Pregenerated sensors for TWNK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025209Ensembl transcript IDs: ENSMUST00000026227.3, ENSMUST00000236685.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGAGCTTCAGCAAACCTCCTGTTTCACGGCAGCTTCAGGGGCCTaGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCG | + |
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Preference number: 1 (lower is better) Translates to: LELQQTSCFTAASGA*PLHLPCSFPPEGLA Trigger: CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGAAGCTGCCGTGAAACAGGAGGTTTGCTGAAGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 90 bp | GGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTaGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GPGLFICLAHSHLRV*RVSIWIPFCRGSQA Trigger: GGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 90 bp | CCCAGTAGCTGCTCAATTAAAAATTTTCACCATGGAGTCCAGCCCTaGGCTGGGAAGGGTTCTGTAGCTCAGGACTATATGGAAGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: PSSCSIKNFHHGVQP*AGKGSVAQDYMEEP Trigger: GGGCTCTTCCATATAGTCCTGAGCTACAGAACCCTTCCCAGCCCAGGGCTGGACTCCATGGTGAAAATTTTTAATTGAGCAGCTACTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 90 bp | GAGTCTAGCATCCTTCCCTTTGCTTCGTTCCTTTCACCAAAACGCTaGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ESSILPFASFLSPKR*FFGNSLCLSSAIQK Trigger: TTTCTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGAAAGGAACGAAGCAAAGGGAAGGATGCTAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGATCTGGATCCCTTTCTaGAGAGGTTCACAGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: SGAWPLHLPCSFPPEGLAIWIPF*RGSQAH Trigger: ATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGAT...CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCAGTCCAGCCCTGGGCTaGGAAGGGTTCTGTAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: FPPEGLACFHLDPFLQRFSPALG*EGFCSS Trigger: TGAGCTACAGAACCCTTCCCAGCCCAGGGCTGGACT...GAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCAATCTGGATCCCTTTCTaGAGAGGTTCACAGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: AVKSAPTGQALQAYSFFPIWIPF*RGSQAH Trigger: ATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGAT...TGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGGAGCAGCTTCCATCTTTaGAGCCCTAAGAGTACAGGA | + |
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Preference number: 2 (lower is better) Translates to: VKSAPTGQALQAYSFFPWSSFHL*SPKSTG Trigger: TCCTGTACTCTTAGGGCTTCAAAGATGGAAGCTGCT...CCATGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTTGTCTAGTTCTCCCATaGACTCTGTTCAGACACCTT | + |
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Preference number: 2 (lower is better) Translates to: GPGLFICLAHSHLRVWRVCLVLP*TLFRHL Trigger: AAGGTGTCTGAACAGAGTGCATGGGAGAACTAGACA...AACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTAGTCCAGCCCTGGGCTaGGAAGGGTTCTGTAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSSPALG*EGFCSS Trigger: TGAGCTACAGAACCCTTCCCAGCCCAGGGCTGGACT...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTCCCATaGACTCTGTTCAGACACCTT | + |
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Preference number: 2 (lower is better) Translates to: EGLACFHLDPFLQRFTGPCLVLP*TLFRHL Trigger: AAGGTGTCTGAACAGAGTGCATGGGAGAACTAGACA...TGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTAAAACGCTGGTTCTTTaGAAACAGCCTTTGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSKTLVL*KQPLSF Trigger: GAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTT...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR GCA 72 bp | ACGGCAGCTTCAGGGGCCTGGCCTCTTCATCTGCCTTaGTCATTCCCACCTGAGGGTCTGGCGTGTTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: TAASGAWPLHLP*SFPPEGLACFH Trigger: ATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGAAGCTGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR GCA 72 bp | GTTTCACGGCAGCTTCAGGGGCCTGGCCTCTTCATCTaGCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTT | + |
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Preference number: 3 (lower is better) Translates to: VSRQLQGPGLFI*LAHSHLRVWRV Trigger: AACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGAAGCTGCCGTGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 72 bp | CAGCAAACCTCCTGTTTCACGGCAGCTTCAGGGGCCTaGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAG | + |
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Preference number: 3 (lower is better) Translates to: QQTSCFTAASGA*PLHLPCSFPPE Trigger: CTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGAAGCTGCCGTGAAACAGGAGGTTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR TCA 72 bp | GGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTaGGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: GLASSSALLIPT*GSGVFPSGSLS Trigger: AGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 72 bp | CTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTaGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: LFICLAHSHLRV*RVSIWIPFCRG Trigger: ACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGGCTTTGGAAACAGCCTTaGTCTTTCCAGTGCTATACA | + |
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Preference number: 3 (lower is better) Translates to: VKSAPTGQALQAYSFFPWLWKQP*SFQCYT Trigger: TGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAG...CCATGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGGCAAAACGCTGGTTCTTaGGAAACAGCCTTTGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: VKSAPTGQALQAYSFFPWQNAGS*ETAFVF Trigger: AAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTG...CCATGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 72 bp | GGCACTGCAGGCTTACAGCTTCTTTCCATGGTCCAGTaGGAAGCAGCTTCCATCTTTGAAGCCCTAAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: GTAGLQLLSMVQ*EAASIFEALRV Trigger: TACTCTTAGGGCTTCAAAGATGGAAGCTGCTTCCCACTGGACCATGGAAAGAAGCTGTAAGCCTGCAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCCTTTGGAAACAGCCTTaGTCTTTCCAGTGCTATACA | + |
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Preference number: 3 (lower is better) Translates to: FPPEGLACFHLDPFLQRFLWKQP*SFQCYT Trigger: TGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAG...GAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCCAAAACGCTGGTTCTTaGGAAACAGCCTTTGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: FPPEGLACFHLDPFLQRFQNAGS*ETAFVF Trigger: AAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTG...GAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR TCA 72 bp | ACTAATCAAAACAAGCTGACGAGGCAGGCGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: TNQNKLTRQADF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCGTCAGCTTGTTTTGATTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR TCA 72 bp | TCTTTCCATGGTCCAGTGGGAAGCAGCTTCCATCTTTaGAGCCCTAAGAGTACAGGATCAGCACCTCAGATC | + |
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Preference number: 3 (lower is better) Translates to: SFHGPVGSSFHL*SPKSTGSAPQI Trigger: GATCTGAGGTGCTGATCCTGTACTCTTAGGGCTTCAAAGATGGAAGCTGCTTCCCACTGGACCATGGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR GCA 72 bp | CTGCAGAGGTTCACAGGCCCATGTCTAGTTCTCCCATaGACTCTGTTCAGACACCTTTTCAGACTGACTAAT | + |
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Preference number: 3 (lower is better) Translates to: LQRFTGPCLVLP*TLFRHLFRLTN Trigger: ATTAGTCAGTCTGAAAAGGTGTCTGAACAGAGTGCATGGGAGAACTAGACATGGGCCTGTGAACCTCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCTTCCATCTTTGAAGCCCTAAGAGTACAGGATCAGCACCTCAGATCAATTCTAGCATCCTTCCCTTaGCTTCGTTCCTTTCACCAA | + |
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Preference number: 3 (lower is better) Translates to: AASIFEALRVQDQHLRSILASFP*LRSFHQ Trigger: TTGGTGAAAGGAACGAAGCAAAGGGAAGGATGCTAG...AATTGATCTGAGGTGCTGATCCTGTACTCTTAGGGCTTCAAAGATGGAAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 72 bp | ATCCTTCCCTTTGCTTCGTTCCTTTCACCAAAACGCTaGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: ILPFASFLSPKR*FFGNSLCLSSA Trigger: AGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGAAAGGAACGAAGCAAAGGGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| 3UTR CCA 72 bp | CTTTGCTTCGTTCCTTTCACCAAAACGCTGGTTCTTTaGAAACAGCCTTTGTCTTTCCAGTGCTATACAGAA | + |
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Preference number: 3 (lower is better) Translates to: LCFVPFTKTLVL*KQPLSFQCYTE Trigger: TTCTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGAAAGGAACGAAGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR CCA 90 bp | GCAGTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCACTGGCTGGGCGGGGCTaGGGTCCTGGCCTAAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: AVKSAPTGQALQAYSFFPLAGRG*GPGLSK Trigger: TTTGCTTAGGCCAGGACCCCAGCCCCGCCCAGCCAG...TGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR CCA 90 bp | GGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTCTCGTCCCTCCACACTaGCCTGCAAGTCTTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GPGLFICLAHSHLRVWRVLVPPH*PASLPS Trigger: GCTGGGAAGACTTGCAGGCCAGTGTGGAGGGACGAG...AACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR CCA 90 bp | TTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCCTGGCGCCAAGCTTCTaGGCAGGCCCCTCCTACCCA | + |
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Preference number: 4 (lower is better) Translates to: FPPEGLACFHLDPFLQRFLAPSF*AGPSYP Trigger: TGGGTAGGAGGGGCCTGCCCAGAAGCTTGGCGCCAG...GAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR TCA 90 bp | TCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTACTCCATTTTCCTaGCCCTCAGCCCCTAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SGAWPLHLPCSFPPEGLACTPFS*PSAPSS Trigger: GCTACTAGGGGCTGAGGGTCAGGAAAATGGAGTACA...CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR TCA 90 bp | CTGGCTCTACAAAGCAGAGCAGAGAGGCTCGGTGCCTACCGCATCAGCCTTCGGGAGGAGAGCTGCTCGTaGCCCATCATGAACTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LALQSRAERLGAYRISLREESCS*PIMNCK Trigger: CTTGCAGTTCATGATGGGTCACGAGCAGCTCTCCTC...CCGAAGGCTGATGCGGTAGGCACCGAGCCTCTCTGCTCTGCTTTGTAGAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR CCA 90 bp | GAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCAGTAGGACACCCTCTTTaGCCCCATCCCCTCGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: EGLACFHLDPFLQRFTGPVGHPL*PHPLVP Trigger: AGGGACGAGGGGATGGGGCCAAAGAGGGTGTCCTAC...TGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR CCA 90 bp | TCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGGGCTTCCTCAGGGTCTaGAAGCTCCCAAAGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SGAWPLHLPCSFPPEGLAGFLRV*KLPKRY Trigger: ATACCTCTTTGGGAGCTTCCAGACCCTGAGGAAGCC...CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGGCGGGGCTGGGGTCCTaGCCTAAGCAAATCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PCSFPPEGLACFHLDPFLAGLGS*PKQISG Trigger: CCCTGAGATTTGCTTAGGCCAGGACCCCAGCCCCGC...CAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR TCA 90 bp | TATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGCGAGCAGGAGGAGAGCTGCTCGTaGCCCATCATGAACTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YGRAPAEGLLHQAHFSEQEESCS*PIMNCK Trigger: CTTGCAGTTCATGATGGGTCACGAGCAGCTCTCCTC...CTGCTCGCTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR CCA 90 bp | GCTCAATTAAAAATTTTCACCATGGAGTCCAGCCCTGGGCTGGGAAGGGTTCTGGGCAGCCCCGTCGACTaGCTCAAGGCCAGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: AQLKIFTMESSPGLGRVLGSPVD*LKARLS Trigger: GGACAGCCTGGCCTTGAGCCAGTCGACGGGGCTGCC...CAGAACCCTTCCCAGCCCAGGGCTGGACTCCATGGTGAAAATTTTTAATTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR CCA 90 bp | TCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGCTTGTTGAACTCCAGTaGGAAGACACCTACGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGAWPLHLPCSFPPEGLALVELQ*EDTYVS Trigger: GGAGACGTAGGTGTCTTCCCACTGGAGTTCAACAAG...CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR TCA 90 bp | TTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCCAAACTGGGTCAGCATaGCCCGGGCTAGTCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: FPPEGLACFHLDPFLQRFQTGSA*PGLVSR Trigger: ACGTGAGACTAGCCCGGGTCATGCTGACCCAGTTTG...GAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR TCA 90 bp | TATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGCGAGCAGGTCCGTGGAAAGTCATaGAGTAGAGAGGCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YGRAPAEGLLHQAHFSEQVRGKS*SREAGP Trigger: AGGACCTGCCTCTCTACTTCATGACTTTCCACGGAC...CTGCTCGCTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR CCA 90 bp | TATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGCGAGCAGGGCTTTGCTCTTGGGTaGGATGGAGAAGGTAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: YGRAPAEGLLHQAHFSEQGFALG*DGEGKG Trigger: TCCCTTACCTTCTCCATCCCACCCAAGAGCAAAGCC...CTGCTCGCTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR CCA 90 bp | GCAGTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCAGGCTTTGCTCTTGGGTaGGATGGAGAAGGTAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: AVKSAPTGQALQAYSFFPGFALG*DGEGKG Trigger: TCCCTTACCTTCTCCATCCCACCCAAGAGCAAAGCC...TGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS-3UTR TCA 90 bp | GCAGTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCACTGTGGTCTTGTCAATaGAGAGGCAGAAGGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AVKSAPTGQALQAYSFFPLWSCQ*RGRRKW Trigger: CCACTTCCTTCTGCCTCTTCATTGACAAGACCACAG...TGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR TCA 90 bp | GTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGGCTAGTCTCACGTTGCTaGTCTCAAAGCTACCCCACA | + |
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Preference number: 4 (lower is better) Translates to: VKSAPTGQALQAYSFFPWLVSRC*SQSYPT Trigger: TGTGGGGTAGCTTTGAGATCAGCAACGTGAGACTAG...CCATGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
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| CDS-3UTR GCA 90 bp | TCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTCACAAAGGGACTTGGTaGTCGAAGGCAGCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGVFPSGSLSAEVHRPMSHKGTW*SKAAVA Trigger: GGCCACAGCTGCCTTCGAGCACCAAGTCCCTTTGTG...AGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR GCA 90 bp | TATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGCGAGCAGCGGACACCAGCCGCTTaGTCTACATTTGACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGRAPAEGLLHQAHFSEQRTPAA*STFDSS Trigger: AGAACTGTCAAATGTAGAGCAAGCGGCTGGTGTCCG...CTGCTCGCTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCTACAAAGCAGAGCAGAGAGGCTCGGTGCCTACCGCATCAGCCTTCGGTCCCTTCTGCTAGGCTaGTCATGCAAAGAAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LALQSRAERLGAYRISLRSLLLG*SCKESV Trigger: GACACTTTCTTTGCATGACCAGCCTAGCAGAAGGGA...CCGAAGGCTGATGCGGTAGGCACCGAGCCTCTCTGCTCTGCTTTGTAGAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCAAGTGTGTTCACTCCCTaGGTACACAAGTCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLACFHLDPFLQRFTGPSVFTP*VHKSRA Trigger: TGCCCTGGACTTGTGTACCCAGGGAGTGAACACACT...TGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTGCGGGGCTGGGGTCCTaGCCTAAGCAAATCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSAGLGS*PKQISG Trigger: CCCTGAGATTTGCTTAGGCCAGGACCCCAGCCCCGC...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGCTGCTCAATTAAAAATTTTCACCATGGAGTCCAGCCCTGGGCTGGGAAGCTGGCTGGGCGGGGCTaGGGTCCTGGCCTAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSIKNFHHGVQPWAGKLAGRG*GPGLSK Trigger: TTTGCTTAGGCCAGGACCCCAGCCCCGCCCAGCCAG...CTTCCCAGCCCAGGGCTGGACTCCATGGTGAAAATTTTTAATTGAGCAGCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTCTCATTTTTGATGTCTaGGGACACCACAAAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GPGLFICLAHSHLRVWRVLIFDV*GHHKGT Trigger: AGTCCCTTTGTGGTGTCCTCAGACATCAAAAATGAG...AACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGAAAATGGATGCTGTCTaGAGTTCCTTGTCGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQGPGLFICLAHSHLRVWKMDAV*SSLSSS Trigger: AGACGACGACAAGGAACTGCAGACAGCATCCATTTT...CCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCAGGAAGACTTAAGCCTTaGTTTAAGGCCTCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGLACFHLDPFLQRFTGPGRLKP*FKASRG Trigger: TCCCCTGGAGGCCTTAAACCAAGGCTTAAGTCTTCC...TGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR GCA 90 bp | GTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGGAATGTAGTCTTGAGCTaGAATCCTGTCAGAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSAPTGQALQAYSFFPWNVVLS*NPVRGE Trigger: CTCTCCTCTGACAGGATTGCAGCTCAAGACTACATT...CCATGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGGGATCAGAACATTGTCTaGTTCTTGGCTTGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSAPTGQALQAYSFFPWDQNIV*FLACFG Trigger: GCCAAAGCAAGCCAAGAAGCAGACAATGTTCTGATC...CCATGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTCTGTAGCTCAGGACTATATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACTTCGAGCAAACAGTTTaGCAGCTTCCCAGGATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFCSSGLYGRAPAEGLLHFEQTV*QLPRIE Trigger: TTCGATCCTGGGAAGCTGCCAAACTGTTTGCTCGAA...GTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATATAGTCCTGAGCTACAGAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTCTTGCCACTGCCTGTTaGCCCTGTAAAGACCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGVFPSGSLSAEVHRPMSLATAC*PCKDRQ Trigger: TTGACGGTCTTTACAGGGCCAACAGGCAGTGGCAAG...AGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGTGGCTGAGCCGAAAATaGATGCTGTCTGCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PCSFPPEGLACFHLDPFLWLSRK*MLSAVP Trigger: AGGAACTGCAGACAGCATCCATTTTCGGCTCAGCCA...CAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCTTGTTGAACTCCAGTaGGAAGACACCTACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSFPPEGLACFHLDPFLLVELQ*EDTYVS Trigger: GGAGACGTAGGTGTCTTCCCACTGGAGTTCAACAAG...CAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR GCA 90 bp | AGGACTATATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGTCATACTTGTCCAGTTaGTCTTCCAGCCGTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RTIWKSPSRRPAPPGSFQSYLSS*SSSRVT Trigger: TGTGACACGGCTGGAAGAGCAACTGGACAAGTATGA...CTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATATAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR TCA 90 bp | TCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGTATCTCTCCGGCTaGTCAGTGGTAATCCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SHLRVWRVSIWIPFCRGSQYLSG*SVVIQI Trigger: TATTTGGATTACCACTGATCAGCCGGAGAGATACTG...TGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTCGTCCGTGGAAAGTCATaGAGTAGAGAGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFHLDPFLQRFTGPCLVLVRGKS*SREAGP Trigger: AGGACCTGCCTCTCTACTTCATGACTTTCCACGGAC...GAGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTCGATTCTTGGACACCTaGAGATACCGTTTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSRFLDT*RYRFPG Trigger: GCCTGGGAAACGGTATCTGCAGGTGTCCAAGAATCG...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CCA 90 bp | TCACCAAAACGCTGGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGGCTCGAAGGCAGCTGTaGCCATCCTGGAAGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPKRWFFGNSLCLSSAIQARRQL*PSWKGI Trigger: GATCCCCTTCCAGGATGGCCACAGCTGCCTTCGAGC...CTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTGCTCCCAAAGAGGTATaGCTCGGTTCCAGATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSAPKEV*LGSRSS Trigger: TGAGGATCTGGAACCGAGCCATACCTCTTTGGGAGC...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | AAAACCCAAAACGAGCTGAGTCTAGCATCCTTCCCTTTGCTTCGTTCCTTTCACCAGACGATTCAGGTCTaGGAAGCGGCTCCAACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTQNELSLASFPLLRSFHQTIQV*EAAPTD Trigger: GTCCGTTGGAGCCGCTTCCCAGACCTGAATCGTCTG...GTGAAAGGAACGAAGCAAAGGGAAGGATGCTAGACTCAGCTCGTTTTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCATCAAAGCGATTCTTaGACACCTGCAGATACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCSFPPEGLACFHLDPFLHQSDS*TPADTV Trigger: AACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATG...CAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTCTGTAGCTCAGGACTATATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCCTTTTTCTCATTTTTaGTGTCTGAGGACACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GFCSSGLYGRAPAEGLLHPFSHF*CLRTPQ Trigger: TTGTGGTGTCCTCAGACATCAAAAATGAGAAAAAGG...GTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATATAGTCCTGAGCTACAGAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCTTCCATCTTTGAAGCCCTAAGAGTACAGGATCAGCACCTCAGATCAATTCACCACAAAGGGACTTaGTGCTCGAAGGCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AASIFEALRVQDQHLRSIHHKGT*CSKAAV Trigger: CACAGCTGCCTTCGAGCACCAAGTCCCTTTGTGGTG...AATTGATCTGAGGTGCTGATCCTGTACTCTTAGGGCTTCAAAGATGGAAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | ACCAAAACGCTGGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGAAAGGGGACGAGGCTGTTaGTTCCCAGGCCTCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKTLVLWKQPLSFQCYTERGRGC*FPGLTR Trigger: TCTGGTGAGGCCTGGGAACCAACAGCCTCGTCCCCT...TTCTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | GGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTCATCAAAGCGATTCTTaGACACCTGCAGATACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVFPSGSLSAEVHRPMSSHQSDS*TPADTV Trigger: AACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATG...ACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTTCCATCTTTGAAGCCCTAAGAGTACAGGATCAGCACCTCAGATCAATTCGATTCTTGGACACCTaGAGATACCGTTTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AASIFEALRVQDQHLRSIRFLDT*RYRFPG Trigger: GCCTGGGAAACGGTATCTGCAGGTGTCCAAGAATCG...AATTGATCTGAGGTGCTGATCCTGTACTCTTAGGGCTTCAAAGATGGAAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTAGAGGCAGAAGGAAGTaGGAGCGTCCTTTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSRGRRK*ERPFSH Trigger: ATGAGAAAAAGGACGCTCCCACTTCCTTCTGCCTCT...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CCA 90 bp | ACCAAAACGCTGGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGAACGTGTCACAGCAAACTaGGTCAGCATGACCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKTLVLWKQPLSFQCYTERVTAN*VSMTRA Trigger: AGCCCGGGTCATGCTGACCCAGTTTGCTGTGACACG...TTCTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR GCA 90 bp | GCAGCTTCCATCTTTGAAGCCCTAAGAGTACAGGATCAGCACCTCAGATCAATTCTGCTAGGCTGGTCATaGAAAGAAAGTGTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AASIFEALRVQDQHLRSILLGWS*KESVLW Trigger: CCACAGGACACTTTCTTTGCATGACCAGCCTAGCAG...AATTGATCTGAGGTGCTGATCCTGTACTCTTAGGGCTTCAAAGATGGAAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR GCA 90 bp | AGTAGCTGCTCAATTAAAAATTTTCACCATGGAGTCCAGCCCTGGGCTGGGAAGAAAATGGATGCTGTCTaGAGTTCCTTGTCGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSCSIKNFHHGVQPWAGKKMDAV*SSLSSS Trigger: AGACGACGACAAGGAACTGCAGACAGCATCCATTTT...CTTCCCAGCCCAGGGCTGGACTCCATGGTGAAAATTTTTAATTGAGCAGCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR GCA 90 bp | TCACCAAAACGCTGGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGTCATACTTGTCCAGTTaGTCTTCCAGCCGTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPKRWFFGNSLCLSSAIQSYLSS*SSSRVT Trigger: TGTGACACGGCTGGAAGAGCAACTGGACAAGTATGA...CTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR GCA 90 bp | AAAACCCAAAACGAGCTGAGTCTAGCATCCTTCCCTTTGCTTCGTTCCTTTCACGATCAGAACATTGTCTaGTTCTTGGCTTGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTQNELSLASFPLLRSFHDQNIV*FLACFG Trigger: GCCAAAGCAAGCCAAGAAGCAGACAATGTTCTGATC...GTGAAAGGAACGAAGCAAAGGGAAGGATGCTAGACTCAGCTCGTTTTGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR GCA 90 bp | TCACCAAAACGCTGGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGAATGTAGTCTTGAGCTaGAATCCTGTCAGAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPKRWFFGNSLCLSSAIQNVVLS*NPVRGE Trigger: CTCTCCTCTGACAGGATTGCAGCTCAAGACTACATT...CTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CCA 90 bp | TCACCAAAACGCTGGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGTGTGCACGTAAATACTaGCGGATTTCAGTCGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPKRWFFGNSLCLSSAIQCARKY*RISVVV Trigger: GACTACGACTGAAATCCGCCAGTATTTACGTGCACA...CTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| 3UTR CAA 72 bp | CCTTTGCTTCGTTCCTTTCACCAAAACGCTGGTTCTTaGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLRSFHQNAGS*ETAFVFPVLYR Trigger: TCTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGAAAGGAACGAAGCAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CCA 90 bp | CAGACTGTCCCTCGGGGTAGGGAAAGGGTTGGCAGCCCCGTCGACTaGCTCAAGGCCAGGCTGTCCAGTTCACGACTTGTCACAACCACC | + |
|
Preference number: 5 (lower is better) Translates to: QTVPRGRERVGSPVD*LKARLSSSRLVTTT Trigger: GGTGGTTGTGACAAGTCGTGAACTGGACAGCCTGGCCTTGAGCCAGTCGACGGGGCTGCCAACCCTTTCCCTACCCCGAGGGACAGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS GCA 90 bp | AGGACACCCTCTTTGGCCCCATCCCCTCGTCCCTCCACACTGGCCTaGAAGTCTTCCCAGCTCCCTTCTGCTAGGCTGGTCATGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTPSLAPSPRPSTLA*KSSQLPSARLVMQR Trigger: TCTTTGCATGACCAGCCTAGCAGAAGGGAGCTGGGAAGACTTGCAGGCCAGTGTGGAGGGACGAGGGGATGGGGCCAAAGAGGGTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGCGGGCTAGTCTCACGTaGCTGATCTCAAAGCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: SGAWPLHLPCSFPPEGLARASLT*LISKLP Trigger: GGGTAGCTTTGAGATCAGCAACGTGAGACTAGCCCG...CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 90 bp | CAGGCAGGTAGGGCGGTACGAAGAATACGGGGAAGACTTAAGCCTTaGTTTAAGGCCTCCAGGGGACGAGGCTGTTGGTTCCCAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QAGRAVRRIRGRLKP*FKASRGRGCWFPGL Trigger: GAGGCCTGGGAACCAACAGCCTCGTCCCCTGGAGGCCTTAAACCAAGGCTTAAGTCTTCCCCGTATTCTTCGTACCGCCCTACCTGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTGGGGTAGGGAAAGGGTaGGCAGCCCCGTCGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSGVGKG*AAPSTG Trigger: GCCAGTCGACGGGGCTGCCAACCCTTTCCCTACCCC...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGTTCATACTTGTCCAGTaGCTCTTCCAGCCGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGAWPLHLPCSFPPEGLAFILVQ*LFQPCH Trigger: GTGACACGGCTGGAAGAGCAACTGGACAAGTATGAA...CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGCCATCAAAGCGATTCTaGGACACCTGCAGATACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SGAWPLHLPCSFPPEGLAPSKRF*DTCRYR Trigger: ACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATGG...CGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS TCA 90 bp | CAGCCCCTAGTAGCTTCAGGCCACGTAATCCTGAGCTCCCAGGGGTaGACCAAGGGAAGACCAGACTTCGAGCAGATCGAAGATAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPLVASGHVILSSQG*TKGRPDFEQIEDSG Trigger: TCCGCTATCTTCGATCTGCTCGAAGTCTGGTCTTCCCTTGGTTCACCCCTGGGAGCTCAGGATTACGTGGCCTGAAGCTACTAGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS GCA 90 bp | GGCAGGTCCTCAAAACGGTCTGCCCACTCTTCATACTTGTCCAGTTaGTCTTCCAGCCGTGTCACAGCAAACTGGGTCAGCATGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRSSKRSAHSSYLSS*SSSRVTANWVSMTR Trigger: CCGGGTCATGCTGACCCAGTTTGCTGTGACACGGCTGGAAGAGCAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGAGGACCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 90 bp | ATGTCTGAGGACACCACAAAGGGACTTGGTGCTCGAAGGCAGCTGTaGCCATCCTGGAAGGGGATCCCATGTGCACGTAAATACTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: MSEDTTKGLGARRQL*PSWKGIPCARKYWR Trigger: CCGCCAGTATTTACGTGCACATGGGATCCCCTTCCAGGATGGCCACAGCTGCCTTCGAGCACCAAGTCCCTTTGTGGTGTCCTCAGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | GGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTGTCACGTGGCAACTGTaGTCTGTAGCAAACTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GPGLFICLAHSHLRVWRVVTWQL*SVANFR Trigger: TCGGAAGTTTGCTACAGACAACAGTTGCCACGTGAC...AACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS TCA 90 bp | GAGGCTGTTGGTTCCCAGGCCTCACCAGAGAGCATCGCTTGGGGTTaGGTTTTCGAGCAAACAGTTTGGCAGCTTCCCAGGATCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EAVGSQASPESIAWG*VFEQTVWQLPRIEG Trigger: ACCTTCGATCCTGGGAAGCTGCCAAACTGTTTGCTCGAAAACTCAACCCCAAGCGATGCTCTCTGGTGAGGCCTGGGAACCAACAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS GCA 90 bp | AGACGATTCAGGTCTGGGAAGCGGCTCCAACGGACACCAGCCGCTTaGTCTACATTTGACAGTTCTCCTAAAACCTCCTCTCGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRFRSGKRLQRTPAA*STFDSSPKTSSRSC Trigger: GCAGCTCCGAGAGGAGGTTTTAGGAGAACTGTCAAATGTAGAGCAAGCGGCTGGTGTCCGTTGGAGCCGCTTCCCAGACCTGAATCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 90 bp | CAGCTGTGGCCATCCTGGAAGGGGATCCCATGTGCACGTAAATACTaGCGGATTTCAGTCGTAGTCACCGGCGACACTGGCATCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QLWPSWKGIPCARKY*RISVVVTGDTGISK Trigger: CTTAGAGATGCCAGTGTCGCCGGTGACTACGACTGAAATCCGCCAGTATTTACGTGCACATGGGATCCCCTTCCAGGATGGCCACAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 90 bp | GTGTCATCTGTCACCTTGGTAAGGCCAAACATCACACGAGCTAGCTaGGCTTCCTCAGGGTCTGGAAGCTCCCAAAGAGGTATGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSVTLVRPNITRAS*ASSGSGSSQRGMAR Trigger: CCGAGCCATACCTCTTTGGGAGCTTCCAGACCCTGAGGAAGCCCAGCTAGCTCGTGTGATGTTTGGCCTTACCAAGGTGACAGATGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 90 bp | GGAAGACTTAAGCCTTGGTTTAAGGCCTCCAGGGGACGAGGCTGTTaGTTCCCAGGCCTCACCAGAGAGCATCGCTTGGGGTTGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRLKPWFKASRGRGC*FPGLTREHRLGLSF Trigger: AAAACTCAACCCCAAGCGATGCTCTCTGGTGAGGCCTGGGAACCAACAGCCTCGTCCCCTGGAGGCCTTAAACCAAGGCTTAAGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCCTTTGCTTCGTTCCTTTCACCAAAACGCTGGTTCTTTGGAAACAGCCCAGGGGACGAGGCTGTaGGTTCCCAGGCCTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFPLLRSFHQNAGSLETAQGTRL*VPRPHQ Trigger: CTGGTGAGGCCTGGGAACCAACAGCCTCGTCCCCTG...GGCTGTTTCCAAAGAACCAGCGTTTTGGTGAAAGGAACGAAGCAAAGGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | TATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGCGAGCAGGGACCTGATGCTCTGTaGTCCGTGGAAAGTCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: YGRAPAEGLLHQAHFSEQGPDAL*SVESHE Trigger: TTCATGACTTTCCACGGACAACAGAGCATCAGGTCC...CTGCTCGCTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGGGGACCTGATGCTCTGTaGTCCGTGGAAAGTCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: VKSAPTGQALQAYSFFPWGPDAL*SVESHE Trigger: TTCATGACTTTCCACGGACAACAGAGCATCAGGTCC...CCATGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | TATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGCGAGCAGAGTCCATTGTCGTCCTaGATCTTCTTGAGTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YGRAPAEGLLHQAHFSEQSPLSS*IFLSRA Trigger: AGCCCGACTCAAGAAGATCAAGGACGACAATGGACT...CTGCTCGCTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGTTGGCCACTAGTCCATaGTCGTCCTTGATCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGPGLFICLAHSHLRVWLATSP*SSLIFL Trigger: CAAGAAGATCAAGGACGACAATGGACTAGTGGCCAA...CCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCTACAAAGCAGAGCAGAGAGGCTCGGTGCCTACCGCATCAGCCTTCGGCCAGAAGAGGATTTTTaGGCCACTAGTCCATTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LALQSRAERLGAYRISLRPEEDF*ATSPLS Trigger: CGACAATGGACTAGTGGCCAAAAAATCCTCTTCTGG...CCGAAGGCTGATGCGGTAGGCACCGAGCCTCTCTGCTCTGCTTTGTAGAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTCCGCTTGCTCTACATTaGACAGTTCTCCTAAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: GPGLFICLAHSHLRVWRVPLALH*TVLLKP Trigger: AGGTTTTAGGAGAACTGTCAAATGTAGAGCAAGCGG...AACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS TCA 90 bp | GAGGCAGAAGGAAGTGGGAGCGTCCTTTTTCTCATTTTTGATGTCTaGGGACACCACAAAGGGACTTGGTGCTCGAAGGCAGCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAEGSGSVLFLIFDV*GHHKGTWCSKAAVA Trigger: GGCCACAGCTGCCTTCGAGCACCAAGTCCCTTTGTGGTGTCCTCAGACATCAAAAATGAGAAAAAGGACGCTCCCACTTCCTTCTGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | CCTTGCTCATTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGGTCACGTGGCAACTGTaGTCTGTAGCAAACTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PCSFPPEGLACFHLDPFLVTWQL*SVANFR Trigger: TCGGAAGTTTGCTACAGACAACAGTTGCCACGTGAC...CAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGGGCCTGGCCTCTTCATCTGCCTTGCTCATTCCCACCTGAGGGTCTGGTGTAAGATCAGAACATaGTCTGCTTCTTGGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQGPGLFICLAHSHLRVWCKIRT*SASWLA Trigger: AGCAAGCCAAGAAGCAGACAATGTTCTGATCTTACA...CCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCCAGGCCCCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | CAGGACTATATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCATCGTCCTTGATCTTCTaGAGTCGGGCTTTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QDYMEEPQQKACSTRLISSSLIF*SRALLL Trigger: CAAGAGCAAAGCCCGACTCAAGAAGATCAAGGACGA...TGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATATAGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS GCA 90 bp | TCCGTGGAAAGTCATGAAGTAGAGAGGCAGGTCCTCAAAACGGTCTaGCCACTCTTCATACTTGTCCAGTTGCTCTTCCAGCCGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVESHEVERQVLKTV*PLFILVQLLFQPCH Trigger: GTGACACGGCTGGAAGAGCAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGAGGACCTGCCTCTCTACTTCATGACTTTCCACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CCA 90 bp | TCTTCATACTTGTCCAGTTGCTCTTCCAGCCGTGTCACAGCAAACTaGGTCAGCATGACCCGGGCTAGTCTCACGTTGCTGATCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSYLSSCSSSRVTAN*VSMTRASLTLLISK Trigger: CTTTGAGATCAGCAACGTGAGACTAGCCCGGGTCATGCTGACCCAGTTTGCTGTGACACGGCTGGAAGAGCAACTGGACAAGTATGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | TTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCGTGTCATCTGTCACCTaGGTAAGGCCAAACATCACA | + |
|
Preference number: 5 (lower is better) Translates to: FPPEGLACFHLDPFLQRFVSSVT*VRPNIT Trigger: TGTGATGTTTGGCCTTACCAAGGTGACAGATGACAC...GAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTGCTTCTTGGCTTGCTTaGGCTGAGCCGAAAATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGVFPSGSLSAEVHRPMSASWLA*AEPKMD Trigger: ATCCATTTTCGGCTCAGCCAAAGCAAGCCAAGAAGC...AGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAAATCGGCACCCACGGGGCAGGCACTGCAGGCTTACAGCTTCTTTCCATGTAAGATCAGAACATaGTCTGCTTCTTGGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVKSAPTGQALQAYSFFPCKIRT*SASWLA Trigger: AGCAAGCCAAGAAGCAGACAATGTTCTGATCTTACA...TGGAAAGAAGCTGTAAGCCTGCAGTGCCTGCCCCGTGGGTGCCGATTTCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTAGTCCATTGTCGTCCTaGATCTTCTTGAGTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVFPSGSLSAEVHRPMSSSPLSS*IFLSRA Trigger: AGCCCGACTCAAGAAGATCAAGGACGACAATGGACT...ACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | TCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCATTGGCCACTAGTCCATaGTCGTCCTTGATCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHLRVWRVSIWIPFCRGSLATSP*SSLIFL Trigger: CAAGAAGATCAAGGACGACAATGGACTAGTGGCCAA...TGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS TCA 90 bp | TGTCCAGTTCACGACTTGTCACAACCACCTCAGTATCTCTCCGGCTaGTCAGTGGTAATCCAAATAGGTTGTGATAGACACCAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CPVHDLSQPPQYLSG*SVVIQIGCDRHQAG Trigger: CCCGGCCTGGTGTCTATCACAACCTATTTGGATTACCACTGATCAGCCGGAGAGATACTGAGGTGGTTGTGACAAGTCGTGAACTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS GCA 90 bp | GCTTGCTCTACATTTGACAGTTCTCCTAAAACCTCCTCTCGGAGCTaGCGAAAAGACACAATAGACTTGTGCCAGGCAGGTAGGGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ACSTFDSSPKTSSRS*RKDTIDLCQAGRAV Trigger: TACCGCCCTACCTGCCTGGCACAAGTCTATTGTGTCTTTTCGGCAGCTCCGAGAGGAGGTTTTAGGAGAACTGTCAAATGTAGAGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 90 bp | TCAGTGGTAATCCAAATAGGTTGTGATAGACACCAGGCCGGGGGATaGTGGTCTCTACATACTGTACTCCATTTTCCTGACCCTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVVIQIGCDRHQAGG*WSLHTVLHFPDPQP Trigger: GGGCTGAGGGTCAGGAAAATGGAGTACAGTATGTAGAGACCACCATCCCCCGGCCTGGTGTCTATCACAACCTATTTGGATTACCACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTAAAGACACAATAGACTaGTGCCAGGCAGGTAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSKDTID*CQAGRA Trigger: CGCCCTACCTGCCTGGCACAAGTCTATTGTGTCTTT...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | TGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTCCTGATGAATGTTGTCTaGCCACTGCCTGTTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CFHLDPFLQRFTGPCLVLLMNVV*PLPVGP Trigger: AGGGCCAACAGGCAGTGGCAAGACAACATTCATCAG...GAGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTGCTGTCTGCAGTTCCTaGTCGTCGTCTTCTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSAVCSS*SSSSFR Trigger: TCGGAAAGAAGACGACGACAAGGAACTGCAGACAGC...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTCGCTGTCTGCAGTTCCTaGTCGTCGTCTTCTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CFHLDPFLQRFTGPCLVLAVCSS*SSSSFR Trigger: TCGGAAAGAAGACGACGACAAGGAACTGCAGACAGC...GAGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCACCTGAGGGTCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCAAGGTAAGGGAATTCTaGTTGAACTCCAGTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPPEGLACFHLDPFLQRFKVREF*LNSSGK Trigger: CTTCCCACTGGAGTTCAACAAGAATTCCCTTACCTT...GAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGACCCTCAGGTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | AGGACTATATGGAAGAGCCCCAGCAGAAGGCCTGCTCCACCAGGCTCATTTCAGAAGGTAAGGGAATTCTaGTTGAACTCCAGTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RTIWKSPSRRPAPPGSFQKVREF*LNSSGK Trigger: CTTCCCACTGGAGTTCAACAAGAATTCCCTTACCTT...CTGAAATGAGCCTGGTGGAGCAGGCCTTCTGCTGGGGCTCTTCCATATAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTCCAGAAGAGGATTTTTaGGCCACTAGTCCATTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGVFPSGSLSAEVHRPMSPEEDF*ATSPLS Trigger: CGACAATGGACTAGTGGCCAAAAAATCCTCTTCTGG...AGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS TCA 90 bp | ATGGATGCTGTCTGCAGTTCCTTGTCGTCGTCTTCTTTCCGAGGGTaGATGACCAGAGTCACGTGGCAACTGTTGTCTGTAGCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: MDAVCSSLSSSSFRG*MTRVTWQLLSVANF Trigger: GAAGTTTGCTACAGACAACAGTTGCCACGTGACTCTGGTCATTCACCCTCGGAAAGAAGACGACGACAAGGAACTGCAGACAGCATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTTTCATACTTGTCCAGTaGCTCTTCCAGCCGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSFILVQ*LFQPCH Trigger: GTGACACGGCTGGAAGAGCAACTGGACAAGTATGAA...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CCA 90 bp | TCCATTGTCGTCCTTGATCTTCTTGAGTCGGGCTTTGCTCTTGGGTaGGATGGAGAAGGTAAGGGAATTCTTGTTGAACTCCAGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIVVLDLLESGFALG*DGEGKGILVELQWE Trigger: TTCCCACTGGAGTTCAACAAGAATTCCCTTACCTTCTCCATCCCACCCAAGAGCAAAGCCCGACTCAAGAAGATCAAGGACGACAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCTAAGTGTCCTGTGGTCTaGTCAATGAAGAGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFPSGSLSAEVHRPMSSSKCPVV*SMKRQK Trigger: CTTCTGCCTCTTCATTGACAAGACCACAGGACACTT...AGAACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTGCTCAATTAAAAATTTTCACCATGGAGTCCAGCCCTGGGCTGGGAAGGCTTCTTGGCTTGCTTaGGCTGAGCCGAAAATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSCSIKNFHHGVQPWAGKASWLA*AEPKMD Trigger: ATCCATTTTCGGCTCAGCCAAAGCAAGCCAAGAAGC...CTTCCCAGCCCAGGGCTGGACTCCATGGTGAAAATTTTTAATTGAGCAGCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | GGCGTGTTTCCATCTGGATCCCTTTCTGCAGAGGTTCACAGGCCCATGTCTAGTTCCTTTTTCTCATTTTaGATGTCTGAGGACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVFPSGSLSAEVHRPMSSSFFSF*MSEDTT Trigger: TGTGGTGTCCTCAGACATCAAAAATGAGAAAAAGGA...ACTAGACATGGGCCTGTGAACCTCTGCAGAAAGGGATCCAGATGGAAACACGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS-3UTR CAA 90 bp | AAAACCCAAAACGAGCTGAGTCTAGCATCCTTCCCTTTGCTTCGTTCCTTTCACCCATCAAAGCGATTCTaGGACACCTGCAGATACCGT | + |
|
Preference number: 5 (lower is better) Translates to: KTQNELSLASFPLLRSFHPSKRF*DTCRYR Trigger: ACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATGG...GTGAAAGGAACGAAGCAAAGGGAAGGATGCTAGACTCAGCTCGTTTTGGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS-3UTR CAA 90 bp | TCACCAAAACGCTGGTTCTTTGGAAACAGCCTTTGTCTTTCCAGTGCTATACAGTCGTCCTTGATCTTCTaGAGTCGGGCTTTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPKRWFFGNSLCLSSAIQSSLIF*SRALLL Trigger: CAAGAGCAAAGCCCGACTCAAGAAGATCAAGGACGA...CTGTATAGCACTGGAAAGACAAAGGCTGTTTCCAAAGAACCAGCGTTTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CCA 72 bp | CACCCTCTTTGGCCCCATCCCCTCGTCCCTCCACACTaGCCTGCAAGTCTTCCCAGCTCCCTTCTGCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HPLWPHPLVPPH*PASLPSSLLLG Trigger: GCCTAGCAGAAGGGAGCTGGGAAGACTTGCAGGCCAGTGTGGAGGGACGAGGGGATGGGGCCAAAGAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | CCTCGGGGTAGGGAAAGGGTTGGCAGCCCCGTCGACTaGCTCAAGGCCAGGCTGTCCAGTTCACGACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRGRERVGSPVD*LKARLSSSRLV Trigger: GACAAGTCGTGAACTGGACAGCCTGGCCTTGAGCCAGTCGACGGGGCTGCCAACCCTTTCCCTACCCCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | GACTTGGAGGTATCTGGCTGGGCGGGGCTGGGGTCCTaGCCTAAGCAAATCTCAGGGTTCTGGTGCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DLEVSGWAGLGS*PKQISGFWCAA Trigger: GGCTGCGCACCAGAACCCTGAGATTTGCTTAGGCCAGGACCCCAGCCCCGCCCAGCCAGATACCTCCAAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CCA 72 bp | GCCCTTCCGATGTCCCTTCAGCAGACGATTCAGGTCTaGGAAGCGGCTCCAACGGACACCAGCCGCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALPMSLQQTIQV*EAAPTDTSRLL Trigger: GAGCAAGCGGCTGGTGTCCGTTGGAGCCGCTTCCCAGACCTGAATCGTCTGCTGAAGGGACATCGGAAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | AAGCCTTGGTTTAAGGCCTCCAGGGGACGAGGCTGTTaGTTCCCAGGCCTCACCAGAGAGCATCGCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KPWFKASRGRGC*FPGLTREHRLG Trigger: CCCCAAGCGATGCTCTCTGGTGAGGCCTGGGAACCAACAGCCTCGTCCCCTGGAGGCCTTAAACCAAGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | ACCCTGAGGACTTGGAGGTATCTGGCTGGGCGGGGCTaGGGTCCTGGCCTAAGCAAATCTCAGGGTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TLRTWRYLAGRG*GPGLSKSQGSG Trigger: ACCAGAACCCTGAGATTTGCTTAGGCCAGGACCCCAGCCCCGCCCAGCCAGATACCTCCAAGTCCTCAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 90 bp | CGAGGCTGTTGGTTCCCAGGCCTCACCAGAGAGCATCGCTTGGGGTaGAGTTTTCGAGCAAACAGTTTGGCAGCTTCCCAGGATCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RGCWFPGLTREHRLG*SFRANSLAASQDRR Trigger: CCTTCGATCCTGGGAAGCTGCCAAACTGTTTGCTCGAAAACTCAACCCCAAGCGATGCTCTCTGGTGAGGCCTGGGAACCAACAGCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS TCA 72 bp | GGTTCCCAGGCCTCACCAGAGAGCATCGCTTGGGGTTaGGTTTTCGAGCAAACAGTTTGGCAGCTTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSQASPESIAWG*VFEQTVWQLPR Trigger: CCTGGGAAGCTGCCAAACTGTTTGCTCGAAAACTCAACCCCAAGCGATGCTCTCTGGTGAGGCCTGGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | CCATCCTGGAAGGGGATCCCATGTGCACGTAAATACTaGCGGATTTCAGTCGTAGTCACCGGCGACACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSWKGIPCARKY*RISVVVTGDTG Trigger: GCCAGTGTCGCCGGTGACTACGACTGAAATCCGCCAGTATTTACGTGCACATGGGATCCCCTTCCAGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | GACACCACAAAGGGACTTGGTGCTCGAAGGCAGCTGTaGCCATCCTGGAAGGGGATCCCATGTGCACGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DTTKGLGARRQL*PSWKGIPCARK Trigger: TTTACGTGCACATGGGATCCCCTTCCAGGATGGCCACAGCTGCCTTCGAGCACCAAGTCCCTTTGTGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | TTGTCCAGTTGCTCTTCCAGCCGTGTCACAGCAAACTaGGTCAGCATGACCCGGGCTAGTCTCACGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSCSSSRVTAN*VSMTRASLTLL Trigger: CAGCAACGTGAGACTAGCCCGGGTCATGCTGACCCAGTTTGCTGTGACACGGCTGGAAGAGCAACTGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | AGCGGCTCCAACGGACACCAGCCGCTTGCTCTACATTaGACAGTTCTCCTAAAACCTCCTCTCGGAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSNGHQPLALH*TVLLKPPLGAA Trigger: GGCAGCTCCGAGAGGAGGTTTTAGGAGAACTGTCAAATGTAGAGCAAGCGGCTGGTGTCCGTTGGAGCCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 90 bp | GGTCTGGGAAGCGGCTCCAACGGACACCAGCCGCTTGCTCTACATTaGACAGTTCTCCTAAAACCTCCTCTCGGAGCTGCCGAAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: GLGSGSNGHQPLALH*TVLLKPPLGAAEKT Trigger: TGTCTTTTCGGCAGCTCCGAGAGGAGGTTTTAGGAGAACTGTCAAATGTAGAGCAAGCGGCTGGTGTCCGTTGGAGCCGCTTCCCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 90 bp | CGTGTCACAGCAAACTGGGTCAGCATGACCCGGGCTAGTCTCACGTaGCTGATCTCAAAGCTACCCCACAGTGTGTTCACTCCCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RVTANWVSMTRASLT*LISKLPHSVFTPWV Trigger: TACCCAGGGAGTGAACACACTGTGGGGTAGCTTTGAGATCAGCAACGTGAGACTAGCCCGGGTCATGCTGACCCAGTTTGCTGTGACACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 90 bp | AGGCAGGTCCTCAAAACGGTCTGCCCACTCTTCATACTTGTCCAGTaGCTCTTCCAGCCGTGTCACAGCAAACTGGGTCAGCATGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: RQVLKTVCPLFILVQ*LFQPCHSKLGQHDP Trigger: CGGGTCATGCTGACCCAGTTTGCTGTGACACGGCTGGAAGAGCAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGAGGACCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS GCA 72 bp | TCCTCTCGGAGCTGCCGAAAAGACACAATAGACTTGTaGCAGGCAGGTAGGGCGGTACGAAGAATACGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSRSCRKDTIDL*QAGRAVRRIRG Trigger: TCCCCGTATTCTTCGTACCGCCCTACCTGCCTGGCACAAGTCTATTGTGTCTTTTCGGCAGCTCCGAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | GTCACCTTGGTAAGGCCAAACATCACACGAGCTAGCTaGGCTTCCTCAGGGTCTGGAAGCTCCCAAAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VTLVRPNITRAS*ASSGSGSSQRG Trigger: ACCTCTTTGGGAGCTTCCAGACCCTGAGGAAGCCCAGCTAGCTCGTGTGATGTTTGGCCTTACCAAGGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | AGGGCGGTACGAAGAATACGGGGAAGACTTAAGCCTTaGTTTAAGGCCTCCAGGGGACGAGGCTGTTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAVRRIRGRLKP*FKASRGRGCWF Trigger: GAACCAACAGCCTCGTCCCCTGGAGGCCTTAAACCAAGGCTTAAGTCTTCCCCGTATTCTTCGTACCGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | TGGTTCCCAGGCCTCACCAGAGAGCATCGCTTGGGGTaGAGTTTTCGAGCAAACAGTTTGGCAGCTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WFPGLTREHRLG*SFRANSLAASQ Trigger: CTGGGAAGCTGCCAAACTGTTTGCTCGAAAACTCAACCCCAAGCGATGCTCTCTGGTGAGGCCTGGGAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | GGCTGTTGGTTCCCAGGCCTCACCAGAGAGCATCGCTaGGGGTTGAGTTTTCGAGCAAACAGTTTGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCWFPGLTREHR*GLSFRANSLAA Trigger: AGCTGCCAAACTGTTTGCTCGAAAACTCAACCCCAAGCGATGCTCTCTGGTGAGGCCTGGGAACCAACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 90 bp | CCCTGGGTACACAAGTCCAGGGCATACTCACTGATGAATGTTGTCTaGCCACTGCCTGTTGGCCCTGTAAAGACCGTCAACTCGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PWVHKSRAYSLMNVV*PLPVGPVKTVNSPF Trigger: GAAGGGCGAGTTGACGGTCTTTACAGGGCCAACAGGCAGTGGCAAGACAACATTCATCAGTGAGTATGCCCTGGACTTGTGTACCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS GCA 72 bp | AGGTCTGGGAAGCGGCTCCAACGGACACCAGCCGCTTaGTCTACATTTGACAGTTCTCCTAAAACCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSGKRLQRTPAA*STFDSSPKTSS Trigger: AGAGGAGGTTTTAGGAGAACTGTCAAATGTAGAGCAAGCGGCTGGTGTCCGTTGGAGCCGCTTCCCAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | GTGGGAAGACACCTACGTCTCCATCAAAGCGATTCTTaGACACCTGCAGATACCGTTTCCCAGGCCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VGRHLRLHQSDS*TPADTVSQAQS Trigger: TGACTGGGCCTGGGAAACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATGGAGACGTAGGTGTCTTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 72 bp | CGGACACTGAATCGCCTGAGTGTGTCATCTGTCACCTaGGTAAGGCCAAACATCACACGAGCTAGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTLNRLSVSSVT*VRPNITRASWA Trigger: AGCCCAGCTAGCTCGTGTGATGTTTGGCCTTACCAAGGTGACAGATGACACACTCAGGCGATTCAGTGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | GCAAACTGGGTCAGCATGACCCGGGCTAGTCTCACGTaGCTGATCTCAAAGCTACCCCACAGTGTGTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ANWVSMTRASLT*LISKLPHSVFT Trigger: AGTGAACACACTGTGGGGTAGCTTTGAGATCAGCAACGTGAGACTAGCCCGGGTCATGCTGACCCAGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | GGCAGGTCCTCAAAACGGTCTGCCCACTCTTCATACTaGTCCAGTTGCTCTTCCAGCCGTGTCACAGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRSSKRSAHSSY*SSCSSSRVTAN Trigger: GTTTGCTGTGACACGGCTGGAAGAGCAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGAGGACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 72 bp | AGTGGGAAGACACCTACGTCTCCATCAAAGCGATTCTaGGACACCTGCAGATACCGTTTCCCAGGCCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGKTPTSPSKRF*DTCRYRFPGPV Trigger: GACTGGGCCTGGGAAACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATGGAGACGTAGGTGTCTTCCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS GCA 72 bp | TCAAAACGGTCTGCCCACTCTTCATACTTGTCCAGTTaGTCTTCCAGCCGTGTCACAGCAAACTGGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKRSAHSSYLSS*SSSRVTANWVS Trigger: GCTGACCCAGTTTGCTGTGACACGGCTGGAAGAGCAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS GCA 72 bp | ACACCTACGTCTCCATCAAAGCGATTCTTGGACACCTaGAGATACCGTTTCCCAGGCCCAGTCACCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TPTSPSKRFLDT*RYRFPGPVTSF Trigger: GAAACTGGTGACTGGGCCTGGGAAACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATGGAGACGTAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 72 bp | GCTAGGCTGGTCATGCAAAGAAAGTGTCCTGTGGTCTaGTCAATGAAGAGGCAGAAGGAAGTGGGAGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARLVMQRKCPVV*SMKRQKEVGAS Trigger: GGACGCTCCCACTTCCTTCTGCCTCTTCATTGACAAGACCACAGGACACTTTCTTTGCATGACCAGCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | CTCAAAACGGTCTGCCCACTCTTCATACTTGTCCAGTaGCTCTTCCAGCCGTGTCACAGCAAACTGGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LKTVCPLFILVQ*LFQPCHSKLGQ Trigger: CTGACCCAGTTTGCTGTGACACGGCTGGAAGAGCAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 90 bp | TTGAACTCCAGTGGGAAGACACCTACGTCTCCATCAAAGCGATTCTaGGACACCTGCAGATACCGTTTCCCAGGCCCAGTCACCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LNSSGKTPTSPSKRF*DTCRYRFPGPVTSF Trigger: GAAACTGGTGACTGGGCCTGGGAAACGGTATCTGCAGGTGTCCAAGAATCGCTTTGATGGAGACGTAGGTGTCTTCCCACTGGAGTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 90 bp | CTCACCAGAGAGCATCGCTTGGGGTTGAGTTTTCGAGCAAACAGTTaGGCAGCTTCCCAGGATCGAAGGTCATCTCCTAACCAGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: LTREHRLGLSFRANS*AASQDRRSSPNQNT Trigger: TGTGTTCTGGTTAGGAGATGACCTTCGATCCTGGGAAGCTGCCAAACTGTTTGCTCGAAAACTCAACCCCAAGCGATGCTCTCTGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS TCA 72 bp | GTCTGCAGTTCCTTGTCGTCGTCTTCTTTCCGAGGGTaGATGACCAGAGTCACGTGGCAACTGTTGTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VCSSLSSSSFRG*MTRVTWQLLSV Trigger: TACAGACAACAGTTGCCACGTGACTCTGGTCATTCACCCTCGGAAAGAAGACGACGACAAGGAACTGCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 90 bp | CTCCCTTCTGCTAGGCTGGTCATGCAAAGAAAGTGTCCTGTGGTCTaGTCAATGAAGAGGCAGAAGGAAGTGGGAGCGTCCTTTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPSARLVMQRKCPVV*SMKRQKEVGASFFS Trigger: TGAGAAAAAGGACGCTCCCACTTCCTTCTGCCTCTTCATTGACAAGACCACAGGACACTTTCTTTGCATGACCAGCCTAGCAGAAGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS TCA 72 bp | GGAAGTGGGAGCGTCCTTTTTCTCATTTTTGATGTCTaGGGACACCACAAAGGGACTTGGTGCTCGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSGSVLFLIFDV*GHHKGTWCSKA Trigger: TGCCTTCGAGCACCAAGTCCCTTTGTGGTGTCCTCAGACATCAAAAATGAGAAAAAGGACGCTCCCACTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS GCA 72 bp | AGTCATGAAGTAGAGAGGCAGGTCCTCAAAACGGTCTaGCCACTCTTCATACTTGTCCAGTTGCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHEVERQVLKTV*PLFILVQLLFQ Trigger: CTGGAAGAGCAACTGGACAAGTATGAAGAGTGGGCAGACCGTTTTGAGGACCTGCCTCTCTACTTCATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CCA 72 bp | CAAATAGGTTGTGATAGACACCAGGCCGGGGGATGGTaGTCTCTACATACTGTACTCCATTTTCCTGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: QIGCDRHQAGGW*SLHTVLHFPDP Trigger: AGGGTCAGGAAAATGGAGTACAGTATGTAGAGACCACCATCCCCCGGCCTGGTGTCTATCACAACCTATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | CTGATCTCAAAGCTACCCCACAGTGTGTTCACTCCCTaGGTACACAAGTCCAGGGCATACTCACTGATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LISKLPHSVFTP*VHKSRAYSLMN Trigger: ATTCATCAGTGAGTATGCCCTGGACTTGTGTACCCAGGGAGTGAACACACTGTGGGGTAGCTTTGAGATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | TGTCTGCTTCTTGGCTTGCTTTGGCTGAGCCGAAAATaGATGCTGTCTGCAGTTCCTTGTCGTCGTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CLLLGLLWLSRK*MLSAVPCRRLL Trigger: AAGAAGACGACGACAAGGAACTGCAGACAGCATCCATTTTCGGCTCAGCCAAAGCAAGCCAAGAAGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 72 bp | TGTAGCAAACTTCCGAAAGGCTCCAACAATGTAGTCTaGAGCTGCAATCCTGTCAGAGGAGAGCTGCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSKLPKGSNNVV*SCNPVRGELLV Trigger: CACGAGCAGCTCTCCTCTGACAGGATTGCAGCTCAAGACTACATTGTTGGAGCCTTTCGGAAGTTTGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 90 bp | TCAATGAAGAGGCAGAAGGAAGTGGGAGCGTCCTTTTTCTCATTTTaGATGTCTGAGGACACCACAAAGGGACTTGGTGCTCGAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SMKRQKEVGASFFSF*MSEDTTKGLGARRQ Trigger: CTGCCTTCGAGCACCAAGTCCCTTTGTGGTGTCCTCAGACATCAAAAATGAGAAAAAGGACGCTCCCACTTCCTTCTGCCTCTTCATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 90 bp | TTCCCAGGCCCAGTCACCAGTTTCCTATCCTGTAAGATCAGAACATaGTCTGCTTCTTGGCTTGCTTTGGCTGAGCCGAAAATGGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: FPGPVTSFLSCKIRT*SASWLALAEPKMDA Trigger: AGCATCCATTTTCGGCTCAGCCAAAGCAAGCCAAGAAGCAGACAATGTTCTGATCTTACAGGATAGGAAACTGGTGACTGGGCCTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS GCA 72 bp | ACATTTGACAGTTCTCCTAAAACCTCCTCTCGGAGCTaGCGAAAAGACACAATAGACTTGTGCCAGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TFDSSPKTSSRS*RKDTIDLCQAG Trigger: ACCTGCCTGGCACAAGTCTATTGTGTCTTTTCGGCAGCTCCGAGAGGAGGTTTTAGGAGAACTGTCAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CCA 72 bp | ATCCAAATAGGTTGTGATAGACACCAGGCCGGGGGATaGTGGTCTCTACATACTGTACTCCATTTTCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: IQIGCDRHQAGG*WSLHTVLHFPD Trigger: GTCAGGAAAATGGAGTACAGTATGTAGAGACCACCATCCCCCGGCCTGGTGTCTATCACAACCTATTTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | AGGCAGAAGGAAGTGGGAGCGTCCTTTTTCTCATTTTaGATGTCTGAGGACACCACAAAGGGACTTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RQKEVGASFFSF*MSEDTTKGLGA Trigger: AGCACCAAGTCCCTTTGTGGTGTCCTCAGACATCAAAAATGAGAAAAAGGACGCTCCCACTTCCTTCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 90 bp | ACTAGTCCATTGTCGTCCTTGATCTTCTTGAGTCGGGCTTTGCTCTaGGGTGGGATGGAGAAGGTAAGGGAATTCTTGTTGAACTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPLSSLIFLSRALL*GGMEKVREFLLNSS Trigger: ACTGGAGTTCAACAAGAATTCCCTTACCTTCTCCATCCCACCCAAGAGCAAAGCCCGACTCAAGAAGATCAAGGACGACAATGGACTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS CAA 90 bp | GTTGTCAATGACTACATGACAGACGTCATAGACGTAGACAGCATGTaGCATTGTGTCTATGACGGACCTGATGCTCTGTTGTCCGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVNDYMTDVIDVDSM*HCVYDGPDALLSVE Trigger: TTCCACGGACAACAGAGCATCAGGTCCGTCATAGACACAATGCAACATGCTGTCTACGTCTATGACGTCTGTCATGTAGTCATTGACAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
||
| CDS TCA 72 bp | CACGACTTGTCACAACCACCTCAGTATCTCTCCGGCTaGTCAGTGGTAATCCAAATAGGTTGTGATAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: HDLSQPPQYLSG*SVVIQIGCDRH Trigger: GTGTCTATCACAACCTATTTGGATTACCACTGATCAGCCGGAGAGATACTGAGGTGGTTGTGACAAGTCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026227.3 |
||
| CDS CAA 72 bp | GACTACATGACAGACGTCATAGACGTAGACAGCATGTaGCATTGTGTCTATGACGGACCTGATGCTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: DYMTDVIDVDSM*HCVYDGPDALL Trigger: CAACAGAGCATCAGGTCCGTCATAGACACAATGCAACATGCTGTCTACGTCTATGACGTCTGTCATGTAGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS CAA 72 bp | CCAGTCACCAGTTTCCTATCCTGTAAGATCAGAACATaGTCTGCTTCTTGGCTTGCTTTGGCTGAGCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: PVTSFLSCKIRT*SASWLALAEPK Trigger: TTTCGGCTCAGCCAAAGCAAGCCAAGAAGCAGACAATGTTCTGATCTTACAGGATAGGAAACTGGTGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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| CDS CCA 72 bp | GATGGAGAAGGTAAGGGAATTCTTGTTGAACTCCAGTaGGAAGACACCTACGTCTCCATCAAAGCGATTCTT | + |
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Preference number: 6 (lower is better) Translates to: DGEGKGILVELQ*EDTYVSIKAIL Trigger: AAGAATCGCTTTGATGGAGACGTAGGTGTCTTCCCACTGGAGTTCAACAAGAATTCCCTTACCTTCTCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026227.3 ENSMUST00000236685.2 |
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