Pregenerated sensors for TUNAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000097929Ensembl transcript IDs: ENSMUST00000180458.9, ENSMUST00000180503.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTGCTCACCGCCGGTGCAGAAGGCTGGCCTTTCCAGCATCCCGCTaGGTCCCCTGTGGGAGTTCCTTGTGGCCTGAAGGAGTCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: RAHRRCRRLAFPASR*VPCGSSLWPEGVPL Trigger: CAGTGGGACTCCTTCAGGCCACAAGGAACTCCCACAGGGGACCCAGCGGGATGCTGGAAAGGCCAGCCTTCTGCACCGGCGGTGAGCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CCA 90 bp | GCGGAGCTGCGACTACCCCACGCATCCTCTTTCCAGTGTGAGATGTaGTCAGCACTCCAGGGTGAAGCACTTCCTCACCCTCGTGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: AELRLPHASSFQCEM*SALQGEALPHPRAH Trigger: GTGAGCACGAGGGTGAGGAAGTGCTTCACCCTGGAGTGCTGACCACATCTCACACTGGAAAGAGGATGCGTGGGGTAGTCGCAGCTCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR TCA 90 bp | TCTCACAGCGGGGAGGTCTCACTTCCCTCATATCCCACTGACTTCTaGAGAGATCCCACCCTCCACCTCCCCAGGCAGCTCACCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SHSGEVSLPSYPTDF*RDPTLHLPRQLTKE Trigger: TTCCTTGGTGAGCTGCCTGGGGAGGTGGAGGGTGGGATCTCTTCAGAAGTCAGTGGGATATGAGGGAAGTGAGACCTCCCCGCTGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR GCA 90 bp | ACAGAAGGACGGGTCCATCAGGTGACCCGTCAGAAAGTTCGAAGGTaGATTGATGGAGCATTGTGTGGTCTTCAAACCTGCTGGTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: TEGRVHQVTRQKVRR*IDGALCGLQTCWSP Trigger: GGGGGACCAGCAGGTTTGAAGACCACACAATGCTCCATCAATGCACCTTCGAACTTTCTGACGGGTCACCTGATGGACCCGTCCTTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR GCA 90 bp | TGTGGGAGTTCCTTGTGGCCTGAAGGAGTCCCACTGGATTCATTGTaGTTCAGAGTGTCTGCTCCTCACAGAAGGACGGGTCCATCAGGT | + |
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Preference number: 1 (lower is better) Translates to: CGSSLWPEGVPLDSL*FRVSAPHRRTGPSG Trigger: ACCTGATGGACCCGTCCTTCTGTGAGGAGCAGACACTCTGAAGCACAATGAATCCAGTGGGACTCCTTCAGGCCACAAGGAACTCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR TCA 90 bp | GGGGCAGGGATGGGAAGGAAGAAGAACCTGAGGTACGACAAGGCTTaGGATGAGCTGAGGCAACCGGATGACTACAGACAAAGACGTCTT | + |
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Preference number: 1 (lower is better) Translates to: GAGMGRKKNLRYDKA*DELRQPDDYRQRRL Trigger: AAGACGTCTTTGTCTGTAGTCATCCGGTTGCCTCAGCTCATCTCAAGCCTTGTCGTACCTCAGGTTCTTCTTCCTTCCCATCCCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CCA 90 bp | AAGCCGCTCGACAATCTTGAAGCACACACCAGCCAAGACCACAGCTaGTATTATGGGAAAATGTCCTCTAGACAAGAGGTGAGGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: KPLDNLEAHTSQDHS*YYGKMSSRQEVRRR Trigger: CCTCCTCCTCACCTCTTGTCTAGAGGACATTTTCCCATAATACCAGCTGTGGTCTTGGCTGGTGTGTGCTTCAAGATTGTCGAGCGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CCA 90 bp | GGTGAGAGAGAAAGACTCTCCCTCTCACCAGCAACTATGAAAGCCTaGTTACTTGTGTACACGGTATCTGTCCTTCTGGTGGGGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GERERLSLSPATMKA*LLVYTVSVLLVGKR Trigger: CCTCTTCCCCACCAGAAGGACAGATACCGTGTACACAAGTAACCAGGCTTTCATAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR TCA 90 bp | ACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACCAGCAACTATaGAAGCCTGGTTACTTGTGTACACGGTATCTGTCCTTCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: TTQVREKDSPSHQQL*KPGYLCTRYLSFWW Trigger: CCACCAGAAGGACAGATACCGTGTACACAAGTAACCAGGCTTTCATAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR TCA 90 bp | ATTCCTGGTCCGAGCTGTCCTTTCTTCTTCCTTCTACCACACAGGTaGGAGAGAAAGACTCTCCCTCTCACCAGCAACTATGAAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: IPGPSCPFFFLLPHR*ERKTLPLTSNYESL Trigger: CAGGCTTTCATAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAGAAGAAAGGACAGCTCGGACCAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR TCA 90 bp | CAGGGTGCATCTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTaGCAGAACAATGAAAAGCCGCTCGACAATCTTGAAGCACACACC | + |
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Preference number: 1 (lower is better) Translates to: QGASKVCMPTIGLYL*QNNEKPLDNLEAHT Trigger: GGTGTGTGCTTCAAGATTGTCGAGCGGCTTTTCATTGTTCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAGATGCACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCCTAACCAGCCTCTCTAAGCAATACTGCACTTaGGCTGGTGACTGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LVGSARPGVPPTFLTSLSKQYCT*AGDCSV Trigger: GACAGAGCAGTCACCAGCTCAAGTGCAGTATTGCTT...AGAGAGGCTGGTTAGGAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGCGACAGGCTTTCCAGCCACAGTCACTATCCTCATCAGCATCCCACAACGCTCTGTCCCAAGGGTaGCCTGCAGGCAGGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: AKRQAFQPQSLSSSASHNALSQG*PAGRAA Trigger: AGCAGCCCTGCCTGCAGGCCACCCTTGGGACAGAGC...GTTGTGGGATGCTGATGAGGATAGTGACTGTGGCTGGAAAGCCTGTCGCTTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CAA 90 bp | TCTGTCCCAAGGGTGGCCTGCAGGCAGGGCTGCTCATCTTCCTCCTaGGTAGTCCCTTTAAAAACTGGAGATGCTGGCCTGCCACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SVPRVACRQGCSSSS*VVPLKTGDAGLPLS Trigger: GCTGAGTGGCAGGCCAGCATCTCCAGTTTTTAAAGGGACTACCAAGGAGGAAGATGAGCAGCCCTGCCTGCAGGCCACCCTTGGGACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGCGGGGAGGTCTCACTTCCCTCATATCCCACTGACTTCTGAAGAGATCCCAGCCGGTGCAGAAGGCTaGCCTTTCCAGCATCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: TAGRSHFPHIPLTSEEIPAGAEG*PFQHPA Trigger: AGCGGGATGCTGGAAAGGCCAGCCTTCTGCACCGGC...TGGGATCTCTTCAGAAGTCAGTGGGATATGAGGGAAGTGAGACCTCCCCGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCTTCCAGTGTGAGATGTaGTCAGCACTCCAGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QESHSLVGSARPGVPPTFFQCEM*SALQGE Trigger: TTCACCCTGGAGTGCTGACCACATCTCACACTGGAA...GAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCCTAACCAGCCTCTCTAGGGGAATTAAGAGATaGAAGGGAGAGACAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVGSARPGVPPTFLTSLSRGIKR*KGETGE Trigger: TTCCCCTGTCTCTCCCTTCCATCTCTTAATTCCCCT...AGAGAGGCTGGTTAGGAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTCAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCCTTCTACCACACAGGTaGGAGAGAAAGACTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VCQESHSLVGSARPGVPPLLPHR*ERKTLP Trigger: AGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAG...GGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTGACAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCCCACTGGATTCATTGTaGTTCAGAGTGTCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: QESHSLVGSARPGVPPTFPLDSL*FRVSAP Trigger: AGGAGCAGACACTCTGAAGCACAATGAATCCAGTGG...GAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGCGACAGGCTTTCCAGCCACAGTCACTATCCTCATCAGCATCCCACAACACTTCCTCACCCTCGTaGTCACCGCCGGTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AKRQAFQPQSLSSSASHNTSSPS*SPPVQK Trigger: CTTCTGCACCGGCGGTGAGCACGAGGGTGAGGAAGT...GTTGTGGGATGCTGATGAGGATAGTGACTGTGGCTGGAAAGCCTGTCGCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCCTGGGCAGAGCCAGGTaGTCATGGGTATTTGATTTA | + |
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Preference number: 2 (lower is better) Translates to: QESHSLVGSARPGVPPTFLGRAR*SWVFDL Trigger: TAAATCAAATACCCATGAGCACCTGGCTCTGCCCAG...GAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCAGGGGAATTAAGAGATaGAAGGGAGAGACAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QESHSLVGSARPGVPPTFRGIKR*KGETGE Trigger: TTCCCCTGTCTCTCCCTTCCATCTCTTAATTCCCCT...GAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTCAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCCTCAGGGAAGATTCCTaGTCCGAGCTGTCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VCQESHSLVGSARPGVPPLREDS*SELSFL Trigger: AAGAAAGGACAGCTCGGACCAGGAATCTTCCCTGAG...GGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTGACAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGAAGCCCAAGAAATGACTCCTTCATGGTGCCATTTAAGGAAGGGGGCAAGCGTCCCAAGGGTGGCCTaGAGGCAGGGCTGCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: SEAQEMTPSWCHLRKGASVPRVA*RQGCSS Trigger: AGATGAGCAGCCCTGCCTGCAGGCCACCCTTGGGAC...GCTTGCCCCCTTCCTTAAATGGCACCATGAAGGAGTCATTTCTTGGGCTTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCCATCTAAGGTCTGCATaGCCACAATCGGTTTATATC | + |
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Preference number: 2 (lower is better) Translates to: QESHSLVGSARPGVPPTFHLRSA*PQSVYI Trigger: GATATAAACCGATTGTGGGCATGCAGACCTTAGATG...GAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGCAGAGCCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTGGTCCGTCCCAAGGGTGGCCTaGAGGCAGGGCTGCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: LWAEPGAHGYLIYKRDWSVPRVA*RQGCSS Trigger: AGATGAGCAGCCCTGCCTGCAGGCCACCCTTGGGAC...GGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCCTAACCAGCCTCTCTATTTGTGTCAAATTCTaGCAGTGTCCAAGGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LVGSARPGVPPTFLTSLSICVKF*QCPRSS Trigger: AGAACTCCTTGGACACTGGCAGAATTTGACACAAAT...AGAGAGGCTGGTTAGGAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTCTTCTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACGTCTCGTGGCCATCCTaGGGCCACCGAGGTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SFLLPSTTQVREKDSPSHVSWPS*GHRGLN Trigger: ATTCAGACCTCGGTGGCCTCAGGATGGCCACGAGAC...GTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAGAAGAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGCAGGCAGGGCTGCTCATCTTCCTCCTTGGTAGTCCCTTTAAAAACTGGATCCTCTTTCCAGTGTaGGATGTGGTCAGCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: GLQAGLLIFLLGSPFKNWILFPV*DVVSTP Trigger: TGGAGTGCTGACCACATCTCACACTGGAAAGAGGAT...CCAGTTTTTAAAGGGACTACCAAGGAGGAAGATGAGCAGCCCTGCCTGCAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR TCA 90 bp | CTCATCTTCCTCCTTGGTAGTCCCTTTAAAAACTGGAGATGCTGGCCTGCCACTCCTCTAGACAAGAGGTaGGGAGGAGGGGAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LIFLLGSPFKNWRCWPATPLDKR*GGGERG Trigger: TCCTCTCTCCCCTCCTCCTCACCTCTTGTCTAGAGG...AGTGGCAGGCCAGCATCTCCAGTTTTTAAAGGGACTACCAAGGAGGAAGATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGCAGGCAGGGCTGCTCATCTTCCTCCTTGGTAGTCCCTTTAAAAACTGGAGAGCTTATTTATCTTaGCAGTCCTGGGAGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GLQAGLLIFLLGSPFKNWRAYLS*QSWEEV Trigger: GACCTCCTCCCAGGACTGGCAAGATAAATAAGCTCT...CCAGTTTTTAAAGGGACTACCAAGGAGGAAGATGAGCAGCCCTGCCTGCAGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTGGTCCCTTAGTGTCTCGTGGCCATCCTaGGGCCACCGAGGTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: AEPGAHGYLIYKRDWSLSVSWPS*GHRGLN Trigger: ATTCAGACCTCGGTGGCCTCAGGATGGCCACGAGAC...ACTAAGGGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGCGACAGGCTTTCCAGCCACAGTCACTATCCTCATCAGCATCCCACAACGGTGCATCTAAGGTCTaGATGCCCACAATCGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: AKRQAFQPQSLSSSASHNGASKV*MPTIGL Trigger: TAAACCGATTGTGGGCATGCAGACCTTAGATGCACC...GTTGTGGGATGCTGATGAGGATAGTGACTGTGGCTGGAAAGCCTGTCGCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGCAGAGCCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTGGTCCGGCTGCTGCCACTTCTaGCCTTGGCAGAATGAATGC | + |
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Preference number: 2 (lower is better) Translates to: LWAEPGAHGYLIYKRDWSGCCHF*PWQNEC Trigger: GCATTCATTCTGCCAAGGGCAGAAGTGGCAGCAGCC...GGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGCCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTCTTCTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACGGCTGCTGCCACTTCTaGCCTTGGCAGAATGAATGC | + |
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Preference number: 2 (lower is better) Translates to: SFLLPSTTQVREKDSPSHGCCHF*PWQNEC Trigger: GCATTCATTCTGCCAAGGGCAGAAGTGGCAGCAGCC...GTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAGAAGAAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGCGGGGAGGTCTCACTTCCCTCATATCCCACTGACTTCTGAAGAGATCCCACTGAAGGAGTCCCACTaGATTCATTGTGCTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TAGRSHFPHIPLTSEEIPLKESH*IHCASE Trigger: CTCTGAAGCACAATGAATCCAGTGGGACTCCTTCAG...TGGGATCTCTTCAGAAGTCAGTGGGATATGAGGGAAGTGAGACCTCCCCGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTGACAGAACAATGAAAAGCGCCGGTGCAGAAGGCTaGCCTTTCCAGCATCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: LRSACPQSVYISDRTMKSAGAEG*PFQHPA Trigger: AGCGGGATGCTGGAAAGGCCAGCCTTCTGCACCGGC...GCTTTTCATTGTTCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | GACAGGGTGCATCTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTGACAGATTATCTTGCCAGTCCTaGGAGGAGGTCAGCGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: DRVHLRSACPQSVYISDRLSCQS*EEVSGA Trigger: AGCTCCGCTGACCTCCTCCCAGGACTGGCAAGATAA...TCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAGATGCACCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTCAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCATTTATAAAAGAGACTaGTCCCTTAGTGAAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: VCQESHSLVGSARPGVPPIYKRD*SLSEAQ Trigger: TTGGGCTTCACTAAGGGACCAGTCTCTTTTATAAAT...GGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTGACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGGCAGAGCCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTGGTCCTATCCCACTGACTTCTaGAGAGATCCCACCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LWAEPGAHGYLIYKRDWSYPTDF*RDPTLH Trigger: GTGGAGGGTGGGATCTCTTCAGAAGTCAGTGGGATA...GGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAACCTCAGGGAAGATTCCTGGTCCGAGCTGTCCTTTCTTCTTCCTTCTCCACTGGATTCATTGTaGTTCAGAGTGTCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PGNLREDSWSELSFLLPSPLDSL*FRVSAP Trigger: AGGAGCAGACACTCTGAAGCACAATGAATCCAGTGG...AGAAGGAAGAAGAAAGGACAGCTCGGACCAGGAATCTTCCCTGAGGTTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACCAGCAACTACTTAAAGCTGTACACTaGATCCAGGTTGGGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LPSTTQVREKDSPSHQQLLKAVH*IQVGAV Trigger: CACAGCCCCAACCTGGATGCAGTGTACAGCTTTAAG...TAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGAAGCCCAAGAAATGACTCCTTCATGGTGCCATTTAAGGAAGGGGGCAAGCCTTAAAGCTGTACACTaGATCCAGGTTGGGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SEAQEMTPSWCHLRKGASLKAVH*IQVGAV Trigger: CACAGCCCCAACCTGGATGCAGTGTACAGCTTTAAG...GCTTGCCCCCTTCCTTAAATGGCACCATGAAGGAGTCATTTCTTGGGCTTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGCGGGGAGGTCTCACTTCCCTCATATCCCACTGACTTCTGAAGAGATCCCAAGCCAAGACCACAGCTaGTATTATGGGAAAATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TAGRSHFPHIPLTSEEIPSQDHS*YYGKMS Trigger: GGACATTTTCCCATAATACCAGCTGTGGTCTTGGCT...TGGGATCTCTTCAGAAGTCAGTGGGATATGAGGGAAGTGAGACCTCCCCGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGTCAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCTCAGAATCTGATAATTaGATGGTTACAGGAGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VCQESHSLVGSARPGVPPSESDN*MVTGAN Trigger: ATTTGCTCCTGTAACCATCCAATTATCAGATTCTGA...GGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTGACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAGCCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTGGTCCCTTAGTGAGTTCCTTGTGGCCTaGAGGAGTCCCACTGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: AEPGAHGYLIYKRDWSLSEFLVA*RSPTGF Trigger: GAATCCAGTGGGACTCCTTCAGGCCACAAGGAACTC...ACTAAGGGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR TCA 90 bp | CCACGGTCAAGTTTTATTAAATCAAACAATTACACACGGGCTCACGAGGAAGTTGTCAGCACTCCAGGGTaGAGCACTTCCTCACCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: PRSSFIKSNNYTRAHEEVVSTPG*STSSPS Trigger: CGAGGGTGAGGAAGTGCTTCACCCTGGAGTGCTGAC...AACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAATAAAACTTGACCGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTTCTTCTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACCTTCTACCACACAGGTaGGAGAGAAAGACTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SFLLPSTTQVREKDSPSHLLPHR*ERKTLP Trigger: AGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAG...GTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAGAAGAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTTTTATTAAATCAAACAATTACACACGGGCTCACGAGGAAGTTGGCGACAACTTCCTCACCCTCGTaGTCACCGCCGGTGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QVLLNQTITHGLTRKLATTSSPS*SPPVQK Trigger: CTTCTGCACCGGCGGTGAGCACGAGGGTGAGGAAGT...TGTCGCCAACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAATAAAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCGGGGAGGTCTCACTTCCCTCATATCCCACTGACTTCTGAAGAGATCCCACATCTAAGGTCTGCATaGCCACAATCGGTTTATATC | + |
|
Preference number: 2 (lower is better) Translates to: TAGRSHFPHIPLTSEEIPHLRSA*PQSVYI Trigger: GATATAAACCGATTGTGGGCATGCAGACCTTAGATG...TGGGATCTCTTCAGAAGTCAGTGGGATATGAGGGAAGTGAGACCTCCCCGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACCAGCAACTAATGACTCCTTCATGGTaGCATTTAAGGAAGGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LPSTTQVREKDSPSHQQLMTPSW*HLRKGA Trigger: TGCCCCCTTCCTTAAATGGCACCATGAAGGAGTCAT...TAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACCAGCAACTATATCTGTCCTTCTGGTaGGGAAGAGGAGACATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPSTTQVREKDSPSHQQLYLSFW*GRGDIS Trigger: AGAGATGTCTCCTCTTCCCCACCAGAAGGACAGATA...TAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR CAA 90 bp | GGGAAGAGGAGACATCTCTGGGCAGAGCCAGGTGCTCATGGGTATTaGATTTATAAAAGAGACTGGTCCCTTAGTGAAGCCCAAGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: GKRRHLWAEPGAHGY*IYKRDWSLSEAQEM Trigger: CATTTCTTGGGCTTCACTAAGGGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGCCCAGAGATGTCTCCTCTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | ACGAGGAAGTTGGCGACACCAATAGTTTCCCCCACTGCACCTTTATTGTTTGTTTTTAAAAACTGGAGATaGTGGCCTGCCACTCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TRKLATPIVSPTAPLLFVFKNWR*WPATQP Trigger: GGGCTGAGTGGCAGGCCAGCATCTCCAGTTTTTAAA...AACAAACAATAAAGGTGCAGTGGGGGAAACTATTGGTGTCGCCAACTTCCTCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | CCACGGTCAAGTTTTATTAAATCAAACAATTACACACGGGCTCACGAGGAAGTTGCCTGCAGGCAGGGCTaGTCATCTTCCTCCTTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PRSSFIKSNNYTRAHEEVACRQG*SSSSLV Trigger: TACCAAGGAGGAAGATGAGCAGCCCTGCCTGCAGGC...AACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAATAAAACTTGACCGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGCATCTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTGACAGAACAATGTTCCAGTGTGAGATGTaGTCAGCACTCCAGGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VHLRSACPQSVYISDRTMFQCEM*SALQGE Trigger: TTCACCCTGGAGTGCTGACCACATCTCACACTGGAA...CATTGTTCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAGATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGCATCTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTGACAGAACAATGAGTTCGAAGGTGCATTaGTGGAGCATTGTGTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VHLRSACPQSVYISDRTMSSKVH*WSIVWS Trigger: AGACCACACAATGCTCCATCAATGCACCTTCGAACT...CATTGTTCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAGATGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAGCCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTGGTCCCTTAGTAGTTCGAAGGTGCATTaGTGGAGCATTGTGTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: AEPGAHGYLIYKRDWSLSSSKVH*WSIVWS Trigger: AGACCACACAATGCTCCATCAATGCACCTTCGAACT...ACTAAGGGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR TCA 90 bp | AATCAGAATCTGATAATTGGATGGTTACAGGAGCAAATAAGCAATACTGCACTTGTCAGCACTCCAGGGTaGAGCACTTCCTCACCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: NQNLIIGWLQEQISNTALVSTPG*STSSPS Trigger: CGAGGGTGAGGAAGTGCTTCACCCTGGAGTGCTGAC...AAGTGCAGTATTGCTTATTTGCTCCTGTAACCATCCAATTATCAGATTCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTTGGCGACACCAATAGTTTCCCCCACTGCACCTTTATTGTTTGTTTAGTCGGTGCATCTAAGGTCTaGATGCCCACAATCGGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: EVGDTNSFPHCTFIVCLVGASKV*MPTIGL Trigger: TAAACCGATTGTGGGCATGCAGACCTTAGATGCACC...GACTAAACAAACAATAAAGGTGCAGTGGGGGAAACTATTGGTGTCGCCAACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGAAACCTCAGGGAAGATTCCTGGTCCGAGCTGTCCTTTCTTCTTCCTTCTCTCAGCCCTTGTTCATaGATAATTCTCAATAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PGNLREDSWSELSFLLPSLSPCS*IILNKD Trigger: GTCTTTATTGAGAATTATGCATGAACAAGGGCTGAG...AGAAGGAAGAAGAAAGGACAGCTCGGACCAGGAATCTTCCCTGAGGTTTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCGGGGAGGTCTCACTTCCCTCATATCCCACTGACTTCTGAAGAGATCCCAAATCTGATAATTGGATaGTTACAGGAGCAAATAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TAGRSHFPHIPLTSEEIPNLIIG*LQEQIS Trigger: GCTTATTTGCTCCTGTAACCATCCAATTATCAGATT...TGGGATCTCTTCAGAAGTCAGTGGGATATGAGGGAAGTGAGACCTCCCCGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGCTCATCTTCCTCCTTGGTAGTCCCTTTAAAAACTGGAGATGCTGGCCTGCCCATATCAAACAGCTaGAAACATTTGATGAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: GCSSSSLVVPLKTGDAGLPISNS*KHLMNA Trigger: TGCATTCATCAAATGTTTCCAGCTGTTTGATATGGG...CAGGCCAGCATCTCCAGTTTTTAAAGGGACTACCAAGGAGGAAGATGAGCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180458.9 |
||
| 3UTR-3UTR TCA 90 bp | CCACGGTCAAGTTTTATTAAATCAAACAATTACACACGGGCTCACGAGGAAGTTATCCTCTTTCCAGTGTaGGATGTGGTCAGCACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PRSSFIKSNNYTRAHEEVILFPV*DVVSTP Trigger: TGGAGTGCTGACCACATCTCACACTGGAAAGAGGAT...AACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAATAAAACTTGACCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTTTTATTAAATCAAACAATTACACACGGGCTCACGAGGAAGTTGGCGACAAAGCAATACTGCACTTaGGCTGGTGACTGCTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QVLLNQTITHGLTRKLATKQYCT*AGDCSV Trigger: GACAGAGCAGTCACCAGCTCAAGTGCAGTATTGCTT...TGTCGCCAACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAATAAAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTGAAGCCCAAGAAATGACTCCTTCATGGTGCCATTTAAGGAAGGGGGCAAGCCTCAGCCCTTGTTCATaGATAATTCTCAATAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SEAQEMTPSWCHLRKGASLSPCS*IILNKD Trigger: GTCTTTATTGAGAATTATGCATGAACAAGGGCTGAG...GCTTGCCCCCTTCCTTAAATGGCACCATGAAGGAGTCATTTCTTGGGCTTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | AATCAGAATCTGATAATTGGATGGTTACAGGAGCAAATAAGCAATACTGCACTTGCCTGCAGGCAGGGCTaGTCATCTTCCTCCTTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NQNLIIGWLQEQISNTALACRQG*SSSSLV Trigger: TACCAAGGAGGAAGATGAGCAGCCCTGCCTGCAGGC...AAGTGCAGTATTGCTTATTTGCTCCTGTAACCATCCAATTATCAGATTCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTGACAGAACAATGAAAAGCAGCCAAGACCACAGCTaGTATTATGGGAAAATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LRSACPQSVYISDRTMKSSQDHS*YYGKMS Trigger: GGACATTTTCCCATAATACCAGCTGTGGTCTTGGCT...GCTTTTCATTGTTCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACCAGCAACTAAGAGCTTTGTGTGAGTaGAAAAACAGCTTTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: LPSTTQVREKDSPSHQQLRALCE*KNSFKM Trigger: CATTTTAAAGCTGTTTTTCCACTCACACAAAGCTCT...TAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTTCTTCTTCCTTCTACCACACAGGTGAGAGAGAAAGACTCTCCCTCTCACTCAGAATCTGATAATTaGATGGTTACAGGAGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SFLLPSTTQVREKDSPSHSESDN*MVTGAN Trigger: ATTTGCTCCTGTAACCATCCAATTATCAGATTCTGA...GTGAGAGGGAGAGTCTTTCTCTCTCACCTGTGTGGTAGAAGGAAGAAGAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGGCAGAGCCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTGGTCCAGAGCTTTGTGTGAGTaGAAAAACAGCTTTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: LWAEPGAHGYLIYKRDWSRALCE*KNSFKM Trigger: CATTTTAAAGCTGTTTTTCCACTCACACAAAGCTCT...GGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGCCCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | ACGAGGAAGTTGGCGACACCAATAGTTTCCCCCACTGCACCTTTATTGTTTGTTTTGTTTAGTCCACTGTaGAGAATTACAGTTTGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: TRKLATPIVSPTAPLLFVLFSPL*RITVCQ Trigger: TTGACAAACTGTAATTCTGCACAGTGGACTAAACAA...AACAAACAATAAAGGTGCAGTGGGGGAAACTATTGGTGTCGCCAACTTCCTCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | CCACGGTCAAGTTTTATTAAATCAAACAATTACACACGGGCTCACGAGGAAGTTGAAACATTTGATGAATaGAATGCCTGTCAACGAACC | + |
|
Preference number: 2 (lower is better) Translates to: PRSSFIKSNNYTRAHEEVETFDE*NACQRT Trigger: GGTTCGTTGACAGGCATTGCATTCATCAAATGTTTC...AACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAATAAAACTTGACCGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180458.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTTGGCGACACCAATAGTTTCCCCCACTGCACCTTTATTGTTTGTTTAGTCGCTTCTCCAAATATTTaGTTCATGCTAGAGCTTATT | + |
|
Preference number: 2 (lower is better) Translates to: EVGDTNSFPHCTFIVCLVASPNI*FMLELI Trigger: AATAAGCTCTAGCATGAACCAAATATTTGGAGAAGC...GACTAAACAAACAATAAAGGTGCAGTGGGGGAAACTATTGGTGTCGCCAACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180503.3 |
||
| 3UTR-3UTR GCA 90 bp | CCACGGTCAAGTTTTATTAAATCAAACAATTACACACGGGCTCACGAGGAAGTTTTGTTTAGTCCACTGTaGAGAATTACAGTTTGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PRSSFIKSNNYTRAHEEVLFSPL*RITVCQ Trigger: TTGACAAACTGTAATTCTGCACAGTGGACTAAACAA...AACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAATAAAACTTGACCGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR GCA 72 bp | GGTGAAGCACTTCCTCACCCTCGTGCTCACCGCCGGTaGAGAAGGCTGGCCTTTCCAGCATCCCGCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GEALPHPRAHRR*RRLAFPASRWV Trigger: GACCCAGCGGGATGCTGGAAAGGCCAGCCTTCTGCACCGGCGGTGAGCACGAGGGTGAGGAAGTGCTTCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR CCA 72 bp | CGCCGGTGCAGAAGGCTGGCCTTTCCAGCATCCCGCTaGGTCCCCTGTGGGAGTTCCTTGTGGCCTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRCRRLAFPASR*VPCGSSLWPEG Trigger: TCCTTCAGGCCACAAGGAACTCCCACAGGGGACCCAGCGGGATGCTGGAAAGGCCAGCCTTCTGCACCGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR GCA 72 bp | CCCCAGGCAGCTCACCAAGGAAGGGATGACGGCTGGTaGACTGAACATCGAGCTCGCCCCGTTTCCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PQAAHQGRDDGW*TEHRARPVSIS Trigger: AGAGATGGAAACGGGGCGAGCTCGATGTTCAGTGCACCAGCCGTCATCCCTTCCTTGGTGAGCTGCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAATCACACAGCCTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCAGCCGCTCGACAATCTaGAAGCACACACCAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QESHSLVGSARPGVPPTFSRSTI*KHTPAK Trigger: CTTGGCTGGTGTGTGCTTCAAGATTGTCGAGCGGCT...GAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAGGCTGTGTGATTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR CCA 72 bp | CGAACCGCACCTAGAGCTTATTTATCTTGCCAGTCCTaGGAGGAGGTCAGCGGAGCTGCGACTACCCCACGC | + |
|
Preference number: 3 (lower is better) Translates to: RTAPRAYLSCQS*EEVSGAATTPR Trigger: GCGTGGGGTAGTCGCAGCTCCGCTGACCTCCTCCCAGGACTGGCAAGATAAATAAGCTCTAGGTGCGGTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180458.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTAGGTAGTGCTCGCCCCGGGGTGCCTCCCACCTTCCTAACCAGCCTCTCTCCTGCCACTCAGCCCTaGTTCATGCATAATTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVGSARPGVPPTFLTSLSPATQP*FMHNSQ Trigger: TTGAGAATTATGCATGAACAAGGGCTGAGTGGCAGG...AGAGAGGCTGGTTAGGAAGGTGGGAGGCACCCCGGGGCGAGCACTACCTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR GCA 72 bp | GCCTGTCAACGAACCGCACCTAGAGCTTATTTATCTTaGCAGTCCTGGGAGGAGGTCAGCGGAGCTGCGACT | + |
|
Preference number: 3 (lower is better) Translates to: ACQRTAPRAYLS*QSWEEVSGAAT Trigger: AGTCGCAGCTCCGCTGACCTCCTCCCAGGACTGGCAAGATAAATAAGCTCTAGGTGCGGTTCGTTGACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180458.9 |
||
| 3UTR CCA 72 bp | CGACTACCCCACGCATCCTCTTTCCAGTGTGAGATGTaGTCAGCACTCCAGGGTGAAGCACTTCCTCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLPHASSFQCEM*SALQGEALPHP Trigger: AGGGTGAGGAAGTGCTTCACCCTGGAGTGCTGACCACATCTCACACTGGAAAGAGGATGCGTGGGGTAGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR GCA 72 bp | GACTGCTCTGTCCCAAGGGTGGCCTGCAGGCAGGGCTaGTCATCTTCCTCCTTGGTAGTCCCTTTAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: DCSVPRVACRQG*SSSSLVVPLKT Trigger: AGTTTTTAAAGGGACTACCAAGGAGGAAGATGAGCAGCCCTGCCTGCAGGCCACCCTTGGGACAGAGCAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR CCA 72 bp | TTGGTTCATGCTAGAGCTTATTTATCTTGCCAGTCCTaGGAGGAGGTCAGCGGAGCTGCGACTACCCCACGC | + |
|
Preference number: 3 (lower is better) Translates to: LVHARAYLSCQS*EEVSGAATTPR Trigger: GCGTGGGGTAGTCGCAGCTCCGCTGACCTCCTCCCAGGACTGGCAAGATAAATAAGCTCTAGCATGAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180503.3 |
||
| 3UTR CCA 72 bp | CCTGGTTACTTGTGTACACGGTATCTGTCCTTCTGGTaGGGAAGAGGAGACATCTCTGGGCAGAGCCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGYLCTRYLSFW*GRGDISGQSQV Trigger: CACCTGGCTCTGCCCAGAGATGTCTCCTCTTCCCCACCAGAAGGACAGATACCGTGTACACAAGTAACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGCAGGCAGGGCTGCTCATCTTCCTCCTTGGTAGTCCCTTTAAAAACTGGGTCCCACTGGATTCATaGTGCTTCAGAGTGTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLQAGLLIFLLGSPFKNWVPLDS*CFRVSA Trigger: AGCAGACACTCTGAAGCACAATGAATCCAGTGGGAC...CCAGTTTTTAAAGGGACTACCAAGGAGGAAGATGAGCAGCCCTGCCTGCAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR TCA 72 bp | TGGATGGTTACAGGAGCAAATAAGCAATACTGCACTTaGGCTGGTGACTGCTCTGTCCCAAGGGTGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: WMVTGANKQYCT*AGDCSVPRVAC Trigger: GCAGGCCACCCTTGGGACAGAGCAGTCACCAGCTCAAGTGCAGTATTGCTTATTTGCTCCTGTAACCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
||
| 3UTR GCA 72 bp | CGGGTCCATCAGGTGACCCGTCAGAAAGTTCGAAGGTaGATTGATGGAGCATTGTGTGGTCTTCAAACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RVHQVTRQKVRR*IDGALCGLQTC Trigger: GCAGGTTTGAAGACCACACAATGCTCCATCAATGCACCTTCGAACTTTCTGACGGGTCACCTGATGGACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR GCA 72 bp | AGAATGAATGCGGACCCTCTCCTTAAAGCTGTACACTaGATCCAGGTTGGGGCTGTGTTACGGAGCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RMNADPLLKAVH*IQVGAVLRSQR Trigger: TCTCTGGCTCCGTAACACAGCCCCAACCTGGATGCAGTGTACAGCTTTAAGGAGAGGGTCCGCATTCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGCGACAGGCTTTCCAGCCACAGTCACTATCCTCATCAGCATCCCACAACGTCCCACTGGATTCATaGTGCTTCAGAGTGTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: AKRQAFQPQSLSSSASHNVPLDS*CFRVSA Trigger: AGCAGACACTCTGAAGCACAATGAATCCAGTGGGAC...GTTGTGGGATGCTGATGAGGATAGTGACTGTGGCTGGAAAGCCTGTCGCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR TCA 72 bp | CCATCAGGTGACCCGTCAGAAAGTTCGAAGGTGCATTaGTGGAGCATTGTGTGGTCTTCAAACCTGCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: PSGDPSESSKVH*WSIVWSSNLLV Trigger: GACCAGCAGGTTTGAAGACCACACAATGCTCCATCAATGCACCTTCGAACTTTCTGACGGGTCACCTGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CCA 72 bp | GTATCTGTCCTTCTGGTGGGGAAGAGGAGACATCTCTaGGCAGAGCCAGGTGCTCATGGGTATTTGATTTAT | + |
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Preference number: 3 (lower is better) Translates to: VSVLLVGKRRHL*AEPGAHGYLIY Trigger: ATAAATCAAATACCCATGAGCACCTGGCTCTGCCCAGAGATGTCTCCTCTTCCCCACCAGAAGGACAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CAA 90 bp | AGTGAAGCCCAAGAAATGACTCCTTCATGGTGCCATTTAAGGAAGGGGGCAAGCCCTGCCACTCAGCCCTaGTTCATGCATAATTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: SEAQEMTPSWCHLRKGASPATQP*FMHNSQ Trigger: TTGAGAATTATGCATGAACAAGGGCTGAGTGGCAGG...GCTTGCCCCCTTCCTTAAATGGCACCATGAAGGAGTCATTTCTTGGGCTTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR TCA 72 bp | GTGAGAGAGAAAGACTCTCCCTCTCACCAGCAACTATaGAAGCCTGGTTACTTGTGTACACGGTATCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: VREKDSPSHQQL*KPGYLCTRYLS Trigger: GGACAGATACCGTGTACACAAGTAACCAGGCTTTCATAGTTGCTGGTGAGAGGGAGAGTCTTTCTCTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR GCA 72 bp | TCCAAATATTTGGTTCATGCTAGAGCTTATTTATCTTaGCAGTCCTGGGAGGAGGTCAGCGGAGCTGCGACT | + |
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Preference number: 3 (lower is better) Translates to: SKYLVHARAYLS*QSWEEVSGAAT Trigger: AGTCGCAGCTCCGCTGACCTCCTCCCAGGACTGGCAAGATAAATAAGCTCTAGCATGAACCAAATATTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180503.3 |
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| 3UTR GCA 72 bp | ATCTTCCTCCTTGGTAGTCCCTTTAAAAACTGGAGATaGTGGCCTGCCACTCAGCCCTTGTTCATGCATAAT | + |
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Preference number: 3 (lower is better) Translates to: IFLLGSPFKNWR*WPATQPLFMHN Trigger: ATTATGCATGAACAAGGGCTGAGTGGCAGGCCAGCATCTCCAGTTTTTAAAGGGACTACCAAGGAGGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CCA 72 bp | GACAATCTTGAAGCACACACCAGCCAAGACCACAGCTaGTATTATGGGAAAATGTCCTCTAGACAAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: DNLEAHTSQDHS*YYGKMSSRQEV Trigger: CACCTCTTGTCTAGAGGACATTTTCCCATAATACCAGCTGTGGTCTTGGCTGGTGTGTGCTTCAAGATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR GCA 72 bp | CCAGCCTCTCTACTGTCTTTTATTTGTGTCAAATTCTaGCAGTGTCCAAGGAGTTCTAAGGTTGTTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PASLLSFICVKF*QCPRSSKVVSC Trigger: ACAGGAAACAACCTTAGAACTCCTTGGACACTGGCAGAATTTGACACAAATAAAAGACAGTAGAGAGGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CCA 72 bp | CCAGGTGCTCATGGGTATTTGATTTATAAAAGAGACTaGTCCCTTAGTGAAGCCCAAGAAATGACTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: PGAHGYLIYKRD*SLSEAQEMTPS Trigger: TGAAGGAGTCATTTCTTGGGCTTCACTAAGGGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR GCA 72 bp | ATTCTCAATAAAGACAGGGTGCATCTAAGGTCTGCATaGCCACAATCGGTTTATATCTCTGACAGAACAATG | + |
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Preference number: 3 (lower is better) Translates to: ILNKDRVHLRSA*PQSVYISDRTM Trigger: CATTGTTCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAGATGCACCCTGTCTTTATTGAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR-3UTR CAA 90 bp | AATCAGAATCTGATAATTGGATGGTTACAGGAGCAAATAAGCAATACTGCACTTAACAGCTGGAAACATTaGATGAATGCAATGCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: NQNLIIGWLQEQISNTALNSWKH*MNAMPV Trigger: GACAGGCATTGCATTCATCAAATGTTTCCAGCTGTT...AAGTGCAGTATTGCTTATTTGCTCCTGTAACCATCCAATTATCAGATTCTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180458.9 |
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| 3UTR CAA 72 bp | TTTCCAGCATCCCGCTGGGTCCCCTGTGGGAGTTCCTaGTGGCCTGAAGGAGTCCCACTGGATTCATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: FPASRWVPCGSS*WPEGVPLDSLC Trigger: GCACAATGAATCCAGTGGGACTCCTTCAGGCCACAAGGAACTCCCACAGGGGACCCAGCGGGATGCTGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| CDS-3UTR TCA 90 bp | ACAGCGGGGAGGTCTCACTTCCCTCATATCCCACTGACTTCTGAAGAGATCCCATCAGGATGGTCCCGATaGTGCCCAGCATGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: TAGRSHFPHIPLTSEEIPSGWSR*CPAWPT Trigger: TGTTGGCCATGCTGGGCATCATCGGGACCATCCTGA...TGGGATCTCTTCAGAAGTCAGTGGGATATGAGGGAAGTGAGACCTCCCCGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CAA 72 bp | AGTTCCTTGTGGCCTGAAGGAGTCCCACTGGATTCATaGTGCTTCAGAGTGTCTGCTCCTCACAGAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: SSLWPEGVPLDS*CFRVSAPHRRT Trigger: CGTCCTTCTGTGAGGAGCAGACACTCTGAAGCACAATGAATCCAGTGGGACTCCTTCAGGCCACAAGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| CDS-3UTR TCA 90 bp | GAAGTTGGCGACACCAATAGTTTCCCCCACTGCACCTTTATTGTTTGTTTAGTCTCAGGATGGTCCCGATaGTGCCCAGCATGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: EVGDTNSFPHCTFIVCLVSGWSR*CPAWPT Trigger: TGTTGGCCATGCTGGGCATCATCGGGACCATCCTGA...GACTAAACAAACAATAAAGGTGCAGTGGGGGAAACTATTGGTGTCGCCAACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| CDS-3UTR CCA 90 bp | GACAGGGTGCATCTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTGACAGATTGCTCTCTTTCTCTTaGCCTCCCCGGTCTTCATCG | + |
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Preference number: 4 (lower is better) Translates to: DRVHLRSACPQSVYISDRLLSFS*PPRSSS Trigger: CGATGAAGACCGGGGAGGCCAAGAGAAAGAGAGCAA...TCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAGATGCACCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| CDS-3UTR CCA 90 bp | CTAAGGTCTGCATGCCCACAATCGGTTTATATCTCTGACAGAACAATGAAAAGCTTGCTCTCTTTCTCTTaGCCTCCCCGGTCTTCATCG | + |
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Preference number: 4 (lower is better) Translates to: LRSACPQSVYISDRTMKSLLSFS*PPRSSS Trigger: CGATGAAGACCGGGGAGGCCAAGAGAAAGAGAGCAA...GCTTTTCATTGTTCTGTCAGAGATATAAACCGATTGTGGGCATGCAGACCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CAA 72 bp | AGACATCTCTGGGCAGAGCCAGGTGCTCATGGGTATTaGATTTATAAAAGAGACTGGTCCCTTAGTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RHLWAEPGAHGY*IYKRDWSLSEA Trigger: GGCTTCACTAAGGGACCAGTCTCTTTTATAAATCAAATACCCATGAGCACCTGGCTCTGCCCAGAGATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CAA 72 bp | TTAAATCAAACAATTACACACGGGCTCACGAGGAAGTaGGCGACACCAATAGTTTCCCCCACTGCACCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LNQTITHGLTRK*ATPIVSPTAPL Trigger: TAAAGGTGCAGTGGGGGAAACTATTGGTGTCGCCAACTTCCTCGTGAGCCCGTGTGTAATTGTTTGATTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| 3UTR CAA 72 bp | AATAAGTTATCTCCCATATCAAACAGCTGGAAACATTaGATGAATGCAATGCCTGTCAACGAACCGCACCTA | + |
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Preference number: 4 (lower is better) Translates to: NKLSPISNSWKH*MNAMPVNEPHL Trigger: TAGGTGCGGTTCGTTGACAGGCATTGCATTCATCAAATGTTTCCAGCTGTTTGATATGGGAGATAACTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180458.9 |
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| CDS-3UTR CAA 90 bp | GCAAAGCGACAGGCTTTCCAGCCACAGTCACTATCCTCATCAGCATCCCACAACAACACGCTCTCCTCTTaGCTCTCTTTCTCTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: AKRQAFQPQSLSSSASHNNTLSS*LSFSWP Trigger: AGGCCAAGAGAAAGAGAGCAAAGAGGAGAGCGTGTT...GTTGTGGGATGCTGATGAGGATAGTGACTGTGGCTGGAAAGCCTGTCGCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| CDS CAA 72 bp | CCGATGATGCCCAGCATGGCCAACACGCTCTCCTCTTaGCTCTCTTTCTCTTGGCCTCCCCGGTCTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: PMMPSMANTLSS*LSFSWPPRSSS Trigger: CGATGAAGACCGGGGAGGCCAAGAGAAAGAGAGCAAAGAGGAGAGCGTGTTGGCCATGCTGGGCATCATCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| CDS CAA 90 bp | AGGATGGTCCCGATGATGCCCAGCATGGCCAACACGCTCTCCTCTTaGCTCTCTTTCTCTTGGCCTCCCCGGTCTTCATCGTTTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: RMVPMMPSMANTLSS*LSFSWPPRSSSFPL Trigger: GAGTGGAAACGATGAAGACCGGGGAGGCCAAGAGAAAGAGAGCAAAGAGGAGAGCGTGTTGGCCATGCTGGGCATCATCGGGACCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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| CDS CAA 72 bp | CATGGCCAACACGCTCTCCTCTTTGCTCTCTTTCTCTaGGCCTCCCCGGTCTTCATCGTTTCCACTCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: HGQHALLFALFL*ASPVFIVSTRD Trigger: ATCACGAGTGGAAACGATGAAGACCGGGGAGGCCAAGAGAAAGAGAGCAAAGAGGAGAGCGTGTTGGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180458.9 ENSMUST00000180503.3 |
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