Pregenerated sensors for TWIST2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007805Ensembl transcript IDs: ENSMUST00000007949.4, ENSMUST00000186075.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCCGTGGCCGCATCCAGTTCCGCATGCGCCTGAGATGTGCAGGTaGGTCCTGGCTTGCGGCTCCGGAGGTGGATGGCACGGCGCGGCG | + |
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Preference number: 1 (lower is better) Translates to: QPWPHPVPHAPEMCR*VLACGSGGGWHGAA Trigger: CGCCGCGCCGTGCCATCCACCTCCGGAGCCGCAAGCCAGGACCCACCTGCACATCTCAGGCGCATGCGGAACTGGATGCGGCCACGGCTG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR GCA 90 bp | GAGAGATACACTGGCCCGTCCGCCCACCCACCCGTGCGTCGTGGATaGCCACCACACGCAGCACCTACCCTGGCTTGCGGCTCCGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: ERYTGPSAHPPVRRG*PPHAAPTLACGSGG Trigger: ACCTCCGGAGCCGCAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCGGACGGGCCAGTGTATCTCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 90 bp | TCTAAGCAAGGCCTCAGGGAAGCAGAGCCTGCAGGATACTGCCCCTaGGGCTGCCTGGGGATTTGGGATGTGTCTGCTAAGCAGCGGGTG | + |
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Preference number: 1 (lower is better) Translates to: SKQGLREAEPAGYCP*GCLGIWDVSAKQRV Trigger: CACCCGCTGCTTAGCAGACACATCCCAAATCCCCAGGCAGCCCCAGGGGCAGTATCCTGCAGGCTCTGCTTCCCTGAGGCCTTGCTTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR TCA 90 bp | CGGGCATCGCATCTCCTGGCCTCCGCTGGCCTAAGGAAGACGTTTTaGCAACCGCTCCCCACAGAGTCACCCACAGATACCCATCCACCA | + |
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Preference number: 1 (lower is better) Translates to: RASHLLASAGLRKTF*QPLPTESPTDTHPP Trigger: TGGTGGATGGGTATCTGTGGGTGACTCTGTGGGGAGCGGTTGTCAAAACGTCTTCCTTAGGCCAGCGGAGGCCAGGAGATGCGATGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR GCA 90 bp | AGCTGTGCTGAGCTGCCTTCTTCCCAGGCAAGGCCCTGCTCACACTaGTTCTTCATCCACACCCACCGCACACTCAGACCTGTTACCCAG | + |
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Preference number: 1 (lower is better) Translates to: SCAELPSSQARPCSH*FFIHTHRTLRPVTQ Trigger: CTGGGTAACAGGTCTGAGTGTGCGGTGGGTGTGGATGAAGAAGCAGTGTGAGCAGGGCCTTGCCTGGGAAGAAGGCAGCTCAGCACAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 90 bp | CCGCTACATCCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTTaGGGCGACAAGGGTCTACTGCATTCTTGGCGCCCAGAGATTTGC | + |
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Preference number: 1 (lower is better) Translates to: PLHPPRPGRLRVPYF*GDKGLLHSWRPEIC Trigger: GCAAATCTCTGGGCGCCAAGAATGCAGTAGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGATGTAGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR TCA 90 bp | ACAGAAGTCACTGGCAGGAAGGCTGATGCCCATCCCCTGGGTATCTaGGGAGGATGTGAACCTGGGTCTCTGTCCCCTGCCAAACACTTG | + |
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Preference number: 1 (lower is better) Translates to: TEVTGRKADAHPLGI*GGCEPGSLSPAKHL Trigger: CAAGTGTTTGGCAGGGGACAGAGACCCAGGTTCACATCCTCCTCAGATACCCAGGGGATGGGCATCAGCCTTCCTGCCAGTGACTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR TCA 90 bp | CATGATAAACGCTCTCTGAAACACCAATCCGGTGCTCAGCTGTGCTaGGCTGCCTTCTTCCCAGGCAAGGCCCTGCTCACACTGCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: HDKRSLKHQSGAQLC*AAFFPGKALLTLLL Trigger: AAGAAGCAGTGTGAGCAGGGCCTTGCCTGGGAAGAAGGCAGCTCAGCACAGCTGAGCACCGGATTGGTGTTTCAGAGAGCGTTTATCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR TCA 90 bp | GATGTGTCTGCTAAGCAGCGGGTGCAGGACATGATAAACGCTCTCTaGAACACCAATCCGGTGCTCAGCTGTGCTGAGCTGCCTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: DVSAKQRVQDMINAL*NTNPVLSCAELPSS Trigger: GGAAGAAGGCAGCTCAGCACAGCTGAGCACCGGATTGGTGTTTCAGAGAGCGTTTATCATGTCCTGCACCCGCTGCTTAGCAGACACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 90 bp | GGCTTCCTCGAAACAGTCACGGGAGGTCTGGGGCGGGAGGGATCTTaGGTTCTTGTTCTGAGAGCCTTGGTCCAGTTTAAACAGGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: GFLETVTGGLGREGS*VLVLRALVQFKQVL Trigger: TAGAACCTGTTTAAACTGGACCAAGGCTCTCAGAACAAGAACCCAAGATCCCTCCCGCCCCAGACCTCCCGTGACTGTTTCGAGGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR TCA 90 bp | CTTCTTCATCCACACCCACCGCACACTCAGACCTGTTACCCAGCCTaGATCCCTTGCCTCTGTGTCTTTCCAAGTTCAAGGATGGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: LLHPHPPHTQTCYPA*IPCLCVFPSSRMVV Trigger: TACCACCATCCTTGAACTTGGAAAGACACAGAGGCAAGGGATTCAGGCTGGGTAACAGGTCTGAGTGTGCGGTGGGTGTGGATGAAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR TCA 90 bp | CAGTCACGGGAGGTCTGGGGCGGGAGGGATCTTGGGTTCTTGTTCTaGGAGCCTTGGTCCAGTTTAAACAGGTTCTACAAGAATGCATTT | + |
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Preference number: 1 (lower is better) Translates to: QSREVWGGRDLGFLF*EPWSSLNRFYKNAF Trigger: AAATGCATTCTTGTAGAACCTGTTTAAACTGGACCAAGGCTCTCAGAACAAGAACCCAAGATCCCTCCCGCCCCAGACCTCCCGTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR TCA 90 bp | ATAAGCAACATATACACTGAACAGGGAATAGAAAACACGGCTAGCTaGGCAGGCCATGGAGACGTAAAGAACAGGAGTATGCGGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: ISNIYTEQGIENTAS*AGHGDVKNRSMRAR Trigger: TCTTGCCCGCATACTCCTGTTCTTTACGTCTCCATGGCCTGCTCAGCTAGCCGTGTTTTCTATTCCCTGTTCAGTGTATATGTTGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR-3UTR GCA 90 bp | CCACCTGCTTGCAGGCAGCCAGAGACTCCAAGCCGCTACATCCACCCAGGCCTGGCACCTACCCTGGCTTaGGGCTCCGGAGGTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: PPACRQPETPSRYIHPGLAPTLA*GSGGGW Trigger: CCATCCACCTCCGGAGCCGCAAGCCAGGGTAGGTGC...CAGGCCTGGGTGGATGTAGCGGCTTGGAGTCTCTGGCTGCCTGCAAGCAGGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CAA 90 bp | CGCCAACCCTTGCAGGGTGAGGAAGCTCACCCCATCCCTGTGCGGTaGCCTGAGGTACCTTCACGAGGAGAGATACACTGGCCCGTCCGC | + |
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Preference number: 2 (lower is better) Translates to: RQPLQGEEAHPIPVR*PEVPSRGEIHWPVR Trigger: GCGGACGGGCCAGTGTATCTCTCCTCGTGAAGGTACCTCAGGCAACCGCACAGGGATGGGGTGAGCTTCCTCACCCTGCAAGGGTTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTTGGGGCGACAAGGGTCTACGCAGCACCTACCCTaGCTTGCGGCTCCGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: STQAWALEGSILLGRQGSTQHLP*LAAPEV Trigger: CACCTCCGGAGCCGCAAGCCAGGGTAGGTGCTGCGT...AGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR GCA 90 bp | GTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGGGCAGGTGGGTCCTGGCTTaGGGCTCCGGAGGTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: VCGQEFQASSKQSREVWGRWVLA*GSGGGW Trigger: CCATCCACCTCCGGAGCCGCAAGCCAGGACCCACCT...GCCCCAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR-3UTR GCA 90 bp | CCACCTGCTTGCAGGCAGCCAGAGACTCCAAGCCGCTACATCCACCCAGGCCTGCTCACCCCATCCCTGTaGGGTTGCCTGAGGTACCTT | + |
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Preference number: 2 (lower is better) Translates to: PPACRQPETPSRYIHPGLLTPSL*GCLRYL Trigger: AAGGTACCTCAGGCAACCGCACAGGGATGGGGTGAG...CAGGCCTGGGTGGATGTAGCGGCTTGGAGTCTCTGGCTGCCTGCAAGCAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CAA 90 bp | GCGGGCATCGCATCTCCTGGCCTCCGCTGGCCTAAGGAAGACGTTTaGACAACCGCTCCCCACAGAGTCACCCACAGATACCCATCCACC | + |
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Preference number: 2 (lower is better) Translates to: AGIASPGLRWPKEDV*TTAPHRVTHRYPST Trigger: GGTGGATGGGTATCTGTGGGTGACTCTGTGGGGAGCGGTTGTCAAAACGTCTTCCTTAGGCCAGCGGAGGCCAGGAGATGCGATGCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTGCTTGCAGGCAGCCAGAGACTCCAAGCCGCTACATCCACCCAGGCCTGTGTCTGTACCACGCGTaGGCTCCTCAGCTCCATAGA | + |
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Preference number: 2 (lower is better) Translates to: PPACRQPETPSRYIHPGLCLYHA*APQLHR Trigger: TCTATGGAGCTGAGGAGCCCACGCGTGGTACAGACA...CAGGCCTGGGTGGATGTAGCGGCTTGGAGTCTCTGGCTGCCTGCAAGCAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR TCA 90 bp | TATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGGGCGCACTGGCAGGAAGGCTaGTGCCCATCCCCTGGGTAT | + |
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Preference number: 2 (lower is better) Translates to: YAGKNSRLPRNSHGRSGAHWQEG*CPSPGY Trigger: ATACCCAGGGGATGGGCATCAGCCTTCCTGCCAGTG...CGCCCCAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR CAA 90 bp | GCCGCTACATCCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTaGGGGCGACAAGGGTCTACTGCATTCTTGGCGCCCAGAGATTTG | + |
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Preference number: 2 (lower is better) Translates to: AATSTQAWALEGSIL*GRQGSTAFLAPRDL Trigger: CAAATCTCTGGGCGCCAAGAATGCAGTAGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGATGTAGCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR GCA 90 bp | CGAAACAGTCACGGGAGGTCTGGGGCGGGAGGGATCTTGGGTTCTTGTTCTGAGTGGGTCTCTGTCCCCTaGCAAACACTTGGGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: RNSHGRSGAGGILGSCSEWVSVP*QTLGHW Trigger: CCAGTGCCCAAGTGTTTGGCAGGGGACAGAGACCCA...CTCAGAACAAGAACCCAAGATCCCTCCCGCCCCAGACCTCCCGTGACTGTTTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGGTCTACTGCATTCTTGGCGCCCAGAGATTTGCTCCTCTGTGAACCTGGAGCCAACCCTTGCAGGGTaGGGAAGCTCACCCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: KGLLHSWRPEICSSVNLEPTLAG*GSSPHP Trigger: GGGATGGGGTGAGCTTCCTCACCCTGCAAGGGTTGG...CTCCAGGTTCACAGAGGAGCAAATCTCTGGGCGCCAAGAATGCAGTAGACCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGACCTGTTACCCAGCCTGAATCCCTTGCCTCTGTGTCTTTCCAAGTTCAAGGGTCGCGCCAACCCTTaGAGGGTGAGGAAGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: SDLLPSLNPLPLCLSKFKGRANP*RVRKLT Trigger: GGTGAGCTTCCTCACCCTGCAAGGGTTGGCGCGACC...CTTGAACTTGGAAAGACACAGAGGCAAGGGATTCAGGCTGGGTAACAGGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTCTACTGCATTCTTGGCGCCCAGAGATTTGCTCCTCTGTGAACCTGGAGCCGAACGGATACCCTTaGCAAAAGACCTTGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: KGLLHSWRPEICSSVNLEPNGYP*QKTLGV Trigger: CACGCCCAAGGTCTTTTGCCAAGGGTATCCGTTCGG...CTCCAGGTTCACAGAGGAGCAAATCTCTGGGCGCCAAGAATGCAGTAGACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACAGGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGCCAACAGTGAGGAGATaGGGGCACAGAAGTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: KEQEYAGKNSRLPRNSHGPTVRR*GHRSHW Trigger: CCAGTGACTTCTGTGCCCTCATCTCCTCACTGTTGG...CCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCCTGTTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGACCTGTTACCCAGCCTGAATCCCTTGCCTCTGTGTCTTTCCAAGTTCAAGAGATTTGCTCCTCTGTaGACCTGGAGCCCCAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: SDLLPSLNPLPLCLSKFKRFAPL*TWSPSA Trigger: AGCGCTGGGGCTCCAGGTTCACAGAGGAGCAAATCT...CTTGAACTTGGAAAGACACAGAGGCAAGGGATTCAGGCTGGGTAACAGGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTGTTCTGAGAGCCTTGGTCCAGTTTAAACAGGTTCTACAAGAATGCATTCATGCGCCTGAGATGTaGAGGTGGGTCCTGGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: VLVLRALVQFKQVLQECIHAPEM*RWVLAC Trigger: GCAAGCCAGGACCCACCTGCACATCTCAGGCGCATG...AATGCATTCTTGTAGAACCTGTTTAAACTGGACCAAGGCTCTCAGAACAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTGTTCTGAGAGCCTTGGTCCAGTTTAAACAGGTTCTACAAGAATGCATTTATCTGAGGAGGATGTaGACCTGGGTCTCTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: VLVLRALVQFKQVLQECIYLRRM*TWVSVP Trigger: GGGGACAGAGACCCAGGTTCACATCCTCCTCAGATA...AATGCATTCTTGTAGAACCTGTTTAAACTGGACCAAGGCTCTCAGAACAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR-3UTR GCA 90 bp | AAATTAAGTGGGAAGAATTTTCTATACCACGCTCCCCTCGAAGATCTAAGCAAGTCCCAGGCAAGGCCCTaGTCACACTGCTTCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: KLSGKNFLYHAPLEDLSKSQARP*SHCFFI Trigger: GATGAAGAAGCAGTGTGAGCAGGGCCTTGCCTGGGA...CTTGCTTAGATCTTCGAGGGGAGCGTGGTATAGAAAATTCTTCCCACTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTAAGTGGGAAGAATTTTCTATACCACGCTCCCCTCGAAGATCTAAGCAAGTCCAATAAGTGTATTTaGACCCTGATGGGGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: KLSGKNFLYHAPLEDLSKSNKCI*TLMGNH Trigger: GTGGTTCCCCATCAGGGTCCAAATACACTTATTGGA...CTTGCTTAGATCTTCGAGGGGAGCGTGGTATAGAAAATTCTTCCCACTTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR GCA 72 bp | ACTGGCCCGTCCGCCCACCCACCCGTGCGTCGTGGATaGCCACCACACGCAGCACCTACCCTGGCTTGCGGC | + |
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Preference number: 3 (lower is better) Translates to: TGPSAHPPVRRG*PPHAAPTLACG Trigger: GCCGCAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCGGACGGGCCAGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 72 bp | TGCGTCGTGGATGCCCACCACACGCAGCACCTACCCTaGCTTGCGGCTCCGGAGGTGGATGGCACGGCGCGG | + |
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Preference number: 3 (lower is better) Translates to: CVVDAHHTQHLP*LAAPEVDGTAR Trigger: CCGCGCCGTGCCATCCACCTCCGGAGCCGCAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 72 bp | CAGTTCCGCATGCGCCTGAGATGTGCAGGTGGGTCCTaGCTTGCGGCTCCGGAGGTGGATGGCACGGCGCGG | + |
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Preference number: 3 (lower is better) Translates to: QFRMRLRCAGGS*LAAPEVDGTAR Trigger: CCGCGCCGTGCCATCCACCTCCGGAGCCGCAAGCCAGGACCCACCTGCACATCTCAGGCGCATGCGGAACTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR GCA 72 bp | CCGTGGCCGCATCCAGTTCCGCATGCGCCTGAGATGTaGAGGTGGGTCCTGGCTTGCGGCTCCGGAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PWPHPVPHAPEM*RWVLACGSGGG Trigger: TCCACCTCCGGAGCCGCAAGCCAGGACCCACCTGCACATCTCAGGCGCATGCGGAACTGGATGCGGCCACGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR GCA 72 bp | AGGAGAGATACACTGGCCCGTCCGCCCACCCACCCGTaGGTCGTGGATGCCCACCACACGCAGCACCTACCC | + |
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Preference number: 3 (lower is better) Translates to: RRDTLARPPTHP*VVDAHHTQHLP Trigger: GGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCGGACGGGCCAGTGTATCTCTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 72 bp | ATACACTGGCCCGTCCGCCCACCCACCCGTGCGTCGTaGATGCCCACCACACGCAGCACCTACCCTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: IHWPVRPPTRAS*MPTTRSTYPGL Trigger: CAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCGGACGGGCCAGTGTAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 72 bp | CCGCATCCAGTTCCGCATGCGCCTGAGATGTGCAGGTaGGTCCTGGCTTGCGGCTCCGGAGGTGGATGGCAC | + |
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Preference number: 3 (lower is better) Translates to: PHPVPHAPEMCR*VLACGSGGGWH Trigger: GTGCCATCCACCTCCGGAGCCGCAAGCCAGGACCCACCTGCACATCTCAGGCGCATGCGGAACTGGATGCGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR CCA 72 bp | CGGTTGCCTGAGGTACCTTCACGAGGAGAGATACACTaGCCCGTCCGCCCACCCACCCGTGCGTCGTGGATG | + |
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Preference number: 3 (lower is better) Translates to: RLPEVPSRGEIH*PVRPPTRASWM Trigger: CATCCACGACGCACGGGTGGGTGGGCGGACGGGCCAGTGTATCTCTCCTCGTGAAGGTACCTCAGGCAACCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR CCA 72 bp | CCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTTaGGGCGACAAGGGTCTACTGCATTCTTGGCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: PPRPGRLRVPYF*GDKGLLHSWRP Trigger: TGGGCGCCAAGAATGCAGTAGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR GCA 72 bp | AGCTGTGCTGAGCTGCCTTCTTCCCAGGCAAGGCCCTaGTCACACTGCTTCTTCATCCACACCCACCGCACA | + |
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Preference number: 3 (lower is better) Translates to: SCAELPSSQARP*SHCFFIHTHRT Trigger: TGTGCGGTGGGTGTGGATGAAGAAGCAGTGTGAGCAGGGCCTTGCCTGGGAAGAAGGCAGCTCAGCACAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGTCTACTGCATTCTTGGCGCCCAGAGATTTGCTCCTCTGTGAACCTGGAGAGCACCTACCCTGGCTaGCGGCTCCGGAGGTGGATG | + |
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Preference number: 3 (lower is better) Translates to: KGLLHSWRPEICSSVNLESTYPG*RLRRWM Trigger: CATCCACCTCCGGAGCCGCAAGCCAGGGTAGGTGCT...CTCCAGGTTCACAGAGGAGCAAATCTCTGGGCGCCAAGAATGCAGTAGACCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR TCA 72 bp | CTCTGTCCCCTGCCAAACACTTGGGCACTGGGGTCATaGGGAGCCACAAGGTTGTCCAGGTGCCGAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LCPLPNTWALGS*GATRLSRCRKS Trigger: TGACTTTCGGCACCTGGACAACCTTGTGGCTCCTCATGACCCCAGTGCCCAAGTGTTTGGCAGGGGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| 3UTR TCA 72 bp | CATCTCCTGGCCTCCGCTGGCCTAAGGAAGACGTTTTaGCAACCGCTCCCCACAGAGTCACCCACAGATACC | + |
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Preference number: 3 (lower is better) Translates to: HLLASAGLRKTF*QPLPTESPTDT Trigger: GGTATCTGTGGGTGACTCTGTGGGGAGCGGTTGTCAAAACGTCTTCCTTAGGCCAGCGGAGGCCAGGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR GCA 72 bp | TCTGAAACACCAATCCGGTGCTCAGCTGTGCTGAGCTaGCTTCTTCCCAGGCAAGGCCCTGCTCACACTGCT | + |
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Preference number: 3 (lower is better) Translates to: SETPIRCSAVLS*LLPRQGPAHTA Trigger: AGCAGTGTGAGCAGGGCCTTGCCTGGGAAGAAGGCAGCTCAGCACAGCTGAGCACCGGATTGGTGTTTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR TCA 72 bp | TACTGCATTCTTGGCGCCCAGAGATTTGCTCCTCTGTaGACCTGGAGCCCCAGCGCTGAACAGAAACCTCTC | + |
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Preference number: 3 (lower is better) Translates to: YCILGAQRFAPL*TWSPSAEQKPL Trigger: GAGAGGTTTCTGTTCAGCGCTGGGGCTCCAGGTTCACAGAGGAGCAAATCTCTGGGCGCCAAGAATGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| 3UTR TCA 72 bp | CCACACCCACCGCACACTCAGACCTGTTACCCAGCCTaGATCCCTTGCCTCTGTGTCTTTCCAAGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PHPPHTQTCYPA*IPCLCVFPSSR Trigger: CCTTGAACTTGGAAAGACACAGAGGCAAGGGATTCAGGCTGGGTAACAGGTCTGAGTGTGCGGTGGGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| 3UTR TCA 72 bp | GCTAAGCAGCGGGTGCAGGACATGATAAACGCTCTCTaGAACACCAATCCGGTGCTCAGCTGTGCTGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AKQRVQDMINAL*NTNPVLSCAEL Trigger: CAGCTCAGCACAGCTGAGCACCGGATTGGTGTTTCAGAGAGCGTTTATCATGTCCTGCACCCGCTGCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| 3UTR CCA 72 bp | CCATACTTTTGGGGCGACAAGGGTCTACTGCATTCTTaGCGCCCAGAGATTTGCTCCTCTGTGAACCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PYFWGDKGLLHS*RPEICSSVNLE Trigger: CTCCAGGTTCACAGAGGAGCAAATCTCTGGGCGCCAAGAATGCAGTAGACCCTTGTCGCCCCAAAAGTATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| 3UTR TCA 72 bp | GAGGTCTGGGGCGGGAGGGATCTTGGGTTCTTGTTCTaGGAGCCTTGGTCCAGTTTAAACAGGTTCTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: EVWGGRDLGFLF*EPWSSLNRFYK Trigger: CTTGTAGAACCTGTTTAAACTGGACCAAGGCTCTCAGAACAAGAACCCAAGATCCCTCCCGCCCCAGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| 3UTR TCA 72 bp | AAAGTGACCATTTGTCCAATAAGTGTATTTGGACCCTaGTGGGGAACCACAGGCGGGTGGATTCCGAACGGA | + |
|
Preference number: 3 (lower is better) Translates to: KVTICPISVFGP*WGTTGGWIPNG Trigger: TCCGTTCGGAATCCACCCGCCTGTGGTTCCCCATCAGGGTCCAAATACACTTATTGGACAAATGGTCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| 3UTR TCA 72 bp | ATATACACTGAACAGGGAATAGAAAACACGGCTAGCTaGGCAGGCCATGGAGACGTAAAGAACAGGAGTATG | + |
|
Preference number: 3 (lower is better) Translates to: IYTEQGIENTAS*AGHGDVKNRSM Trigger: CATACTCCTGTTCTTTACGTCTCCATGGCCTGCTCAGCTAGCCGTGTTTTCTATTCCCTGTTCAGTGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | CGCCCACCCACCCGTGCGTCGTGGATGCCCACCACACGCAGCACCTACCCTGGCACTGCGCGCTCGGGCTaGCCTTCTTGCCGCGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RPPTRASWMPTTRSTYPGTARSG*PSCRAY Trigger: GTAAGCGCGGCAAGAAGGGCAGCCCGAGCGCGCAGT...GCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | GATGTGCAGGTGGGTCCTGGCTTGCGGCTCCGGAGGTGGATGGCACGGCGCGGCGCTCTTCCTCACTGGTaGCCAGACTGTCCACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DVQVGPGLRLRRWMARRGALPHW*PDCPRG Trigger: CCCCCGTGGACAGTCTGGGCACCAGTGAGGAAGAGC...GCCGCGCCGTGCCATCCACCTCCGGAGCCGCAAGCCAGGACCCACCTGCACATC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | GATGTGCAGGTGGGTCCTGGCTTGCGGCTCCGGAGGTGGATGGCACGGCGCGGCAGCTCCTCGAAAGACTaGGCGCTCGGGCTGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVQVGPGLRLRRWMARRGSSSKD*ALGLPF Trigger: GAAGGGCAGCCCGAGCGCGCAGTCTTTCGAGGAGCT...GCCGCGCCGTGCCATCCACCTCCGGAGCCGCAAGCCAGGACCCACCTGCACATC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR CCA 90 bp | TGCGTCGTGGATGCCCACCACACGCAGCACCTACCCTGGCTTGCGGCTCCGGAGGGCGCTCGCGCACGTTaGCCAGGATGCGCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVVDAHHTQHLPWLAAPEGARAR*PGCAGS Trigger: AGAGCCAGCGCATCCTGGCCAACGTGCGCGAGCGCC...CTCCGGAGCCGCAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | CGCCCACCCACCCGTGCGTCGTGGATGCCCACCACACGCAGCACCTACCCTGGCCCGAAGCGCTTGGGCTaGCTCTCCAGCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPTRASWMPTTRSTYPGPKRLG*LSSSSS Trigger: TGAGGAAGAGCTGGAGAGGCAGCCCAAGCGCTTCGG...GCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | TGGATGCCCACCACACGCAGCACCTACCCTGGCTTGCGGCTCCGGAGGTGGATGTCGGGCTGCCCTTCTTaGCGCGCTTACCCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WMPTTRSTYPGLRLRRWMSGCPS*RAYPGS Trigger: CGACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGA...CATCCACCTCCGGAGCCGCAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | TGGATGCCCACCACACGCAGCACCTACCCTGGCTTGCGGCTCCGGAGGTGGATGACCACGCGCCCTCCATaGGCCACACGGAGAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WMPTTRSTYPGLRLRRWMTTRPP*ATRRRR Trigger: ACGCCTTCTCCGTGTGGCGCATGGAGGGCGCGTGGT...CATCCACCTCCGGAGCCGCAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR TCA 90 bp | GTGCGTCGTGGATGCCCACCACACGCAGCACCTACCCTGGCTTGCGGCTCCGGAGCGTCTGGATCTTGCTaGGCTTGTCAGAGGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VRRGCPPHAAPTLACGSGASGSC*ACQRGA Trigger: CGCTCCCCTCTGACAAGCTCAGCAAGATCCAGACGC...TCCGGAGCCGCAAGCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCTCAGGGAAGCAGAGCCTGCAGGATACTGCCCCTGGGGCTGCCTGGGGCCAGCTCTTCCTCACTaGTGCCCAGACTGTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLREAEPAGYCPWGCLGPALPH*CPDCPR Trigger: CCGTGGACAGTCTGGGCACCAGTGAGGAAGAGCTGG...CCCCAGGCAGCCCCAGGGGCAGTATCCTGCAGGCTCTGCTTCCCTGAGGCCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTGCTTGCAGGCAGCCAGAGACTCCAAGCCGCTACATCCACCCAGGCCTGAGTGGGAGGCGGACATaGACCACGCGCCCTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PPACRQPETPSRYIHPGLSGRRT*TTRPPC Trigger: GCATGGAGGGCGCGTGGTCCATGTCCGCCTCCCACT...CAGGCCTGGGTGGATGTAGCGGCTTGGAGTCTCTGGCTGCCTGCAAGCAGGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | GATGTGCAGGTGGGTCCTGGCTTGCGGCTCCGGAGGTGGATGGCACGGCGCGGCCGTGAGCCACGTAGCTaGAGCTGGTCATCTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVQVGPGLRLRRWMARRGREPRS*SWSSYC Trigger: ACAATAAGATGACCAGCTGCAGCTACGTGGCTCACG...GCCGCGCCGTGCCATCCACCTCCGGAGCCGCAAGCCAGGACCCACCTGCACATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | CGCCCACCCACCCGTGCGTCGTGGATGCCCACCACACGCAGCACCTACCCTGGCCGTGAGCCACGTAGCTaGAGCTGGTCATCTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPPTRASWMPTTRSTYPGREPRS*SWSSYC Trigger: ACAATAAGATGACCAGCTGCAGCTACGTGGCTCACG...GCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | GTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGGGCACTGCGCGCTCGGGCTaGCCTTCTTGCCGCGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCGQEFQASSKQSREVWGTARSG*PSCRAY Trigger: GTAAGCGCGGCAAGAAGGGCAGCCCGAGCGCGCAGT...GCCCCAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGAACCTGGAGCCCCAGCGCTGAACAGAAACCTCTCTGCCGCGCCAGGGAGGATGCGCTGGCTCTaGAGCTCCTCGAAAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCEPGAPALNRNLSAAPGRMRWL*SSSKDC Trigger: GCAGTCTTTCGAGGAGCTGCAGAGCCAGCGCATCCT...CCCTGGCGCGGCAGAGAGGTTTCTGTTCAGCGCTGGGGCTCCAGGTTCACAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | TATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGGGCGACCACGCGCCCTCCATaGGCCACACGGAGAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YAGKNSRLPRNSHGRSGATTRPP*ATRRRR Trigger: ACGCCTTCTCCGTGTGGCGCATGGAGGGCGCGTGGT...CGCCCCAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR CCA 90 bp | TCCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTTGGGGCGACAAGGGTCTTCCGGCCGAAGCGCTTaGGCTGCCTCTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STQAWALEGSILLGRQGSSGRSA*AASPAL Trigger: AAGAGCTGGAGAGGCAGCCCAAGCGCTTCGGCCGGA...AGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCGGCGCTCGCGCACGTTaGCCAGGATGCGCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGVCGQEFQASSKQSREVGARAR*PGCAGS Trigger: AGAGCCAGCGCATCCTGGCCAACGTGCGCGAGCGCC...GACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| 3UTR CAA 72 bp | TCCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTaGGGGCGACAAGGGTCTACTGCATTCTTGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STQAWALEGSIL*GRQGSTAFLAP Trigger: GGGCGCCAAGAATGCAGTAGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR TCA 90 bp | CGAAACAGTCACGGGAGGTCTGGGGCGGGAGGGATCTTGGGTTCTTGTTCTGAGGCGTCTGGATCTTGCTaGGCTTGTCAGAGGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RNSHGRSGAGGILGSCSEASGSC*ACQRGA Trigger: CGCTCCCCTCTGACAAGCTCAGCAAGATCCAGACGC...CTCAGAACAAGAACCCAAGATCCCTCCCGCCCCAGACCTCCCGTGACTGTTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | TCCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTTGGGGCGACAAGGGTCTTACCCGGGGTCGGGCTaGCATCTTCGCTCGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STQAWALEGSILLGRQGSYPGSG*HLRSIS Trigger: AGAAATCGAGCGAAGATGGCAGCCCGACCCCGGGTA...AGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGATGCCCATCCCCTGGGTATCTGAGGAGGATGTGAACCTGGGTCTCTGTTCCGGCCGAAGCGCTTaGGCTGCCTCTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLMPIPWVSEEDVNLGLCSGRSA*AASPAL Trigger: AAGAGCTGGAGAGGCAGCCCAAGCGCTTCGGCCGGA...ACAGAGACCCAGGTTCACATCCTCCTCAGATACCCAGGGGATGGGCATCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR CCA 90 bp | AGGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGAGTGGGAGGCGGACATaGACCACGCGCCCTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RSMRARIPGFLETVTGGLSGRRT*TTRPPC Trigger: GCATGGAGGGCGCGTGGTCCATGTCCGCCTCCCACT...CAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| 3UTR CAA 72 bp | GACTCCAAGCCGCTACATCCACCCAGGCCTGGGCGCTaGAGGGTTCCATACTTTTGGGGCGACAAGGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: DSKPLHPPRPGR*RVPYFWGDKGL Trigger: TAGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGATGTAGCGGCTTGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGCCGAAGCGCTTGGGCTaGCTCTCCAGCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCGQEFQASSKQSREVWPKRLG*LSSSSS Trigger: TGAGGAAGAGCTGGAGAGGCAGCCCAAGCGCTTCGG...CCAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCCTGCCAAACACTTGGGCACTGGGGTCATGAGGAGCCACAAGGTTGTCTACCCGGGGTCGGGCTaGCATCTTCGCTCGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPAKHLGTGVMRSHKVVYPGSG*HLRSIS Trigger: AGAAATCGAGCGAAGATGGCAGCCCGACCCCGGGTA...GACAACCTTGTGGCTCCTCATGACCCCAGTGCCCAAGTGTTTGGCAGGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAGGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGTCGGGCTGCCCTTCTTaGCGCGCTTACCCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KEQEYAGKNSRLPRNSHGSGCPS*RAYPGS Trigger: CGACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGA...CCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCCTGTTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR CCA 90 bp | AGGCTGATGCCCATCCCCTGGGTATCTGAGGAGGATGTGAACCTGGGTCTCTGTCCAGCTCTTCCTCACTaGTGCCCAGACTGTCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RLMPIPWVSEEDVNLGLCPALPH*CPDCPR Trigger: CCGTGGACAGTCTGGGCACCAGTGAGGAAGAGCTGG...ACAGAGACCCAGGTTCACATCCTCCTCAGATACCCAGGGGATGGGCATCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | GGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGAGGATGCGCTGGCTCTaGAGCTCCTCGAAAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GVCGQEFQASSKQSREVWRMRWL*SSSKDC Trigger: GCAGTCTTTCGAGGAGCTGCAGAGCCAGCGCATCCT...CCAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| 3UTR CAA 72 bp | GGATGTGAACCTGGGTCTCTGTCCCCTGCCAAACACTaGGGCACTGGGGTCATGAGGAGCCACAAGGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCEPGSLSPAKH*GTGVMRSHKVV Trigger: GACAACCTTGTGGCTCCTCATGACCCCAGTGCCCAAGTGTTTGGCAGGGGACAGAGACCCAGGTTCACATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| 3UTR CAA 72 bp | TTGCAGGGTGAGGAAGCTCACCCCATCCCTGTGCGGTaGCCTGAGGTACCTTCACGAGGAGAGATACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQGEEAHPIPVR*PEVPSRGEIHW Trigger: CCAGTGTATCTCTCCTCGTGAAGGTACCTCAGGCAACCGCACAGGGATGGGGTGAGCTTCCTCACCCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| 3UTR CAA 72 bp | GCATCTCCTGGCCTCCGCTGGCCTAAGGAAGACGTTTaGACAACCGCTCCCCACAGAGTCACCCACAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPGLRWPKEDV*TTAPHRVTHRY Trigger: GTATCTGTGGGTGACTCTGTGGGGAGCGGTTGTCAAAACGTCTTCCTTAGGCCAGCGGAGGCCAGGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGCTTCGCTCGATTTCTTaGTGTAGCGCCGCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSMRARIPGFLETVTGGLLRSIS*CSAASG Trigger: GCCGGAAGCGGCGCTACAGCAAGAAATCGAGCGAAG...CAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR CCA 90 bp | AGGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGTTGGCCAGGATGCGCTaGCTCTGCAGCTCCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSMRARIPGFLETVTGGLLARMR*LCSSSK Trigger: TTTCGAGGAGCTGCAGAGCCAGCGCATCCTGGCCAA...CAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR GCA 90 bp | TCAGACCTGTTACCCAGCCTGAATCCCTTGCCTCTGTGTCTTTCCAAGTTCAAGGCTCTTCCTCACTGGTaGCCAGACTGTCCACGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLLPSLNPLPLCLSKFKALPHW*PDCPRG Trigger: CCCCCGTGGACAGTCTGGGCACCAGTGAGGAAGAGC...CTTGAACTTGGAAAGACACAGAGGCAAGGGATTCAGGCTGGGTAACAGGTCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR CCA 90 bp | TATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGGGCGCCACGTAGCTGCAGCTaGTCATCTTATTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YAGKNSRLPRNSHGRSGAPRSCS*SSYCPS Trigger: AGATGGACAATAAGATGACCAGCTGCAGCTACGTGG...CGCCCCAGACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| 3UTR CAA 72 bp | TCCATACTTTTGGGGCGACAAGGGTCTACTGCATTCTaGGCGCCCAGAGATTTGCTCCTCTGTGAACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SILLGRQGSTAF*APRDLLLCEPG Trigger: TCCAGGTTCACAGAGGAGCAAATCTCTGGGCGCCAAGAATGCAGTAGACCCTTGTCGCCCCAAAAGTATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR GCA 90 bp | AAATTAAGTGGGAAGAATTTTCTATACCACGCTCCCCTCGAAGATCTAAGCAAGAGCTCCTCGAAAGACTaGGCGCTCGGGCTGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSGKNFLYHAPLEDLSKSSSKD*ALGLPF Trigger: GAAGGGCAGCCCGAGCGCGCAGTCTTTCGAGGAGCT...CTTGCTTAGATCTTCGAGGGGAGCGTGGTATAGAAAATTCTTCCCACTTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| 3UTR CAA 72 bp | GGGCGGGAGGGATCTTGGGTTCTTGTTCTGAGAGCCTaGGTCCAGTTTAAACAGGTTCTACAAGAATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GREGSWVLVLRA*VQFKQVLQECI Trigger: AATGCATTCTTGTAGAACCTGTTTAAACTGGACCAAGGCTCTCAGAACAAGAACCCAAGATCCCTCCCGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
||
| CDS-3UTR CCA 90 bp | AAATTAAGTGGGAAGAATTTTCTATACCACGCTCCCCTCGAAGATCTAAGCAAGCCACGTAGCTGCAGCTaGTCATCTTATTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSGKNFLYHAPLEDLSKPRSCS*SSYCPS Trigger: AGATGGACAATAAGATGACCAGCTGCAGCTACGTGG...CTTGCTTAGATCTTCGAGGGGAGCGTGGTATAGAAAATTCTTCCCACTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| 3UTR CAA 72 bp | AGAAAGAAAACAAACCCACTGTATGAGACCAACATTTaGTGGCCACAGCAGCAACTTTCAAGATATTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKKTNPLYETNI*WPQQQLSRYYK Trigger: TTTATAATATCTTGAAAGTTGCTGCTGTGGCCACAAAATGTTGGTCTCATACAGTGGGTTTGTTTTCTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS-3UTR CAA 90 bp | CGCCCACCCACCCGTGCGTCGTGGATGCCCACCACACGCAGCACCTACCCTGGCTTCCGGCCGAAGCGCTaGGGCTGCCTCTCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPPTRASWMPTTRSTYPGFRPKR*GCLSSS Trigger: AGAGCTGGAGAGGCAGCCCAAGCGCTTCGGCCGGAA...GCCAGGGTAGGTGCTGCGTGTGGTGGGCATCCACGACGCACGGGTGGGTGGGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
||
| CDS GCA 90 bp | TGCCGCGCTTACCCGGGGTCGGGCTGCCATCTTCGCTCGATTTCTTaGTGTAGCGCCGCTTCCGGCCGAAGCGCTTGGGCTGCCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: CRAYPGSGCHLRSIS*CSAASGRSAWAASP Trigger: TGGAGAGGCAGCCCAAGCGCTTCGGCCGGAAGCGGCGCTACAGCAAGAAATCGAGCGAAGATGGCAGCCCGACCCCGGGTAAGCGCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007949.4 ENSMUST00000186075.2 |
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| CDS GCA 90 bp | GGCTCTGCAGCTCCTCGAAAGACTGCGCGCTCGGGCTGCCCTTCTTaGCGCGCTTACCCGGGGTCGGGCTGCCATCTTCGCTCGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: GSAAPRKTARSGCPS*RAYPGSGCHLRSIS Trigger: AGAAATCGAGCGAAGATGGCAGCCCGACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGAGCGCGCAGTCTTTCGAGGAGCTGCAGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007949.4 ENSMUST00000186075.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCCTCAGGGAAGCAGAGCCTGCAGGATACTGCCCCTGGGGCTGCCTGGGGTGGATCTTGCTGAGCTaGTCAGAGGGGAGCGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: QGLREAEPAGYCPWGCLGWILLS*SEGSVG Trigger: CCCCACGCTCCCCTCTGACAAGCTCAGCAAGATCCA...CCCCAGGCAGCCCCAGGGGCAGTATCCTGCAGGCTCTGCTTCCCTGAGGCCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCCCTGCCAAACACTTGGGCACTGGGGTCATGAGGAGCCACAAGGTTGTCCTCGGGCTGCCCTTCTaGCCGCGCTTACCCGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: LSPAKHLGTGVMRSHKVVLGLPF*PRLPGV Trigger: GACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGAG...GACAACCTTGTGGCTCCTCATGACCCCAGTGCCCAAGTGTTTGGCAGGGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| CDS-3UTR CAA 90 bp | AGGCTGATGCCCATCCCCTGGGTATCTGAGGAGGATGTGAACCTGGGTCTCTGTTGGCGCTCGCGCACGTaGGCCAGGATGCGCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RLMPIPWVSEEDVNLGLCWRSRT*ARMRWL Trigger: GAGCCAGCGCATCCTGGCCAACGTGCGCGAGCGCCA...ACAGAGACCCAGGTTCACATCCTCCTCAGATACCCAGGGGATGGGCATCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| CDS CCA 90 bp | CTTCGCTCGATTTCTTGCTGTAGCGCCGCTTCCGGCCGAAGCGCTTaGGCTGCCTCTCCAGCTCTTCCTCACTGGTGCCCAGACTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LRSISCCSAASGRSA*AASPALPHWCPDCP Trigger: TGGACAGTCTGGGCACCAGTGAGGAAGAGCTGGAGAGGCAGCCCAAGCGCTTCGGCCGGAAGCGGCGCTACAGCAAGAAATCGAGCGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007949.4 ENSMUST00000186075.2 |
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| CDS-3UTR CAA 90 bp | CGAAACAGTCACGGGAGGTCTGGGGCGGGAGGGATCTTGGGTTCTTGTTCTGAGTTCCGGCCGAAGCGCTaGGGCTGCCTCTCCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: RNSHGRSGAGGILGSCSEFRPKR*GCLSSS Trigger: AGAGCTGGAGAGGCAGCCCAAGCGCTTCGGCCGGAA...CTCAGAACAAGAACCCAAGATCCCTCCCGCCCCAGACCTCCCGTGACTGTTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| CDS-3UTR CAA 90 bp | CCACCTGCTTGCAGGCAGCCAGAGACTCCAAGCCGCTACATCCACCCAGGCCTGTTGAGCGTCTGGATCTaGCTGAGCTTGTCAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PPACRQPETPSRYIHPGLLSVWI*LSLSEG Trigger: CCCCTCTGACAAGCTCAGCAAGATCCAGACGCTCAA...CAGGCCTGGGTGGATGTAGCGGCTTGGAGTCTCTGGCTGCCTGCAAGCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| CDS-3UTR CAA 90 bp | TCCACCCAGGCCTGGGCGCTTGAGGGTTCCATACTTTTGGGGCGACAAGGGTCTTACCTGGCGGCCAGCTaGAGCGTCTGGATCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: STQAWALEGSILLGRQGSYLAAS*SVWILL Trigger: CAGCAAGATCCAGACGCTCAAGCTGGCCGCCAGGTA...AGACCCTTGTCGCCCCAAAAGTATGGAACCCTCAAGCGCCCAGGCCTGGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAGTATGCGGGCAAGAATTCCAGGCTTCCTCGAAACAGTCACGGGAGGTCTGGATCTTGCTGAGCTaGTCAGAGGGGAGCGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: TGVCGQEFQASSKQSREVWILLS*SEGSVG Trigger: CCCCACGCTCCCCTCTGACAAGCTCAGCAAGATCCA...GACCTCCCGTGACTGTTTCGAGGAAGCCTGGAATTCTTGCCCGCATACTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| CDS-3UTR CAA 90 bp | TGTGAACCTGGGTCTCTGTCCCCTGCCAAACACTTGGGCACTGGGGTCATGAGGTTGAGCGTCTGGATCTaGCTGAGCTTGTCAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: CEPGSLSPAKHLGTGVMRLSVWI*LSLSEG Trigger: CCCCTCTGACAAGCTCAGCAAGATCCAGACGCTCAA...CCTCATGACCCCAGTGCCCAAGTGTTTGGCAGGGGACAGAGACCCAGGTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| CDS-3UTR CAA 90 bp | AAATCCAACAGTGAGGAGATGAGGGCACAGAAGTCACTGGCAGGAAGGCTGATGTACCTGGCGGCCAGCTaGAGCGTCTGGATCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: KSNSEEMRAQKSLAGRLMYLAAS*SVWILL Trigger: CAGCAAGATCCAGACGCTCAAGCTGGCCGCCAGGTA...CATCAGCCTTCCTGCCAGTGACTTCTGTGCCCTCATCTCCTCACTGTTGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007949.4 |
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| CDS-3UTR CAA 90 bp | AAATTAAGTGGGAAGAATTTTCTATACCACGCTCCCCTCGAAGATCTAAGCAAGCTCGGGCTGCCCTTCTaGCCGCGCTTACCCGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KLSGKNFLYHAPLEDLSKLGLPF*PRLPGV Trigger: GACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGAG...CTTGCTTAGATCTTCGAGGGGAGCGTGGTATAGAAAATTCTTCCCACTTAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000186075.2 |
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| CDS GCA 72 bp | GCTCCTCGAAAGACTGCGCGCTCGGGCTGCCCTTCTTaGCGCGCTTACCCGGGGTCGGGCTGCCATCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: APRKTARSGCPS*RAYPGSGCHLR Trigger: GCGAAGATGGCAGCCCGACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGAGCGCGCAGTCTTTCGAGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007949.4 ENSMUST00000186075.2 |
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| CDS CAA 72 bp | AGCTCCTCGAAAGACTGCGCGCTCGGGCTGCCCTTCTaGCCGCGCTTACCCGGGGTCGGGCTGCCATCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SSSKDCALGLPF*PRLPGVGLPSS Trigger: CGAAGATGGCAGCCCGACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGAGCGCGCAGTCTTTCGAGGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007949.4 ENSMUST00000186075.2 |
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| CDS CAA 90 bp | TGGCTCTGCAGCTCCTCGAAAGACTGCGCGCTCGGGCTGCCCTTCTaGCCGCGCTTACCCGGGGTCGGGCTGCCATCTTCGCTCGATTTC | + |
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Preference number: 6 (lower is better) Translates to: WLCSSSKDCALGLPF*PRLPGVGLPSSLDF Trigger: GAAATCGAGCGAAGATGGCAGCCCGACCCCGGGTAAGCGCGGCAAGAAGGGCAGCCCGAGCGCGCAGTCTTTCGAGGAGCTGCAGAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007949.4 ENSMUST00000186075.2 |
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| CDS GCA 72 bp | TACCCGGGGTCGGGCTGCCATCTTCGCTCGATTTCTTaGTGTAGCGCCGCTTCCGGCCGAAGCGCTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: YPGSGCHLRSIS*CSAASGRSAWA Trigger: AGCCCAAGCGCTTCGGCCGGAAGCGGCGCTACAGCAAGAAATCGAGCGAAGATGGCAGCCCGACCCCGGGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007949.4 ENSMUST00000186075.2 |
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