Pregenerated sensors for TWF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023277Ensembl transcript IDs: ENSMUST00000024047.12, ENSMUST00000187647.2, ENSMUST00000187944.3, ENSMUST00000188650.2, ENSMUST00000216348.2, ENSMUST00000216850.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGGCAGAGTaGCAACCCTGTAGTCCACGTGCCCGGCCCTGTTCCCAGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LRAQAGEEGSPGVAE*QPCSPRARPCSQSR Trigger: TCTGGACTGGGAACAGGGCCGGGCACGTGGACTACAGGGTTGCCACTCTGCCACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR TCA 90 bp | GGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGGACAGTaGCAGGGCAAGGTCACACAGTGCTGGTCCAGAGGCAGGCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: GFASHPVHTDERQGQ*QGKVTQCWSRGRPS Trigger: TGAGGGCCTGCCTCTGGACCAGCACTGTGTGACCTTGCCCTGTCACTGTCCCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR GCA 90 bp | CTCTCGGCAGAAGTCAGTGGGGCAGGTGCGGCACACGATGACAGGTaGTTCTGGTACCCAGCCAAGGAGAGGTCATCCTTTACTGTCCCG | + |
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Preference number: 1 (lower is better) Translates to: LSAEVSGAGAAHDDR*FWYPAKERSSFTVP Trigger: CGGGACAGTAAAGGATGACCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGCCGCACCTGCCCCACTGACTTCTGCCGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| 3UTR TCA 90 bp | GTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATaGGAGGCAGGGACAGTGACAGGGCAAGGTCACACAGTGCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: VCAKVGFRQPPCTHR*EAGTVTGQGHTVLV Trigger: GACCAGCACTGTGTGACCTTGCCCTGTCACTGTCCCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR GCA 90 bp | CACAGTGCTGGTCCAGAGGCAGGCCCTCAGATATGGTCAGCCACCTaGCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGAGCCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: HSAGPEAGPQIWSAT*PPCPTGKQFLRAQA Trigger: AGCCTGGGCTCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTCTGGACCAGCACTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR CCA 90 bp | AGGGCAAGGTCACACAGTGCTGGTCCAGAGGCAGGCCCTCAGATATaGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGCAATTCCTT | + |
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Preference number: 1 (lower is better) Translates to: RARSHSAGPEAGPQI*SATCPPCPTGKQFL Trigger: AAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTCTGGACCAGCACTGTGTGACCTTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR GCA 90 bp | GCTGGGCTGCAACCACAGCACGAAATTTTCTGGAGGCTAGGTTTGTaGCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGA | + |
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Preference number: 1 (lower is better) Translates to: AGLQPQHEIFWRLGL*QGGVSPATLYTQMR Trigger: TCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAATTTCGTGCTGTGGTTGCAGCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCGAATCAAGTCGGAAGAGGAGGTAGCAGGGCTCTTGGGCGTCTAGCAGTGTCCCACTGGCTCCTGTaGGGCACCCAGCACGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SANQVGRGGSRALGRLAVSHWLL*GTQHEL Trigger: CAGCTCGTGCTGGGTGCCTCACAGGAGCCAGTGGGA...CACTGCTAGACGCCCAAGAGCCCTGCTACCTCCTCTTCCGACTTGATTCGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGCGTCTAGCAGTGGCAGCACAGCCCGGTCGTAGTCCTGGTCCCAGCGTCCCTTTAGCTCTTCAGTaGCTGGCTCCCAGCTATTGC | + |
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Preference number: 2 (lower is better) Translates to: LGRLAVAAQPGRSPGPSVPLALQ*LAPSYC Trigger: GCAATAGCTGGGAGCCAGCCACTGAAGAGCTAAAGG...GACGCTGGGACCAGGACTACGACCGGGCTGTGCTGCCACTGCTAGACGCCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGGAGAGGCAGGGACAGTaGCAGGGCAAGGTCACACAG | + |
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Preference number: 2 (lower is better) Translates to: WRLGLCQGGVSPATLYTQERQGQ*QGKVTQ Trigger: CTGTGTGACCTTGCCCTGTCACTGTCCCTGCCTCTC...CTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTTCTCTCTCGGCAGAAGTCAGTGGGGCAGGTGCGGCACACGATGACAGGCGGCGAATTGTCAGGTaGCCAGGCCAGGAAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: WSSLSAEVSGAGAAHDDRRRIVR*PGQEKP Trigger: TGGCTTTTCCTGGCCTGGTCACCTGACAATTCGCCG...CCTGTCATCGTGTGCCGCACCTGCCCCACTGACTTCTGCCGAGAGAGAACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCATCCTTGATGTGGCCGCCTCCAAACTCCTTCTTCACGGTGGCGCGTGTGCGGCGAATTGTCAGGTaGCCAGGCCAGGAAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSSLMWPPPNSFFTVARVRRIVR*PGQEKP Trigger: TGGCTTTTCCTGGCCTGGTCACCTGACAATTCGCCG...CACACGCGCCACCGTGAAGAAGGAGTTTGGAGGCGGCCACATCAAGGATGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187647.2 ENSMUST00000187944.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCTTCACGGTGGCGCGTGTGGCTGCATATAGCATCTTCAGCCGCACCGGCTTGAAGTTGGGACTTTaGAGGCCTGGCTGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SFFTVARVAAYSIFSRTGLKLGL*RPGWSS Trigger: GCTGCTCCAGCCAGGCCTGCAAAGTCCCAACTTCAA...GCCGGTGCGGCTGAAGATGCTATATGCAGCCACACGCGCCACCGTGAAGAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCACTGTAGCCAAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATGCAGGCCCTCAGATATaGTCAGCCACCTGCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PTHCSQRLLGWAATTARNAGPQI*SATCPP Trigger: AGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGC...ATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTTGGCTACAGTGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCCGAAGAGCTCATCCTTGATGTGGCCGCCTCCAAACTCCTTCTTCACGGTGGCACACGATGACAGGTaGTTCTGGTACCCAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VPKSSSLMWPPPNSFFTVAHDDR*FWYPAK Trigger: CTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGC...CACCGTGAAGAAGGAGTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGATGTGGCCGCCTCCAAACTCCTTCTTCACGGTGGCGCGTGTGGCTGCATAAGCTCATCCTTGATGTaGCCGCCTCCAAACTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LDVAASKLLLHGGACGCISSSLM*PPPNSF Trigger: GAAGGAGTTTGGAGGCGGCCACATCAAGGATGAGCT...TATGCAGCCACACGCGCCACCGTGAAGAAGGAGTTTGGAGGCGGCCACATCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187647.2 ENSMUST00000187944.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCATTCTGCGAATCAAGTCGGAAGAGGAGGTAGCAGGGCTCTTGGGCGTCTACGAAGAGCTCATCCTTaGTGTGGCCGCCTCCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: EHSANQVGRGGSRALGRLRRAHP*CGRLQT Trigger: AGTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCG...TAGACGCCCAAGAGCCCTGCTACCTCCTCTTCCGACTTGATTCGCAGAATGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACATATGGTCAGCCACCTaGCCTCCTTGTCCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: IFWRLGLCQGGVSPATLYIWSAT*PPCPTG Trigger: TCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATAT...GTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTATTGCTTCTTTCTTAAGTCTCTCCAAGGAGGAAACTGGGGCCCTGGACCCCTGCTTCCAGCTTaGAGTTGGGACTTTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PSYCFFLKSLQGGNWGPGPLLPA*SWDFAG Trigger: GCCTGCAAAGTCCCAACTTCAAGCTGGAAGCAGGGG...TCCAGGGCCCCAGTTTCCTCCTTGGAGAGACTTAAGAAAGAAGCAATAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGCCAAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATTTTCTGGAGGTTTGTGCCAAGGTaGGGTTTCGCCAGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: TVAKGFWAGLQPQHEIFWRFVPR*GFASHP Trigger: AGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCT...CCAGAAAATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTTGGCTACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCAGAGAGGCAGGGACAGTaGCAGGGCAAGGTCACACAG | + |
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Preference number: 2 (lower is better) Translates to: LYKIQHSTIPSCDIWPLPERQGQ*QGKVTQ Trigger: CTGTGTGACCTTGCCCTGTCACTGTCCCTGCCTCTC...TGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGTAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCAGCAGGCCCTCAGATATaGTCAGCCACCTGCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LYKIQHSTIPSCDIWPLPAGPQI*SATCPP Trigger: AGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGC...TGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGTAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR CAA 90 bp | TCCTCAATGATGACTTTGATAAGTCGGATGGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGCTCTTCAGTGGCTGGCTCCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SSMMTLISRMEPARA*AKNSFSSSVAGSQL Trigger: TAGCTGGGAGCCAGCCACTGAAGAGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCATCATTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCAGCTTTTGGGCTGGGCTaGAACCACAGCACGAAATTT | + |
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Preference number: 2 (lower is better) Translates to: LYKIQHSTIPSCDIWPLPAFGLG*NHSTKF Trigger: AAATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGC...TGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCCCAGCGTCCCACTGGCTCCTGTGAGGCACCCAGCACGAGCTGTTCGTCCTTCCCCTGCTTCCAGCTaGAAGTTGGGACTTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GPSVPLAPVRHPARAVRPSPASS*KLGLCR Trigger: CCTGCAAAGTCCCAACTTCAAGCTGGAAGCAGGGGA...AGGACGAACAGCTCGTGCTGGGTGCCTCACAGGAGCCAGTGGGACGCTGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR TCA 72 bp | CTCGGCAGAAGTCAGTGGGGCAGGTGCGGCACACGATaGCAGGTGCTTCTGGTACCCAGCCAAGGAGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: LGRSQWGRCGTR*QVLLVPSQGEV Trigger: GACCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGCCGCACCTGCCCCACTGACTTCTGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| 3UTR CCA 72 bp | GGCCGCCTCCAAACTCCTTCTTCACGGTGGCGCGTGTaGCTGCATATAGCATCTTCAGCCGCACCGGCGAAT | + |
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Preference number: 3 (lower is better) Translates to: GRLQTPSSRWRV*LHIASSAAPAN Trigger: ATTCGCCGGTGCGGCTGAAGATGCTATATGCAGCCACACGCGCCACCGTGAAGAAGGAGTTTGGAGGCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187647.2 ENSMUST00000187944.3 |
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| 3UTR TCA 72 bp | AGCCACCCTGTACACACAGATGAGAGGCAGGGACAGTaGCAGGGCAAGGTCACACAGTGCTGGTCCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: SHPVHTDERQGQ*QGKVTQCWSRG Trigger: GCCTCTGGACCAGCACTGTGTGACCTTGCCCTGTCACTGTCCCTGCCTCTCATCTGTGTGTACAGGGTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR CAA 90 bp | GTCGGATGGAGCCAGCCCGGGCCTTGGCAAAGAATTCCTTTAGCTCTTCAGTGGCCGAAGAGCTCATCCTaGATGTGGCCGCCTCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: VGWSQPGPWQRIPLALQWPKSSS*MWPPPN Trigger: GTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCGG...CCACTGAAGAGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTCCATCCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR-3UTR CAA 90 bp | GTCCCGAAGAGCTCATCCTTGATGTGGCCGCCTCCAAACTCCTTCTTCACGGTGCTTGAAGTTGGGACTTaGCAGGCCTGGCTGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VPKSSSLMWPPPNSFFTVLEVGT*QAWLEQ Trigger: CTGCTCCAGCCAGGCCTGCAAAGTCCCAACTTCAAG...CACCGTGAAGAAGGAGTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| 3UTR GCA 72 bp | GAAGTCAGTGGGGCAGGTGCGGCACACGATGACAGGTaGTTCTGGTACCCAGCCAAGGAGAGGTCATCCTTT | + |
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Preference number: 3 (lower is better) Translates to: EVSGAGAAHDDR*FWYPAKERSSF Trigger: AAAGGATGACCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGCCGCACCTGCCCCACTGACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| 3UTR GCA 72 bp | GGTCCAGAGGCAGGCCCTCAGATATGGTCAGCCACCTaGCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: GPEAGPQIWSAT*PPCPTGKQFLR Trigger: TCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTCTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR GCA 72 bp | AGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTaGCAACCGTCCCCACCCACTGTAGCCAAAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: SIQPSLPVTSGP*QPSPPTVAKGF Trigger: AAAGCCTTTGGCTACAGTGGGTGGGGACGGTTGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR CCA 72 bp | GCACGAAATTTTCTGGAGGCTAGGTTTGTGCCAAGGTaGGGTTTCGCCAGCCACCCTGTACACACAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: ARNFLEARFVPR*GFASHPVHTDE Trigger: CTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAATTTCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATTTTCTGGAGGCTAGGTTTAGCCACCTGCCCTCCTaGTCCCACAGGAAAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: RLLGWAATTARNFLEARFSHLPS*SHRKAI Trigger: AATTGCTTTCCTGTGGGACAAGGAGGGCAGGTGGCT...AAACCTAGCCTCCAGAAAATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCAACCGTTCTGGAGGCTAGGTTaGTGCCAAGGTGGGGTTTCG | + |
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Preference number: 3 (lower is better) Translates to: TKYSIQPSLPVTSGPCQPFWRLG*CQGGVS Trigger: CGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAA...CGGTTGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CCA 90 bp | GTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGGACGGATGAGGCGCTTGTaGCCCCGCTTGCCCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPRWGFASHPVHTDERQGRMRRL*PRLPPG Trigger: CCCCGGGGGCAAGCGGGGCCACAAGCGCCTCATCCG...TCCCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CCA 90 bp | CCCACCCACTGTAGCCAAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATCGGATGAGGCGCTTGTaGCCCCGCTTGCCCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PTHCSQRLLGWAATTARNRMRRL*PRLPPG Trigger: CCCCGGGGGCAAGCGGGGCCACAAGCGCCTCATCCG...ATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTTGGCTACAGTGGGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR TCA 90 bp | GTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGGATCCCACTGGCTCCTGTaGGGCACCCAGCACGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VPRWGFASHPVHTDERQGSHWLL*GTQHEL Trigger: CAGCTCGTGCTGGGTGCCTCACAGGAGCCAGTGGGA...TCCCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGGCCCTCAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGTCCCACTGGCTCCTGTaGGGCACCCAGCACGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: EAGPQIWSATCPPCPTGKSHWLL*GTQHEL Trigger: CAGCTCGTGCTGGGTGCCTCACAGGAGCCAGTGGGA...CTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGTGCCCCCGGGGCCTTTaGGCTTGGCGAACGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: WRLGLCQGGVSPATLYTQCPRGL*AWRTPA Trigger: AGCAGGCGTTCGCCAAGCCCAAAGGCCCCGGGGGCA...CTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CCA 90 bp | GAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGGCAGTGCCCCCGGGGCCTTTaGGCTTGGCGAACGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ESNSLEPRLGRKEVQGWQCPRGL*AWRTPA Trigger: AGCAGGCGTTCGCCAAGCCCAAAGGCCCCGGGGGCA...CTGCCACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR TCA 90 bp | TCACGGTGGCGCGTGTGGCTGCATATAGCATCTTCAGCCGCACCGGCGAATTGTTCCCACTGGCTCCTGTaGGGCACCCAGCACGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SRWRVWLHIASSAAPANCSHWLL*GTQHER Trigger: ACGCTCGTGCTGGGTGCCTCACAGGAGCCAGTGGGA...ACAATTCGCCGGTGCGGCTGAAGATGCTATATGCAGCCACACGCGCCACCGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| CDS-3UTR CCA 90 bp | ACTCCTTCTTCACGGTGGCGCGTGTGGCTGCATATAGCATCTTCAGCCGCACCGAGCTCTTCAGTGGCGTaGATGCCGGTCTGGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: TPSSRWRVWLHIASSAAPSSSVA*MPVWCA Trigger: GGCGCACCAGACCGGCATCCACGCCACTGAAGAGCT...CGGTGCGGCTGAAGATGCTATATGCAGCCACACGCGCCACCGTGAAGAAGGAGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGGCCCTCAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGCGGCGAATTGTCAGGTaGCCAGGCCAGGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAGPQIWSATCPPCPTGKRRIVR*PGQEKP Trigger: TGGCTTTTCCTGGCCTGGTCACCTGACAATTCGCCG...CTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGAGGTGCGGCACACGATaGCAGGTGCTTCTGGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LCQGGVSPATLYTQMRGRRCGTR*QVLLVP Trigger: GGGTACCAGAAGCACCTGTCATCGTGTGCCGCACCT...CCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGGTGGCGAACGCCTGCTTaGACGCGTGTTGCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QESNSLEPRLGRKEVQGWWRTPA*TRVAWD Trigger: ATCCCAAGCAACACGCGTTCAAGCAGGCGTTCGCCA...CCACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTCACACAGTGCTGGTCCAGAGGCAGGCCCTCAGATATGGTCAGCCACCTGCAAGGAGGCGGCTCTTaGAGCTGGAGTAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KVTQCWSRGRPSDMVSHLQGGGS*SWSRAS Trigger: GGATGCTCTACTCCAGCTGCAAGAGCCGCCTCCTTG...CAGGTGGCTGACCATATCTGAGGGCCTGCCTCTGGACCAGCACTGTGTGACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGGCAGGGCTTGGCGAACGCCTaGTTGAACGCGTGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESNSLEPRLGRKEVQGWQGLANA*LNACCL Trigger: CAAGCAACACGCGTTCAAGCAGGCGTTCGCCAAGCC...CTGCCACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACAGCTCTTCAGTGGCGTaGATGCCGGTCTGGTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IFWRLGLCQGGVSPATLYSSSVA*MPVWCA Trigger: GGCGCACCAGACCGGCATCCACGCCACTGAAGAGCT...GTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024047.12 |
||
| CDS-3UTR CCA 90 bp | TGGTCCAGAGGCAGGCCCTCAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACGCTGGGCCACATTTGTaGGTTCTGTGTGTACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSRGRPSDMVSHLPSLSHAGPHL*VLCVPA Trigger: AGCTGGTACACACAGAACCCACAAATGTGGCCCAGC...GTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTCTGGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGGACGGGCATGGAGTAGATaGACACCACAGATTCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPRWGFASHPVHTDERQGRAWSR*TPQIQG Trigger: CCCTTGAATCTGTGGTGTTCATCTACTCCATGCCCG...TCCCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGAGAGCATCCGCTCCTTaGTGCTGCACTTGTACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FVPRWGFASHPVHTDERQRASAP*CCTCTR Trigger: CCGGGTACAAGTGCAGCATCAAGGAGCGGATGCTCT...CTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGCAAGGAGGCGGCTCTTaGAGCTGGAGTAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FVPRWGFASHPVHTDERQQGGGS*SWSRAS Trigger: GGATGCTCTACTCCAGCTGCAAGAGCCGCCTCCTTG...CTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGCTCAGCTGTCAGCTCTaGTCCATCGCCGATCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PALLVPQESNSLEPRLGRLSCQL*SIADLN Trigger: ATTGAGATCGGCGATGGAGCAGAGCTGACAGCTGAG...CCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | CCCACCCACTGTAGCCAAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATGGCTTGGCGAACGCCTaGTTGAACGCGTGTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTHCSQRLLGWAATTARNGLANA*LNACCL Trigger: CAAGCAACACGCGTTCAAGCAGGCGTTCGCCAAGCC...ATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTTGGCTACAGTGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGGAAGCCAGCCCGGGCCTTaGCAAAGAATTCCTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPRWGFASHPVHTDERQGSQPGP*QRIPLA Trigger: AGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCT...TCCCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGGCAGAGGCCCTGCAGCGTCTaGTGTTTACTTTCCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESNSLEPRLGRKEVQGWQRPCSV*CLLSTL Trigger: CAGCGTGGAAAGTAAACACCAGACGCTGCAGGGCCT...CTGCCACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| 3UTR CAA 72 bp | GCACCCAGCACGAGCTGTTCGTCCTCAATGATGACTTaGATAAGTCGGATGGAGCCAGCCCGGGCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: APSTSCSSSMMT*ISRMEPARALA Trigger: TGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCATCATTGAGGACGAACAGCTCGTGCTGGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
||
| CDS-3UTR TCA 90 bp | CCCACCCACTGTAGCCAAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATCGAAGAGCTCATCCTTaGTGTGGCCGCCTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PTHCSQRLLGWAATTARNRRAHP*CGRLQT Trigger: AGTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCG...ATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTTGGCTACAGTGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCAGGCCCTCAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACAGGACAGTCTTCACCTCATTaGTTCGGATCTGCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEAGPQIWSATCPPCPTGQSSPH*FGSAGV Trigger: AACTCCAGCAGATCCGAATCAATGAGGTGAAGACTG...TCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | GCACGAAATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACAGAGCATCCGCTCCTTaGTGCTGCACTTGTACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARNFLEARFVPRWGFASHRASAP*CCTCTR Trigger: CCGGGTACAAGTGCAGCATCAAGGAGCGGATGCTCT...GTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAATTTCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGCACACGATGACAGGTaGTTCTGGTACCCAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FVPRWGFASHPVHTDERQAHDDR*FWYPAK Trigger: CTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGC...CTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGAGGCCCTGCAGCGTCTaGTGTTTACTTTCCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGKQFLRAQAGEEGSPGVRPCSV*CLLSTL Trigger: CAGCGTGGAAAGTAAACACCAGACGCTGCAGGGCCT...CACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| 3UTR CAA 72 bp | CTGCCAACCGTCCCCACCCACTGTAGCCAAAGGCTTTaGGGCTGGGCTGCAACCACAGCACGAAATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTVPTHCSQRL*GWAATTARNFL Trigger: CAGAAAATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTTGGCTACAGTGGGTGGGGACGGTTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | GCGCGTGTGGCTGCATATAGCATCTTCAGCCGCACCGGCGAATTGTCAGGTGACGGCCAAGGTCAGATGTaGAGTTCTCCCCATTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: ARVAAYSIFSRTGELSGDGQGQM*SSPHST Trigger: AGTAGAATGGGGAGAACTGCACATCTGACCTTGGCC...GTCACCTGACAATTCGCCGGTGCGGCTGAAGATGCTATATGCAGCCACACGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
||
| CDS-3UTR CCA 90 bp | CAGCACGAAATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCGATGACAGGTGCTTCTaGTACCCAGCCAAGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHEIFWRLGLCQGGVSPADDRCF*YPAKER Trigger: CCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATC...GGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAATTTCGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGCTGGGCCACATTTGTaGGTTCTGTGTGTACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVPRWGFASHPVHTDERQAGPHL*VLCVPA Trigger: AGCTGGTACACACAGAACCCACAAATGTGGCCCAGC...CTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| 3UTR CAA 72 bp | GTGGCTGCATATAGCATCTTCAGCCGCACCGGCGAATaGTCAGGTGACCAGGCCAGGAAAAGCCACTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAAYSIFSRTGE*SGDQARKSHSK Trigger: TTTCGAGTGGCTTTTCCTGGCCTGGTCACCTGACAATTCGCCGGTGCGGCTGAAGATGCTATATGCAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187647.2 ENSMUST00000187944.3 |
||
| CDS-3UTR TCA 90 bp | ACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCAACCGCGGCGAATTGTCAGGTaGCCAGGCCAGGAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKYSIQPSLPVTSGPCQPRRIVR*PGQEKP Trigger: TGGCTTTTCCTGGCCTGGTCACCTGACAATTCGCCG...CGGTTGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGTACCCAGCCAAGGAGAGGTCATCCTTTACTGTCCCGAAGAGCTCATCCCTTTAGCTCTTCAGTaGCGTGGATGCCGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVPSQGEVILYCPEELIPLALQ*RGCRSG Trigger: ACCAGACCGGCATCCACGCCACTGAAGAGCTAAAGG...GATGAGCTCTTCGGGACAGTAAAGGATGACCTCTCCTTGGCTGGGTACCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACAGCTCATCCTTGATGTaGCCGCCTCCAAACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFWRLGLCQGGVSPATLYSSSLM*PPPNSF Trigger: GAAGGAGTTTGGAGGCGGCCACATCAAGGATGAGCT...GTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACCAGTCTTCACCTCATTaGTTCGGATCTGCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLEARFVPRWGFASHPVHQSSPH*FGSAGV Trigger: AACTCCAGCAGATCCGAATCAATGAGGTGAAGACTG...GTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAATTCCTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGGCAGAGGTTTACTTTCCACGCTaGTCTCAGTCTTCACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQFLRAQAGEEGSPGVAEVYFPR*SQSSPH Trigger: ATGAGGTGAAGACTGAGATCAGCGTGGAAAGTAAAC...CTCTGCCACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAGGAATTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACAGGGCATCACCCTCATaGGTATGCTTGTATAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLEARFVPRWGFASHPVHRASPS*VCLYRK Trigger: CTTCCTATACAAGCATACTCATGAGGGTGATGCCCT...GTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR GCA 90 bp | CAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGATTTGAGTTGCTGAAGTaGCCTCTGGGCCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIWSATCPPCPTGKQFLRFELLK*PLGLRL Trigger: CAGCCTGAGGCCCAGAGGGCACTTCAGCAACTCAAA...TCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | AAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCAACCGTCGATGACAGGTGCTTCTaGTACCCAGCCAAGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIQHSTIPSCDIWPLPTVDDRCF*YPAKER Trigger: CCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATC...GACGGTTGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACTTAGCTATCTCCAGCTaGAAGTCTTGCTCTACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLEARFVPRWGFASHPVHLAISS*KSCSTE Trigger: CTCCGTAGAGCAAGACTTCCAGCTGGAGATAGCTAA...GTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCCACTGTAGCCAAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATTTAGCTATCTCCAGCTaGAAGTCTTGCTCTACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTHCSQRLLGWAATTARNLAISS*KSCSTE Trigger: CTCCGTAGAGCAAGACTTCCAGCTGGAGATAGCTAA...ATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTTGGCTACAGTGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| 3UTR CAA 72 bp | ATGACTTTGATAAGTCGGATGGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGCTCTTCAGTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MTLISRMEPARA*AKNSFSSSVAG Trigger: GCCAGCCACTGAAGAGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACGTTTACTTTCCACGCTaGTCTCAGTCTTCACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLEARFVPRWGFASHPVHVYFPR*SQSSPH Trigger: ATGAGGTGAAGACTGAGATCAGCGTGGAAAGTAAAC...GTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATTTTCTGGAGGCTAGGTCGGGCATGGAGTAGATaGACACCACAGATTCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGFWAGLQPQHEIFWRLGRAWSR*TPQIQG Trigger: CCCTTGAATCTGTGGTGTTCATCTACTCCATGCCCG...ACCTAGCCTCCAGAAAATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR TCA 90 bp | CTTTACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCATGGCGAACGCCTGCTTaGACGCGTGTTGCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYKIQHSTIPSCDIWPLPWRTPA*TRVAWD Trigger: ATCCCAAGCAACACGCGTTCAAGCAGGCGTTCGCCA...TGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTTTTGGGCTGGGCTGCAACCACAGCACGAAATTTTCTGGAGGCTAGGTAGCTCATCCTTGATGTaGCCGCCTCCAAACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGFWAGLQPQHEIFWRLGSSSLM*PPPNSF Trigger: GAAGGAGTTTGGAGGCGGCCACATCAAGGATGAGCT...ACCTAGCCTCCAGAAAATTTCGTGCTGTGGTTGCAGCCCAGCCCAAAAGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCACCTTTAGCTCTTCAGTaGCGTGGATGCCGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYKIQHSTIPSCDIWPLPPLALQ*RGCRSG Trigger: ACCAGACCGGCATCCACGCCACTGAAGAGCTAAAGG...TGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024047.12 |
||
| CDS-3UTR TCA 90 bp | AAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCAACCGTCAGGGCATCACCCTCATaGGTATGCTTGTATAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIQHSTIPSCDIWPLPTVRASPS*VCLYRK Trigger: CTTCCTATACAAGCATACTCATGAGGGTGATGCCCT...GACGGTTGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGGCCCTCAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGTTGCCCCCGGGGCCTTaGGGCTTGGCGAACGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGPQIWSATCPPCPTGKLPPGP*GLANAC Trigger: GCAGGCGTTCGCCAAGCCCAAAGGCCCCGGGGGCAA...CTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGGCCCTCAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGCCGGGGCCTTTGGGCTaGGCGAACGCCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EAGPQIWSATCPPCPTGKPGPLG*ANACLN Trigger: GTTCAAGCAGGCGTTCGCCAAGCCCAAAGGCCCCGG...CTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTGAGGGCCTGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
||
| CDS-3UTR CAA 90 bp | GCACGAAATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACTTGCCCCCGGGGCCTTaGGGCTTGGCGAACGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARNFLEARFVPRWGFASHLPPGP*GLANAC Trigger: GCAGGCGTTCGCCAAGCCCAAAGGCCCCGGGGGCAA...GTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAATTTCGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS TCA 90 bp | GAGTTCTCTCTCGGCAGAAGTCAGTGGGGCAGGTGCGGCACACGATaGCAGGTGCTTCTGGTACCCAGCCAAGGAGAGGTCATCCGGCGA | + |
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Preference number: 5 (lower is better) Translates to: EFSLGRSQWGRCGTR*QVLLVPSQGEVIRR Trigger: TCGCCGGATGACCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGCCGCACCTGCCCCACTGACTTCTGCCGAGAGAGAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216348.2 |
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| CDS GCA 90 bp | CTCTCGGCAGAAGTCAGTGGGGCAGGTGCGGCACACGATGACAGGTaGTTCTGGTACCCAGCCAAGGAGAGGTCATCCGGCGAATTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LSAEVSGAGAAHDDR*FWYPAKERSSGELS Trigger: TGACAATTCGCCGGATGACCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGCCGCACCTGCCCCACTGACTTCTGCCGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216348.2 |
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| CDS CCA 90 bp | GGGCAGCATCTCGAGGAATCCGTGAGGGCAGCTGGGCCACATTTGTaGGTTCTGTGTGTACCAGCTCGATGGTCTCCCGTTCCAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GQHLEESVRAAGPHL*VLCVPARWSPVPGP Trigger: TGGACCTGGAACGGGAGACCATCGAGCTGGTACACACAGAACCCACAAATGTGGCCCAGCTGCCCTCACGGATTCCTCGAGATGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 ENSMUST00000216348.2 ENSMUST00000216850.2 |
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| CDS-3UTR CAA 90 bp | CCTGCCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGTTGGCGAACGCCTGCTaGAACGCGTGTTGCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: PALLVPQESNSLEPRLGRLANAC*NACCLG Trigger: TCCCAAGCAACACGCGTTCAAGCAGGCGTTCGCCAA...CCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACCCGGGGCCTTTGGGCTaGGCGAACGCCTGCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: IFWRLGLCQGGVSPATLYPGPLG*ANACLN Trigger: GTTCAAGCAGGCGTTCGCCAAGCCCAAAGGCCCCGG...GTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGAGCCCAGGCCGAAGAGCTCATCCTaGATGTGGCCGCCTCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: GQPPALLVPQESNSLEPRPKSSS*MWPPPN Trigger: GTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCGG...CCTGGGCTCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | CCTGCCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGGCAGCTGGGCCACATTaGTGGGTTCTGTGTGTACCA | + |
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Preference number: 5 (lower is better) Translates to: PALLVPQESNSLEPRLGRAAGPH*WVLCVP Trigger: TGGTACACACAGAACCCACAAATGTGGCCCAGCTGC...CCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | TTGTGCCAAGGTGGGGTTTCGCCAGCCACCCTGTACACACAGATGAGAGGCAGGTTGGCGAACGCCTGCTaGAACGCGTGTTGCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LCQGGVSPATLYTQMRGRLANAC*NACCLG Trigger: TCCCAAGCAACACGCGTTCAAGCAGGCGTTCGCCAA...CCTGCCTCTCATCTGTGTGTACAGGGTGGCTGGCGAAACCCCACCTTGGCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | GTCCCGAAGAGCTCATCCTTGATGTGGCCGCCTCCAAACTCCTTCTTCACGGTGGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: VPKSSSLMWPPPNSFFTVEPARA*AKNSFS Trigger: GCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTC...CACCGTGAAGAAGGAGTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAAGCAATTCCTTAGAGCCCAGGCTGGGGAGGAAGGAAGTCCAGGGGTGGGCAGCTGGGCCACATTaGTGGGTTCTGTGTGTACCA | + |
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Preference number: 5 (lower is better) Translates to: QESNSLEPRLGRKEVQGWAAGPH*WVLCVP Trigger: TGGTACACACAGAACCCACAAATGTGGCCCAGCTGC...CCACCCCTGGACTTCCTTCCTCCCCAGCCTGGGCTCTAAGGAATTGCTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | ACAGCACGAAATTTTCTGGAGGCTAGGTTTGTGCCAAGGTGGGGTTTCGCCAGCGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: TARNFLEARFVPRWGFASEPARA*AKNSFS Trigger: GCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTC...GCTGGCGAAACCCCACCTTGGCACAAACCTAGCCTCCAGAAAATTTCGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS CCA 90 bp | AGCTCTGCTCCATCGCCGATCTCAATCTTCTTAGCTATCTCCAGCTaGAAGTCTTGCTCTACGGAGTCAAGGAGGCGGCTCTTGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SSAPSPISIFLAISS*KSCSTESRRRLLQL Trigger: CAGCTGCAAGAGCCGCCTCCTTGACTCCGTAGAGCAAGACTTCCAGCTGGAGATAGCTAAGAAGATTGAGATCGGCGATGGAGCAGAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | CAGATATGGTCAGCCACCTGCCCTCCTTGTCCCACAGGAAAGCAATTCCTTAGACCGAAGAGCTCATCCTaGATGTGGCCGCCTCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: QIWSATCPPCPTGKQFLRPKSSS*MWPPPN Trigger: GTTTGGAGGCGGCCACATCAAGGATGAGCTCTTCGG...TCTAAGGAATTGCTTTCCTGTGGGACAAGGAGGGCAGGTGGCTGACCATATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS-3UTR CAA 90 bp | CTTTACAAAATACAGCATTCAACCATCCCTTCCTGTGACATCTGGCCCCTGCCACGTCTTCTGTTTGAGTaGCTGAAGTGCCCTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LYKIQHSTIPSCDIWPLPRLLFE*LKCPLG Trigger: GCCCAGAGGGCACTTCAGCAACTCAAACAGAAGACG...TGGCAGGGGCCAGATGTCACAGGAAGGGATGGTTGAATGCTGTATTTTGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS GCA 72 bp | CGCTTGCCCCCGGGGCCTTTGGGCTTGGCGAACGCCTaGTTGAACGCGTGTTGCTTGGGATGTACCTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: RLPPGPLGLANA*LNACCLGCTSS Trigger: TGACGAGGTACATCCCAAGCAACACGCGTTCAAGCAGGCGTTCGCCAAGCCCAAAGGCCCCGGGGGCAAGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS GCA 72 bp | GAAGTCAGTGGGGCAGGTGCGGCACACGATGACAGGTaGTTCTGGTACCCAGCCAAGGAGAGGTCATCCGGC | + |
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Preference number: 6 (lower is better) Translates to: EVSGAGAAHDDR*FWYPAKERSSG Trigger: GCCGGATGACCTCTCCTTGGCTGGGTACCAGAAGCACCTGTCATCGTGTGCCGCACCTGCCCCACTGACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216348.2 |
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| CDS TCA 72 bp | TGCCCCCGGGGCCTTTGGGCTTGGCGAACGCCTGCTTaGACGCGTGTTGCTTGGGATGTACCTCGTCATAGA | + |
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Preference number: 6 (lower is better) Translates to: CPRGLWAWRTPA*TRVAWDVPRHR Trigger: TCTATGACGAGGTACATCCCAAGCAACACGCGTTCAAGCAGGCGTTCGCCAAGCCCAAAGGCCCCGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS CAA 90 bp | AGCGGGCAGCATCTCGAGGAATCCGTGAGGGCAGCTGGGCCACATTaGTGGGTTCTGTGTGTACCAGCTCGATGGTCTCCCGTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SGQHLEESVRAAGPH*WVLCVPARWSPVPG Trigger: ACCTGGAACGGGAGACCATCGAGCTGGTACACACAGAACCCACAAATGTGGCCCAGCTGCCCTCACGGATTCCTCGAGATGCTGCCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 ENSMUST00000216348.2 ENSMUST00000216850.2 |
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| CDS CAA 72 bp | GTGAGGCACCCAGCACGAGCGTCCTCAATGATGACTTaGATAAGTCGGATGGAGCCAGCCCGGGCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VRHPARASSMMT*ISRMEPARALA Trigger: TGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCATCATTGAGGACGCTCGTGCTGGGTGCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187647.2 |
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| CDS TCA 72 bp | GAAGAAGTGGTAGCGGGCAGCATCTCGAGGAATCCGTaGGGGCAGCTGGGCCACATTTGTGGGTTCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EEVVAGSISRNP*GQLGHICGFCV Trigger: CACACAGAACCCACAAATGTGGCCCAGCTGCCCTCACGGATTCCTCGAGATGCTGCCCGCTACCACTTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 ENSMUST00000216348.2 ENSMUST00000216850.2 |
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| CDS GCA 72 bp | AGGAGGGCTCCATTCCAGCTTCTGTCCAACCTAGTCTaGAAGAGTCTAGGGGTCCGTGGATGCCGGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RRAPFQLLSNLV*KSLGVRGCRSG Trigger: ACCAGACCGGCATCCACGGACCCCTAGACTCTTGCAGACTAGGTTGGACAGAAGCTGGAATGGAGCCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187944.3 |
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| CDS CAA 72 bp | CATCTCGAGGAATCCGTGAGGGCAGCTGGGCCACATTaGTGGGTTCTGTGTGTACCAGCTCGATGGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: HLEESVRAAGPH*WVLCVPARWSP Trigger: GGGAGACCATCGAGCTGGTACACACAGAACCCACAAATGTGGCCCAGCTGCCCTCACGGATTCCTCGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 ENSMUST00000216348.2 ENSMUST00000216850.2 |
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| CDS CAA 90 bp | CAGGTCCAGCTTCAGCTGGATATAGTTGACCGTCTTCTGTTTGAGTaGCTGAAGTGCCCTCTGGGCCTCAGGCTGCAGAGGGAAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QVQLQLDIVDRLLFE*LKCPLGLRLQREGQ Trigger: CTGGCCTTCCCTCTGCAGCCTGAGGCCCAGAGGGCACTTCAGCAACTCAAACAGAAGACGGTCAACTATATCCAGCTGAAGCTGGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 ENSMUST00000216348.2 ENSMUST00000216850.2 |
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| CDS CAA 72 bp | TTCTGGTACCCAGCCAAGGAGAGGTCATCCGGCGAATaGTCAGGTGACCAGGCCAGGAAAAGCCACTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: FWYPAKERSSGE*SGDQARKSHSK Trigger: TTTCGAGTGGCTTTTCCTGGCCTGGTCACCTGACAATTCGCCGGATGACCTCTCCTTGGCTGGGTACCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216348.2 |
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| CDS CCA 72 bp | CCATCGCCGATCTCAATCTTCTTAGCTATCTCCAGCTaGAAGTCTTGCTCTACGGAGTCAAGGAGGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PSPISIFLAISS*KSCSTESRRRL Trigger: GAGCCGCCTCCTTGACTCCGTAGAGCAAGACTTCCAGCTGGAGATAGCTAAGAAGATTGAGATCGGCGATGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS CAA 90 bp | TCCTCAATGATGACTTTGATAAGTCGGATGGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGCTCTTCAGTGGCGTGGATGCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSMMTLISRMEPARA*AKNSFSSSVAWMPV Trigger: GACCGGCATCCACGCCACTGAAGAGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCATCATTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024047.12 ENSMUST00000187647.2 ENSMUST00000216348.2 |
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| CDS CAA 90 bp | TCCATCGCCGATCTCAATCTTCTTAGCTATCTCCAGCTGGAAGTCTaGCTCTACGGAGTCAAGGAGGCGGCTCTTGCAGCTGGAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SIADLNLLSYLQLEV*LYGVKEAALAAGVE Trigger: CTCTACTCCAGCTGCAAGAGCCGCCTCCTTGACTCCGTAGAGCAAGACTTCCAGCTGGAGATAGCTAAGAAGATTGAGATCGGCGATGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS CAA 72 bp | ATGACTTTGATAAGTCGGATGGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGCTCTTCAGTGGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: MTLISRMEPARA*AKNSFSSSVAW Trigger: CCACGCCACTGAAGAGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024047.12 ENSMUST00000187647.2 ENSMUST00000216348.2 |
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| CDS CAA 90 bp | AGCGTCTGGTGTTTACTTTCCACGCTGATCTCAGTCTTCACCTCATaGATTCGGATCTGCTGGAGTTCTCTCTCGGCAGAAGTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SVWCLLSTLISVFTS*IRICWSSLSAEVSG Trigger: CCCACTGACTTCTGCCGAGAGAGAACTCCAGCAGATCCGAATCAATGAGGTGAAGACTGAGATCAGCGTGGAAAGTAAACACCAGACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 ENSMUST00000216348.2 |
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| CDS GCA 72 bp | ATCTCAATCTTCTTAGCTATCTCCAGCTGGAAGTCTTaGTCTACGGAGTCAAGGAGGCGGCTCTTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ISIFLAISSWKS*STESRRRLLQL Trigger: CAGCTGCAAGAGCCGCCTCCTTGACTCCGTAGAGCAAGACTTCCAGCTGGAGATAGCTAAGAAGATTGAGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS CAA 72 bp | GATCTCAATCTTCTTAGCTATCTCCAGCTGGAAGTCTaGCTCTACGGAGTCAAGGAGGCGGCTCTTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: DLNLLSYLQLEV*LYGVKEAALAA Trigger: AGCTGCAAGAGCCGCCTCCTTGACTCCGTAGAGCAAGACTTCCAGCTGGAGATAGCTAAGAAGATTGAGATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 |
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| CDS CAA 72 bp | ATGACTTTGATAAGTCGGATGGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGCTCTTCAGTGGCTATA | + |
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Preference number: 6 (lower is better) Translates to: MTLISRMEPARA*AKNSFSSSVAI Trigger: TATAGCCACTGAAGAGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188650.2 |
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| CDS CAA 90 bp | TCCTCAATGATGACTTTGATAAGTCGGATGGAGCCAGCCCGGGCCTaGGCAAAGAATTCCTTTAGCTCTTCAGTGGCTATAAGCACAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSMMTLISRMEPARA*AKNSFSSSVAISTR Trigger: TCTTGTGCTTATAGCCACTGAAGAGCTAAAGGAATTCTTTGCCAAGGCCCGGGCTGGCTCCATCCGACTTATCAAAGTCATCATTGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188650.2 |
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| CDS CAA 72 bp | TGTTTACTTTCCACGCTGATCTCAGTCTTCACCTCATaGATTCGGATCTGCTGGAGTTCTCTCTCGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: CLLSTLISVFTS*IRICWSSLSAE Trigger: TTCTGCCGAGAGAGAACTCCAGCAGATCCGAATCAATGAGGTGAAGACTGAGATCAGCGTGGAAAGTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024047.12 ENSMUST00000188650.2 ENSMUST00000216348.2 |
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