Pregenerated sensors for TVP23A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050908Ensembl transcript IDs: ENSMUST00000051118.7, ENSMUST00000128288.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTGTGCTGTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTGGATaGAGGACCAGCAGTGGTGGCTCAGAACTGGACCCACAGAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: ACAVCTAILAARGLG*RTSSGGSELDPQSS Trigger: GGAGCTCTGTGGGTCCAGTTCTGAGCCACCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACACAGCACAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | AGGGGCCTGTGCTGTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTaGATGCAGGACCAGCAGTGGTGGCTCAGAACTGGACCCACAGAG | + |
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Preference number: 1 (lower is better) Translates to: RGLCCVHSHLSSPGA*MQDQQWWLRTGPTE Trigger: CTCTGTGGGTCCAGTTCTGAGCCACCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACACAGCACAGGCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | CACAGCCATCTTAGCAGCCCGGGGGCTTGGATGCAGGACCAGCAGTaGTGGCTCAGAACTGGACCCACAGAGCTCCTTAGAGGCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: HSHLSSPGAWMQDQQ*WLRTGPTELLRGCS Trigger: GCTGCAGCCTCTAAGGAGCTCTGTGGGTCCAGTTCTGAGCCACCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR TCA 90 bp | GGGAGACGTGGACTACCTCATCGTAGACACCCCGCCTGGCACGTCTaGCGAACACCTCTCAGTGGTCCAGTACCTGGCTGCGGCACACAT | + |
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Preference number: 1 (lower is better) Translates to: GRRGLPHRRHPAWHV*RTPLSGPVPGCGTH Trigger: ATGTGTGCCGCAGCCAGGTACTGGACCACTGAGAGGTGTTCGTCAGACGTGCCAGGCGGGGTGTCTACGATGAGGTAGTCCACGTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR GCA 90 bp | GTCGCAGATGCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCCAGGTaGCTAGGTCTCAGAGGGAAGAGCCTGAGGCAGACTACTTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: VADACDGSRKWSSAR*LGLRGKSLRQTTFS Trigger: GCTGAAAGTAGTCTGCCTCAGGCTCTTCCCTCTGAGACCTAGGCACCTGGCACTGCTCCACTTCCTGCTCCCGTCACAGGCATCTGCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | CCGGTGGATGTCCAGCCCTTCCAGCCTGGGCTTCTCGAAGTCACCTaGGAAGTCCGTCTGAAACACTGTCTGGGACAGAAAGCTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: PVDVQPFQPGLLEVT*EVRLKHCLGQKAGC Trigger: GCAGCCAGCTTTCTGTCCCAGACAGTGTTTCAGACGGACTTCCCAGGTGACTTCGAGAAGCCCAGGCTGGAAGGGCTGGACATCCACCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR GCA 90 bp | GAGTCTCAGATCTTCCCTCCCACGACTGGGGGTGCAGAGGCCATGTaGCAGGATCTGAGGATTCCACTTCTGGGCAAAGTGCCGCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: ESQIFPPTTGGAEAM*QDLRIPLLGKVPLD Trigger: ATCCAGCGGCACTTTGCCCAGAAGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGGAAGATCTGAGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | CATCATGGCCACCCAGCATGTCTACAGATCTCACCGCCTGCCCCCTaGGGACAGCACTGTCACTGTGCTGAGGCTGAGAATGTAGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: HHGHPACLQISPPAP*GQHCHCAEAENVGQ Trigger: TTGGCCTACATTCTCAGCCTCAGCACAGTGACAGTGCTGTCCCCAGGGGGCAGGCGGTGAGATCTGTAGACATGCTGGGTGGCCATGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | CGTGTCCAGACACCTAGTGCCGGTGGATGTCCAGCCCTTCCAGCCTaGGCTTCTCGAAGTCACCTGGGAAGTCCGTCTGAAACACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: RVQTPSAGGCPALPA*ASRSHLGSPSETLS Trigger: AGACAGTGTTTCAGACGGACTTCCCAGGTGACTTCGAGAAGCCCAGGCTGGAAGGGCTGGACATCCACCGGCACTAGGTGTCTGGACACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR TCA 90 bp | AGCCCTTCCAGCCTGGGCTTCTCGAAGTCACCTGGGAAGTCCGTCTaGAACACTGTCTGGGACAGAAAGCTGGCTGCAACTGTGCGCATA | + |
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Preference number: 1 (lower is better) Translates to: SPSSLGFSKSPGKSV*NTVWDRKLAATVRI Trigger: TATGCGCACAGTTGCAGCCAGCTTTCTGTCCCAGACAGTGTTTCAGACGGACTTCCCAGGTGACTTCGAGAAGCCCAGGCTGGAAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR GCA 90 bp | TGCCTCACAGAAAGAGTCTCAGATCTTCCCTCCCACGACTGGGGGTaGAGAGGCCATGTGCCAGGATCTGAGGATTCCACTTCTGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: CLTERVSDLPSHDWG*RGHVPGSEDSTSGQ Trigger: TTGCCCAGAAGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGGAAGATCTGAGACTCTTTCTGTGAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | TGCCCACTTCTAGGTATGATCAAGCAGTTCCTCCGTGATGTAGACTaGGGAGACGTGGACTACCTCATCGTAGACACCCCGCCTGGCACG | + |
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Preference number: 1 (lower is better) Translates to: CPLLGMIKQFLRDVD*GDVDYLIVDTPPGT Trigger: CGTGCCAGGCGGGGTGTCTACGATGAGGTAGTCCACGTCTCCCCAGTCTACATCACGGAGGAACTGCTTGATCATACCTAGAAGTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR TCA 90 bp | AGGAGAGAAGCAGTGAGGCCTGGGGCAGGCACCTCATATCCTCCATaGAATTCCAGTTATGTGTCCCTAGGACTGCAGGGCCCTTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: RREAVRPGAGTSYPP*NSSYVSLGLQGPWS Trigger: TGACCAAGGGCCCTGCAGTCCTAGGGACACATAACTGGAATTTCATGGAGGATATGAGGTGCCTGCCCCAGGCCTCACTGCTTCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR TCA 90 bp | AACTGTACAGCATCTCCTGGACCACACGTGCCTTTCCGTGCCCTCTaGATGAGGGATAACTGCTCTGTGAACTTTGCCAGGAGGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: NCTASPGPHVPFRAL*MRDNCSVNFARRWP Trigger: GGGCCACCTCCTGGCAAAGTTCACAGAGCAGTTATCCCTCATTCAGAGGGCACGGAAAGGCACGTGTGGTCCAGGAGATGCTGTACAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR GCA 90 bp | GATCACTGGGCAGATGATGAGACCAAGCCAGAAGATGCGTGCCTCTaGCTCAGTGGCAGCCATGTGGTTTGCAGAGACCTTTCTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: DHWADDETKPEDACL*LSGSHVVCRDLSGF Trigger: GAAGCCAGAAAGGTCTCTGCAAACCACATGGCTGCCACTGAGGCAGAGGCACGCATCTTCTGGCTTGGTCTCATCATCTGCCCAGTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR CCA 90 bp | CAACTGGGGCATGTGTTGTGTCTCTCCACCTTTGCTGTCCTTGAATaGGGAGCCGCAGGCAGCCATACAGCAGCAGGCACAAAAGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: QLGHVLCLSTFAVLE*GAAGSHTAAGTKEQ Trigger: TTGCTCTTTTGTGCCTGCTGCTGTATGGCTGCCTGCGGCTCCCCATTCAAGGACAGCAAAGGTGGAGAGACACAACACATGCCCCAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR TCA 90 bp | TGCCCTGTAGATTCCACTTTCCCCACAATAAGAGTTGAGCTTGCTTaGGTCGCAGATGCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: CPVDSTFPTIRVELA*VADACDGSRKWSSA Trigger: GGCACTGCTCCACTTCCTGCTCCCGTCACAGGCATCTGCGACTCAAGCAAGCTCAACTCTTATTGTGGGGAAAGTGGAATCTACAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR TCA 90 bp | CACTCAGCCTTGCCCACTTCTAGGTATGATCAAGCAGTTCCTCCGTaGTGTAGACTGGGGAGACGTGGACTACCTCATCGTAGACACCCC | + |
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Preference number: 1 (lower is better) Translates to: HSALPTSRYDQAVPP*CRLGRRGLPHRRHP Trigger: GGGGTGTCTACGATGAGGTAGTCCACGTCTCCCCAGTCTACATCACGGAGGAACTGCTTGATCATACCTAGAAGTGGGCAAGGCTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR GCA 90 bp | CCTCGATGTTCTGATTCCCTCTCCTGTATTCTCATTTTCCTGGGCTaGGGGTTAGTGGCTCTCATGCAGACTCCTGGGACCACTCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PRCSDSLSCILIFLG*GLVALMQTPGTTQQ Trigger: CTGCTGAGTGGTCCCAGGAGTCTGCATGAGAGCCACTAACCCGCAGCCCAGGAAAATGAGAATACAGGAGAGGGAATCAGAACATCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR GCA 90 bp | ACCTGGGAAGTCCGTCTGAAACACTGTCTGGGACAGAAAGCTGGCTaGAACTGTGCGCATATCACCGTCGCCTCCCATCTTACAGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: TWEVRLKHCLGQKAG*NCAHITVASHLTED Trigger: ATCCTCTGTAAGATGGGAGGCGACGGTGATATGCGCACAGTTGCAGCCAGCTTTCTGTCCCAGACAGTGTTTCAGACGGACTTCCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR CCA 90 bp | TCTTTCTGCCTCACAGAAAGAGTCTCAGATCTTCCCTCCCACGACTaGGGGTGCAGAGGCCATGTGCCAGGATCTGAGGATTCCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: SFCLTERVSDLPSHD*GCRGHVPGSEDSTS Trigger: AGAAGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGGAAGATCTGAGACTCTTTCTGTGAGGCAGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | AGTCACCTGGGAAGTCCGTCTGAAACACTGTCTGGGACAGAAAGCTaGCTGCAACTGTGCGCATATCACCGTCGCCTCCCATCTTACAGA | + |
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Preference number: 1 (lower is better) Translates to: SHLGSPSETLSGTES*LQLCAYHRRLPSYR Trigger: TCTGTAAGATGGGAGGCGACGGTGATATGCGCACAGTTGCAGCCAGCTTTCTGTCCCAGACAGTGTTTCAGACGGACTTCCCAGGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR TCA 90 bp | GGTCTCAGAGGGAAGAGCCTGAGGCAGACTACTTTCAGCTGCAGATaGCTACCCAAATGTGGGAGCTTCCCTTCTCCTGTCAGGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: GLRGKSLRQTTFSCR*LPKCGSFPSPVREE Trigger: TTCTTCCCTGACAGGAGAAGGGAAGCTCCCACATTTGGGTAGTCATCTGCAGCTGAAAGTAGTCTGCCTCAGGCTCTTCCCTCTGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR GCA 90 bp | AATCCAGATCACTGGGCAGATGATGAGACCAAGCCAGAAGATGCGTaGCTCTGCCTCAGTGGCAGCCATGTGGTTTGCAGAGACCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: NPDHWADDETKPEDA*LCLSGSHVVCRDLS Trigger: AGAAAGGTCTCTGCAAACCACATGGCTGCCACTGAGGCAGAGGCACGCATCTTCTGGCTTGGTCTCATCATCTGCCCAGTGATCTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR CCA 90 bp | AGGGAGTGGTGTGCAACTAACTCTGTCCCAGGCTCATCCAGGTATTaGTTTGCTGTGAGGAGACAAGGGCTCTTCTGCCCTGTAGATTCC | + |
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Preference number: 1 (lower is better) Translates to: REWCATNSVPGSSRY*FAVRRQGLFCPVDS Trigger: GGAATCTACAGGGCAGAAGAGCCCTTGTCTCCTCACAGCAAACCAATACCTGGATGAGCCTGGGACAGAGTTAGTTGCACACCACTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR TCA 90 bp | CTATTGGAACCACATGTCTATGCCACACATAGACAGGAGCACCCCTaGCTTCATCATGGCCACCCAGCATGTCTACAGATCTCACCGCCT | + |
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Preference number: 1 (lower is better) Translates to: LLEPHVYATHRQEHP*LHHGHPACLQISPP Trigger: AGGCGGTGAGATCTGTAGACATGCTGGGTGGCCATGATGAAGTCAGGGGTGCTCCTGTCTATGTGTGGCATAGACATGTGGTTCCAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR GCA 90 bp | ATGCTGCTGGAGATGTATGCCAGAAAGAAGGCACGCACTCAGCCTTaGCCACTTCTAGGTATGATCAAGCAGTTCCTCCGTGATGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: MLLEMYARKKARTQP*PLLGMIKQFLRDVD Trigger: GTCTACATCACGGAGGAACTGCTTGATCATACCTAGAAGTGGGCAAGGCTGAGTGCGTGCCTTCTTTCTGGCATACATCTCCAGCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | CCGGAAAGAGATCAGCTTCTGCCACAAGGTGAAGCTGCCCATCATTaGTGTGGTAGAAAACATGAGCGGTTTCATCTGCCCCAAGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: PERDQLLPQGEAAHH*CGRKHERFHLPQVQ Trigger: TTGCACTTGGGGCAGATGAAACCGCTCATGTTTTCTACCACACCAATGATGGGCAGCTTCACCTTGTGGCAGAAGCTGATCTCTTTCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CCA 90 bp | CTTCAAGGAGAACAAGGTACTGAAGAAGAACACAATCCAGATCACTaGGCAGATGATGAGACCAAGCCAGAAGATGCGTGCCTCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LQGEQGTEEEHNPDH*ADDETKPEDACLCL Trigger: GAGGCAGAGGCACGCATCTTCTGGCTTGGTCTCATCATCTGCCCAGTGATCTGGATTGTGTTCTTCTTCAGTACCTTGTTCTCCTTGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR GCA 90 bp | TATATTCCACATTTACATGTGTGTTTCCTCAGAGCTGCAGAAGCTTaGCCCGTCTGCATTTCCTTTCTTAGTCCTCGATGTTCTGATTCC | + |
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Preference number: 1 (lower is better) Translates to: YIPHLHVCFLRAAEA*PVCISFLSPRCSDS Trigger: GGAATCAGAACATCGAGGACTAAGAAAGGAAATGCAGACGGGGCAAGCTTCTGCAGCTCTGAGGAAACACACATGTAAATGTGGAATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGTCGCAGATGCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCCAGGTGCCAGGCAGAGGACAGGGTaGGTGCCAAGGGTTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LESQMPVTGAGSGAVPGARQRTG*VPRVLL Trigger: GAGCAGAACCCTTGGCACTCACCCTGTCCTCTGCCT...GGCACCTGGCACTGCTCCACTTCCTGCTCCCGTCACAGGCATCTGCGACTCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR CCA 90 bp | ACCCCGCCTGGCACGTCTGACGAACACCTCTCAGTGGTCCAGTACCTGGCTGCGAACTTTGCCAGGAGGTaGCCCTCCAGGATGTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: TPPGTSDEHLSVVQYLAANFARR*PSRMSG Trigger: TCCGGACATCCTGGAGGGCCACCTCCTGGCAAAGTT...CGCAGCCAGGTACTGGACCACTGAGAGGTGTTCGTCAGACGTGCCAGGCGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CAA 90 bp | TCCCTGAAGTGGAACAGGACCGAGTGCCACCTGCTAACCCCAGAGTaGGCAGGCCACGTGTCCAGACACCTAGTGCCGGTGGATGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SLKWNRTECHLLTPE*AGHVSRHLVPVDVQ Trigger: CTGGACATCCACCGGCACTAGGTGTCTGGACACGTGGCCTGCCAACTCTGGGGTTAGCAGGTGGCACTCGGTCCTGTTCCACTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGAGCAGGAAGTGGAGCAGTGCCAGGTGCCTAGGTCTCAGAGGGAAGAGCCTTCTCATGCAGACTCCTaGGACCACTCAGCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: REQEVEQCQVPRSQREEPSHADS*DHSAEQ Trigger: CTGCTCTGCTGAGTGGTCCCAGGAGTCTGCATGAGA...AGGCTCTTCCCTCTGAGACCTAGGCACCTGGCACTGCTCCACTTCCTGCTCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCACGACTGGGGGTGCAGAGGCCATGTGCCAGGATCTGAGGATTCCACTCTCATTTTCCTGGGCTaGGGGTTAGTGGCTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: PSHDWGCRGHVPGSEDSTLIFLG*GLVALM Trigger: CATGAGAGCCACTAACCCGCAGCCCAGGAAAATGAG...AGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTGGATGCAGGACCAGCAGTGGACTTTCAGCTGCAGATaGCTACCCAAATGTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CVHSHLSSPGAWMQDQQWTFSCR*LPKCGS Trigger: GCTCCCACATTTGGGTAGTCATCTGCAGCTGAAAGT...CCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR GCA 90 bp | ACCCCGCCTGGCACGTCTGACGAACACCTCTCAGTGGTCCAGTACCTGGCTGCGGACAGGGATGGTTTCTaGTTTTCCTGCTGTTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: TPPGTSDEHLSVVQYLAADRDGF*FSCCFG Trigger: CCCAAAACAGCAGGAAAAGCAGAAACCATCCCTGTC...CGCAGCCAGGTACTGGACCACTGAGAGGTGTTCGTCAGACGTGCCAGGCGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGAAAGCTGGCTGCAACTGTGCGCATATCACCGTCGCCTCCCATCTTACGACCAAGCCAGAAGATaGGTGCCTCTGCCTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GTESWLQLCAYHRRLPSYDQARR*VPLPQW Trigger: CCACTGAGGCAGAGGCACGCATCTTCTGGCTTGGTC...GTAAGATGGGAGGCGACGGTGATATGCGCACAGTTGCAGCCAGCTTTCTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGCTTGAGTCGCAGATGCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCCATTTGCTGTCCTTGAATaGGGAGCCGCAGGCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: SLLESQMPVTGAGSGAVPFAVLE*GAAGSH Trigger: ATGGCTGCCTGCGGCTCCCCATTCAAGGACAGCAAA...TGGCACTGCTCCACTTCCTGCTCCCGTCACAGGCATCTGCGACTCAAGCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTGGATGCAGGACCAGCAGTGGATGACTACCCAAATGTaGGAGCTTCCCTTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: CVHSHLSSPGAWMQDQQWMTTQM*ELPFSC Trigger: ACAGGAGAAGGGAAGCTCCCACATTTGGGTAGTCAT...CCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR CCA 90 bp | GGACAGAAAGCTGGCTGCAACTGTGCGCATATCACCGTCGCCTCCCATCTTACAGTGCCTCTGCCTCAGTaGCAGCCATGTGGTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GQKAGCNCAHITVASHLTVPLPQ*QPCGLQ Trigger: CTGCAAACCACATGGCTGCCACTGAGGCAGAGGCAC...TGTAAGATGGGAGGCGACGGTGATATGCGCACAGTTGCAGCCAGCTTTCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGTGGCTCAGAACTGGACCCACAGAGCTCCTTAGAGGCTGCAGCCACAGGTCAGAACTGAGGGAGTaGTGTGCAACTAACTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QWWLRTGPTELLRGCSHRSELRE*CATNSV Trigger: GACAGAGTTAGTTGCACACCACTCCCTCAGTTCTGA...CCTGTGGCTGCAGCCTCTAAGGAGCTCTGTGGGTCCAGTTCTGAGCCACCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGTTTCATCTGCCCCAAGTGCAAGGTGAGGGTCCCCAAGGCAGGCCTAAGAGGAAACGACAGGGATaGTTTCTGCTTTTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ERFHLPQVQGEGPQGRPKRKRQG*FLLFLL Trigger: CAGCAGGAAAAGCAGAAACCATCCCTGTCGTTTCCT...CTTAGGCCTGCCTTGGGGACCCTCACCTTGCACTTGGGGCAGATGAAACCGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR CAA 90 bp | GTCGCCTCCCATCTTACAGAGGATGTAGCCGTAGAGGTTCGCAGCTaGGAGGGAAATGCCAGCAATCACAAGAGCCAGCCACTTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VASHLTEDVAVEVRS*EGNASNHKSQPLQL Trigger: AAGCTGAAGTGGCTGGCTCTTGTGATTGCTGGCATTTCCCTCCAAGCTGCGAACCTCTACGGCTACATCCTCTGTAAGATGGGAGGCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
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| 3UTR-3UTR TCA 90 bp | AAACATGAGCGGTTTCATCTGCCCCAAGTGCAAGGTGAGGGTCCCCAAGGCAGGAAGCAACATCATTGCTaGGGAAGGGACACAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: KHERFHLPQVQGEGPQGRKQHHC*GRDTTG Trigger: CCCAGTTGTGTCCCTTCCTCAGCAATGATGTTGCTT...CCTGCCTTGGGGACCCTCACCTTGCACTTGGGGCAGATGAAACCGCTCATGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGGGTCCCCAAGGCAGGCCTAAGCACACCACTGTCACAGTGAGGAAACGAAATGGTCTTCAGAACTaGGGGAGTGGTGTGCAACTA | + |
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Preference number: 2 (lower is better) Translates to: GEGPQGRPKHTTVTVRKRNGLQN*GSGVQL Trigger: TAGTTGCACACCACTCCCTCAGTTCTGAAGACCATT...TCGTTTCCTCACTGTGACAGTGGTGTGCTTAGGCCTGCCTTGGGGACCCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTCTCCTGTCAGGGAAGAAGGGACTGAGGTGTTTGAATGGGGCCTTGGGTAGAGCTGCAGAAGCTTaGCCCGTCTGCATTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLLLSGKKGLRCLNGALGRAAEA*PVCISF Trigger: AAAGGAAATGCAGACGGGGCAAGCTTCTGCAGCTCT...ACCCAAGGCCCCATTCAAACACCTCAGTCCCTTCTTCCCTGACAGGAGAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCTCACAGAAAGAGTCTCAGATCTTCCCTCCCACGACTGGGGGTGCAGAGTGGTCCTCAGAATGGTaGATGTGTGTGCCTGTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SASQKESQIFPPTTGGAEWSSEW*MCVPVY Trigger: ATAAACAGGCACACACATTCACCATTCTGAGGACCA...CTCTGCACCCCCAGTCGTGGGAGGGAAGATCTGAGACTCTTTCTGTGAGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 90 bp | TTCTTTGGGCCTAGAATCTGCCTTTGCCGCAGCAAAGCAACATCATaGCTGAGGAAGGGACACAACTGGGGCATGTGTTGTGTCTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: FFGPRICLCRSKATS*LRKGHNWGMCCVSP Trigger: TGGAGAGACACAACACATGCCCCAGTTGTGTCCCTTCCTCAGCAATGATGTTGCTTTGCTGCGGCAAAGGCAGATTCTAGGCCCAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR-3UTR GCA 90 bp | CCGGAAAGAGATCAGCTTCTGCCACAAGGTGAAGCTGCCCATCATTGGTGTGGTAGACAAGGGCTCTTCTaGCCTGTAGATTCCACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PERDQLLPQGEAAHHWCGRQGLF*PVDSTF Trigger: GAAAGTGGAATCTACAGGGCAGAAGAGCCCTTGTCT...ACCACACCAATGATGGGCAGCTTCACCTTGTGGCAGAAGCTGATCTCTTTCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR-3UTR GCA 90 bp | ACAAGAGCCAGCCACTTCAGCTTCAAGGAGAACAAGGTACTGAAGAAGAACACAGAAGATGCGTGCCTCTaGCTCAGTGGCAGCCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: TRASHFSFKENKVLKKNTEDACL*LSGSHV Trigger: CACATGGCTGCCACTGAGGCAGAGGCACGCATCTTC...TGTGTTCTTCTTCAGTACCTTGTTCTCCTTGAAGCTGAAGTGGCTGGCTCTTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTTCGCAGCTTGGAGGGAAATGCCAGCAATCACAAGAGCCAGCCACTTCAGGCTTCAAATATCCAGTaGCTTTTCCCATCCTCGTCT | + |
|
Preference number: 2 (lower is better) Translates to: EVRSLEGNASNHKSQPLQASNIQ*LFPSSS Trigger: AGACGAGGATGGGAAAAGCCACTGGATATTTGAAGC...CTGAAGTGGCTGGCTCTTGTGATTGCTGGCATTTCCCTCCAAGCTGCGAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR GCA 72 bp | GCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCCAGGTaGCTAGGTCTCAGAGGGAAGAGCCTGAGGCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: ACDGSRKWSSAR*LGLRGKSLRQT Trigger: AGTCTGCCTCAGGCTCTTCCCTCTGAGACCTAGGCACCTGGCACTGCTCCACTTCCTGCTCCCGTCACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTGGATaGAGGACCAGCAGTGGTGGCTCAGAACTGGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: VCTAILAARGLG*RTSSGGSELDP Trigger: TGGGTCCAGTTCTGAGCCACCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR-3UTR CAA 90 bp | TCATCATGGCCACCCAGCATGTCTACAGATCTCACCGCCTGCCCCCTGGGGACACATGGGGACTGGGCCTaGAGGGAGGTTCACAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSWPPSMSTDLTACPLGTHGDWA*REVHRQ Trigger: TTGCCTGTGAACCTCCCTCAAGGCCCAGTCCCCATG...TGTCCCCAGGGGGCAGGCGGTGAGATCTGTAGACATGCTGGGTGGCCATGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | CCACGACTGGGGGTGCAGAGGCCATGTGCCAGGATCTaGGGATTCCACTTCTGGGCAAAGTGCCGCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: PRLGVQRPCARI*GFHFWAKCRWI Trigger: GATCCAGCGGCACTTTGCCCAGAAGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | GGACTACCTCATCGTAGACACCCCGCCTGGCACGTCTaGCGAACACCTCTCAGTGGTCCAGTACCTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GLPHRRHPAWHV*RTPLSGPVPGC Trigger: GCAGCCAGGTACTGGACCACTGAGAGGTGTTCGTCAGACGTGCCAGGCGGGGTGTCTACGATGAGGTAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | CTTAGCAGCCCGGGGGCTTGGATGCAGGACCAGCAGTaGTGGCTCAGAACTGGACCCACAGAGCTCCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSSPGAWMQDQQ*WLRTGPTELLR Trigger: TCTAAGGAGCTCTGTGGGTCCAGTTCTGAGCCACCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | TGCTGTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTaGATGCAGGACCAGCAGTGGTGGCTCAGAACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CCVHSHLSSPGA*MQDQQWWLRTG Trigger: TCCAGTTCTGAGCCACCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACACAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | CCTGGGCTGCGGGTTAGTGGCTCTCATGCAGACTCCTaGGACCACTCAGCAGAGCAGTTCTTTGGGCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGLRVSGSHADS*DHSAEQFFGPR Trigger: TCTAGGCCCAAAGAACTGCTCTGCTGAGTGGTCCCAGGAGTCTGCATGAGAGCCACTAACCCGCAGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | CACCCAGCATGTCTACAGATCTCACCGCCTGCCCCCTaGGGACAGCACTGTCACTGTGCTGAGGCTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HPACLQISPPAP*GQHCHCAEAEN Trigger: ATTCTCAGCCTCAGCACAGTGACAGTGCTGTCCCCAGGGGGCAGGCGGTGAGATCTGTAGACATGCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | ACACCTAGTGCCGGTGGATGTCCAGCCCTTCCAGCCTaGGCTTCTCGAAGTCACCTGGGAAGTCCGTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TPSAGGCPALPA*ASRSHLGSPSE Trigger: TTCAGACGGACTTCCCAGGTGACTTCGAGAAGCCCAGGCTGGAAGGGCTGGACATCCACCGGCACTAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR GCA 72 bp | ATCTTCCCTCCCACGACTGGGGGTGCAGAGGCCATGTaGCAGGATCTGAGGATTCCACTTCTGGGCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: IFPPTTGGAEAM*QDLRIPLLGKV Trigger: CACTTTGCCCAGAAGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGGAAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | GGGGACTGGGCCTTGAGGGAGGTTCACAGGCAAAGCTaGTCTCCCCTGGGTTACATATGGTCCTCAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: GDWALREVHRQS*SPLGYIWSSEW Trigger: CCATTCTGAGGACCATATGTAACCCAGGGGAGACCAGCTTTGCCTGTGAACCTCCCTCAAGGCCCAGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | GCAGTGAGGCCTGGGGCAGGCACCTCATATCCTCCATaGAATTCCAGTTATGTGTCCCTAGGACTGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AVRPGAGTSYPP*NSSYVSLGLQG Trigger: GCCCTGCAGTCCTAGGGACACATAACTGGAATTTCATGGAGGATATGAGGTGCCTGCCCCAGGCCTCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | ACTTCTGGGCAAAGTGCCGCTGGATCCACACATAGGTaGGTTCTGAGGGGCCTGTGCTGTGTGCACAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSGQSAAGSTHR*VLRGLCCVHSH Trigger: ATGGCTGTGCACACAGCACAGGCCCCTCAGAACTCACCTATGTGTGGATCCAGCGGCACTTTGCCCAGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GAAAGAGTCTCAGATCTTCCCTCCCACGACTGGGGGTaGAGAGGCCATGTGCCAGGATCTGAGGATTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ERVSDLPSHDWG*RGHVPGSEDST Trigger: AGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGGAAGATCTGAGACTCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | CACTGGGCAGATGATGAGACCAAGCCAGAAGATGCGTaGCTCTGCCTCAGTGGCAGCCATGTGGTTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HWADDETKPEDA*LCLSGSHVVCR Trigger: TCTGCAAACCACATGGCTGCCACTGAGGCAGAGGCACGCATCTTCTGGCTTGGTCTCATCATCTGCCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR CCA 72 bp | CATGTGTTGTGTCTCTCCACCTTTGCTGTCCTTGAATaGGGAGCCGCAGGCAGCCATACAGCAGCAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: HVLCLSTFAVLE*GAAGSHTAAGT Trigger: TGTGCCTGCTGCTGTATGGCTGCCTGCGGCTCCCCATTCAAGGACAGCAAAGGTGGAGAGACACAACACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | CTCACAGAAAGAGTCTCAGATCTTCCCTCCCACGACTaGGGGTGCAGAGGCCATGTGCCAGGATCTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LTERVSDLPSHD*GCRGHVPGSED Trigger: ATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGGAAGATCTGAGACTCTTTCTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | GGAAGTCCGTCTGAAACACTGTCTGGGACAGAAAGCTaGCTGCAACTGTGCGCATATCACCGTCGCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSPSETLSGTES*LQLCAYHRRLP Trigger: TGGGAGGCGACGGTGATATGCGCACAGTTGCAGCCAGCTTTCTGTCCCAGACAGTGTTTCAGACGGACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR CCA 72 bp | GTCCAGCCCTTCCAGCCTGGGCTTCTCGAAGTCACCTaGGAAGTCCGTCTGAAACACTGTCTGGGACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VQPFQPGLLEVT*EVRLKHCLGQK Trigger: TTTCTGTCCCAGACAGTGTTTCAGACGGACTTCCCAGGTGACTTCGAGAAGCCCAGGCTGGAAGGGCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR TCA 72 bp | GTCCCCAAGGCAGGCCTAAGCACACCACTGTCACAGTaGGGAAACGACAGGGATGGTTTCTGCTTTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VPKAGLSTPLSQ*GNDRDGFCFSC Trigger: GCAGGAAAAGCAGAAACCATCCCTGTCGTTTCCTCACTGTGACAGTGGTGTGCTTAGGCCTGCCTTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | GCATCTCCTGGACCACACGTGCCTTTCCGTGCCCTCTaGATGAGGGATAACTGCTCTGTGAACTTTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASPGPHVPFRAL*MRDNCSVNFAR Trigger: CCTGGCAAAGTTCACAGAGCAGTTATCCCTCATTCAGAGGGCACGGAAAGGCACGTGTGGTCCAGGAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | AGCCTGGGCTTCTCGAAGTCACCTGGGAAGTCCGTCTaGAACACTGTCTGGGACAGAAAGCTGGCTGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: SLGFSKSPGKSV*NTVWDRKLAAT Trigger: AGTTGCAGCCAGCTTTCTGTCCCAGACAGTGTTTCAGACGGACTTCCCAGGTGACTTCGAGAAGCCCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR GCA 72 bp | TTGGGAAGGGAGGGTCTCCATCAAGCCCTCTACTACTaGCTGGACGAAGACGCTTCAGAGTGTCACAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LGREGLHQALYY*LDEDASECHRQ Trigger: TTGCCTGTGACACTCTGAAGCGTCTTCGTCCAGGCAGTAGTAGAGGGCTTGATGGAGACCCTCCCTTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GCAGATGATGAGACCAAGCCAGAAGATGCGTGCCTCTaGCTCAGTGGCAGCCATGTGGTTTGCAGAGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: ADDETKPEDACL*LSGSHVVCRDL Trigger: AAGGTCTCTGCAAACCACATGGCTGCCACTGAGGCAGAGGCACGCATCTTCTGGCTTGGTCTCATCATCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR GCA 72 bp | GTCCGTCTGAAACACTGTCTGGGACAGAAAGCTGGCTaGAACTGTGCGCATATCACCGTCGCCTCCCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRLKHCLGQKAG*NCAHITVASHL Trigger: AAGATGGGAGGCGACGGTGATATGCGCACAGTTGCAGCCAGCTTTCTGTCCCAGACAGTGTTTCAGACGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR CCA 72 bp | GAAGGGAGGGTCTCCATCAAGCCCTCTACTACTGCCTaGACGAAGACGCTTCAGAGTGTCACAGGCAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: EGRVSIKPSTTA*TKTLQSVTGNK Trigger: CTTGTTGCCTGTGACACTCTGAAGCGTCTTCGTCCAGGCAGTAGTAGAGGGCTTGATGGAGACCCTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR-3UTR CAA 90 bp | CCGGAAAGAGATCAGCTTCTGCCACAAGGTGAAGCTGCCCATCATTGGTGTGGTCAGAGCTGCAGAAGCTaGCCCCGTCTGCATTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PERDQLLPQGEAAHHWCGQSCRS*PRLHFL Trigger: AAGGAAATGCAGACGGGGCAAGCTTCTGCAGCTCTG...ACCACACCAATGATGGGCAGCTTCACCTTGTGGCAGAAGCTGATCTCTTTCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | GGGAAGAGCCTGAGGCAGACTACTTTCAGCTGCAGATaGCTACCCAAATGTGGGAGCTTCCCTTCTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GKSLRQTTFSCR*LPKCGSFPSPV Trigger: GACAGGAGAAGGGAAGCTCCCACATTTGGGTAGTCATCTGCAGCTGAAAGTAGTCTGCCTCAGGCTCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | ACTCTGCTCCTGAGCTGGGCTCTGACAATTGTGCGCTaGATGGTCTTCAGAACTGAGGGAGTGGTGTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TLLLSWALTIVR*MVFRTEGVVCN Trigger: GTTGCACACCACTCCCTCAGTTCTGAAGACCATTCAGCGCACAATTGTCAGAGCCCAGCTCAGGAGCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | TCTGATTCCCTCTCCTGTATTCTCATTTTCCTGGGCTaGGGGTTAGTGGCTCTCATGCAGACTCCTGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SDSLSCILIFLG*GLVALMQTPGT Trigger: GGTCCCAGGAGTCTGCATGAGAGCCACTAACCCGCAGCCCAGGAAAATGAGAATACAGGAGAGGGAATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | ATCATTGGTGTGGTAGAAAACATGAGCGGTTTCATCTaGCCCAAGTGCAAGGTGAGGGTCCCCAAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IIGVVENMSGFI*PKCKVRVPKAG Trigger: GCCTGCCTTGGGGACCCTCACCTTGCACTTGGGGCAGATGAAACCGCTCATGTTTTCTACCACACCAATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GATGCGTGCCTCTGCCTCAGTGGCAGCCATGTGGTTTaGAGAGACCTTTCTGGCTTCAAATATCCAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DACLCLSGSHVV*RDLSGFKYPVA Trigger: AGCCACTGGATATTTGAAGCCAGAAAGGTCTCTGCAAACCACATGGCTGCCACTGAGGCAGAGGCACGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR CCA 72 bp | CTAGGTATGATCAAGCAGTTCCTCCGTGATGTAGACTaGGGAGACGTGGACTACCTCATCGTAGACACCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LGMIKQFLRDVD*GDVDYLIVDTP Trigger: CGGGGTGTCTACGATGAGGTAGTCCACGTCTCCCCAGTCTACATCACGGAGGAACTGCTTGATCATACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | GGCTCTGACAATTGTGCGCTGAATGGTCTTCAGAACTaGGGGAGTGGTGTGCAACTAACTCTGTCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSDNCALNGLQN*GSGVQLTLSQA Trigger: AGCCTGGGACAGAGTTAGTTGCACACCACTCCCTCAGTTCTGAAGACCATTCAGCGCACAATTGTCAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | CCACATGTCTATGCCACACATAGACAGGAGCACCCCTaGCTTCATCATGGCCACCCAGCATGTCTACAGATC | + |
|
Preference number: 3 (lower is better) Translates to: PHVYATHRQEHP*LHHGHPACLQI Trigger: GATCTGTAGACATGCTGGGTGGCCATGATGAAGTCAGGGGTGCTCCTGTCTATGTGTGGCATAGACATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GACCACTCAGCAGAGCAGTTCTTTGGGCCTAGAATCTaGCTTTGCCGCAGCAAAGCAACATCATTGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DHSAEQFFGPRI*LCRSKATSLLR Trigger: CCTCAGCAATGATGTTGCTTTGCTGCGGCAAAGGCAGATTCTAGGCCCAAAGAACTGCTCTGCTGAGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | GCAGACTACTTTCAGCTGCAGATGACTACCCAAATGTaGGAGCTTCCCTTCTCCTGTCAGGGAAGAAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ADYFQLQMTTQM*ELPFSCQGRRD Trigger: GTCCCTTCTTCCCTGACAGGAGAAGGGAAGCTCCCACATTTGGGTAGTCATCTGCAGCTGAAAGTAGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | TGTGCAACTAACTCTGTCCCAGGCTCATCCAGGTATTaGTTTGCTGTGAGGAGACAAGGGCTCTTCTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CATNSVPGSSRY*FAVRRQGLFCP Trigger: AGGGCAGAAGAGCCCTTGTCTCCTCACAGCAAACCAATACCTGGATGAGCCTGGGACAGAGTTAGTTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | CAATTGTGCGCTGAATGGTCTTCAGAACTGAGGGAGTaGTGTGCAACTAACTCTGTCCCAGGCTCATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLCAEWSSELRE*CATNSVPGSSR Trigger: CCTGGATGAGCCTGGGACAGAGTTAGTTGCACACCACTCCCTCAGTTCTGAAGACCATTCAGCGCACAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | CAGAAGATGCGTGCCTCTGCCTCAGTGGCAGCCATGTaGTTTGCAGAGACCTTTCTGGCTTCAAATATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QKMRASASVAAM*FAETFLASNIQ Trigger: CTGGATATTTGAAGCCAGAAAGGTCTCTGCAAACCACATGGCTGCCACTGAGGCAGAGGCACGCATCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCCACAAGGTGAAGCTGCCCATCATTGGTGTGGTAGAAAACATGAGCGGTGTGTCTCTCCACCTTaGCTGTCCTTGAATGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLPQGEAAHHWCGRKHERCVSPP*LSLNGE Trigger: CTCCCCATTCAAGGACAGCAAAGGTGGAGAGACACA...CCGCTCATGTTTTCTACCACACCAATGATGGGCAGCTTCACCTTGTGGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | GAATCTGCCTTTGCCGCAGCAAAGCAACATCATTGCTaGGGAAGGGACACAACTGGGGCATGTGTTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ESAFAAAKQHHC*GRDTTGACVVS Trigger: AGACACAACACATGCCCCAGTTGTGTCCCTTCCTCAGCAATGATGTTGCTTTGCTGCGGCAAAGGCAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | TTGCCCACTTCTAGGTATGATCAAGCAGTTCCTCCGTaGTGTAGACTGGGGAGACGTGGACTACCTCATCGT | + |
|
Preference number: 3 (lower is better) Translates to: LPTSRYDQAVPP*CRLGRRGLPHR Trigger: ACGATGAGGTAGTCCACGTCTCCCCAGTCTACATCACGGAGGAACTGCTTGATCATACCTAGAAGTGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | TCAGCAGAGCAGTTCTTTGGGCCTAGAATCTGCCTTTaGCGCAGCAAAGCAACATCATTGCTGAGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SAEQFFGPRICL*RSKATSLLRKG Trigger: TCCCTTCCTCAGCAATGATGTTGCTTTGCTGCGGCAAAGGCAGATTCTAGGCCCAAAGAACTGCTCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GAGATGTATGCCAGAAAGAAGGCACGCACTCAGCCTTaGCCACTTCTAGGTATGATCAAGCAGTTCCTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: EMYARKKARTQP*PLLGMIKQFLR Trigger: ACGGAGGAACTGCTTGATCATACCTAGAAGTGGGCAAGGCTGAGTGCGTGCCTTCTTTCTGGCATACATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | AAGCACACCACTGTCACAGTGAGGAAACGACAGGGATaGTTTCTGCTTTTCCTGCTGTTTTGGGAAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KHTTVTVRKRQG*FLLFLLFWEGR Trigger: CCTCCCTTCCCAAAACAGCAGGAAAAGCAGAAACCATCCCTGTCGTTTCCTCACTGTGACAGTGGTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | GATCAGCTTCTGCCACAAGGTGAAGCTGCCCATCATTaGTGTGGTAGAAAACATGAGCGGTTTCATCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DQLLPQGEAAHH*CGRKHERFHLP Trigger: GGGCAGATGAAACCGCTCATGTTTTCTACCACACCAATGATGGGCAGCTTCACCTTGTGGCAGAAGCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGACAGCACTGTCACTGTGCTGAGGCTGAGAATGTAGGCCAAATGCTTATGAGCAAAGCAACATCATaGCTGAGGAAGGGACACAAC | + |
|
Preference number: 3 (lower is better) Translates to: WGQHCHCAEAENVGQMLMSKATS*LRKGHN Trigger: GTTGTGTCCCTTCCTCAGCAATGATGTTGCTTTGCT...CATAAGCATTTGGCCTACATTCTCAGCCTCAGCACAGTGACAGTGCTGTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR TCA 72 bp | GCAGATAGCACCGCTGGGCAAGCACCTTCTCCCTATTaGCACTTAAGCCACATGACTATTGGAACCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: ADSTAGQAPSPY*HLSHMTIGTTC Trigger: ACATGTGGTTCCAATAGTCATGTGGCTTAAGTGTCAATAGGGAGAAGGTGCTTGCCCAGCGGTGCTATCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GTGTGTTTCCTCAGAGCTGCAGAAGCTTGCCCCGTCTaGATTTCCTTTCTTAGTCCTCGATGTTCTGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: VCFLRAAEACPV*ISFLSPRCSDS Trigger: GGAATCAGAACATCGAGGACTAAGAAAGGAAATGCAGACGGGGCAAGCTTCTGCAGCTCTGAGGAAACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GGACATGATAGGGTTGTAGGCAGAGGACAGGGTGAGTaGCAAGGGTTCTGCTCACTAAGAGGCAGTATATAT | + |
|
Preference number: 3 (lower is better) Translates to: GHDRVVGRGQGE*QGFCSLRGSIY Trigger: ATATATACTGCCTCTTAGTGAGCAGAACCCTTGGCACTCACCCTGTCCTCTGCCTACAACCCTATCATGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | AAACGACAGGGATGGTTTCTGCTTTTCCTGCTGTTTTaGGAAGGGAGGGTCTCCATCAAGCCCTCTACTACT | + |
|
Preference number: 3 (lower is better) Translates to: KRQGWFLLFLLF*EGRVSIKPSTT Trigger: AGTAGTAGAGGGCTTGATGGAGACCCTCCCTTCCCAAAACAGCAGGAAAAGCAGAAACCATCCCTGTCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATCAGCTTCTGCCACAAGGTGAAGCTGCCCATCATTGGTGTGGTAGAAAACAGCAGAGCAGTTCTTaGGGCCTAGAATCTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RDQLLPQGEAAHHWCGRKQQSSS*GLESAF Trigger: AAAGGCAGATTCTAGGCCCAAAGAACTGCTCTGCTG...TTTTCTACCACACCAATGATGGGCAGCTTCACCTTGTGGCAGAAGCTGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | GAACAAGGTACTGAAGAAGAACACAATCCAGATCACTaGGCAGATGATGAGACCAAGCCAGAAGATGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EQGTEEEHNPDH*ADDETKPEDAC Trigger: GCACGCATCTTCTGGCTTGGTCTCATCATCTGCCCAGTGATCTGGATTGTGTTCTTCTTCAGTACCTTGTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR GCA 72 bp | CATTTACATGTGTGTTTCCTCAGAGCTGCAGAAGCTTaGCCCGTCTGCATTTCCTTTCTTAGTCCTCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: HLHVCFLRAAEA*PVCISFLSPRC Trigger: ACATCGAGGACTAAGAAAGGAAATGCAGACGGGGCAAGCTTCTGCAGCTCTGAGGAAACACACATGTAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GTTGTAGGCAGAGGACAGGGTGAGTGCCAAGGGTTCTaGTCACTAAGAGGCAGTATATATTCCACATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: VVGRGQGECQGF*SLRGSIYSTFT Trigger: TGTAAATGTGGAATATATACTGCCTCTTAGTGAGCAGAACCCTTGGCACTCACCCTGTCCTCTGCCTACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | GTAGGCCAAATGCTTATGCATAATGAAAGATGCTGCTaGAGATGTATGCCAGAAAGAAGGCACGCACTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VGQMLMHNERCC*RCMPERRHALS Trigger: GCTGAGTGCGTGCCTTCTTTCTGGCATACATCTCCAGCAGCATCTTTCATTATGCATAAGCATTTGGCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CCA 72 bp | ACCTTCTCCCTATTGACACTTAAGCCACATGACTATTaGAACCACATGTCTATGCCACACATAGACAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TFSLLTLKPHDY*NHMSMPHIDRS Trigger: GCTCCTGTCTATGTGTGGCATAGACATGTGGTTCCAATAGTCATGTGGCTTAAGTGTCAATAGGGAGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | AATGTAGGCCAAATGCTTATGCATAATGAAAGATGCTaGTGGAGATGTATGCCAGAAAGAAGGCACGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: NVGQMLMHNERC*WRCMPERRHAL Trigger: GAGTGCGTGCCTTCTTTCTGGCATACATCTCCAGCAGCATCTTTCATTATGCATAAGCATTTGGCCTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR GCA 72 bp | GAGAATGTAGGCCAAATGCTTATGCATAATGAAAGATaGTGCTGGAGATGTATGCCAGAAAGAAGGCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: ENVGQMLMHNER*CWRCMPERRHA Trigger: TGCGTGCCTTCTTTCTGGCATACATCTCCAGCAGCATCTTTCATTATGCATAAGCATTTGGCCTACATTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | CTTGAGTCGCAGATGCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCCAGGTGCCCCAGCCCTTCCAGCCTaGGCTTCTCGAAGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LESQMPVTGAGSGAVPGAPALPA*ASRSHL Trigger: CAGGTGACTTCGAGAAGCCCAGGCTGGAAGGGCTGG...GGCACCTGGCACTGCTCCACTTCCTGCTCCCGTCACAGGCATCTGCGACTCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | TGGAACAGGACCGAGTGCCACCTGCTAACCCCAGAGTaGGCAGGCCACGTGTCCAGACACCTAGTGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WNRTECHLLTPE*AGHVSRHLVPV Trigger: CACCGGCACTAGGTGTCTGGACACGTGGCCTGCCAACTCTGGGGTTAGCAGGTGGCACTCGGTCCTGTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| CDS-3UTR GCA 90 bp | CGGGAGCAGGAAGTGGAGCAGTGCCAGGTGCCTAGGTCTCAGAGGGAAGAGCCTGAAGATGCGTGCCTCTaGCTCAGTGGCAGCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: REQEVEQCQVPRSQREEPEDACL*LSGSHV Trigger: CACATGGCTGCCACTGAGGCAGAGGCACGCATCTTC...AGGCTCTTCCCTCTGAGACCTAGGCACCTGGCACTGCTCCACTTCCTGCTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCACGACTGGGGGTGCAGAGGCCATGTGCCAGGATCTGAGGATTCCACTCACAGCACACATAGGTaGCGATGGCACTCACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSHDWGCRGHVPGSEDSTHSTHR*RWHSLG Trigger: TCCGAGTGAGTGCCATCGTCACCTATGTGTGCTGTG...AGTGGAATCCTCAGATCCTGGCACATGGCCTCTGCACCCCCAGTCGTGGGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | CTGAAGTGGAACAGGACCGAGTGCCACCTGCTAACCCCAGAGTTGGCAGGCCACTCATCCCCTAGGCCCTaGGGAACAGCAGGAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKWNRTECHLLTPELAGHSSPRP*GTAGAD Trigger: ATCTGCTCCTGCTGTTCCCCAGGGCCTAGGGGATGA...GTGGCCTGCCAACTCTGGGGTTAGCAGGTGGCACTCGGTCCTGTTCCACTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTGGATGCAGGACCAGCAGTGGTCCATCCTCGTCTATCTaGTTCCACCATCGAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VCTAILAARGLGCRTSSGPSSSI*FHHRRP Trigger: GGGTCTTCGATGGTGGAACCAGATAGACGAGGATGG...ACCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTTGAGTCGCAGATGCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCCAGTGCCTCTGCCTCAGTaGCAGCCATGTGGTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLESQMPVTGAGSGAVPVPLPQ*QPCGLQ Trigger: CTGCAAACCACATGGCTGCCACTGAGGCAGAGGCAC...TGGCACTGCTCCACTTCCTGCTCCCGTCACAGGCATCTGCGACTCAAGCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTTGAGTCGCAGATGCCTGTGACGGGAGCAGGAAGTGGAGCAGTGCCACCTGGGAAGTCCGTCTaGAACACTGTCTGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLESQMPVTGAGSGAVPPGKSV*NTVWDR Trigger: TCTGTCCCAGACAGTGTTTCAGACGGACTTCCCAGG...TGGCACTGCTCCACTTCCTGCTCCCGTCACAGGCATCTGCGACTCAAGCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCACAGCCATCTTAGCAGCCCGGGGGCTTGGATGCAGGACCAGCAGTGGCTTCTCGAAGTCACCTaGGAAGTCCGTCTGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CVHSHLSSPGAWMQDQQWLLEVT*EVRLKH Trigger: GTGTTTCAGACGGACTTCCCAGGTGACTTCGAGAAG...CCACTGCTGGTCCTGCATCCAAGCCCCCGGGCTGCTAAGATGGCTGTGCACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR TCA 90 bp | GAGCGGTTTCATCTGCCCCAAGTGCAAGGTGAGGGTCCCCAAGGCAGGCCTAAGCCACAAAGCTCTTGCTaGACCAGTCACAGCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: ERFHLPQVQGEGPQGRPKPQSSC*TSHSTH Trigger: ATGTGTGCTGTGACTGGTTCAGCAAGAGCTTTGTGG...CTTAGGCCTGCCTTGGGGACCCTCACCTTGCACTTGGGGCAGATGAAACCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | CGGGAGCAGGAAGTGGAGCAGTGCCAGGTGCCTAGGTCTCAGAGGGAAGAGCCTCACAATCCAGATCACTaGGCAGATGATGAGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: REQEVEQCQVPRSQREEPHNPDH*ADDETK Trigger: CTTGGTCTCATCATCTGCCCAGTGATCTGGATTGTG...AGGCTCTTCCCTCTGAGACCTAGGCACCTGGCACTGCTCCACTTCCTGCTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | GGACACAACTGGGGCATGTGTTGTGTCTCTCCACCTTaGCTGTCCTTGAATGGGGAGCCGCAGGCAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GHNWGMCCVSPP*LSLNGEPQAAI Trigger: TATGGCTGCCTGCGGCTCCCCATTCAAGGACAGCAAAGGTGGAGAGACACAACACATGCCCCAGTTGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTTTCTGCCTCACAGAAAGAGTCTCAGATCTTCCCTCCCACGACTGGGGTCATCCCCTAGGCCCTaGGGAACAGCAGGAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFLPHRKSLRSSLPRLGSSPRP*GTAGAD Trigger: ATCTGCTCCTGCTGTTCCCCAGGGCCTAGGGGATGA...CCCCAGTCGTGGGAGGGAAGATCTGAGACTCTTTCTGTGAGGCAGAAAGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | ATGCAGACTCCTGGGACCACTCAGCAGAGCAGTTCTTaGGGCCTAGAATCTGCCTTTGCCGCAGCAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MQTPGTTQQSSS*GLESAFAAAKQ Trigger: TTGCTTTGCTGCGGCAAAGGCAGATTCTAGGCCCAAAGAACTGCTCTGCTGAGTGGTCCCAGGAGTCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | AGATGCGTGCCTCTGCCTCAGTGGCAGCCATGTGGTTaGCAGAGACCTTTCTGGCTTCAAATATCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RCVPLPQWQPCG*QRPFWLQISSG Trigger: GCCACTGGATATTTGAAGCCAGAAAGGTCTCTGCAAACCACATGGCTGCCACTGAGGCAGAGGCACGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| 3UTR CAA 72 bp | GGAGATGTATGCCAGAAAGAAGGCACGCACTCAGCCTaGCCCACTTCTAGGTATGATCAAGCAGTTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GDVCQKEGTHSA*PTSRYDQAVPP Trigger: CGGAGGAACTGCTTGATCATACCTAGAAGTGGGCAAGGCTGAGTGCGTGCCTTCTTTCTGGCATACATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | CATCTTACAGAGGATGTAGCCGTAGAGGTTCGCAGCTaGGAGGGAAATGCCAGCAATCACAAGAGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLTEDVAVEVRS*EGNASNHKSQP Trigger: TGGCTGGCTCTTGTGATTGCTGGCATTTCCCTCCAAGCTGCGAACCTCTACGGCTACATCCTCTGTAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128288.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCACAGAAAGAGTCTCAGATCTTCCCTCCCACGACTGGGGGTGCAGAGATCGAAGACCCACCATaGGTCTTCCAGTTACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SASQKESQIFPPTTGGAEIEDPP*VFQLHS Trigger: AGAATGTAACTGGAAGACTCATGGTGGGTCTTCGAT...CTCTGCACCCCCAGTCGTGGGAGGGAAGATCTGAGACTCTTTCTGTGAGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGGTCCCCAAGGCAGGCCTAAGCACACCACTGTCACAGTGAGGAAACGAAGGAGAACAAGGTACTaGAGAAGAACACAATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGPQGRPKHTTVTVRKRRRTRY*RRTQSR Trigger: TCTGGATTGTGTTCTTCTTCAGTACCTTGTTCTCCT...TCGTTTCCTCACTGTGACAGTGGTGTGCTTAGGCCTGCCTTGGGGACCCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | AAACATGAGCGGTTTCATCTGCCCCAAGTGCAAGGTGAGGGTCCCCAAGGCAGGGCTTCAAATATCCAGTaGCTTTTCCCATCCTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KHERFHLPQVQGEGPQGRASNIQ*LFPSSS Trigger: AGACGAGGATGGGAAAAGCCACTGGATATTTGAAGC...CCTGCCTTGGGGACCCTCACCTTGCACTTGGGGCAGATGAAACCGCTCATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR TCA 90 bp | AGGCACAAAAGAGCAAGGCTTTTACAAGGGTCTCCTTTCCTCTGTCTCTTTAAGGGAGGAGGAGCACGGTaGCAAAGCAGCCCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHKRARLLQGSPFLCLFKGGGAR*QSSPQS Trigger: GCTTTGTGGGCTGCTTTGTCACCGTGCTCCTCCTCC...CTTAAAGAGACAGAGGAAAGGAGACCCTTGTAAAAGCCTTGCTCTTTTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR GCA 90 bp | TGGGGACAGCACTGTCACTGTGCTGAGGCTGAGAATGTAGGCCAAATGCTTATGCAGCTTGGAGGGAAATaGCAGCAATCACAAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGQHCHCAEAENVGQMLMQLGGK*QQSQEP Trigger: TGGCTCTTGTGATTGCTGGCATTTCCCTCCAAGCTG...CATAAGCATTTGGCCTACATTCTCAGCCTCAGCACAGTGACAGTGCTGTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | AAGCCACATGACTATTGGAACCACATGTCTATGCCACACATAGACAGGAGCACCACTCGGAAGAACAGGTaGAAGAAGGTAGCCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPHDYWNHMSMPHIDRSTTRKNR*KKVARG Trigger: CCCCCTGGCTACCTTCTTCCACCTGTTCTTCCGAGT...GGTGCTCCTGTCTATGTGTGGCATAGACATGTGGTTCCAATAGTCATGTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CCA 90 bp | AAGCCTAAGATGATGCAGATAGCACCGCTGGGCAAGCACCTTCTCCCTATTGACTCAGTGGCAGCCATGTaGTTTGCAGAGACCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPKMMQIAPLGKHLLPIDSVAAM*FAETFL Trigger: CAGAAAGGTCTCTGCAAACCACATGGCTGCCACTGA...GTCAATAGGGAGAAGGTGCTTGCCCAGCGGTGCTATCTGCATCATCTTAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | ATCATTGCTGAGGAAGGGACACAACTGGGGCATGTGTaGTGTCTCTCCACCTTTGCTGTCCTTGAATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIAEEGTQLGHV*CLSTFAVLEWG Trigger: TCCCCATTCAAGGACAGCAAAGGTGGAGAGACACAACACATGCCCCAGTTGTGTCCCTTCCTCAGCAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | CCTAGAATCTGCCTTTGCCGCAGCAAAGCAACATCATaGCTGAGGAAGGGACACAACTGGGGCATGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRICLCRSKATS*LRKGHNWGMCC Trigger: ACAACACATGCCCCAGTTGTGTCCCTTCCTCAGCAATGATGTTGCTTTGCTGCGGCAAAGGCAGATTCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| 3UTR CAA 72 bp | GAAACGACAGGGATGGTTTCTGCTTTTCCTGCTGTTTaGGGAAGGGAGGGTCTCCATCAAGCCCTCTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETTGMVSAFPAV*GREGLHQALYY Trigger: GTAGTAGAGGGCTTGATGGAGACCCTCCCTTCCCAAAACAGCAGGAAAAGCAGAAACCATCCCTGTCGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR GCA 90 bp | AGGCACAAAAGAGCAAGGCTTTTACAAGGGTCTCCTTTCCTCTGTCTCTTTAAGGACCAAGCCAGAAGATaGGTGCCTCTGCCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHKRARLLQGSPFLCLFKDQARR*VPLPQW Trigger: CCACTGAGGCAGAGGCACGCATCTTCTGGCTTGGTC...CTTAAAGAGACAGAGGAAAGGAGACCCTTGTAAAAGCCTTGCTCTTTTGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS-3UTR CAA 90 bp | AAGCCACATGACTATTGGAACCACATGTCTATGCCACACATAGACAGGAGCACCAGGGGGTGCCTGATCTaGGCCTTTCTAAAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPHDYWNHMSMPHIDRSTRGCLI*AFLKAS Trigger: GCTGGCCTTTAGAAAGGCCAAGATCAGGCACCCCCT...GGTGCTCCTGTCTATGTGTGGCATAGACATGTGGTTCCAATAGTCATGTGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||
| CDS CCA 90 bp | TTTCTGGCTTCAAATATCCAGTGGCTTTTCCCATCCTCGTCTATCTaGTTCCACCATCGAAGACCCACCATGAGTCTTCCAGTTACATTC | + |
|
Preference number: 5 (lower is better) Translates to: FLASNIQWLFPSSSI*FHHRRPTMSLPVTF Trigger: GAATGTAACTGGAAGACTCATGGTGGGTCTTCGATGGTGGAACCAGATAGACGAGGATGGGAAAAGCCACTGGATATTTGAAGCCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051118.7 |
||