCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS-3UTR CAA 90 bp | ATGTACCAGGCTTGTGCTATCACGTTCAAAACGAGAAGTGTTTGGAAAGCTGGAGTGCACATGCGCTCTTaGTCGCTGGGGAAGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MYQACAITFKTRSVWKAGVHMRS*SLGKGA Trigger: CGCCCCCTTCCCCAGCGACAAAGAGCGCATGTGCAC...TCCAGCTTTCCAAACACTTCTCGTTTTGAACGTGATAGCACAAGCCTGGTACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| CDS GCA 90 bp | TCTTACACTGGTGGATGGACATGCAGTCATCAAAGTAAACCACTGTaGACATGCGCTCTTTGTCGCTGGGGAAGGGGGCGTGGACATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SYTGGWTCSHQSKPL*TCALCRWGRGRGHC Trigger: ACAATGTCCACGCCCCCTTCCCCAGCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTGATGACTGCATGTCCATCCACCAGTGTAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 90 bp | TGGTGCAGCTGGTTCACAGTTTCTAGGAAGGAGACTAGGTTTTCATaGTGTGACAGCTCCTCTGCCACAGGGAAGGAGACGATGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WCSWFTVSRKETRFS*CDSSSATGKETMFQ Trigger: CTGGAACATCGTCTCCTTCCCTGTGGCAGAGGAGCTGTCACACCATGAAAACCTAGTCTCCTTCCTAGAAACTGTGAACCAGCTGCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 90 bp | TGCAGTCATCAAAGTAAACCACTGTGCACATGCGCTCTTTGTCGCTaGGGAAGGGGGCGTGGACATTGTTGCTGGGAACAGACACGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSHQSKPLCTCALCR*GRGRGHCCWEQTRF Trigger: AAAACGTGTCTGTTCCCAGCAACAATGTCCACGCCCCCTTCCCCAGCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTGATGACTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 90 bp | ACTCGCAGCAGGCGTTGTGAAACCAGCGATACTTGGATGCACCCATaGATTCGCAGGATATCTTACACTGGTGGATGGACATGCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRSRRCETSDTWMHP*IRRISYTGGWTCSH Trigger: ATGACTGCATGTCCATCCACCAGTGTAAGATATCCTGCGAATCCATGGGTGCATCCAAGTATCGCTGGTTTCACAACGCCTGCTGCGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTTTGGAAAGCTGGAAGAAGACGGCACCTTCTGTCAGCATGTCAGGTTTTAAGGGGGCGTGGACATaGTTGCTGGGAACAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: KCLESWKKTAPSVSMSGFKGAWT*LLGTDT Trigger: CGTGTCTGTTCCCAGCAACAATGTCCACGCCCCCTT...AAAACCTGACATGCTGACAGAAGGTGCCGTCTTCTTCCAGCTTTCCAAACACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024906.6 |
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| CDS CCA 90 bp | GCGTGGACATTGTTGCTGGGAACAGACACGTTTTGGTGGTGCAGCTaGTTCACAGTTTCTAGGAAGGAGACTAGGTTTTCATGGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AWTLLLGTDTFWWCS*FTVSRKETRFSWCD Trigger: GTCACACCATGAAAACCTAGTCTCCTTCCTAGAAACTGTGAACCAGCTGCACCACCAAAACGTGTCTGTTCCCAGCAACAATGTCCACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS GCA 90 bp | ATGCACCCATGGATTCGCAGGATATCTTACACTGGTGGATGGACATaGAGTCATCAAAGTAAACCACTGTGCACATGCGCTCTTTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: MHPWIRRISYTGGWT*SHQSKPLCTCALCR Trigger: GCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTGATGACTGCATGTCCATCCACCAGTGTAAGATATCCTGCGAATCCATGGGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 90 bp | GCAGTTCATACACTTGACAGTTTTACTCCCATAGTCAATGCACTCTaGACCGATGCACTCGCAGCAGGCGTTGTGAAACCAGCGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: AVHTLDSFTPIVNAL*TDALAAGVVKPAIL Trigger: AAGTATCGCTGGTTTCACAACGCCTGCTGCGAGTGCATCGGTCCAGAGTGCATTGACTATGGGAGTAAAACTGTCAAGTGTATGAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 ENSMUST00000233663.2 |
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| CDS GCA 72 bp | TCCGTCAGCGCCCTGAACAGGGACGGAATGGGCTCGTaGAGCTCCTCCACGGTGCTCTTGGATGTGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSALNRDGMGS*SSSTVLLDVGG Trigger: CCCGCCCACATCCAAGAGCACCGTGGAGGAGCTGCACGAGCCCATTCCGTCCCTGTTCAGGGCGCTGACGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS TCA 72 bp | TCCAGTTCAGCTGGGTGTCGCCCTCCGTCAGCGCCCTaGACAGGGACGGAATGGGCTCGTGCAGCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSAGCRPPSAP*TGTEWARAAPP Trigger: TGGAGGAGCTGCACGAGCCCATTCCGTCCCTGTTCAGGGCGCTGACGGAGGGCGACACCCAGCTGAACTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS GCA 72 bp | ACAGGGACGGAATGGGCTCGTGCAGCTCCTCCACGGTaGTCTTGGATGTGGGCGGGGTGTCGCTGTAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGTEWARAAPPR*SWMWAGCRCNS Trigger: GGAATTACAGCGACACCCCGCCCACATCCAAGAGCACCGTGGAGGAGCTGCACGAGCCCATTCCGTCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
||
| CDS CCA 72 bp | TGGGCTCGTGCAGCTCCTCCACGGTGCTCTTGGATGTaGGCGGGGTGTCGCTGTAATTCCGAGGGTTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: WARAAPPRCSWM*AGCRCNSEGCT Trigger: TGTGCAACCCTCGGAATTACAGCGACACCCCGCCCACATCCAAGAGCACCGTGGAGGAGCTGCACGAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 72 bp | ACGGAATGGGCTCGTGCAGCTCCTCCACGGTGCTCTTaGATGTGGGCGGGGTGTCGCTGTAATTCCGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TEWARAAPPRCS*MWAGCRCNSEG Trigger: ACCCTCGGAATTACAGCGACACCCCGCCCACATCCAAGAGCACCGTGGAGGAGCTGCACGAGCCCATTCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS CCA 72 bp | TCTGCCACAGGGAAGGAGACGATGTTCCAGTTCAGCTaGGTGTCGCCCTCCGTCAGCGCCCTGAACAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SATGKETMFQFS*VSPSVSALNRD Trigger: GTCCCTGTTCAGGGCGCTGACGGAGGGCGACACCCAGCTGAACTGGAACATCGTCTCCTTCCCTGTGGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS GCA 72 bp | TGGATGTGGGCGGGGTGTCGCTGTAATTCCGAGGGTTaGACATACCGACACAGTCGCAGCACTCGTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: WMWAGCRCNSEG*TYRHSRSTRPT Trigger: TGTGGGACGAGTGCTGCGACTGTGTCGGTATGTGCAACCCTCGGAATTACAGCGACACCCCGCCCACATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
||
| CDS TCA 72 bp | ATGCACTCTGGACCGATGCACTCGCAGCAGGCGTTGTaGAACCAGCGATACTTGGATGCACCCATGGATTCG | + |
|
Preference number: 6 (lower is better) Translates to: MHSGPMHSQQAL*NQRYLDAPMDS Trigger: CGAATCCATGGGTGCATCCAAGTATCGCTGGTTTCACAACGCCTGCTGCGAGTGCATCGGTCCAGAGTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 ENSMUST00000233663.2 |
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| CDS GCA 72 bp | GGTGGATGGACATGCAGTCATCAAAGTAAACCACTGTaGACATGCGCTCTTTGTCGCTGGGGAAGGGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GGWTCSHQSKPL*TCALCRWGRGR Trigger: ACGCCCCCTTCCCCAGCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTGATGACTGCATGTCCATCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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| CDS GCA 72 bp | CTGAATGAGGCATTTGCTCACATCGCTGGCACAGAGTaGTTTGTTACAGCTCTGGGACACGGGGAGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: LNEAFAHIAGTE*FVTALGHGETQ Trigger: CTGTGTCTCCCCGTGTCCCAGAGCTGTAACAAAGCACTCTGTGCCAGCGATGTGAGCAAATGCCTCATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
||
| CDS GCA 72 bp | TGGACATGCAGTCATCAAAGTAAACCACTGTGCACATaGGCTCTTTGTCGCTGGGGAAGGGGGCGTGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: WTCSHQSKPLCT*ALCRWGRGRGH Trigger: ATGTCCACGCCCCCTTCCCCAGCGACAAAGAGCGCATGTGCACAGTGGTTTACTTTGATGACTGCATGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
||
| CDS GCA 72 bp | CAGTTTTACTCCCATAGTCAATGCACTCTGGACCGATaGACTCGCAGCAGGCGTTGTGAAACCAGCGATACT | + |
|
Preference number: 6 (lower is better) Translates to: QFYSHSQCTLDR*TRSRRCETSDT Trigger: AGTATCGCTGGTTTCACAACGCCTGCTGCGAGTGCATCGGTCCAGAGTGCATTGACTATGGGAGTAAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 ENSMUST00000233663.2 |
||
| CDS CCA 72 bp | GCGTGGACATTGTTGCTGGGAACAGACACGTTTTGGTaGTGCAGCTGGTTCACAGTTTCTAGGAAGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: AWTLLLGTDTFW*CSWFTVSRKET Trigger: AGTCTCCTTCCTAGAAACTGTGAACCAGCTGCACCACCAAAACGTGTCTGTTCCCAGCAACAATGTCCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
||
| CDS GCA 72 bp | TGGACATTGTTGCTGGGAACAGACACGTTTTGGTGGTaGAGCTGGTTCACAGTTTCTAGGAAGGAGACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: WTLLLGTDTFWW*SWFTVSRKETR Trigger: CCTAGTCTCCTTCCTAGAAACTGTGAACCAGCTGCACCACCAAAACGTGTCTGTTCCCAGCAACAATGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
||
| CDS CCA 72 bp | ACACTTGACAGTTTTACTCCCATAGTCAATGCACTCTaGACCGATGCACTCGCAGCAGGCGTTGTGAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: TLDSFTPIVNAL*TDALAAGVVKP Trigger: TGGTTTCACAACGCCTGCTGCGAGTGCATCGGTCCAGAGTGCATTGACTATGGGAGTAAAACTGTCAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 ENSMUST00000233663.2 |
||
| CDS CCA 72 bp | TTGTTGCTGGGAACAGACACGTTTTGGTGGTGCAGCTaGTTCACAGTTTCTAGGAAGGAGACTAGGTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLGTDTFWWCS*FTVSRKETRFS Trigger: TGAAAACCTAGTCTCCTTCCTAGAAACTGTGAACCAGCTGCACCACCAAAACGTGTCTGTTCCCAGCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024906.6 ENSMUST00000233580.2 |
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