RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TUT7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035248

Ensembl transcript IDs: ENSMUST00000071703.6, ENSMUST00000224480.2, ENSMUST00000225179.2, ENSMUST00000225241.2, ENSMUST00000225576.2, ENSMUST00000225987.2

Found 412 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTCAACTGTTACGTTGAAGCCTGATCTGTGTCACTGTGTCCTGTaGCATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGC +
Preference number: 1 (lower is better)
Translates to: PSTVTLKPDLCHCVL*HEPNFPSGHGHLSG
Trigger: GCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAACGTAACAGTTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR TCA 90 bp TTCCCTCATGATTCCTGCTGGGTCCTCTTCACTGAGGCTCTCCCCTaGGTCATATATTTACTGGAAAGGCTACCTGACTGGGGACTCAAA +
Preference number: 1 (lower is better)
Translates to: FPHDSCWVLFTEALP*VIYLLERLPDWGLK
Trigger: TTTGAGTCCCCAGTCAGGTAGCCTTTCCAGTAAATATATGACTCAGGGGAGAGCCTCAGTGAAGAGGACCCAGCAGGAATCATGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR TCA 90 bp AGCATAGAACCGCAGCAATTCCACCCAGAGTTGCCCGACTGGCACTaGAGGCTGATGCTTTATATTAAATGTCAATGGCACCTCATAGGG +
Preference number: 1 (lower is better)
Translates to: SIEPQQFHPELPDWH*RLMLYIKCQWHLIG
Trigger: CCCTATGAGGTGCCATTGACATTTAATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGGTTCTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR CCA 90 bp GACTGGGCTAGGAGGCTTTGTGAGGTTGGGTTTTGTAACTTTGTGTaGAAGAGCGAAATATTTATATGTTGTCCTCAAACAATGGAGTAT +
Preference number: 1 (lower is better)
Translates to: DWARRLCEVGFCNFV*KSEIFICCPQTMEY
Trigger: ATACTCCATTGTTTGAGGACAACATATAAATATTTCGCTCTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR CCA 90 bp ACTTTGTGTGGAAGAGCGAAATATTTATATGTTGTCCTCAAACAATaGAGTATATACTCAAACACAGGCTGGTTATTCAGGGTCCTTGCC +
Preference number: 1 (lower is better)
Translates to: TLCGRAKYLYVVLKQ*SIYSNTGWLFRVLA
Trigger: GGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTATATACTCCATTGTTTGAGGACAACATATAAATATTTCGCTCTTCCACACAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR CCA 90 bp AACAGCATGGGCACCCTATTAAGGAGATGTGTACTGTCAGCGCTTTaGTTGACTTTTCTAATGACTCATAAGAAAATAATGTGGATAAAA +
Preference number: 1 (lower is better)
Translates to: NSMGTLLRRCVLSAL*LTFLMTHKKIMWIK
Trigger: TTTTATCCACATTATTTTCTTATGAGTCATTAGAAAAGTCAACCAAAGCGCTGACAGTACACATCTCCTTAATAGGGTGCCCATGCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGTTACGTTGAAGCCTaGTCTGTGTCACTGTGTCCT +
Preference number: 2 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPCYVEA*SVSLCP
Trigger: AGGACACAGTGACACAGATCAGGCTTCAACGTAACA...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR-3UTR TCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCTGGGTCCTCTTCACTaGGGCTCTCCCCTGAGTCAT +
Preference number: 2 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWLGPLH*GSPLSH
Trigger: ATGACTCAGGGGAGAGCCTCAGTGAAGAGGACCCAG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR TCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATCCTCAACTGTTACGTTaGAGCCTGATCTGTGTCACT +
Preference number: 2 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYPQLLR*SLICVT
Trigger: AGTGACACAGATCAGGCTTCAACGTAACAGTTGAGG...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR-3UTR TCA 90 bp TCCAAACTGCAGCTGCCCAACTCACAAAAATGTGGCTCCACATCACCCCAGAATCAGGGCACCACACAGTaGGACACTGTCTCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: SKLQLPNSQKCGSTSPQNQGTTQ*DTVSKR
Trigger: CCTTTTGGAGACAGTGTCTCACTGTGTGGTGCCCTG...ATTCTGGGGTGATGTGGAGCCACATTTTTGTGAGTTGGGCAGCTGCAGTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR-3UTR GCA 90 bp TGCACACCCCAGACCCGGTGCACAGCTATCAAAGGGGAACAGCATGGGCACCCTGGTGCTTGCATTCCATaGTATCATTTCTACAATGAG +
Preference number: 2 (lower is better)
Translates to: CTPQTRCTAIKGEQHGHPGACIP*YHFYNE
Trigger: CTCATTGTAGAAATGATAGCATGGAATGCAAGCACC...AGGGTGCCCATGCTGTTCCCCTTTGATAGCTGTGCACCGGGTCTGGGGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR GCA 90 bp AGAGCTCTCCTGGTGGGCTGGGATGTGCACACCTCCTGTCTTCTCCTTTGCTGGTTTATCAATATTTGTTaGTTGGGGTTCTGGGCCACC +
Preference number: 2 (lower is better)
Translates to: RALLVGWDVHTSCLLLCWFINIC*LGFWAT
Trigger: GGTGGCCCAGAACCCCAAGCAACAAATATTGATAAA...CCAGCAAAGGAGAAGACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR-3UTR CCA 90 bp AATGGCCAGGGTGACAGGATGCATCCCCAATTTCAGTTTCGATTTCTGTCCCACATCTCTGAGGTTAAGTaGCCACCCTCCTCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: NGQGDRMHPQFQFRFLSHISEVK*PPSSSP
Trigger: GGGAGAGGAGGAGGGTGGCCACTTAACCTCAGAGAT...GTGGGACAGAAATCGAAACTGAAATTGGGGATGCATCCTGTCACCCTGGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR CAA 90 bp ATAGAGAAATCCAAAGCCCAGAAACCACCAATGAACACTGTTCCCTaGTCAGGATGCCAGGTCCTGCAGACTGAGGTAATGGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: IEKSKAQKPPMNTVP*SGCQVLQTEVMARV
Trigger: CACCCTGGCCATTACCTCAGTCTGCAGGACCTGGCATCCTGACAAGGGAACAGTGTTCATTGGTGGTTTCTGGGCTTTGGATTTCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR-3UTR GCA 90 bp TATATGCCTCTCGTGAGTCTCCCTCGTTGTGCCAGTGTCCTTAGCAAGCTCTCTGAGTGGCATTTCCAGTaGTGCAGTTCCTTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: YMPLVSLPRCASVLSKLSEWHFQ*CSSFPH
Trigger: ATGAGGGAAGGAACTGCAGCACTGGAAATGCCACTC...AGAGAGCTTGCTAAGGACACTGGCACAACGAGGGAGACTCACGAGAGGCATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR TCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGCACCGAGGCCCACACTaGCAGGTGCTTGCATTCCAT +
Preference number: 2 (lower is better)
Translates to: INSLERAPVRPEGCQSNLHRGPH*QVLAFH
Trigger: ATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTG...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR-3UTR GCA 90 bp TCCAAACTGCAGCTGCCCAACTCACAAAAATGTGGCTCCACATCACCCCAGAATCTACTCGGGGTCCTGTaGCAGTTAGTTTGGTTAAAC +
Preference number: 2 (lower is better)
Translates to: SKLQLPNSQKCGSTSPQNLLGVL*QLVWLN
Trigger: GTTTAACCAAACTAACTGGCACAGGACCCCGAGTAG...ATTCTGGGGTGATGTGGAGCCACATTTTTGTGAGTTGGGCAGCTGCAGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR-3UTR TCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCACTGGAAAGGCTACCTaGCTGGGGACTCAAAAATAT +
Preference number: 2 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSTGKAT*LGTQKY
Trigger: ATATTTTTGAGTCCCCAGTCAGGTAGCCTTTCCAGT...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR TCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGACAGTTCCTTCCCTCATaGTTCCTGCTGGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: RGLTPLVSSTLFLECFERQFLPS*FLLGPL
Trigger: AAGAGGACCCAGCAGGAATCATGAGGGAAGGAACTG...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR GCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAATGGCATTTCCAGTGCTaGAGTTCCTTCCCTCATGAT +
Preference number: 2 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQWHFQC*SSFPHD
Trigger: ATCATGAGGGAAGGAACTGCAGCACTGGAAATGCCA...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR CCA 90 bp TCCAAACTGCAGCTGCCCAACTCACAAAAATGTGGCTCCACATCACCCCAGAATACTGTGAAGCCAGTCTaGTCTACAGAGCAAATTCCA +
Preference number: 2 (lower is better)
Translates to: SKLQLPNSQKCGSTSPQNTVKPV*STEQIP
Trigger: TGGAATTTGCTCTGTAGACCAGACTGGCTTCACAGT...ATTCTGGGGTGATGTGGAGCCACATTTTTGTGAGTTGGGCAGCTGCAGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR-3UTR GCA 90 bp CGCTTTTTGGGCCAGTCCTTTGATTCCCGTGATATTAATTCTTTGACACGAATAAATTCCACCCAGAGTTaGCCGACTGGCACTGAAGGC +
Preference number: 2 (lower is better)
Translates to: RFLGQSFDSRDINSLTRINSTQS*PTGTEG
Trigger: GCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATT...TATTCGTGTCAAAGAATTAATATCACGGGAATCAAAGGACTGGCCCAAAAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR-3UTR TCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGACCTCAACTGTTACGTTaGAGCCTGATCTGTGTCACT +
Preference number: 2 (lower is better)
Translates to: RGLTPLVSSTLFLECFERPQLLR*SLICVT
Trigger: AGTGACACAGATCAGGCTTCAACGTAACAGTTGAGG...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR-3UTR GCA 90 bp TCCAAACTGCAGCTGCCCAACTCACAAAAATGTGGCTCCACATCACCCCAGAATCTTGTGATGGTCCAATaGATGAAATATGTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: SKLQLPNSQKCGSTSPQNLVMVQ*MKYVEA
Trigger: AGCCTCAACATATTTCATGCATTGGACCATCACAAG...ATTCTGGGGTGATGTGGAGCCACATTTTTGTGAGTTGGGCAGCTGCAGTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR-3UTR CCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCCTCATGATTCCTGCTaGGTCCTCTTCACTGAGGCT +
Preference number: 2 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALPHDSC*VLFTEA
Trigger: AGCCTCAGTGAAGAGGACCCAGCAGGAATCATGAGG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR CAA 90 bp CAGGTGACTGGGCTAGGAGGCTTTGTGAGGTTGGGTTTTGTAACTTaGTGTGGAAGAGCGAAATATTTATATGTTGTCCTCAAACAATGG +
Preference number: 2 (lower is better)
Translates to: QVTGLGGFVRLGFVT*CGRAKYLYVVLKQW
Trigger: CCATTGTTTGAGGACAACATATAAATATTTCGCTCTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAGTCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR CAA 90 bp AATCTAGTTAAGGCTAGCCCTGACTACATGAAGCAGCAGCAGATTTaGATTCTTCTGAAAGGGAACAGCACTGCTTTTCTCTGCATTACG +
Preference number: 2 (lower is better)
Translates to: NLVKASPDYMKQQQI*ILLKGNSTAFLCIT
Trigger: CGTAATGCAGAGAAAAGCAGTGCTGTTCCCTTTCAGAAGAATCAAAATCTGCTGCTGCTTCATGTAGTCAGGGCTAGCCTTAACTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR-3UTR TCA 90 bp TCCTCAGTGGTATTCTTAAGAGTAACTAGCTGTGCTCTGCAGTCACCTGAGGTTACTGGCACTGAAGGCTaGTGCTTTATATTAAATGTC +
Preference number: 2 (lower is better)
Translates to: SSVVFLRVTSCALQSPEVTGTEG*CFILNV
Trigger: GACATTTAATATAAAGCATCAGCCTTCAGTGCCAGT...AACCTCAGGTGACTGCAGAGCACAGCTAGTTACTCTTAAGAATACCACTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR-3UTR CCA 90 bp TCCTCAGTGGTATTCTTAAGAGTAACTAGCTGTGCTCTGCAGTCACCTGAGGTTTATATTAAATGTCAATaGCACCTCATAGGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: SSVVFLRVTSCALQSPEVYIKCQ*HLIGLL
Trigger: CAACAGCCCTATGAGGTGCCATTGACATTTAATATA...AACCTCAGGTGACTGCAGAGCACAGCTAGTTACTCTTAAGAATACCACTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR-3UTR TCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCACTGAGGCTCTCCCCTaGGTCATATATTTACTGGAA +
Preference number: 2 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALTEALP*VIYLLE
Trigger: TTCCAGTAAATATATGACTCAGGGGAGAGCCTCAGT...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR-3UTR CCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCGAAAGGCTACCTGACTaGGGACTCAAAAATATGGTT +
Preference number: 2 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALERLPD*GLKNMV
Trigger: AACCATATTTTTGAGTCCCCAGTCAGGTAGCCTTTC...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR CAA 90 bp ATACGCTTTTTGGGCCAGTCCTTTGATTCCCGTGATATTAATTCTTaGACACGAATACTGATCACTAAATCAGCCAGATTAAACTCTAAA +
Preference number: 2 (lower is better)
Translates to: IRFLGQSFDSRDINS*TRILITKSARLNSK
Trigger: TTTAGAGTTTAATCTGGCTGATTTAGTGATCAGTATTCGTGTCAAAGAATTAATATCACGGGAATCAAAGGACTGGCCCAAAAAGCGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR-3UTR GCA 90 bp GTGAGGTTGGGTTTTGTAACTTTGTGTGGAAGAGCGAAATATTTATATGTTGTCGTTATTCAGGGTCCTTaGCACATTTCTTTTAACAGA +
Preference number: 2 (lower is better)
Translates to: VRLGFVTLCGRAKYLYVVVIQGP*HISFNR
Trigger: TCTGTTAAAAGAAATGTGGCAAGGACCCTGAATAAC...GACAACATATAAATATTTCGCTCTTCCACACAAAGTTACAAAACCCAACCTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR GCA 72 bp CCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTaGTGCAGTTCCTTCCCTCATGATTCCTGCTGGGTC +
Preference number: 3 (lower is better)
Translates to: PKWPRTPEWHFQ*CSSFPHDSCWV
Trigger: GACCCAGCAGGAATCATGAGGGAAGGAACTGCAGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR TCA 72 bp CACTGTTCCCTTGTCAGGATGCCAGGTCCTGCAGACTaGGGTAATGGCCAGGGTGACAGGATGCATCCCCAA +
Preference number: 3 (lower is better)
Translates to: HCSLVRMPGPAD*GNGQGDRMHPQ
Trigger: TTGGGGATGCATCCTGTCACCCTGGCCATTACCTCAGTCTGCAGGACCTGGCATCCTGACAAGGGAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR TCA 72 bp GCCATGAACCTAATTTCCCAAGTGGCCACGGACACCTaGGTGGCATTTCCAGTGCTGCAGTTCCTTCCCTCA +
Preference number: 3 (lower is better)
Translates to: AMNLISQVATDT*VAFPVLQFLPS
Trigger: TGAGGGAAGGAACTGCAGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR GCA 72 bp CAGAAACCACCAATGAACACTGTTCCCTTGTCAGGATaGCAGGTCCTGCAGACTGAGGTAATGGCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: QKPPMNTVPLSG*QVLQTEVMARV
Trigger: CACCCTGGCCATTACCTCAGTCTGCAGGACCTGGCATCCTGACAAGGGAACAGTGTTCATTGGTGGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR TCA 72 bp GATTCCTGCTGGGTCCTCTTCACTGAGGCTCTCCCCTaGGTCATATATTTACTGGAAAGGCTACCTGACTGG +
Preference number: 3 (lower is better)
Translates to: DSCWVLFTEALP*VIYLLERLPDW
Trigger: CCAGTCAGGTAGCCTTTCCAGTAAATATATGACTCAGGGGAGAGCCTCAGTGAAGAGGACCCAGCAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
3UTR GCA 72 bp GTTACGTTGAAGCCTGATCTGTGTCACTGTGTCCTGTaGCATGAACCTAATTTCCCAAGTGGCCACGGACAC +
Preference number: 3 (lower is better)
Translates to: VTLKPDLCHCVL*HEPNFPSGHGH
Trigger: GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAACGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR TCA 72 bp CCGCAGCAATTCCACCCAGAGTTGCCCGACTGGCACTaGAGGCTGATGCTTTATATTAAATGTCAATGGCAC +
Preference number: 3 (lower is better)
Translates to: PQQFHPELPDWH*RLMLYIKCQWH
Trigger: GTGCCATTGACATTTAATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR-3UTR CAA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCCCTCAACTGTTACGTaGAAGCCTGATCTGTGTCAC +
Preference number: 3 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGPSTVT*KPDLCH
Trigger: GTGACACAGATCAGGCTTCAACGTAACAGTTGAGGG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR TCA 72 bp GCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTaGTTGGCAGAGACAGCAGCCTCTTTGATCTTCAGA +
Preference number: 3 (lower is better)
Translates to: APVRPEGCQSNL*LAETAASLIFR
Trigger: TCTGAAGATCAAAGAGGCTGCTGTCTCTGCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR-3UTR CAA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCACACTGACAGGTGCTaGCATTCCATGCTATCATTT +
Preference number: 3 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGHTDRC*HSMLSF
Trigger: AAATGATAGCATGGAATGCAAGCACCTGTCAGTGTG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR-3UTR CAA 90 bp AATGGCCAGGGTGACAGGATGCATCCCCAATTTCAGTTTCGATTTCTGTCCCACAATAAGTCTGGACAATaGCATCCTCTCCAAACTGCA +
Preference number: 3 (lower is better)
Translates to: NGQGDRMHPQFQFRFLSHNKSGQ*HPLQTA
Trigger: TGCAGTTTGGAGAGGATGCAATTGTCCAGACTTATT...GTGGGACAGAAATCGAAACTGAAATTGGGGATGCATCCTGTCACCCTGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR CCA 72 bp GAAGAAAAAGCATTAAGGATCACTGTGAAGCCAGTCTaGTCTACAGAGCAAATTCCACACCAGGGCACCACA +
Preference number: 3 (lower is better)
Translates to: EEKALRITVKPV*STEQIPHQGTT
Trigger: TGTGGTGCCCTGGTGTGGAATTTGCTCTGTAGACCAGACTGGCTTCACAGTGATCCTTAATGCTTTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
3UTR-3UTR CAA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGCCCTCAACTGTTACGTaGAAGCCTGATCTGTGTCAC +
Preference number: 3 (lower is better)
Translates to: QVLAFHAIISTMSHEECLPSTVT*KPDLCH
Trigger: GTGACACAGATCAGGCTTCAACGTAACAGTTGAGGG...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR TCA 72 bp GACAGGTGCTTGCATTCCATGCTATCATTTCTACAATaGGCCATGAAGAATGCTTGTAGACCCTATGTACAG +
Preference number: 3 (lower is better)
Translates to: DRCLHSMLSFLQ*AMKNACRPYVQ
Trigger: CTGTACATAGGGTCTACAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR GCA 72 bp CTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTaGTTTGAAAGAACTAAAATCCATGACGCTGTAGTC +
Preference number: 3 (lower is better)
Translates to: LTPLVSSTLFLE*FERTKIHDAVV
Trigger: GACTACAGCGTCATGGATTTTAGTTCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR TCA 72 bp GCTTGCATTCCATGCTATCATTTCTACAATGAGCCATaGAGAATGCTTGTAGACCCTATGTACAGCAGTATA +
Preference number: 3 (lower is better)
Translates to: ACIPCYHFYNEP*RMLVDPMYSSI
Trigger: TATACTGCTGTACATAGGGTCTACAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR CCA 72 bp GTCCTCAAACAATGGAGTATATACTCAAACACAGGCTaGTTATTCAGGGTCCTTGCCACATTTCTTTTAACA +
Preference number: 3 (lower is better)
Translates to: VLKQWSIYSNTG*LFRVLATFLLT
Trigger: TGTTAAAAGAAATGTGGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTATATACTCCATTGTTTGAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR CCA 72 bp AGGAGGCTTTGTGAGGTTGGGTTTTGTAACTTTGTGTaGAAGAGCGAAATATTTATATGTTGTCCTCAAACA +
Preference number: 3 (lower is better)
Translates to: RRLCEVGFCNFV*KSEIFICCPQT
Trigger: TGTTTGAGGACAACATATAAATATTTCGCTCTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR GCA 72 bp GCAGCAGATTTTGATTCTTCTGAAAGGGAACAGCACTaGTTTTCTCTGCATTACGATTCTCTAAATTTCTAT +
Preference number: 3 (lower is better)
Translates to: AADFDSSEREQH*FSLHYDSLNFY
Trigger: ATAGAAATTTAGAGAATCGTAATGCAGAGAAAAGCAGTGCTGTTCCCTTTCAGAAGAATCAAAATCTGCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAGGCATCCTCCTCACCTaGCCCAGCATACCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPGILLT*PSIPAV
Trigger: GACAGCAGGTATGCTGGGTCAGGTGAGGAGGATGCC...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATCCAGAGCTCTCCTGGTaGGCTGGGATGTGCACACCT +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYPELSW*AGMCTP
Trigger: AGGTGTGCACATCCCAGCCCACCAGGAGAGCTCTGG...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAATGACAAGCTGCCTCTaGACGCGTCACCGATGTCAC +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPMTSCL*TRHRCH
Trigger: GTGACATCGGTGACGCGTCCAGAGGCAGCTTGTCAT...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGGGACAGTCCTTCATaGAGTGCCCGATTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPWDSPS*SARFSH
Trigger: GTGGGAAAATCGGGCACTTCATGAAGGACTGTCCCA...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACTTTCTGTGGGCGTCCTaGGGAGCTTCTCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHFLWAS*GASPGP
Trigger: TGGGCCGGGAGAAGCTCCTCAGGACGCCCACAGAAA...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATCTGGGTCCTCTTCACTaGGGCTCTCCCCTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYLGPLH*GSPLSH
Trigger: ATGACTCAGGGGAGAGCCTCAGTGAAGAGGACCCAG...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACGCCTTCTCACAGCTCTaGAGCCTCTCCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHAFSQL*SLSPPA
Trigger: GGCAGGAGGGGAGAGGCTGCAGAGCTGTGAGAAGGC...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACAGCCGTTCCTCAGCCTaGTGGAGGCCCAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHSRSSA*WRPNSS
Trigger: GGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCT...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATCGTTCTAGTCCTCCGTaGCTTACGAGGTCTGGACCG +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYRSSPP*LTRSGP
Trigger: CGGTCCAGACCTCGTAAGCCACGGAGGACTAGAACG...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAGCTTGGTCTTCCTTCTaGCTTCCTCGTTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPAWSSF*LPRCHF
Trigger: GAAGTGACAACGAGGAAGTCAGAAGGAAGACCAAGC...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAGATATTCCTCAACCCTaGGTGCTTTCTGAGGACTCG +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPDIPQP*VLSEDS
Trigger: CGAGTCCTCAGAAAGCACTCAGGGTTGAGGAATATC...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TGCACACCCCAGACCCGGTGCACAGCTATCAAAGGGGAACAGCATGGGCACCCTTGCCTGGAGAGCCTTTaGACTGTGGGCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CTPQTRCTAIKGEQHGHPCLESL*TVGIPF
Trigger: AAAAGGAATGCCCACAGTTCAAAGGCTCTCCAGGCA...AGGGTGCCCATGCTGTTCCCCTTTGATAGCTGTGCACCGGGTCTGGGGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATTCCTGTCTTCTCCTTTaGTGGGCTTCCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYSCLLL*WASHLL
Trigger: GAGGAGGTGGGAAGCCCAGCAAAGGAGAAGACAGGA...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATGCAGACCACACAGGCTaGCACAGTTCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYADHTG*HSSAVL
Trigger: CAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGC...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TATATGCCTCTCGTGAGTCTCCCTCGTTGTGCCAGTGTCCTTAGCAAGCTCTCTCTTGGGTGTCAGGGGTaGCAACGGCTCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: YMPLVSLPRCASVLSKLSLGCQG*QRLQLD
Trigger: GTCCAGCTGGAGCCGTTGCCACCCCTGACACCCAAG...AGAGAGCTTGCTAAGGACACTGGCACAACGAGGGAGACTCACGAGAGGCATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACCGATGCAGTCTCTCTTaGGCCGTTCCTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHRCSLS*AVPQPA
Trigger: AGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCG...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp AATGGCCAGGGTGACAGGATGCATCCCCAATTTCAGTTTCGATTTCTGTCCCACGCCTTCTCACAGCTCTaGAGCCTCTCCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: NGQGDRMHPQFQFRFLSHAFSQL*SLSPPA
Trigger: GGCAGGAGGGGAGAGGCTGCAGAGCTGTGAGAAGGC...GTGGGACAGAAATCGAAACTGAAATTGGGGATGCATCCTGTCACCCTGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR CCA 90 bp AGAGCTCTCCTGGTGGGCTGGGATGTGCACACCTCCTGTCTTCTCCTTTGCTGGCAGAGCAAACACATATaGTGGCAGGCCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RALLVGWDVHTSCLLLCWQSKHI*WQASFF
Trigger: GAAGAAGGAGGCCTGCCACCATATGTGTTTGCTCTG...CCAGCAAAGGAGAAGACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR TCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACAGTGTAAGCGTAGGATaGCAAGCTGCCTCTGGACGC +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHSVSVG*QAASGR
Trigger: GCGTCCAGAGGCAGCTTGTCATCCTACGCTTACACT...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACAATTCCACCCAGAGTTaGCCGACTGGCACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHNSTQS*PTGTEG
Trigger: GCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATT...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACAGGCTGCCACAGTTCTaGAGTTCTGGGTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHRLPQF*SSGCLL
Trigger: CAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCT...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATACAGGGACCCGGGCATaGAAATCAGCATCAACATCA +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYTGTRA*KSASTS
Trigger: TGATGTTGATGCTGATTTCCATGCCCGGGTCCCTGT...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CCA 90 bp AGAGCTCTCCTGGTGGGCTGGGATGTGCACACCTCCTGTCTTCTCCTTTGCTGGCTGTTAGGTGCTTTGTaGTCAGCCAAGCGTTTTCGT +
Preference number: 4 (lower is better)
Translates to: RALLVGWDVHTSCLLLCWLLGAL*SAKRFR
Trigger: ACGAAAACGCTTGGCTGACCACAAAGCACCTAACAG...CCAGCAAAGGAGAAGACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR CCA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTCAACTGACCTCTGCCTaGACACAGCCAGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HEPNFPSGHGHLSGISSAQLTSA*TQPELS
Trigger: GGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTG...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCCGGAAGCTCTGCTGTaGCATCCTCCAAACCCTCAC +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWPEALL*HPPNPH
Trigger: GTGAGGGTTTGGAGGATGCCACAGCAGAGCTTCCGG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAACTTGGGTGTCAGGGGTaGCAACGGCTCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQLGCQG*QRLQLD
Trigger: GTCCAGCTGGAGCCGTTGCCACCCCTGACACCCAAG...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAAGAGTACCTTTGGTTTaGGGTATCTTCCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPRVPLV*GIFLVS
Trigger: AGAGACCAGGAAGATACCCCAAACCAAAGGTACTCT...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCGACAGCTGCCCTCACTaGCTTGGCTTTCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSDSCPH*LGFRSC
Trigger: GCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGCTGTC...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCCCAAACCCTCACAACTaGCCTCTGCCTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSPNPHN*PLPGHS
Trigger: GCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTTGG...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTTACCTGCTGTCCACCTaGTGCTCATTAGCAACCCCC +
Preference number: 4 (lower is better)
Translates to: HEPNFPSGHGHLSGISSAYLLST*CSLATP
Trigger: GGGGGTTGCTAATGAGCATCAGGTGGACAGCAGGTA...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCACAAGGTCACTCTGTTTaGACCCAAATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPQGHSV*TQIHFW
Trigger: CCAAAAATGGATTTGGGTTCAAACAGAGTGACCTTG...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACTCTGGGGTCAATGGCTaGGTATGCAGACAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHSGVNG*VCRQEP
Trigger: AGGCTCTTGTCTGCATACTCAGCCATTGACCCCAGA...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGTCACACATCTTTGTaGACACTTTCATGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPCHTSL*TLSWCS
Trigger: GCTACACCATGAAAGTGTTCACAAAGATGTGTGACA...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAGCCCAGGTCGACAGCTaGCCTCACTGGCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQAQVDS*PHWLGF
Trigger: AAAGCCAAGCCAGTGAGGGCAGCTGTCGACCTGGGC...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCGTTCCTCAGCCTGCTaGAGGCCCAACAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGRSSAC*RPNSSL
Trigger: CAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCCAGAGCTCTCCTGGTaGGCTGGGATGTGCACACCT +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGPELSW*AGMCTP
Trigger: AGGTGTGCACATCCCAGCCCACCAGGAGAGCTCTGG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGGCAGCACCTGTCATTTaGGGCCAGTTCTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWAAPVI*GQFSLS
Trigger: ACTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGC...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACTTTGGGGTATCTTCCTaGTCTCTCCGTCGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHFGVSS*SLRRLT
Trigger: AGTGAGGCGACGGAGAGACCAGGAAGATACCCCAAA...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp GATCACTGTGAAGCCAGTCTGGTCTACAGAGCAAATTCCACACCAGGGCACCACCTGCTGAGGTCTTTCTaGAACAGCCTTCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: DHCEASLVYRANSTPGHHLLRSF*NSLLTA
Trigger: AGCTGTGAGAAGGCTGTTTCAGAAAGACCTCAGCAG...GTGGTGCCCTGGTGTGGAATTTGCTCTGTAGACCAGACTGGCTTCACAGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR TCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGCGGGGGCAGTGTGGTaGGCAATTCTTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSAGAVW*AILPPA
Trigger: AGCAGGAGGAAGAATTGCTCACCACACTGCCCCCGC...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACTTCTCTGTAAGGGTCTaGAACACAGGTGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHFSVRV*NTGDWA
Trigger: AGCCCAGTCACCTGTGTTTCAGACCCTTACAGAGAA...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAACCAAACCCTCACAACTaGCCTCTGCCTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQPNPHN*PLPGHS
Trigger: GCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTTGG...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACGCTTGGTCTTCCTTCTaGCTTCCTCGTTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHAWSSF*LPRCHF
Trigger: GAAGTGACAACGAGGAAGTCAGAAGGAAGACCAAGC...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAATATGTTCACGAGCCTaGTCTTCTACAATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPICSRA*SSTIVG
Trigger: TCCAACTATTGTAGAAGATCAGGCTCGTGAACATAT...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACCTCTCTCCAGCTGTCTaGATTACCAGCGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHLSPAV*ITSEFI
Trigger: GATGAACTCGCTGGTAATGCAGACAGCTGGAGAGAG...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATAAGCATCGCACAGTTTaGAGGTATACTTTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYKHRTV*RYTLLS
Trigger: CGACAGCAAAGTATACCTGCAAACTGTGCGATGCTT...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCACCTGTCCCTTCTTTaGTGCAGTCTCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWHLSLL*CSLFGC
Trigger: GCACCCAAAGAGACTGCAGCAAAGAAGGGACAGGTG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAATCTTGAGCCACAGCTaGATTTCCCAGTTTATCAAT +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPILSHS*ISQFIN
Trigger: ATTGATAAACTGGGAAATGCAGCTGTGGCTCAAGAT...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCAGGCTGCCACAGTTCTaGAGTTCTGGGTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSRLPQF*SSGCLL
Trigger: CAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCT...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCTCGCTTACACAAGCTaGACACTACTGTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWLAYTS*TLLWGT
Trigger: AGTCCCCCACAGTAGTGTGCAGCTTGTGTAAGCGAG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GATCACTGTGAAGCCAGTCTGGTCTACAGAGCAAATTCCACACCAGGGCACCACCATACAGTCCTTTCCTaGGGGTGTTCCCATAGTTCC +
Preference number: 4 (lower is better)
Translates to: DHCEASLVYRANSTPGHHHTVLS*GCSHSS
Trigger: GGAACTATGGGAACACCCCCAGGAAAGGACTGTATG...GTGGTGCCCTGGTGTGGAATTTGCTCTGTAGACCAGACTGGCTTCACAGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR CCA 90 bp GCAGCAATTCCACCCAGAGTTGCCCGACTGGCACTGAAGGCTGATGCTTTATATAGCAAACACATATGGTaGCAGGCCTCCTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: AAIPPRVARLALKADALYSKHIW*QASFFG
Trigger: CCCGAAGAAGGAGGCCTGCCACCATATGTGTTTGCT...ATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR CCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCCTCTTTTGCTGAGCTaGTGTCCCCTGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWPLLLS*CPLCCC
Trigger: ACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGCTCTCCTGGTGGGCTaGGATGTGCACACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSALLVG*DVHTSC
Trigger: ACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGC...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCAACTGACCTCTGCCTaGACACAGCCAGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGQLTSA*TQPELS
Trigger: GGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAACCGGAAGCTCTGCTGTaGCATCCTCCAAACCCTCAC +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQPEALL*HPPNPH
Trigger: GTGAGGGTTTGGAGGATGCCACAGCAGAGCTTCCGG...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATCTGCTGCTTAAACCTTaGTCATCAGTGCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYLLLKP*SSVLKG
Trigger: TCCTTTGAGCACTGATGACCAAGGTTTAAGCAGCAG...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACGCATCGTCACTTTCCTaGAAGGATTCCTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHASSLS*KDSFLE
Trigger: CTCAAGGAAGGAATCCTTTCAGGAAAGTGACGATGC...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGGATATTCCTCAACCCTaGGTGCTTTCTGAGGACTCG +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWDIPQP*VLSEDS
Trigger: CGAGTCCTCAGAAAGCACTCAGGGTTGAGGAATATC...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGTTTCTGTGGGCGTCCTaGGGAGCTTCTCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLFLWAS*GASPGP
Trigger: TGGGCCGGGAGAAGCTCCTCAGGACGCCCACAGAAA...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTCTGGGTGCTTGCTGCTaGTTAAACCTTGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: HEPNFPSGHGHLSGISSALGACC*LNLGHQ
Trigger: CTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAG...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCTCCAGAGTGTTGTCTaGCTGCAGACCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGLQSVV*LQTTQA
Trigger: AGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGAG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAGCATGGCTGCAGATGTaGGACTCTGTACTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQAWLQM*DSVLKG
Trigger: CCCCTTCAGTACAGAGTCGCACATCTGCAGCCATGC...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACCTGTTAGGTGCTTTGTaGTCAGCCAAGCGTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHLLGAL*SAKRFR
Trigger: ACGAAAACGCTTGGCTGACCACAAAGCACCTAACAG...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GGTGACTGGGCTAGGAGGCTTTGTGAGGTTGGGTTTTGTAACTTTGTGTGGAAGCCTCTTTTGCTGAGCTaGTGTCCCCTGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GDWARRLCEVGFCNFVWKPLLLS*CPLCCC
Trigger: ACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGG...CTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR CCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACCTCTCAGAGTACCTTTaGTTTGGGGTATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHLSEYL*FGVSSW
Trigger: CCAGGAAGATACCCCAAACCAAAGGTACTCTGAGAG...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGAGACAGCTGCCCTCACTaGCTTGGCTTTCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGLTPLVSSTLFLECFERDSCPH*LGFRSC
Trigger: GCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGCTGTC...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR CAA 72 bp TCCAAAGCCCAGAAACCACCAATGAACACTGTTCCCTaGTCAGGATGCCAGGTCCTGCAGACTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: SKAQKPPMNTVP*SGCQVLQTEVM
Trigger: CATTACCTCAGTCTGCAGGACCTGGCATCCTGACAAGGGAACAGTGTTCATTGGTGGTTTCTGGGCTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR TCA 90 bp TATATGCCTCTCGTGAGTCTCCCTCGTTGTGCCAGTGTCCTTAGCAAGCTCTCTCATCTGGCTGAGACATaGCAGCTGGAAACTGAACAT +
Preference number: 4 (lower is better)
Translates to: YMPLVSLPRCASVLSKLSHLAET*QLETEH
Trigger: ATGTTCAGTTTCCAGCTGTCATGTCTCAGCCAGATG...AGAGAGCTTGCTAAGGACACTGGCACAACGAGGGAGACTCACGAGAGGCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp TATATGCCTCTCGTGAGTCTCCCTCGTTGTGCCAGTGTCCTTAGCAAGCTCTCTGCTTTGCCCAGTATCTaGATGCAATCACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: YMPLVSLPRCASVLSKLSALPSI*MQSPEE
Trigger: TTCCTCTGGTGATTGCATTCAGATACTGGGCAAAGC...AGAGAGCTTGCTAAGGACACTGGCACAACGAGGGAGACTCACGAGAGGCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTGCTTTGCCCAGTATCTaGATGCAATCACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HEPNFPSGHGHLSGISSAALPSI*MQSPEE
Trigger: TTCCTCTGGTGATTGCATTCAGATACTGGGCAAAGC...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATACTGGCACTGAAGGCTaGTGCTTTATATTAAATGTC +
Preference number: 4 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYTGTEG*CFILNV
Trigger: GACATTTAATATAAAGCATCAGCCTTCAGTGCCAGT...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCAGCTGCACACGGTGTaGGCTTATCTTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWQLHTV*AYLLLL
Trigger: CAACAAAAGAAGATAAGCTCACACCGTGTGCAGCTG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCACCTGTCCCTTCTTTaGTGCAGTCTCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGHLSLL*CSLFGC
Trigger: GCACCCAAAGAGACTGCAGCAAAGAAGGGACAGGTG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTCTCCAGAGTGTTGTCTaGCTGCAGACCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSLQSVV*LQTTQA
Trigger: AGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGAG...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGCATGGCTGCAGATGTaGGACTCTGTACTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSAWLQM*DSVLKG
Trigger: CCCCTTCAGTACAGAGTCGCACATCTGCAGCCATGC...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGTCCTCATCATCAAAGTaGATGGCTGCAGATGTGCGA +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWSSSSK*MAADVR
Trigger: TCGCACATCTGCAGCCATGCACTTTGATGATGAGGA...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGACCCTTAGCAGGCTCTaGCAAGTCATCTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWTLSRL*QVIFFR
Trigger: TCTGAAGAAGATGACTTGGCAGAGCCTGCTAAGGGT...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGGCTCTCCTGGTGGGCTaGGATGTGCACACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLALLVG*DVHTSC
Trigger: ACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGC...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGGGTGGAGACCTTTGCTaGAGGAAGTATAGCACCATA +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWGGDLC*RKYSTI
Trigger: TATGGTGCTATACTTCCTCCAGCAAAGGTCTCCACC...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGGAAATCCTTTGACTaGAATTCCAAATACTCTTCT +
Preference number: 4 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPWKSFD*NSKYSS
Trigger: AGAAGAGTATTTGGAATTCCAGTCAAAGGATTTCCA...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCACTGGAAAGGCTACCTaGAGAGCCTTTGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSTGKAT*RAFELW
Trigger: CCACAGTTCAAAGGCTCTCCAGGTAGCCTTTCCAGT...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TCCAAACTGCAGCTGCCCAACTCACAAAAATGTGGCTCCACATCACCCCAGAATGCATCGTCACTTTCCTaGAAGGATTCCTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SKLQLPNSQKCGSTSPQNASSLS*KDSFLE
Trigger: CTCAAGGAAGGAATCCTTTCAGGAAAGTGACGATGC...ATTCTGGGGTGATGTGGAGCCACATTTTTGTGAGTTGGGCAGCTGCAGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR TCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCCTATCCTCTCTTCATTaGCCTCAGCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSLSSLH*PQPCCP
Trigger: TGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAG...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTACCTGCTGTCCACCTaGTGCTCATTAGCAACCCCC +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLYLLST*CSLATP
Trigger: GGGGGTTGCTAATGAGCATCAGGTGGACAGCAGGTA...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCGTGTGTTATACAAGCTaGTGTCCACTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSVCYTS*CPLPDH
Trigger: GTGGTCTGGAAGTGGACATCAGCTTGTATAACACAC...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTTGGGACAGTCCTTCATaGAGTGCCCGATTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSWDSPS*SARFSH
Trigger: GTGGGAAAATCGGGCACTTCATGAAGGACTGTCCCA...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGACTGAGGCTCTCCCCTaGGTCATATATTTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWTEALP*VIYLLE
Trigger: TTCCAGTAAATATATGACTCAGGGGAGAGCCTCAGT...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp GGACAGTACTGCACCTGCCTTGGAGCTTGTGATGGTCCAATGCATGAAATATGTCTCTCTCCAGCTGTCTaGATTACCAGCGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: GQYCTCLGACDGPMHEICLSPAV*ITSEFI
Trigger: GATGAACTCGCTGGTAATGCAGACAGCTGGAGAGAG...ACATATTTCATGCATTGGACCATCACAAGCTCCAAGGCAGGTGCAGTACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR GCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGAATGGCGCTGCCAACTaGATGTATCTGGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLNGAAN*MYLGGR
Trigger: GCGCCCTCCCAGATACATGCAGTTGGCAGCGCCATT...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCCAAAGAAGGCCGCTTTaGTTATCTCTGCACACCACC +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGQRRPL*LSLHTT
Trigger: GGTGGTGTGCAGAGATAAGCAAAGCGGCCTTCTTTG...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACTTTATCAATATTTGTTaGTTGGGGTTCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHFINIC*LGFWAT
Trigger: GGTGGCCCAGAACCCCAAGCAACAAATATTGATAAA...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCACCCTTAGCAGGCTCTaGCAAGTCATCTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSTLSRL*QVIFFR
Trigger: TCTGAAGAAGATGACTTGGCAGAGCCTGCTAAGGGT...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GATCACTGTGAAGCCAGTCTGGTCTACAGAGCAAATTCCACACCAGGGCACCACATGCATATGGATTGCTaGAAACCCCATACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: DHCEASLVYRANSTPGHHMHMDC*KPHTVL
Trigger: AAGGACTGTATGGGGTTTCCAGCAATCCATATGCAT...GTGGTGCCCTGGTGTGGAATTTGCTCTGTAGACCAGACTGGCTTCACAGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR CCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGCACCACTCTGTCAATaGCGCTGCCAACTGCATGTA +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSAPLCQ*RCQLHV
Trigger: TACATGCAGTTGGCAGCGCCATTGACAGAGTGGTGC...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAACAGAGCAAACACATATaGTGGCAGGCCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQQSKHI*WQASFF
Trigger: GAAGAAGGAGGCCTGCCACCATATGTGTTTGCTCTG...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCTACTCAAACACAGGCTaGTTATTCAGGGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSYSNTG*LFRVLA
Trigger: GGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTA...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGAATAGGGGTCTTCAATTGCGATACGCTTTTTGGGCCAGTCCTTTGATTCCCGCTTTGCCCAGTATCTaGATGCAATCACCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QNRGLQLRYAFWASPLIPALPSI*MQSPEE
Trigger: TTCCTCTGGTGATTGCATTCAGATACTGGGCAAAGC...GGGAATCAAAGGACTGGCCCAAAAAGCGTATCGCAATTGAAGACCCCTATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR TCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCTTGCCCGACTGGCACTaGAGGCTGATGCTTTATATT +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGLPDWH*RLMLYI
Trigger: AATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAA...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAATTGCCCGACTGGCACTaGAGGCTGATGCTTTATATT +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQLPDWH*RLMLYI
Trigger: AATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAA...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAGTGTGTTATACAAGCTaGTGTCCACTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQVCYTS*CPLPDH
Trigger: GTGGTCTGGAAGTGGACATCAGCTTGTATAACACAC...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAACAGCTGCACACGGTGTaGGCTTATCTTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQQLHTV*AYLLLL
Trigger: CAACAAAAGAAGATAAGCTCACACCGTGTGCAGCTG...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGCCAAGAGCTGTTAGGTaGTTTGTGGTCAGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLPRAVR*FVVSQA
Trigger: CGCTTGGCTGACCACAAAGCACCTAACAGCTCTTGG...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGACCAAGAGCTGTTAGGTaGTTTGTGGTCAGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RGLTPLVSSTLFLECFERPRAVR*FVVSQA
Trigger: CGCTTGGCTGACCACAAAGCACCTAACAGCTCTTGG...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCTGCCCAGTATCTGAATaGAATCACCAGAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGCPVSE*NHQRNQ
Trigger: CTGGTTCCTCTGGTGATTGCATTCAGATACTGGGCA...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGAGCTGGTGTCCCCTGTaGTGTTGTCAGTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLSWCPL*CCQCIP
Trigger: GGGAATACACTGACAACAGCACAGGGGACACCAGCT...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGAATTCCACCCAGAGTTaGCCGACTGGCACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLNSTQS*PTGTEG
Trigger: GCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATT...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGTCCTGTCTTCTCCTTTaGTGGGCTTCCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLSCLLL*WASHLL
Trigger: GAGGAGGTGGGAAGCCCAGCAAAGGAGAAGACAGGA...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCTTCTGCAGTTCTGGGTaGTTGCTGCTGCTTAAACCT +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGFCSSG*LLLLKP
Trigger: AGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAA...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGCTCGCTTACACAAGCTaGACACTACTGTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLLAYTS*TLLWGT
Trigger: AGTCCCCCACAGTAGTGTGCAGCTTGTGTAAGCGAG...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCGCCCAGGTCGACAGCTaGCCTCACTGGCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALAQVDS*PHWLGF
Trigger: AAAGCCAAGCCAGTGAGGGCAGCTGTCGACCTGGGC...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTATGCATATGGATTGCTaGAAACCCCATACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: HEPNFPSGHGHLSGISSAMHMDC*KPHTVL
Trigger: AAGGACTGTATGGGGTTTCCAGCAATCCATATGCAT...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCTACTCAAACACAGGCTaGTTATTCAGGGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGYSNTG*LFRVLA
Trigger: GGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTA...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCAGACCACTTCTTAGATaGAAGAACTTCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSRPLLR*KNFTMG
Trigger: GCCCATCGTGAAGTTCTTCCATCTAAGAAGTGGTCT...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGGCAGCACCTGTCATTTaGGGCCAGTTCTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLAAPVI*GQFSLS
Trigger: ACTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGC...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACAGAGCCTTTGAACTGTaGGCATTCCTTTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHRAFEL*AFLFNV
Trigger: CACATTAAAAAGGAATGCCCACAGTTCAAAGGCTCT...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTTGTGCCTCTTCTCCTTaGTGTGCTTATGAGCAAACG +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSCASSP*CAYEQT
Trigger: CGTTTGCTCATAAGCACATCAAGGAGAAGAGGCACA...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGATTCTCTGTAAGGGTCTaGAACACAGGTGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RGLTPLVSSTLFLECFERFSVRV*NTGDWA
Trigger: AGCCCAGTCACCTGTGTTTCAGACCCTTACAGAGAA...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAAGTGTAAGCGTAGGATaGCAAGCTGCCTCTGGACGC +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVSVSVG*QAASGR
Trigger: GCGTCCAGAGGCAGCTTGTCATCCTACGCTTACACT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp GATCACTGTGAAGCCAGTCTGGTCTACAGAGCAAATTCCACACCAGGGCACCACACATTAAAGGGCTCATaGCTGAAAAGAACAACACTT +
Preference number: 4 (lower is better)
Translates to: DHCEASLVYRANSTPGHHTLKGS*LKRTTL
Trigger: AAGTGTTGTTCTTTTCAGTCATGAGCCCTTTAATGT...GTGGTGCCCTGGTGTGGAATTTGCTCTGTAGACCAGACTGGCTTCACAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR TCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTTACCTGGAGAGCCTTTaGACTGTGGGCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSYLESL*TVGIPF
Trigger: AAAAGGAATGCCCACAGTTCAAAGGCTCTCCAGGTA...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp ATGCTTTATATTAAATGTCAATGGCACCTCATAGGGCTGTTGGGAGGACTGAGTCCAAGAGCTGTTAGGTaGTTTGTGGTCAGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: MLYIKCQWHLIGLLGGLSPRAVR*FVVSQA
Trigger: CGCTTGGCTGACCACAAAGCACCTAACAGCTCTTGG...ACTCAGTCCTCCCAACAGCCCTATGAGGTGCCATTGACATTTAATATAAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR GCA 90 bp TCCTCAGTGGTATTCTTAAGAGTAACTAGCTGTGCTCTGCAGTCACCTGAGGTTTGCCCAGTATCTGAATaGAATCACCAGAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: SSVVFLRVTSCALQSPEVCPVSE*NHQRNQ
Trigger: CTGGTTCCTCTGGTGATTGCATTCAGATACTGGGCA...AACCTCAGGTGACTGCAGAGCACAGCTAGTTACTCTTAAGAATACCACTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR GCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGAGCTGGTGTCCCCTGTaGTGTTGTCAGTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLSWCPL*CCQCIP
Trigger: GGGAATACACTGACAACAGCACAGGGGACACCAGCT...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp ATGCTTTATATTAAATGTCAATGGCACCTCATAGGGCTGTTGGGAGGACTGAGTAGCTGGTGTCCCCTGTaGTGTTGTCAGTGTATTCCC +
Preference number: 4 (lower is better)
Translates to: MLYIKCQWHLIGLLGGLSSWCPL*CCQCIP
Trigger: GGGAATACACTGACAACAGCACAGGGGACACCAGCT...ACTCAGTCCTCCCAACAGCCCTATGAGGTGCCATTGACATTTAATATAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR GCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAGCAGACCACACAGGCTaGCACAGTTCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVADHTG*HSSAVL
Trigger: CAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGC...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAACTTTCTAGATTTTaGCGGATATGTTCACGAGCC +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWKLSRF*RICSRA
Trigger: GGCTCGTGAACATATCCGGCAAAATCTAGAAAGTTT...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGAGCAAACACATATGGTaGCAGGCCTCCTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLSKHIW*QASFFG
Trigger: CCCGAAGAAGGAGGCCTGCCACCATATGTGTTTGCT...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAACAGATACTTCACTCTaGGGTCAATGGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQTDTSL*GQWLSM
Trigger: CATACTCAGCCATTGACCCCAGAGTGAAGTATCTGT...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAATGACAAGCTGCCTCTaGACGCGTCACCGATGTCAC +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVMTSCL*TRHRCH
Trigger: GTGACATCGGTGACGCGTCCAGAGGCAGCTTGTCAT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGTGGAGACCTTTGCTaGAGGAAGTATAGCACCATA +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSGGDLC*RKYSTI
Trigger: TATGGTGCTATACTTCCTCCAGCAAAGGTCTCCACC...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCATTTTTCCCATATTCTaGCCAACAAGTGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSIFPIF*PTSGQF
Trigger: GAACTGCCCACTTGTTGGCCAGAATATGGGAAAAAT...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGTTTGGGGTATCTTCCTaGTCTCTCCGTCGCCTCACT +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLFGVSS*SLRRLT
Trigger: AGTGAGGCGACGGAGAGACCAGGAAGATACCCCAAA...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCCCTTTGGAAATCCTTTaGCTGGAATTCCAAATACTC +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSPLEIL*LEFQIL
Trigger: GAGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGG...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAGCGTTTTCGTTTCCTaGACTTACTTTACAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWSVFVS*TYFTKK
Trigger: CTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCT...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp GAGTATATACTCAAACACAGGCTGGTTATTCAGGGTCCTTGCCACATTTCTTTTCACCTGTCCCTTCTTTaGTGCAGTCTCTTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EYILKHRLVIQGPCHISFHLSLL*CSLFGC
Trigger: GCACCCAAAGAGACTGCAGCAAAGAAGGGACAGGTG...AAAAGAAATGTGGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTATATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR GCA 90 bp TATATGCCTCTCGTGAGTCTCCCTCGTTGTGCCAGTGTCCTTAGCAAGCTCTCTGTTATTCAGGGTCCTTaGCACATTTCTTTTAACAGA +
Preference number: 4 (lower is better)
Translates to: YMPLVSLPRCASVLSKLSVIQGP*HISFNR
Trigger: TCTGTTAAAAGAAATGTGGCAAGGACCCTGAATAAC...AGAGAGCTTGCTAAGGACACTGGCACAACGAGGGAGACTCACGAGAGGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTAACCTTGGTCATCAGTaGTCAAAGGATGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSNLGHQ*SKDAWS
Trigger: AGACCAAGCATCCTTTGAGCACTGATGACCAAGGTT...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTTCTGCAGTTCTGGGTaGTTGCTGCTGCTTAAACCT +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLFCSSG*LLLLKP
Trigger: AGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAA...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAAGCAAACACATATGGTaGCAGGCCTCCTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVSKHIW*QASFFG
Trigger: CCCGAAGAAGGAGGCCTGCCACCATATGTGTTTGCT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTACCTCTTTTGCTGAGCTaGTGTCCCCTGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVPLLLS*CPLCCC
Trigger: ACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGG...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTCTGCTGCTTAAACCTTaGTCATCAGTGCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSLLLKP*SSVLKG
Trigger: TCCTTTGAGCACTGATGACCAAGGTTTAAGCAGCAG...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTAGAGTACCTTTGGTTTaGGGTATCTTCCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSRVPLV*GIFLVS
Trigger: AGAGACCAGGAAGATACCCCAAACCAAAGGTACTCT...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR CAA 72 bp GAAACACAGGTGACTGGGCTAGGAGGCTTTGTGAGGTaGGGTTTTGTAACTTTGTGTGGAAGAGCGAAATAT +
Preference number: 4 (lower is better)
Translates to: ETQVTGLGGFVR*GFVTLCGRAKY
Trigger: ATATTTCGCTCTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAGTCACCTGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR CAA 72 bp AAGGCTAGCCCTGACTACATGAAGCAGCAGCAGATTTaGATTCTTCTGAAAGGGAACAGCACTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: KASPDYMKQQQI*ILLKGNSTAFL
Trigger: GAGAAAAGCAGTGCTGTTCCCTTTCAGAAGAATCAAAATCTGCTGCTGCTTCATGTAGTCAGGGCTAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR TCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTACTGCTGAGGTCTTTCTaGAACAGCCTTCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVLLRSF*NSLLTA
Trigger: AGCTGTGAGAAGGCTGTTTCAGAAAGACCTCAGCAG...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCTGGCTTCTAGGCTGCTaGGGTCTTTCTGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALWLLGC*GLSETA
Trigger: GGCTGTTTCAGAAAGACCTCAGCAGCCTAGAAGCCA...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAAAGAGGACATCTGGCTaGGACATGACAGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVKRTSG*DMTAGN
Trigger: GTTTCCAGCTGTCATGTCTCAGCCAGATGTCCTCTT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAACTGGCACTGAAGGCTaGTGCTTTATATTAAATGTC +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQTGTEG*CFILNV
Trigger: GACATTTAATATAAAGCATCAGCCTTCAGTGCCAGT...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGCAGTCCTTCTTTAGGTaGCCTTCTCGCTTACACAAG +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLQSFFR*PSRLHK
Trigger: CTTGTGTAAGCGAGAAGGTCACCTAAAGAAGGACTG...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTCAAGGTCACTCTGTTTaGACCCAAATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSQGHSV*TQIHFW
Trigger: CCAAAAATGGATTTGGGTTCAAACAGAGTGACCTTG...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCTCTGGGGTCAATGGCTaGGTATGCAGACAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALSGVNG*VCRQEP
Trigger: AGGCTCTTGTCTGCATACTCAGCCATTGACCCCAGA...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCAGCAATTCTTCCTCCTaGTTTTCCTTAAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGSNSSS*FSLRFF
Trigger: GAAGAACCTTAAGGAAAAGCAGGAGGAAGAATTGCT...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR TCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGATGTCACACATCTTTGTaGACACTTTCATGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RGLTPLVSSTLFLECFERCHTSL*TLSWCS
Trigger: GCTACACCATGAAAGTGTTCACAAAGATGTGTGACA...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTTCTGTGTACTTGTTCTaGATCTCTTTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSSVYLF*ISLSSL
Trigger: CAAAGAGGACAAAGAGATTCAGAACAAGTACACAGA...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTTAAGGTTCTTCTTGTaGCTCTTCTCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLLRFFL*LFSLMC
Trigger: GCACATCAAGGAGAAGAGGCACAAGAAGAACCTTAA...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR GCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTATGCCCAGTATCTGAATaGAATCACCAGAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVCPVSE*NHQRNQ
Trigger: CTGGTTCCTCTGGTGATTGCATTCAGATACTGGGCA...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCGTTATTCAGGGTCCTTaGCACATTTCTTTTAACAGA +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGVIQGP*HISFNR
Trigger: TCTGTTAAAAGAAATGTGGCAAGGACCCTGAATAAC...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTATCTTGAGCCACAGCTaGATTTCCCAGTTTATCAAT +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSILSHS*ISQFIN
Trigger: ATTGATAAACTGGGAAATGCAGCTGTGGCTCAAGAT...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCTGGGTGCTTGCTGCTaGTTAAACCTTGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALLGACC*LNLGHQ
Trigger: CTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTAAACTTTCTAGATTTTaGCGGATATGTTCACGAGCC +
Preference number: 4 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSKLSRF*RICSRA
Trigger: GGCTCGTGAACATATCCGGCAAAATCTAGAAAGTTT...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCATACAGTCCTTTCCTaGGGGTGTTCCCATAGTTCC +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALHTVLS*GCSHSS
Trigger: GGAACTATGGGAACACCCCCAGGAAAGGACTGTATG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCAGAGCAAACACATATaGTGGCAGGCCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALQSKHI*WQASFF
Trigger: GAAGAAGGAGGCCTGCCACCATATGTGTTTGCTCTG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCGTTGTCCTCAAACAATaGAGTATATACTCAAACACA +
Preference number: 4 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSVVLKQ*SIYSNT
Trigger: TGTGTTTGAGTATATACTCCATTGTTTGAGGACAAC...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTCAATATTTGTTGCTTaGGGTTCTGGGCCACCATTT +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLSIFVA*GSGPPF
Trigger: AAATGGTGGCCCAGAACCCCAAGCAACAAATATTGA...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGATCAATATTTGTTGCTTaGGGTTCTGGGCCACCATTT +
Preference number: 4 (lower is better)
Translates to: RGLTPLVSSTLFLECFERSIFVA*GSGPPF
Trigger: AAATGGTGGCCCAGAACCCCAAGCAACAAATATTGA...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGACAGATACTTCACTCTaGGGTCAATGGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLTDTSL*GQWLSM
Trigger: CATACTCAGCCATTGACCCCAGAGTGAAGTATCTGT...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGATTTTTCCCATATTCTaGCCAACAAGTGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: INSLERAPVRPEGCQSNLIFPIF*PTSGQF
Trigger: GAACTGCCCACTTGTTGGCCAGAATATGGGAAAAAT...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
3UTR CAA 72 bp CTTTATATTAAATGTCAATGGCACCTCATAGGGCTGTaGGGAGGACTGAGTGAGATAGTGTCTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LYIKCQWHLIGL*GGLSEIVSVKC
Trigger: GCACTTTACAGACACTATCTCACTCAGTCCTCCCAACAGCCCTATGAGGTGCCATTGACATTTAATATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
3UTR CAA 72 bp GGGCTAGGAGGCTTTGTGAGGTTGGGTTTTGTAACTTaGTGTGGAAGAGCGAAATATTTATATGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLGGFVRLGFVT*CGRAKYLYVVL
Trigger: GAGGACAACATATAAATATTTCGCTCTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR TCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCTATCCTCTCTTCATTaGCCTCAGCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALLSSLH*PQPCCP
Trigger: TGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCAGTCCTTCTTTAGGTaGCCTTCTCGCTTACACAAG +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALQSFFR*PSRLHK
Trigger: CTTGTGTAAGCGAGAAGGTCACCTAAAGAAGGACTG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGAATATGTTCACGAGCCTaGTCTTCTACAATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RGLTPLVSSTLFLECFERICSRA*SSTIVG
Trigger: TCCAACTATTGTAGAAGATCAGGCTCGTGAACATAT...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAAATACTACAAAGCTTTaGCCAGTATCTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQNTTKL*PVSECN
Trigger: ATTGCATTCAGATACTGGGCAAAGCTTTGTAGTATT...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGTTTATCAATATTTGTTaGTTGGGGTTCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLFINIC*LGFWAT
Trigger: GGTGGCCCAGAACCCCAAGCAACAAATATTGATAAA...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAAACCTTGGTCATCAGTaGTCAAAGGATGCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVNLGHQ*SKDAWS
Trigger: AGACCAAGCATCCTTTGAGCACTGATGACCAAGGTT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCTCCTCATCATCAAAGTaGATGGCTGCAGATGTGCGA +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALSSSSK*MAADVR
Trigger: TCGCACATCTGCAGCCATGCACTTTGATGATGAGGA...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCGTTTTTAAATGCATATaGATTGCTGGAAACCCCATA +
Preference number: 4 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGVFKCI*IAGNPI
Trigger: TATGGGGTTTCCAGCAATCCATATGCATTTAAAAAC...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCTGTTAGGTGCTTTGTaGTCAGCCAAGCGTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALLLGAL*SAKRFR
Trigger: ACGAAAACGCTTGGCTGACCACAAAGCACCTAACAG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCTCTCAGAGTACCTTTaGTTTGGGGTATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALLSEYL*FGVSSW
Trigger: CCAGGAAGATACCCCAAACCAAAGGTACTCTGAGAG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGAAGAGCCTTTGAACTGTaGGCATTCCTTTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: RGLTPLVSSTLFLECFERRAFEL*AFLFNV
Trigger: CACATTAAAAAGGAATGCCCACAGTTCAAAGGCTCT...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTACAGTCCTTCATGAAGTaGCCGATTTTCCCACAAATT +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVQSFMK*PIFPQI
Trigger: AATTTGTGGGAAAATCGGGCACTTCATGAAGGACTG...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCAGTCCTTCATGAAGTaGCCGATTTTCCCACAAATT +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALQSFMK*PIFPQI
Trigger: AATTTGTGGGAAAATCGGGCACTTCATGAAGGACTG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCCCTTTGGAAATCCTTTaGCTGGAATTCCAAATACTC +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALPLEIL*LEFQIL
Trigger: GAGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGG...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR TCA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCTCTGTGTACTTGTTCTaGATCTCTTTGTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALSVYLF*ISLSSL
Trigger: CAAAGAGGACAAAGAGATTCAGAACAAGTACACAGA...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAAGCGTTTTCGTTTCCTaGACTTACTTTACAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVSVFVS*TYFTKK
Trigger: CTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CCA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGGTTGTCCTCAAACAATaGAGTATATACTCAAACACA +
Preference number: 4 (lower is better)
Translates to: QVLAFHAIISTMSHEECLVVLKQ*SIYSNT
Trigger: TGTGTTTGAGTATATACTCCATTGTTTGAGGACAAC...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAAATACTACAAAGCTTTaGCCAGTATCTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVNTTKL*PVSECN
Trigger: ATTGCATTCAGATACTGGGCAAAGCTTTGTAGTATT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR GCA 90 bp GAGTATATACTCAAACACAGGCTGGTTATTCAGGGTCCTTGCCACATTTCTTTTAATACTACAAAGCTTTaGCCAGTATCTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: EYILKHRLVIQGPCHISFNTTKL*PVSECN
Trigger: ATTGCATTCAGATACTGGGCAAAGCTTTGTAGTATT...AAAAGAAATGTGGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTATATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR CCA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTATGGAAATCCTTTGACTaGAATTCCAAATACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVWKSFD*NSKYSS
Trigger: AGAAGAGTATTTGGAATTCCAGTCAAAGGATTTCCA...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp ACCTCTGCCTGGACACAGCCAGAGCTCTCCTGGTGGGCTGGGATGTaGACACCTCCTGTCTTCTCCTTTGCTGGGCTTCCCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TSAWTQPELSWWAGM*TPPVFSFAGLPTSS
Trigger: TGAGGAGGTGGGAAGCCCAGCAAAGGAGAAGACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGCTCTGGCTGTGTCCAGGCAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp CGGAAGCTCTGCTGTGGCATCCTCCAAACCCTCACAACTGACCTCTaGCTGGACACAGCCAGAGCTCTCCTGGTGGGCTGGGATGTGCAC +
Preference number: 5 (lower is better)
Translates to: RKLCCGILQTLTTDL*LDTARALLVGWDVH
Trigger: GTGCACATCCCAGCCCACCAGGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTTGGAGGATGCCACAGCAGAGCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp ACAACTGACCTCTGCCTGGACACAGCCAGAGCTCTCCTGGTGGGCTaGGATGTGCACACCTCCTGTCTTCTCCTTTGCTGGGCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: TTDLCLDTARALLVG*DVHTSCLLLCWASH
Trigger: GTGGGAAGCCCAGCAAAGGAGAAGACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp AGCTCTGCTGTGGCATCCTCCAAACCCTCACAACTGACCTCTGCCTaGACACAGCCAGAGCTCTCCTGGTGGGCTGGGATGTGCACACCT +
Preference number: 5 (lower is better)
Translates to: SSAVASSKPSQLTSA*TQPELSWWAGMCTP
Trigger: AGGTGTGCACATCCCAGCCCACCAGGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTTGGAGGATGCCACAGCAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp CGTCCTGAGGAGCTTCTCCCGGCCCAGGTCGACAGCTGCCCTCACTaGCTTGGCTTTCGCAGCTGCACACGGTGTGAGCTTATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RPEELLPAQVDSCPH*LGFRSCTRCELIFF
Trigger: AAAGAAGATAAGCTCACACCGTGTGCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGCTGTCGACCTGGGCCGGGAGAAGCTCCTCAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp GGCAGTTTCGTGGTCGCCTTTTCAGCCTGTCGATGCAGTCTCTCTTaGGCCGTTCCTCAGCCTGCTGGAGGCCCAACAGCTCCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: GSFVVAFSACRCSLS*AVPQPAGGPTAPWL
Trigger: CAACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAGGCTGAAAAGGCGACCACGAAACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 90 bp AAACCCTCACAACTGACCTCTGCCTGGACACAGCCAGAGCTCTCCTaGTGGGCTGGGATGTGCACACCTCCTGTCTTCTCCTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: KPSQLTSAWTQPELS*WAGMCTPPVFSFAG
Trigger: CCCAGCAAAGGAGAAGACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATTGGGTGCCTCCTCTTTaGCTGAGCTGGTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYWVPPL*LSWCPL
Trigger: CAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCA...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp GCTGGAGGCCCAACAGCTCCTTGGTTGAAAGGACAGACTCGTCGATaGCAGGACCGTCCAGATCTCCATCCTGCTCACTGTCCTCCGTTC +
Preference number: 5 (lower is better)
Translates to: AGGPTAPWLKGQTRR*QDRPDLHPAHCPPF
Trigger: GAACGGAGGACAGTGAGCAGGATGGAGATCTGGACGGTCCTGTCATCGACGAGTCTGTCCTTTCAACCAAGGAGCTGTTGGGCCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS TCA 90 bp CTTGAGCCGTTCCTCAGCCTGCTGGAGGCCCAACAGCTCCTTGGTTaGAAGGACAGACTCGTCGATGACAGGACCGTCCAGATCTCCATC +
Preference number: 5 (lower is better)
Translates to: LEPFLSLLEAQQLLG*KDRLVDDRTVQISI
Trigger: GATGGAGATCTGGACGGTCCTGTCATCGACGAGTCTGTCCTTTCAACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 90 bp TTTCACTGTGTAAACCAAACTCCTGCACCACTCTGTCAATGGCGCTaGCAACTGCATGTATCTGGGAGGGCGCTGGCGGGGGCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: FHCVNQTPAPLCQWR*QLHVSGRALAGAVW
Trigger: CCACACTGCCCCCGCCAGCGCCCTCCCAGATACATGCAGTTGGCAGCGCCATTGACAGAGTGGTGCAGGAGTTTGGTTTACACAGTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 90 bp CACTCTGTCAATGGCGCTGCCAACTGCATGTATCTGGGAGGGCGCTaGCGGGGGCAGTGTGGTGAGCAATTCTTCCTCCTGCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: HSVNGAANCMYLGGR*RGQCGEQFFLLLFL
Trigger: AAGGAAAAGCAGGAGGAAGAATTGCTCACCACACTGCCCCCGCCAGCGCCCTCCCAGATACATGCAGTTGGCAGCGCCATTGACAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 90 bp CTTTTCAGCCTGTCGATGCAGTCTCTCTTGAGCCGTTCCTCAGCCTaGTGGAGGCCCAACAGCTCCTTGGTTGAAAGGACAGACTCGTCG +
Preference number: 5 (lower is better)
Translates to: LFSLSMQSLLSRSSA*WRPNSSLVERTDSS
Trigger: CGACGAGTCTGTCCTTTCAACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAGGCTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 90 bp TTCAGCCTGTCGATGCAGTCTCTCTTGAGCCGTTCCTCAGCCTGCTaGAGGCCCAACAGCTCCTTGGTTGAAAGGACAGACTCGTCGATG +
Preference number: 5 (lower is better)
Translates to: FSLSMQSLLSRSSAC*RPNSSLVERTDSSM
Trigger: CATCGACGAGTCTGTCCTTTCAACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 90 bp CCAAGTTTTCACTGTGTAAACCAAACTCCTGCACCACTCTGTCAATaGCGCTGCCAACTGCATGTATCTGGGAGGGCGCTGGCGGGGGCA +
Preference number: 5 (lower is better)
Translates to: PSFHCVNQTPAPLCQ*RCQLHVSGRALAGA
Trigger: TGCCCCCGCCAGCGCCCTCCCAGATACATGCAGTTGGCAGCGCCATTGACAGAGTGGTGCAGGAGTTTGGTTTACACAGTGAAAACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCAGTGGGGGACTTGCCTTaGGTGAAGGTCAGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPVGDLP*VKVSFL
Trigger: TAGAAAACTGACCTTCACCAAAGGCAAGTCCCCCAC...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACGGCAGCACCTGTCATTaGGGGCCAGTTCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHGSTCH*GPVLPQ
Trigger: CTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGCC...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp AGGCTCTGCCAAGTCATCTTCTTCAGAGAGGGCATCCTCCTCACCTaGCCCAGCATACCTGCTGTCCACCTGATGCTCATTAGCAACCCC +
Preference number: 5 (lower is better)
Translates to: RLCQVIFFREGILLT*PSIPAVHLMLISNP
Trigger: GGGGTTGCTAATGAGCATCAGGTGGACAGCAGGTATGCTGGGTCAGGTGAGGAGGATGCCCTCTCTGAAGAAGATGACTTGGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp TGGGAGGGCGCTGGCGGGGGCAGTGTGGTGAGCAATTCTTCCTCCTaGTTTTCCTTAAGGTTCTTCTTGTGCCTCTTCTCCTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: WEGAGGGSVVSNSSS*FSLRFFLCLFSLMC
Trigger: GCACATCAAGGAGAAGAGGCACAAGAAGAACCTTAAGGAAAAGCAGGAGGAAGAATTGCTCACCACACTGCCCCCGCCAGCGCCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 90 bp CTCCGTCGCCTCACTTTCCTCCTCATGGGACAGTCCTTCATGAAGTaGCCGATTTTCCCACAAATTCGGCAGCACCTGTCATTTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LRRLTFLLMGQSFMK*PIFPQIRQHLSFGA
Trigger: GGCCCCAAATGACAGGTGCTGCCGAATTTGTGGGAAAATCGGGCACTTCATGAAGGACTGTCCCATGAGGAGGAAAGTGAGGCGACGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp GCAGCAATTCCACCCAGAGTTGCCCGACTGGCACTGAAGGCTGATGCTTTATATTGGGTGCCTCCTCTTTaGCTGAGCTGGTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: AAIPPRVARLALKADALYWVPPL*LSWCPL
Trigger: CAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCA...ATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS TCA 90 bp CTGTCCCTTCTTTGCTGCAGTCTCTTTGGGTGCCTCCTCTTTTGCTaGGCTGGTGTCCCCTGTGCTGTTGTCAGTGTATTCCCAGACCAC +
Preference number: 5 (lower is better)
Translates to: LSLLCCSLFGCLLFC*AGVPCAVVSVFPDH
Trigger: GTGGTCTGGGAATACACTGACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAAGAAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
ENSMUST00000225241.2
CDS GCA 90 bp CTTCCTTCTGACTTCCTCGTTGTCACTTCCTGTTTCCGGAAGCTCTaGTGTGGCATCCTCCAAACCCTCACAACTGACCTCTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LPSDFLVVTSCFRKL*CGILQTLTTDLCLD
Trigger: GTCCAGGCAGAGGTCAGTTGTGAGGGTTTGGAGGATGCCACAGCAGAGCTTCCGGAAACAGGAAGTGACAACGAGGAAGTCAGAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp CCTGCAGACCACACAGGCTGCCACAGTTCTGCAGTTCTGGGTGCTTaGTGCTGCTTAAACCTTGGTCATCAGTGCTCAAAGGATGCTTGG +
Preference number: 5 (lower is better)
Translates to: PADHTGCHSSAVLGA*CCLNLGHQCSKDAW
Trigger: CCAAGCATCCTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp TCCAGAGTGTTGTCTGCCTGCAGACCACACAGGCTGCCACAGTTCTaGAGTTCTGGGTGCTTGCTGCTGCTTAAACCTTGGTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: SRVLSACRPHRLPQF*SSGCLLLLKPWSSV
Trigger: CACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp GTCCAGATCTCCATCCTGCTCACTGTCCTCCGTTCTAGTCCTCCGTaGCTTACGAGGTCTGGACCGCTGTTTCTTGTTTTCAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: VQISILLTVLRSSPP*LTRSGPLFLVFRTS
Trigger: GGAAGTCCTGAAAACAAGAAACAGCGGTCCAGACCTCGTAAGCCACGGAGGACTAGAACGGAGGACAGTGAGCAGGATGGAGATCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp TGCACACCCCAGACCCGGTGCACAGCTATCAAAGGGGAACAGCATGGGCACCCTTCCTTAAGGTTCTTCTaGTGCCTCTTCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: CTPQTRCTAIKGEQHGHPSLRFF*CLFSLM
Trigger: CATCAAGGAGAAGAGGCACAAGAAGAACCTTAAGGA...AGGGTGCCCATGCTGTTCCCCTTTGATAGCTGTGCACCGGGTCTGGGGTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATGTGGGGGACTTGCCTTaGGTGAAGGTCAGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYVGDLP*VKVSFL
Trigger: TAGAAAACTGACCTTCACCAAAGGCAAGTCCCCCAC...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATATGCAGACAAGAGCCTaGTGTTATGAAGCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYMQTRA*CYEAPV
Trigger: CACTGGCGCTTCATAACACAAGGCTCTTGTCTGCAT...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATCAGAGTACCTTTGGTTaGGGGTATCTTCCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYQSTFG*GYLPGL
Trigger: GAGACCAGGAAGATACCCCAAACCAAAGGTACTCTG...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp GAGAGGGCATCCTCCTCACCTGACCCAGCATACCTGCTGTCCACCTaGTGCTCATTAGCAACCCCCTCCTCATCTTCTGTAAGGTTAATG +
Preference number: 5 (lower is better)
Translates to: ERASSSPDPAYLLST*CSLATPSSSSVRLM
Trigger: CATTAACCTTACAGAAGATGAGGAGGGGGTTGCTAATGAGCATCAGGTGGACAGCAGGTATGCTGGGTCAGGTGAGGAGGATGCCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp TCCAGCTGGACCCTCTTGAAGTCCTCAGGACAGTCCTTCTTTAGGTaGCCTTCTCGCTTACACAAGCTGCACACTACTGTGGGGGACTTG +
Preference number: 5 (lower is better)
Translates to: SSWTLLKSSGQSFFR*PSRLHKLHTTVGDL
Trigger: CAAGTCCCCCACAGTAGTGTGCAGCTTGTGTAAGCGAGAAGGTCACCTAAAGAAGGACTGTCCTGAGGACTTCAAGAGGGTCCAGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp GGTCTCTCCGTCGCCTCACTTTCCTCCTCATGGGACAGTCCTTCATaGAGTGCCCGATTTTCCCACAAATTCGGCAGCACCTGTCATTTG +
Preference number: 5 (lower is better)
Translates to: GLSVASLSSSWDSPS*SARFSHKFGSTCHL
Trigger: CAAATGACAGGTGCTGCCGAATTTGTGGGAAAATCGGGCACTTCATGAAGGACTGTCCCATGAGGAGGAAAGTGAGGCGACGGAGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp CAGCTACTAACTCCAGAGTGTTGTCTGCCTGCAGACCACACAGGCTaGCACAGTTCTGCAGTTCTGGGTGCTTGCTGCTGCTTAAACCTT +
Preference number: 5 (lower is better)
Translates to: QLLTPECCLPADHTG*HSSAVLGACCCLNL
Trigger: AAGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGAGTTAGTAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp CAGAGTAGGGATGATACACCTGTCCCTTCTTTGCTGCAGTCTCTTTaGGTGCCTCCTCTTTTGCTGAGCTGGTGTCCCCTGTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: QSRDDTPVPSLLQSL*VPPLLLSWCPLCCC
Trigger: ACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAAGAAGGGACAGGTGTATCATCCCTACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR CAA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCTGGGTGCCTCCTCTTTaGCTGAGCTGGTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGWVPPL*LSWCPL
Trigger: CAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCA...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TATATGCCTCTCGTGAGTCTCCCTCGTTGTGCCAGTGTCCTTAGCAAGCTCTCTGCACCTGTCCCTTCTTaGCTGCAGTCTCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: YMPLVSLPRCASVLSKLSAPVPS*LQSLWV
Trigger: CACCCAAAGAGACTGCAGCAAAGAAGGGACAGGTGC...AGAGAGCTTGCTAAGGACACTGGCACAACGAGGGAGACTCACGAGAGGCATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAGGCAGCACCTGTCATTaGGGGCCAGTTCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQGSTCH*GPVLPQ
Trigger: CTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGCC...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp CAGCTATTACACTCTTCAGCTACTAACTCCAGAGTGTTGTCTGCCTaGAGACCACACAGGCTGCCACAGTTCTGCAGTTCTGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: QLLHSSATNSRVLSA*RPHRLPQFCSSGCL
Trigger: CAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGAGTTAGTAGCTGAAGAGTGTAATAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATGCTATAAAGCATCGCACAGTTaGCAGGTATACTTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: CCGRPPRPTLTGACIPCYKASHS*QVYFAV
Trigger: GACAGCAAAGTATACCTGCAAACTGTGCGATGCTTT...ATAGCATGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACGAGCTGTTAGGTGCTTaGTGGTCAGCCAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHELLGA*WSAKRF
Trigger: AAAACGCTTGGCTGACCACAAAGCACCTAACAGCTC...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACCAGAGTACCTTTGGTTaGGGGTATCTTCCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHQSTFG*GYLPGL
Trigger: GAGACCAGGAAGATACCCCAAACCAAAGGTACTCTG...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGAGCTGCCCTCACTGGCTaGGCTTTCGCAGCTGCACAC +
Preference number: 5 (lower is better)
Translates to: RGLTPLVSSTLFLECFERAALTG*AFAAAH
Trigger: GTGTGCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGC...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp CGGAATGGAGTCAATCAAAGCATCGCACAGTTTGCAGGTATACTTTaGTGTCGGGCAGTTTCGTGGTCGCCTTTTCAGCCTGTCGATGCA +
Preference number: 5 (lower is better)
Translates to: RNGVNQSIAQFAGIL*CRAVSWSPFQPVDA
Trigger: TGCATCGACAGGCTGAAAAGGCGACCACGAAACTGCCCGACAGCAAAGTATACCTGCAAACTGTGCGATGCTTTGATTGACTCCATTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 90 bp TCCTCTTCCTCCTCTTCTTCCTCCTCCTCCTCCTCATCATCAAAGTaGATGGCTGCAGATGTGCGACTCTGTACTGAAGGGGAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSSSSSK*MAADVRLCTEGEKQ
Trigger: TTGCTTTTCCCCTTCAGTACAGAGTCGCACATCTGCAGCCATGCACTTTGATGATGAGGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp CTTCCTCCTCTTCTTCCTCCTCCTCCTCCTCATCATCAAAGTGCATaGCTGCAGATGTGCGACTCTGTACTGAAGGGGAAAAGCAACTCA +
Preference number: 5 (lower is better)
Translates to: LPPLLPPPPPHHQSA*LQMCDSVLKGKSNS
Trigger: TGAGTTGCTTTTCCCCTTCAGTACAGAGTCGCACATCTGCAGCCATGCACTTTGATGATGAGGAGGAGGAGGAGGAAGAAGAGGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTTCGATGCAGTCTCTCTaGAGCCGTTCCTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSSMQSL*SRSSAC
Trigger: GCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGA...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTTTTGCTGCAGTCTCTTaGGGTGCCTCCTCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: HEPNFPSGHGHLSGISSAFAAVS*GASSFA
Trigger: AGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAA...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGTTTGCTGCAGTCTCTTaGGGTGCCTCCTCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWFAAVS*GASSFA
Trigger: AGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAA...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAGCACCTGTCCCTTCTTaGCTGCAGTCTCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQAPVPS*LQSLWV
Trigger: CACCCAAAGAGACTGCAGCAAAGAAGGGACAGGTGC...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACAATAGGGGTCTTCAATaGCGATACGCTTTTTGGGCC +
Preference number: 5 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHNRGLQ*RYAFWA
Trigger: GGCCCAAAAAGCGTATCGCAATTGAAGACCCCTATT...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTTCCAGCTGGACCCTCTaGAAGTCCTCAGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSSSWTL*KSSGQS
Trigger: GGACTGTCCTGAGGACTTCAAGAGGGTCCAGCTGGA...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTATGCAGACAAGAGCCTaGTGTTATGAAGCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: HEPNFPSGHGHLSGISSAMQTRA*CYEAPV
Trigger: CACTGGCGCTTCATAACACAAGGCTCTTGTCTGCAT...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CAGTGGTGCTGTGGTCGTCCACCGAGGCCCACACTGACAGGTGCTTGCATTCCATCCTTTGGAAATCCTTaGACTGGAATTCCAAATACT +
Preference number: 5 (lower is better)
Translates to: QWCCGRPPRPTLTGACIPSFGNP*TGIPNT
Trigger: AGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGA...TGGAATGCAAGCACCTGTCAGTGTGGGCCTCGGTGGACGACCACAGCACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp CGACAGCTGCCCTCACTGGCTTGGCTTTCGCAGCTGCACACGGTGTaGGCTTATCTTCTTTTGTTGACACTTCCTTTTCTGTGTACTTGT +
Preference number: 5 (lower is better)
Translates to: RQLPSLAWLSQLHTV*AYLLLLTLPFLCTC
Trigger: ACAAGTACACAGAAAAGGAAGTGTCAACAAAAGAAGATAAGCTCACACCGTGTGCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 90 bp CGTTTCCTGCACTTACTTTACAAAGAAGGCCGCTTTGCTTATCTCTaGACACCACCACAGGGACCCGGGCATGGAAATCAGCATCAACAT +
Preference number: 5 (lower is better)
Translates to: RFLHLLYKEGRFAYL*TPPQGPGHGNQHQH
Trigger: ATGTTGATGCTGATTTCCATGCCCGGGTCCCTGTGGTGGTGTGCAGAGATAAGCAAAGCGGCCTTCTTTGTAAAGTAAGTGCAGGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 90 bp CAAGCGTTTTCGTTTCCTGCACTTACTTTACAAAGAAGGCCGCTTTaGTTATCTCTGCACACCACCACAGGGACCCGGGCATGGAAATCA +
Preference number: 5 (lower is better)
Translates to: QAFSFPALTLQRRPL*LSLHTTTGTRAWKS
Trigger: TGATTTCCATGCCCGGGTCCCTGTGGTGGTGTGCAGAGATAAGCAAAGCGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 90 bp GGCACCTTGGCTGTTGTGATAGGAAGGATATTCCTCAACCCTGAGTaGTTTCTGAGGACTCGAGCCAGCTCCTCAATAGTTCTTACACAG +
Preference number: 5 (lower is better)
Translates to: GTLAVVIGRIFLNPE*FLRTRASSSIVLTQ
Trigger: CTGTGTAAGAACTATTGAGGAGCTGGCTCGAGTCCTCAGAAAGCACTCAGGGTTGAGGAATATCCTTCCTATCACAACAGCCAAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCCTGGGCCACCATTTTTaGCTTCTCTGTAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSLGHHF*LLCKGL
Trigger: CAGACCCTTACAGAGAAGCAAAAAATGGTGGCCCAG...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCACTAACTCCAGAGTGTaGTCTGCCTGCAGACCACAC +
Preference number: 5 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGTNSRV*SACRPH
Trigger: GTGTGGTCTGCAGGCAGACAACACTCTGGAGTTAGT...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGGCCACGGACACCTTGATCTAAGATGTTaGAGAACTTGGGTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LCHCVLCHEPNFPSGHGHLDLRC*RTWVSG
Trigger: CCCTGACACCCAAGTTCTCAAACATCTTAGATCAAG...GTGTCCGTGGCCACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp AACCGCAGCAATTCCACCCAGAGTTGCCCGACTGGCACTGAAGGCTaGTGCTTTATATTAAATGTCAATGGCACCTGTCCCTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: NRSNSTQSCPTGTEG*CFILNVNGTCPFFA
Trigger: AGCAAAGAAGGGACAGGTGCCATTGACATTTAATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp AGCATAGAACCGCAGCAATTCCACCCAGAGTTGCCCGACTGGCACTaGAGGCTGATGCTTTATATTAAATGTCAATGGCACCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: SIEPQQFHPELPDWH*RLMLYIKCQWHLSL
Trigger: AAGGGACAGGTGCCATTGACATTTAATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGGTTCTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTGGAGGCTTTGTGAGGTaGGGTTTTGTAACTTTGTGT +
Preference number: 5 (lower is better)
Translates to: HEPNFPSGHGHLSGISSAGGFVR*GFVTLC
Trigger: ACACAAAGTTACAAAACCCAACCTCACAAAGCCTCC...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAACTGGGCCACCATTTTTaGCTTCTCTGTAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQLGHHF*LLCKGL
Trigger: CAGACCCTTACAGAGAAGCAAAAAATGGTGGCCCAG...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCCAGTTTATCAATATTaGTTGCTTGGGGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWPVYQY*LLGVLG
Trigger: GCCCAGAACCCCAAGCAACAAATATTGATAAACTGG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCGTGCTCAAAGGATGCTaGGTCTTCCTTCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGVLKGC*VFLLTS
Trigger: GGAAGTCAGAAGGAAGACCAAGCATCCTTTGAGCAC...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGCTTGATCTAAGATGTTaGAGAACTTGGGTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWLDLRC*RTWVSG
Trigger: CCCTGACACCCAAGTTCTCAAACATCTTAGATCAAG...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCGCTGCCCTCACTGGCTaGGCTTTCGCAGCTGCACAC +
Preference number: 5 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALAALTG*AFAAAH
Trigger: GTGTGCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGC...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp CTCCTTCTTCGGGGCGATCAATACTACAAAGCTTTGCCCAGTATCTaGATGCAATCACCAGAGGAACCAGCCTTGGCTCTAGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLLRGDQYYKALPSI*MQSPEEPALALVFQ
Trigger: TTGGAAAACTAGAGCCAAGGCTGGTTCCTCTGGTGATTGCATTCAGATACTGGGCAAAGCTTTGTAGTATTGATCGCCCCGAAGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
ENSMUST00000225241.2
CDS GCA 90 bp GCTTATGAGCAAACGGAATGGAGTCAATCAAAGCATCGCACAGTTTaGAGGTATACTTTGCTGTCGGGCAGTTTCGTGGTCGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: AYEQTEWSQSKHRTV*RYTLLSGSFVVAFS
Trigger: TGAAAAGGCGACCACGAAACTGCCCGACAGCAAAGTATACCTGCAAACTGTGCGATGCTTTGATTGACTCCATTCCGTTTGCTCATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGTGCTCAAAGGATGCTaGGTCTTCCTTCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSVLKGC*VFLLTS
Trigger: GGAAGTCAGAAGGAAGACCAAGCATCCTTTGAGCAC...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAAGCCAGTTTTGAGGGGTaGTCCTTTGGAAATCCTTTG +
Preference number: 5 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQASFEG*SFGNPL
Trigger: CAAAGGATTTCCAAAGGACAACCCCTCAAAACTGGC...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp AGTGTGTTATACAAGCTGATGTCCACTTCCAGACCACTTCTTAGATaGAAGAACTTCACGATGGGCACCTTGGCTGTTGTGATAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SVLYKLMSTSRPLLR*KNFTMGTLAVVIGR
Trigger: CCTTCCTATCACAACAGCCAAGGTGCCCATCGTGAAGTTCTTCCATCTAAGAAGTGGTCTGGAAGTGGACATCAGCTTGTATAACACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CATGAACCTAATTTCCCAAGTGGCCACGGACACCTGAGTGGCATTTCCAGTGCTTTAAATGCATATGGATaGCTGGAAACCCCATACAGT +
Preference number: 5 (lower is better)
Translates to: HEPNFPSGHGHLSGISSALNAYG*LETPYS
Trigger: ACTGTATGGGGTTTCCAGCAATCCATATGCATTTAA...AGCACTGGAAATGCCACTCAGGTGTCCGTGGCCACTTGGGAAATTAGGTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp CAAACAATGGAGTATATACTCAAACACAGGCTGGTTATTCAGGGTCCTTGCCACGAGCTGTTAGGTGCTTaGTGGTCAGCCAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: QTMEYILKHRLVIQGPCHELLGA*WSAKRF
Trigger: AAAACGCTTGGCTGACCACAAAGCACCTAACAGCTC...GTGGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTATATACTCCATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR CAA 90 bp CAAACAATGGAGTATATACTCAAACACAGGCTGGTTATTCAGGGTCCTTGCCACTTTGCTGCAGTCTCTTaGGGTGCCTCCTCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: QTMEYILKHRLVIQGPCHFAAVS*GASSFA
Trigger: AGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAA...GTGGCAAGGACCCTGAATAACCAGCCTGTGTTTGAGTATATACTCCATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS-3UTR CAA 90 bp TTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGTGATTGGCGGAGGCTTTGTGAGGTaGGGTTTTGTAACTTTGTGT +
Preference number: 5 (lower is better)
Translates to: FREGSSQTRRLPIKLVIGGGFVR*GFVTLC
Trigger: ACACAAAGTTACAAAACCCAACCTCACAAAGCCTCC...GCCAATCACAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CAGGTGCTTGCATTCCATGCTATCATTTCTACAATGAGCCATGAAGAATGCTTGACTAACTCCAGAGTGTaGTCTGCCTGCAGACCACAC +
Preference number: 5 (lower is better)
Translates to: QVLAFHAIISTMSHEECLTNSRV*SACRPH
Trigger: GTGTGGTCTGCAGGCAGACAACACTCTGGAGTTAGT...CAAGCATTCTTCATGGCTCATTGTAGAAATGATAGCATGGAATGCAAGCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCTCCAGCTGGACCCTCTaGAAGTCCTCAGGACAGTCC +
Preference number: 5 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALSSWTL*KSSGQS
Trigger: GGACTGTCCTGAGGACTTCAAGAGGGTCCAGCTGGA...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TCCAAACTGCAGCTGCCCAACTCACAAAAATGTGGCTCCACATCACCCCAGAATTTAAATGCATATGGATaGCTGGAAACCCCATACAGT +
Preference number: 5 (lower is better)
Translates to: SKLQLPNSQKCGSTSPQNLNAYG*LETPYS
Trigger: ACTGTATGGGGTTTCCAGCAATCCATATGCATTTAA...ATTCTGGGGTGATGTGGAGCCACATTTTTGTGAGTTGGGCAGCTGCAGTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS-3UTR CAA 90 bp CTTGATGTGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGTTGGGTTTTGTAACTTaGTGTGGAAGAGCGAAATAT +
Preference number: 5 (lower is better)
Translates to: LDVRPYHDPGTTERIPSWLGFVT*CGRAKY
Trigger: ATATTTCGCTCTTCCACACAAAGTTACAAAACCCAA...CCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCACATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTGTTTATCAATATTTGTaGCTTGGGGTTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSVYQYL*LGVLGH
Trigger: GTGGCCCAGAACCCCAAGCAACAAATATTGATAAAC...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCTCAAGGTCACTCTGTTaGAACCCAAATCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSSRSLC*NPNPFL
Trigger: CAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGA...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp TTGTGCCGGAACACACTTTCCATGACACGCTTAATTTCTAGTCTCTaGTCCAAGTTTTCACTGTGTAAACCAAACTCCTGCACCACTCTG +
Preference number: 5 (lower is better)
Translates to: LCRNTLSMTRLISSL*SKFSLCKPNSCTTL
Trigger: CAGAGTGGTGCAGGAGTTTGGTTTACACAGTGAAAACTTGGATCAGAGACTAGAAATTAAGCGTGTCATGGAAAGTGTGTTCCGGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS-3UTR CAA 90 bp GAAATCAAAAAGGGGATGTGTAGGGAAAGAGGGCTAACTCCTCTGGTGAGCAGCTTGGGTTTTGTAACTTaGTGTGGAAGAGCGAAATAT +
Preference number: 5 (lower is better)
Translates to: EIKKGMCRERGLTPLVSSLGFVT*CGRAKY
Trigger: ATATTTCGCTCTTCCACACAAAGTTACAAAACCCAA...GCTGCTCACCAGAGGAGTTAGCCCTCTTTCCCTACACATCCCCTTTTTGATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp AGAGGGCTAACTCCTCTGGTGAGCAGCACACTATTTTTAGAGTGCTTTGAAAGACCAGTTTATCAATATTaGTTGCTTGGGGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RGLTPLVSSTLFLECFERPVYQY*LLGVLG
Trigger: GCCCAGAACCCCAAGCAACAAATATTGATAAACTGG...TCTTTCAAAGCACTCTAAAAATAGTGTGCTGCTCACCAGAGGAGTTAGCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TGCGTCCATACCACGATCCAGGAACAACAGAGAGAATCCCCTCTTGGAAATCAATCAAGGTCACTCTGTTaGAACCCAAATCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: CVHTTIQEQQRESPLGNQSRSLC*NPNPFL
Trigger: CAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGA...TTGATTTCCAAGAGGGGATTCTCTCTGTTGTTCCTGGATCGTGGTATGGACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTACTACCTGGAGAGCCTTaGAACTGTGGGCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVLPGEP*NCGHSF
Trigger: AAAGGAATGCCCACAGTTCAAAGGCTCTCCAGGTAG...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224480.2
CDS TCA 90 bp TTTTCCTTAAGGTTCTTCTTGTGCCTCTTCTCCTTGATGTGCTTATaGGCAAACGGAATGGAGTCAATCAAAGCATCGCACAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: FSLRFFLCLFSLMCL*ANGMESIKASHSLQ
Trigger: CTGCAAACTGTGCGATGCTTTGATTGACTCCATTCCGTTTGCTCATAAGCACATCAAGGAGAAGAGGCACAAGAAGAACCTTAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS TCA 90 bp CCATCAACAAGTATTTCTGGTTTCTTTTCACCTTTGTATATCTCTTaGAGCACGGGGATGACAGGTGGAGACCTTTGCTGGAGGAAGTAT +
Preference number: 5 (lower is better)
Translates to: PSTSISGFFSPLYIS*STGMTGGDLCWRKY
Trigger: ATACTTCCTCCAGCAAAGGTCTCCACCTGTCATCCCCGTGCTTCAAGAGATATACAAAGGTGAAAAGAAACCAGAAATACTTGTTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 90 bp CTTATTTGGATGAAGAAAATAGCACAGACACACAGTCTAGAGACTTaGGGCATACCAGGACTTCCTGCTTCCATTTCTGACATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LIWMKKIAQTHSLET*GIPGLPASISDMAS
Trigger: AGAAGCCATGTCAGAAATGGAAGCAGGAAGTCCTGGTATGCCTCAAGTCTCTAGACTGTGTGTCTGTGCTATTTTCTTCATCCAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2
CDS CCA 90 bp TCCCAGCCACAGCTGCCCGACAGGTTCTGTATTTTTCCCATATTCTaGCCAACAAGTGGGCAGTTCATTTATTTGATCGAAAAAGTAAAT +
Preference number: 5 (lower is better)
Translates to: SQPQLPDRFCIFPIF*PTSGQFIYLIEKVN
Trigger: ATTTACTTTTTCGATCAAATAAATGAACTGCCCACTTGTTGGCCAGAATATGGGAAAAATACAGAACCTGTCGGGCAGCTGTGGCTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCGAGCTGTTAGGTGCTTaGTGGTCAGCCAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALELLGA*WSAKRF
Trigger: AAAACGCTTGGCTGACCACAAAGCACCTAACAGCTC...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp AGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCTAATTTCTGTGTAAATAGGGGTCTTCAATaGCGATACGCTTTTTGGGCC +
Preference number: 5 (lower is better)
Translates to: SLFDLQRFVKALHPNFCVNRGLQ*RYAFWA
Trigger: GGCCCAAAAAGCGTATCGCAATTGAAGACCCCTATT...TACACAGAAATTAGGGTGGAGAGCTTTTACAAACCTCTGAAGATCAAAGAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp ATTAACAGTTTAGAGAGGGCTCCAGTCAGACCAGAAGGTTGCCAATCAAACTTGAAAAGTATGCCAGTTTaGAGGGGTTGTCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: INSLERAPVRPEGCQSNLKSMPV*RGCPLE
Trigger: TTCCAAAGGACAACCCCTCAAAACTGGCATACTTTT...CAAGTTTGATTGGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp TTGAAGCCTGATCTGTGTCACTGTGTCCTGTGCCATGAACCTAATTTCCCAAGTTCCTTTGGAAATCCTTaGACTGGAATTCCAAATACT +
Preference number: 5 (lower is better)
Translates to: LKPDLCHCVLCHEPNFPSSFGNP*TGIPNT
Trigger: AGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGA...ACTTGGGAAATTAGGTTCATGGCACAGGACACAGTGACACAGATCAGGCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCGCCAGTTTTGAGGGGTaGTCCTTTGGAAATCCTTTG +
Preference number: 5 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALASFEG*SFGNPL
Trigger: CAAAGGATTTCCAAAGGACAACCCCTCAAAACTGGC...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS-3UTR CAA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCGTTTATCAATATTTGTaGCTTGGGGTTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALVYQYL*LGVLGH
Trigger: GTGGCCCAGAACCCCAAGCAACAAATATTGATAAAC...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 90 bp TTGATCTTTGTGGTTATCATTCATCCAAGCAGGCTGACTGTAAATTaGGTTTTTAAATGCATATGGATTGCTGGAAACCCCATACAGTCC +
Preference number: 5 (lower is better)
Translates to: LIFVVIIHPSRLTVN*VFKCIWIAGNPIQS
Trigger: GGACTGTATGGGGTTTCCAGCAATCCATATGCATTTAAAAACCCAATTTACAGTCAGCCTGCTTGGATGAATGATAACCACAAAGATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000225179.2
ENSMUST00000225576.2
CDS-3UTR CAA 90 bp CTTCATTTTTATGAGCACAACAGTTCTGTCAATTACTTAGAGAAGGAAGCCCTCAAAAGTATGCCAGTTTaGAGGGGTTGTCCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LHFYEHNSSVNYLEKEALKSMPV*RGCPLE
Trigger: TTCCAAAGGACAACCCCTCAAAACTGGCATACTTTT...GAGGGCTTCCTTCTCTAAGTAATTGACAGAACTGTTGTGCTCATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp CGTCCTGAGGAGCTTCTCCCGGCCCAGGTCGACAGCTaGCCTCACTGGCTTGGCTTTCGCAGCTGCACACGG +
Preference number: 6 (lower is better)
Translates to: RPEELLPAQVDS*PHWLGFRSCTR
Trigger: CCGTGTGCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGCTGTCGACCTGGGCCGGGAGAAGCTCCTCAGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp TGCTGTGGCATCCTCCAAACCCTCACAACTGACCTCTaGCTGGACACAGCCAGAGCTCTCCTGGTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: CCGILQTLTTDL*LDTARALLVGW
Trigger: CCAGCCCACCAGGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTTGGAGGATGCCACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 72 bp AATGGCGCTGCCAACTGCATGTATCTGGGAGGGCGCTaGCGGGGGCAGTGTGGTGAGCAATTCTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: NGAANCMYLGGR*RGQCGEQFFLL
Trigger: CAGGAGGAAGAATTGCTCACCACACTGCCCCCGCCAGCGCCCTCCCAGATACATGCAGTTGGCAGCGCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 72 bp GTGGCATCCTCCAAACCCTCACAACTGACCTCTGCCTaGACACAGCCAGAGCTCTCCTGGTGGGCTGGGATG +
Preference number: 6 (lower is better)
Translates to: VASSKPSQLTSA*TQPELSWWAGM
Trigger: CATCCCAGCCCACCAGGAGAGCTCTGGCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTTGGAGGATGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp CGTGGTCGCCTTTTCAGCCTGTCGATGCAGTCTCTCTaGAGCCGTTCCTCAGCCTGCTGGAGGCCCAACAGC +
Preference number: 6 (lower is better)
Translates to: RGRLFSLSMQSL*SRSSACWRPNS
Trigger: GCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAGGCTGAAAAGGCGACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CAA 72 bp TTCTCCCGGCCCAGGTCGACAGCTGCCCTCACTGGCTaGGCTTTCGCAGCTGCACACGGTGTGAGCTTATCT +
Preference number: 6 (lower is better)
Translates to: FSRPRSTAALTG*AFAAAHGVSLS
Trigger: AGATAAGCTCACACCGTGTGCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGCTGTCGACCTGGGCCGGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp GTGGTCGCCTTTTCAGCCTGTCGATGCAGTCTCTCTTaGGCCGTTCCTCAGCCTGCTGGAGGCCCAACAGCT +
Preference number: 6 (lower is better)
Translates to: VVAFSACRCSLS*AVPQPAGGPTA
Trigger: AGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAGGCTGAAAAGGCGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CAA 90 bp GGGCAGTTTCGTGGTCGCCTTTTCAGCCTGTCGATGCAGTCTCTCTaGAGCCGTTCCTCAGCCTGCTGGAGGCCCAACAGCTCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: GQFRGRLFSLSMQSL*SRSSACWRPNSSLV
Trigger: AACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAGGCTGAAAAGGCGACCACGAAACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 72 bp ACTCCAGAGTGTTGTCTGCCTGCAGACCACACAGGCTaGCACAGTTCTGCAGTTCTGGGTGCTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: TPECCLPADHTG*HSSAVLGACCC
Trigger: GCAGCAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 90 bp TCTCTCTTGAGCCGTTCCTCAGCCTGCTGGAGGCCCAACAGCTCCTaGGTTGAAAGGACAGACTCGTCGATGACAGGACCGTCCAGATCT +
Preference number: 6 (lower is better)
Translates to: SLLSRSSACWRPNSS*VERTDSSMTGPSRS
Trigger: AGATCTGGACGGTCCTGTCATCGACGAGTCTGTCCTTTCAACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 72 bp CTGTCGATGCAGTCTCTCTTGAGCCGTTCCTCAGCCTaGTGGAGGCCCAACAGCTCCTTGGTTGAAAGGACA +
Preference number: 6 (lower is better)
Translates to: LSMQSLLSRSSA*WRPNSSLVERT
Trigger: TGTCCTTTCAACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 72 bp TCGATGCAGTCTCTCTTGAGCCGTTCCTCAGCCTGCTaGAGGCCCAACAGCTCCTTGGTTGAAAGGACAGAC +
Preference number: 6 (lower is better)
Translates to: SMQSLLSRSSAC*RPNSSLVERTD
Trigger: GTCTGTCCTTTCAACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 72 bp GAGAACTTGGGTGTCAGGGGTGGCAACGGCTCCAGCTaGACCCTCTTGAAGTCCTCAGGACAGTCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: ENLGVRGGNGSS*TLLKSSGQSFF
Trigger: AAAGAAGGACTGTCCTGAGGACTTCAAGAGGGTCCAGCTGGAGCCGTTGCCACCCCTGACACCCAAGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 90 bp GCCTGCAGACCACACAGGCTGCCACAGTTCTGCAGTTCTGGGTGCTaGCTGCTGCTTAAACCTTGGTCATCAGTGCTCAAAGGATGCTTG +
Preference number: 6 (lower is better)
Translates to: ACRPHRLPQFCSSGC*LLLKPWSSVLKGCL
Trigger: CAAGCATCCTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp CCAACAGCTCCTTGGTTGAAAGGACAGACTCGTCGATaGCAGGACCGTCCAGATCTCCATCCTGCTCACTGT +
Preference number: 6 (lower is better)
Translates to: PTAPWLKGQTRR*QDRPDLHPAHC
Trigger: ACAGTGAGCAGGATGGAGATCTGGACGGTCCTGTCATCGACGAGTCTGTCCTTTCAACCAAGGAGCTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS TCA 72 bp TCCTCCTCACCTGACCCAGCATACCTGCTGTCCACCTaGTGCTCATTAGCAACCCCCTCCTCATCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: SSSPDPAYLLST*CSLATPSSSSV
Trigger: TACAGAAGATGAGGAGGGGGTTGCTAATGAGCATCAGGTGGACAGCAGGTATGCTGGGTCAGGTGAGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp GTCGCCTCACTTTCCTCCTCATGGGACAGTCCTTCATaGAGTGCCCGATTTTCCCACAAATTCGGCAGCACC +
Preference number: 6 (lower is better)
Translates to: VASLSSSWDSPS*SARFSHKFGST
Trigger: GGTGCTGCCGAATTTGTGGGAAAATCGGGCACTTCATGAAGGACTGTCCCATGAGGAGGAAAGTGAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp TGGGTGCCTCCTCTTTTGCTGAGCTGGTGTCCCCTGTaGTGTTGTCAGTGTATTCCCAGACCACAGAGTCTT +
Preference number: 6 (lower is better)
Translates to: WVPPLLLSWCPL*CCQCIPRPQSL
Trigger: AAGACTCTGTGGTCTGGGAATACACTGACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
ENSMUST00000225241.2
CDS GCA 72 bp GACTTCCTCGTTGTCACTTCCTGTTTCCGGAAGCTCTaGTGTGGCATCCTCCAAACCCTCACAACTGACCTC +
Preference number: 6 (lower is better)
Translates to: DFLVVTSCFRKL*CGILQTLTTDL
Trigger: GAGGTCAGTTGTGAGGGTTTGGAGGATGCCACAGCAGAGCTTCCGGAAACAGGAAGTGACAACGAGGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 72 bp TCCATCCTGCTCACTGTCCTCCGTTCTAGTCCTCCGTaGCTTACGAGGTCTGGACCGCTGTTTCTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: SILLTVLRSSPP*LTRSGPLFLVF
Trigger: GAAAACAAGAAACAGCGGTCCAGACCTCGTAAGCCACGGAGGACTAGAACGGAGGACAGTGAGCAGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 72 bp GATGATACACCTGTCCCTTCTTTGCTGCAGTCTCTTTaGGTGCCTCCTCTTTTGCTGAGCTGGTGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: DDTPVPSLLQSL*VPPLLLSWCPL
Trigger: CAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAAGAAGGGACAGGTGTATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225241.2
CDS CAA 72 bp CCTTCTTTGCTGCAGTCTCTTTGGGTGCCTCCTCTTTaGCTGAGCTGGTGTCCCCTGTGCTGTTGTCAGTGT +
Preference number: 6 (lower is better)
Translates to: PSLLQSLWVPPL*LSWCPLCCCQC
Trigger: ACACTGACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
ENSMUST00000225241.2
CDS TCA 72 bp CTTTGCTGCAGTCTCTTTGGGTGCCTCCTCTTTTGCTaGGCTGGTGTCCCCTGTGCTGTTGTCAGTGTATTC +
Preference number: 6 (lower is better)
Translates to: LCCSLFGCLLFC*AGVPCAVVSVF
Trigger: GAATACACTGACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
ENSMUST00000225241.2
CDS TCA 72 bp CAAGTCATCTTCTTCAGAGAGGGCATCCTCCTCACCTaGCCCAGCATACCTGCTGTCCACCTGATGCTCATT +
Preference number: 6 (lower is better)
Translates to: QVIFFREGILLT*PSIPAVHLMLI
Trigger: AATGAGCATCAGGTGGACAGCAGGTATGCTGGGTCAGGTGAGGAGGATGCCCTCTCTGAAGAAGATGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp TCGTTTCCTGCACTTACTTTACAAAGAAGGCCGCTTTaGTTATCTCTGCACACCACCACAGGGACCCGGGCA +
Preference number: 6 (lower is better)
Translates to: SFPALTLQRRPL*LSLHTTTGTRA
Trigger: TGCCCGGGTCCCTGTGGTGGTGTGCAGAGATAAGCAAAGCGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 72 bp TCCTCTTCTTCCTCCTCCTCCTCCTCATCATCAAAGTaGATGGCTGCAGATGTGCGACTCTGTACTGAAGGG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSSK*MAADVRLCTEG
Trigger: CCCTTCAGTACAGAGTCGCACATCTGCAGCCATGCACTTTGATGATGAGGAGGAGGAGGAGGAAGAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp TTCGTTTCCTGCACTTACTTTACAAAGAAGGCCGCTTaGCTTATCTCTGCACACCACCACAGGGACCCGGGC +
Preference number: 6 (lower is better)
Translates to: FVSCTYFTKKAA*LISAHHHRDPG
Trigger: GCCCGGGTCCCTGTGGTGGTGTGCAGAGATAAGCAAAGCGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CAA 72 bp GCCTCCTCTTTTGCTGAGCTGGTGTCCCCTGTGCTGTaGTCAGTGTATTCCCAGACCACAGAGTCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: ASSFAELVSPVL*SVYSQTTESFS
Trigger: TGAGAAAGACTCTGTGGTCTGGGAATACACTGACAACAGCACAGGGGACACCAGCTCAGCAAAAGAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
ENSMUST00000225241.2
CDS CAA 72 bp CCACACAGGCTGCCACAGTTCTGCAGTTCTGGGTGCTaGCTGCTGCTTAAACCTTGGTCATCAGTGCTCAAA +
Preference number: 6 (lower is better)
Translates to: PHRLPQFCSSGC*LLLKPWSSVLK
Trigger: TTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 90 bp ACGGAATGGAGTCAATCAAAGCATCGCACAGTTTGCAGGTATACTTaGCTGTCGGGCAGTTTCGTGGTCGCCTTTTCAGCCTGTCGATGC +
Preference number: 6 (lower is better)
Translates to: TEWSQSKHRTVCRYT*LSGSFVVAFSACRC
Trigger: GCATCGACAGGCTGAAAAGGCGACCACGAAACTGCCCGACAGCAAAGTATACCTGCAAACTGTGCGATGCTTTGATTGACTCCATTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CAA 90 bp CCAAGCGTTTTCGTTTCCTGCACTTACTTTACAAAGAAGGCCGCTTaGCTTATCTCTGCACACCACCACAGGGACCCGGGCATGGAAATC +
Preference number: 6 (lower is better)
Translates to: PSVFVSCTYFTKKAA*LISAHHHRDPGMEI
Trigger: GATTTCCATGCCCGGGTCCCTGTGGTGGTGTGCAGAGATAAGCAAAGCGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CAA 90 bp GAGAAAAATCCTTGTAACACTGGACGCAGACTTGATCTAAGATGTTaGAGAACTTGGGTGTCAGGGGTGGCAACGGCTCCAGCTGGACCC +
Preference number: 6 (lower is better)
Translates to: EKNPCNTGRRLDLRC*RTWVSGVATAPAGP
Trigger: GGGTCCAGCTGGAGCCGTTGCCACCCCTGACACCCAAGTTCTCAAACATCTTAGATCAAGTCTGCGTCCAGTGTTACAAGGATTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp GATTCCTGCTGGGTCCTCTTCACTGAGGCTCTCCCCTaGGTCATATATTTACTGGAAAGGCTACCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: DSCWVLFTEALP*VIYLLERLPGE
Trigger: CTCTCCAGGTAGCCTTTCCAGTAAATATATGACTCAGGGGAGAGCCTCAGTGAAGAGGACCCAGCAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224480.2
CDS GCA 72 bp CACTTACTTTACAAAGAAGGCCGCTTTGCTTATCTCTaGACACCACCACAGGGACCCGGGCATGGAAATCAG +
Preference number: 6 (lower is better)
Translates to: HLLYKEGRFAYL*TPPQGPGHGNQ
Trigger: CTGATTTCCATGCCCGGGTCCCTGTGGTGGTGTGCAGAGATAAGCAAAGCGGCCTTCTTTGTAAAGTAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 72 bp ACAGGCTGCCACAGTTCTGCAGTTCTGGGTGCTTGCTaGTGCTTAAACCTTGGTCATCAGTGCTCAAAGGAT +
Preference number: 6 (lower is better)
Translates to: TGCHSSAVLGAC*CLNLGHQCSKD
Trigger: ATCCTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAACTGTGGCAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp TCCACATTCTCCTGTATCTTCACCCTTAGCAGGCTCTaGCAAGTCATCTTCTTCAGAGAGGGCATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: STFSCIFTLSRL*QVIFFREGILL
Trigger: GAGGAGGATGCCCTCTCTGAAGAAGATGACTTGGCAGAGCCTGCTAAGGGTGAAGATACAGGAGAATGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp CTCACTTTCCTCCTCATGGGACAGTCCTTCATGAAGTaGCCGATTTTCCCACAAATTCGGCAGCACCTGTCA +
Preference number: 6 (lower is better)
Translates to: LTFLLMGQSFMK*PIFPQIRQHLS
Trigger: TGACAGGTGCTGCCGAATTTGTGGGAAAATCGGGCACTTCATGAAGGACTGTCCCATGAGGAGGAAAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 72 bp CTTCTTCCTCCTCCTCCTCCTCATCATCAAAGTGCATaGCTGCAGATGTGCGACTCTGTACTGAAGGGGAAA +
Preference number: 6 (lower is better)
Translates to: LLPPPPPHHQSA*LQMCDSVLKGK
Trigger: TTTCCCCTTCAGTACAGAGTCGCACATCTGCAGCCATGCACTTTGATGATGAGGAGGAGGAGGAGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp CAGCTATTACACTCTTCAGCTACTAACTCCAGAGTGTaGTCTGCCTGCAGACCACACAGGCTGCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: QLLHSSATNSRV*SACRPHRLPQF
Trigger: GAACTGTGGCAGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGAGTTAGTAGCTGAAGAGTGTAATAGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp CGGGGCGATCAATACTACAAAGCTTTGCCCAGTATCTaGATGCAATCACCAGAGGAACCAGCCTTGGCTCTA +
Preference number: 6 (lower is better)
Translates to: RGDQYYKALPSI*MQSPEEPALAL
Trigger: TAGAGCCAAGGCTGGTTCCTCTGGTGATTGCATTCAGATACTGGGCAAAGCTTTGTAGTATTGATCGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
ENSMUST00000225241.2
CDS TCA 72 bp ACCCTCTTGAAGTCCTCAGGACAGTCCTTCTTTAGGTaGCCTTCTCGCTTACACAAGCTGCACACTACTGTG +
Preference number: 6 (lower is better)
Translates to: TLLKSSGQSFFR*PSRLHKLHTTV
Trigger: CACAGTAGTGTGCAGCTTGTGTAAGCGAGAAGGTCACCTAAAGAAGGACTGTCCTGAGGACTTCAAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp CTTGGCTGTTGTGATAGGAAGGATATTCCTCAACCCTaGGTGCTTTCTGAGGACTCGAGCCAGCTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: LGCCDRKDIPQP*VLSEDSSQLLN
Trigger: ATTGAGGAGCTGGCTCGAGTCCTCAGAAAGCACTCAGGGTTGAGGAATATCCTTCCTATCACAACAGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp GTCAATCAAAGCATCGCACAGTTTGCAGGTATACTTTaGTGTCGGGCAGTTTCGTGGTCGCCTTTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: VNQSIAQFAGIL*CRAVSWSPFQP
Trigger: AGGCTGAAAAGGCGACCACGAAACTGCCCGACAGCAAAGTATACCTGCAAACTGTGCGATGCTTTGATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS GCA 72 bp ACCAGCCTTGGCTCTAGTTTTCCAAGAGCTGTTAGGTaGTTTGTGGTCAGCCAAGCGTTTTCGTTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: TSLGSSFPRAVR*FVVSQAFSFPA
Trigger: TGCAGGAAACGAAAACGCTTGGCTGACCACAAAGCACCTAACAGCTCTTGGAAAACTAGAGCCAAGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 72 bp CATATGGATTGCTGGAAACCCCATACAGTCCTTTCCTaGGGGTGTTCCCATAGTTCCCGGGTGATATCTTCT +
Preference number: 6 (lower is better)
Translates to: HMDCWKPHTVLS*GCSHSSRVISS
Trigger: AGAAGATATCACCCGGGAACTATGGGAACACCCCCAGGAAAGGACTGTATGGGGTTTCCAGCAATCCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000071703.6
ENSMUST00000225179.2
ENSMUST00000225576.2
ENSMUST00000225987.2
CDS CAA 90 bp GCTGCTGCTTCTTCTAGTTCCTCAGCGCCTTCTATCCTCTCTTCATaGACCTCAGCCTTGTTGTCCAAAGAGGCACAGCTATTACACTCT +
Preference number: 6 (lower is better)
Translates to: AAASSSSSAPSILSS*TSALLSKEAQLLHS
Trigger: AGAGTGTAATAGCTGTGCCTCTTTGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAGAAGGCGCTGAGGAACTAGAAGAAGCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp CTTCTAGTTCCTCAGCGCCTTCTATCCTCTCTTCATTaGCCTCAGCCTTGTTGTCCAAAGAGGCACAGCTAT +
Preference number: 6 (lower is better)
Translates to: LLVPQRLLSSLH*PQPCCPKRHSY
Trigger: ATAGCTGTGCCTCTTTGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAGAAGGCGCTGAGGAACTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp TGCCTCTGGACGCGTCACCGATGTCACACATCTTTGTaGACACTTTCATGGTGTAGCACAGATACTTCACTC +
Preference number: 6 (lower is better)
Translates to: CLWTRHRCHTSL*TLSWCSTDTSL
Trigger: GAGTGAAGTATCTGTGCTACACCATGAAAGTGTTCACAAAGATGTGTGACATCGGTGACGCGTCCAGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS GCA 72 bp CAAACGGAATGGAGTCAATCAAAGCATCGCACAGTTTaGAGGTATACTTTGCTGTCGGGCAGTTTCGTGGTC +
Preference number: 6 (lower is better)
Translates to: QTEWSQSKHRTV*RYTLLSGSFVV
Trigger: GACCACGAAACTGCCCGACAGCAAAGTATACCTGCAAACTGTGCGATGCTTTGATTGACTCCATTCCGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 72 bp TTCTGCAGTTCTGGGTGCTTGCTGCTGCTTAAACCTTaGTCATCAGTGCTCAAAGGATGCTTGGTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: FCSSGCLLLLKP*SSVLKGCLVFL
Trigger: AAGGAAGACCAAGCATCCTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGCAAGCACCCAGAACTGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 72 bp TACAAGCTGATGTCCACTTCCAGACCACTTCTTAGATaGAAGAACTTCACGATGGGCACCTTGGCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: YKLMSTSRPLLR*KNFTMGTLAVV
Trigger: CACAACAGCCAAGGTGCCCATCGTGAAGTTCTTCCATCTAAGAAGTGGTCTGGAAGTGGACATCAGCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp GCAAACGGAATGGAGTCAATCAAAGCATCGCACAGTTaGCAGGTATACTTTGCTGTCGGGCAGTTTCGTGGT +
Preference number: 6 (lower is better)
Translates to: ANGMESIKASHS*QVYFAVGQFRG
Trigger: ACCACGAAACTGCCCGACAGCAAAGTATACCTGCAAACTGTGCGATGCTTTGATTGACTCCATTCCGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CAA 72 bp GCGCCTTCTATCCTCTCTTCATTGACCTCAGCCTTGTaGTCCAAAGAGGCACAGCTATTACACTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: APSILSSLTSAL*SKEAQLLHSSA
Trigger: AGCTGAAGAGTGTAATAGCTGTGCCTCTTTGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAGAAGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp TCTTCTAGTTCCTCAGCGCCTTCTATCCTCTCTTCATaGACCTCAGCCTTGTTGTCCAAAGAGGCACAGCTA +
Preference number: 6 (lower is better)
Translates to: SSSSSAPSILSS*TSALLSKEAQL
Trigger: TAGCTGTGCCTCTTTGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAGAAGGCGCTGAGGAACTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 90 bp TCTAGTTCCTCAGCGCCTTCTATCCTCTCTTCATTGACCTCAGCCTaGTTGTCCAAAGAGGCACAGCTATTACACTCTTCAGCTACTAAC +
Preference number: 6 (lower is better)
Translates to: SSSSAPSILSSLTSA*LSKEAQLLHSSATN
Trigger: GTTAGTAGCTGAAGAGTGTAATAGCTGTGCCTCTTTGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAGAAGGCGCTGAGGAACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 90 bp ACTTCCAGACCACTTCTTAGATGGAAGAACTTCACGATGGGCACCTaGGCTGTTGTGATAGGAAGGATATTCCTCAACCCTGAGTGCTTT +
Preference number: 6 (lower is better)
Translates to: TSRPLLRWKNFTMGT*AVVIGRIFLNPECF
Trigger: AAAGCACTCAGGGTTGAGGAATATCCTTCCTATCACAACAGCCAAGGTGCCCATCGTGAAGTTCTTCCATCTAAGAAGTGGTCTGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp TCAGCGCCTTCTATCCTCTCTTCATTGACCTCAGCCTaGTTGTCCAAAGAGGCACAGCTATTACACTCTTCA +
Preference number: 6 (lower is better)
Translates to: SAPSILSSLTSA*LSKEAQLLHSS
Trigger: TGAAGAGTGTAATAGCTGTGCCTCTTTGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAGAAGGCGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp CCACTTCTTAGATGGAAGAACTTCACGATGGGCACCTaGGCTGTTGTGATAGGAAGGATATTCCTCAACCCT +
Preference number: 6 (lower is better)
Translates to: PLLRWKNFTMGT*AVVIGRIFLNP
Trigger: AGGGTTGAGGAATATCCTTCCTATCACAACAGCCAAGGTGCCCATCGTGAAGTTCTTCCATCTAAGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp AGGTTCTTCTTGTGCCTCTTCTCCTTGATGTGCTTATaGGCAAACGGAATGGAGTCAATCAAAGCATCGCAC +
Preference number: 6 (lower is better)
Translates to: RFFLCLFSLMCL*ANGMESIKASH
Trigger: GTGCGATGCTTTGATTGACTCCATTCCGTTTGCTCATAAGCACATCAAGGAGAAGAGGCACAAGAAGAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS TCA 72 bp TCAATGGCTGAGTATGCAGACAAGAGCCTTGTGTTATaGAGCGCCAGTGTGTTATACAAGCTGATGTCCACT +
Preference number: 6 (lower is better)
Translates to: SMAEYADKSLVL*SASVLYKLMST
Trigger: AGTGGACATCAGCTTGTATAACACACTGGCGCTTCATAACACAAGGCTCTTGTCTGCATACTCAGCCATTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp TCTTTTCACCTTTGTATATCTCTTGAAGCACGGGGATaGCAGGTGGAGACCTTTGCTGGAGGAAGTATAGCA +
Preference number: 6 (lower is better)
Translates to: SFHLCISLEARG*QVETFAGGSIA
Trigger: TGCTATACTTCCTCCAGCAAAGGTCTCCACCTGTCATCCCCGTGCTTCAAGAGATATACAAAGGTGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS TCA 72 bp AGTATTTCTGGTTTCTTTTCACCTTTGTATATCTCTTaGAGCACGGGGATGACAGGTGGAGACCTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SISGFFSPLYIS*STGMTGGDLCW
Trigger: CCAGCAAAGGTCTCCACCTGTCATCCCCGTGCTTCAAGAGATATACAAAGGTGAAAAGAAACCAGAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 72 bp CAGCTGCCCGACAGGTTCTGTATTTTTCCCATATTCTaGCCAACAAGTGGGCAGTTCATTTATTTGATCGAA +
Preference number: 6 (lower is better)
Translates to: QLPDRFCIFPIF*PTSGQFIYLIE
Trigger: TTCGATCAAATAAATGAACTGCCCACTTGTTGGCCAGAATATGGGAAAAATACAGAACCTGTCGGGCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CCA 72 bp TCATGTAAAAGCACTGCCTGGAGAGCCTTTGAACTGTaGGCATTCCTTTTTAATGTGTCCTTCTCTTCCACA +
Preference number: 6 (lower is better)
Translates to: SCKSTAWRAFEL*AFLFNVSFSST
Trigger: TGTGGAAGAGAAGGACACATTAAAAAGGAATGCCCACAGTTCAAAGGCTCTCCAGGCAGTGCTTTTACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CCA 72 bp TTTACTGGAAAGGCTACCTGGAGAGCCTTTGAACTGTaGGCATTCCTTTTTAATGTGTCCTTCTCTTCCACA +
Preference number: 6 (lower is better)
Translates to: FTGKATWRAFEL*AFLFNVSFSST
Trigger: TGTGGAAGAGAAGGACACATTAAAAAGGAATGCCCACAGTTCAAAGGCTCTCCAGGTAGCCTTTCCAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224480.2
CDS TCA 72 bp ATTCTTGAACAAGTAAGAGGACATCTGGCTGAGACATaGCAGCTGGAAACTGAACATCAATGTTCACGTCAG +
Preference number: 6 (lower is better)
Translates to: ILEQVRGHLAET*QLETEHQCSRQ
Trigger: CTGACGTGAACATTGATGTTCAGTTTCCAGCTGTCATGTCTCAGCCAGATGTCCTCTTACTTGTTCAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS TCA 72 bp AACACACTTTCCATGACACGCTTAATTTCTAGTCTCTaGTCCAAGTTTTCACTGTGTAAACCAAACTCCTGC +
Preference number: 6 (lower is better)
Translates to: NTLSMTRLISSL*SKFSLCKPNSC
Trigger: GCAGGAGTTTGGTTTACACAGTGAAAACTTGGATCAGAGACTAGAAATTAAGCGTGTCATGGAAAGTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071703.6
CDS CAA 72 bp TATGCCAGTTTTGAGGGGTTGTCCTTTGGAAATCCTTaGACTGGAATTCCAAATACTCTTCTACCATTGATA +
Preference number: 6 (lower is better)
Translates to: YASFEGLSFGNP*TGIPNTLLPLI
Trigger: TATCAATGGTAGAAGAGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGACAACCCCTCAAAACTGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071703.6
ENSMUST00000224480.2
CDS CAA 72 bp ATTAAAGGGCTCATGACTGAAAAGAACAACACTTATTaGGATGAAGAAAATAGCACAGACACACAGTCTAGA +
Preference number: 6 (lower is better)
Translates to: IKGLMTEKNNTY*DEENSTDTQSR
Trigger: TCTAGACTGTGTGTCTGTGCTATTTTCTTCATCCAAATAAGTGTTGTTCTTTTCAGTCATGAGCCCTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225576.2