Pregenerated sensors for TULP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001521Ensembl transcript IDs: ENSMUST00000001562.9, ENSMUST00000133134.3, ENSMUST00000157005.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATGCAGGGCAGTGTCTCCACTGGTGTGGGCCAGGTTTCGAGGCTaGAGGACAAAGCTGACAGGCAAAGCCTGTGGAGTGTCGGCGAGG | + |
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Preference number: 1 (lower is better) Translates to: ACRAVSPLVWARFRG*RTKLTGKACGVSAR Trigger: CCTCGCCGACACTCCACAGGCTTTGCCTGTCAGCTTTGTCCTCCAGCCTCGAAACCTGGCCCACACCAGTGGAGACACTGCCCTGCATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR TCA 90 bp | TGTCTCCACTGGTGTGGGCCAGGTTTCGAGGCTGGAGGACAAAGCTaGCAGGCAAAGCCTGTGGAGTGTCGGCGAGGTGACCTCCTCACC | + |
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Preference number: 1 (lower is better) Translates to: CLHWCGPGFEAGGQS*QAKPVECRRGDLLT Trigger: GGTGAGGAGGTCACCTCGCCGACACTCCACAGGCTTTGCCTGTCAGCTTTGTCCTCCAGCCTCGAAACCTGGCCCACACCAGTGGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR TCA 90 bp | AAGGCACTTGATGGGACGCCTGCCAGAGGCAGAGACAGTGACATCTaGAGGGACAGGCAAGACACTGGCCTTAGCACAGGTCTCACCTCC | + |
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Preference number: 1 (lower is better) Translates to: KALDGTPARGRDSDI*RDRQDTGLSTGLTS Trigger: GGAGGTGAGACCTGTGCTAAGGCCAGTGTCTTGCCTGTCCCTTCAGATGTCACTGTCTCTGCCTCTGGCAGGCGTCCCATCAAGTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR GCA 90 bp | AAGATGCTCCAGCCTTGGAGGACAGGGACACAGCCAAGGCAGGCCTaGGAACCAGAGTCACAGGCCAAACTAGGCCAATGCCCACTTTGT | + |
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Preference number: 1 (lower is better) Translates to: KMLQPWRTGTQPRQA*EPESQAKLGQCPLC Trigger: ACAAAGTGGGCATTGGCCTAGTTTGGCCTGTGACTCTGGTTCGCAGGCCTGCCTTGGCTGTGTCCCTGTCCTCCAAGGCTGGAGCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR TCA 90 bp | GGACCTGACTGGGGTCAGTGCAAGAGACACTATCAGACCATTGGCTaGGGAAGGCTGCAGGCTCCTGGGCTAAAGGCATCCAAGGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: GPDWGQCKRHYQTIG*GRLQAPGLKASKGK Trigger: TTTTCCCTTGGATGCCTTTAGCCCAGGAGCCTGCAGCCTTCCTCAGCCAATGGTCTGATAGTGTCTCTTGCACTGACCCCAGTCAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 90 bp | TGGTTTGAATATGCTCCGCCAATGAGGTGGCACTGTTGGAAGGTGTaGCCTTGTTGGAGGAAGTATGTCACTGTGGGGGTGGGCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: WFEYAPPMRWHCWKV*PCWRKYVTVGVGFQ Trigger: CTGGAAGCCCACCCCCACAGTGACATACTTCCTCCAACAAGGCCACACCTTCCAACAGTGCCACCTCATTGGCGGAGCATATTCAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR CCA 90 bp | TTCCTTCACCCAGGAAGCAGGGATAGACACAGCGGTGGAAGTGGATaGAAGACAAGGGGGATAGAGCCAGCAGAGGAGAAATTCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FLHPGSRDRHSGGSG*KTRGIEPAEEKFLF Trigger: GAAGAGGAATTTCTCCTCTGCTGGCTCTATCCCCCTTGTCTTCCATCCACTTCCACCGCTGTGTCTATCCCTGCTTCCTGGGTGAAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR GCA 90 bp | AGGGATGCAGGGACCTCCTCCATACAGGAAAAACCACGGAGCAGTTaGCAGTTTGAGAGTGGGGGACCACTGAATGTAGACCCAAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: RDAGTSSIQEKPRSS*QFESGGPLNVDPKF Trigger: AAACTTTGGGTCTACATTCAGTGGTCCCCCACTCTCAAACTGGCAACTGCTCCGTGGTTTTTCCTGTATGGAGGAGGTCCCTGCATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 90 bp | TCACCACACAGAGTCTGTTGTGCGATCAGGAGACACCAGTGTGCCTaGGTGTCTACTTCCCTGTGCTTTAAGCCATCTCTCACACATGAG | + |
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Preference number: 1 (lower is better) Translates to: SPHRVCCAIRRHQCA*VSTSLCFKPSLTHE Trigger: CTCATGTGTGAGAGATGGCTTAAAGCACAGGGAAGTAGACACCCAGGCACACTGGTGTCTCCTGATCGCACAACAGACTCTGTGTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 90 bp | AGCCAGCCCCAATTAAATGTTGTTCTTTCTAAGAGCTGCCTTGGTTaGTCATGGTGTTCCTTCACCCAGGAAGCAGGGATAGACACAGCG | + |
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Preference number: 1 (lower is better) Translates to: SQPQLNVVLSKSCLG*SWCSFTQEAGIDTA Trigger: CGCTGTGTCTATCCCTGCTTCCTGGGTGAAGGAACACCATGACCAACCAAGGCAGCTCTTAGAAAGAACAACATTTAATTGGGGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR GCA 90 bp | GGAGCTACAAGCCAGCCCCAATTAAATGTTGTTCTTTCTAAGAGCTaGCTTGGTTGGTCATGGTGTTCCTTCACCCAGGAAGCAGGGATA | + |
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Preference number: 1 (lower is better) Translates to: GATSQPQLNVVLSKS*LGWSWCSFTQEAGI Trigger: TATCCCTGCTTCCTGGGTGAAGGAACACCATGACCAACCAAGGCAGCTCTTAGAAAGAACAACATTTAATTGGGGCTGGCTTGTAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR CCA 90 bp | CCCCAATTAAATGTTGTTCTTTCTAAGAGCTGCCTTGGTTGGTCATaGTGTTCCTTCACCCAGGAAGCAGGGATAGACACAGCGGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: PQLNVVLSKSCLGWS*CSFTQEAGIDTAVE Trigger: TTCCACCGCTGTGTCTATCCCTGCTTCCTGGGTGAAGGAACACCATGACCAACCAAGGCAGCTCTTAGAAAGAACAACATTTAATTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR TCA 90 bp | GAGGTGGCAACTGAAGCAGGGTCTCATGTAAGGTTCATGTGGAGTTaGCATAGAGATGCAAACATCCAACAGCAGGCCAGTATAAATAGC | + |
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Preference number: 1 (lower is better) Translates to: EVATEAGSHVRFMWS*HRDANIQQQASINS Trigger: GCTATTTATACTGGCCTGCTGTTGGATGTTTGCATCTCTATGTCAACTCCACATGAACCTTACATGAGACCCTGCTTCAGTTGCCACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR CCA 90 bp | GTCTTTTATTTCTCATGCAGTTATAGAGACTATGCCTCATCCCATTaGTGGGAGTCTGACTTCTGTGGTGGTTTGAATATGCTCCGCCAA | + |
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Preference number: 1 (lower is better) Translates to: VFYFSCSYRDYASSH*WESDFCGGLNMLRQ Trigger: TTGGCGGAGCATATTCAAACCACCACAGAAGTCAGACTCCCACCAATGGGATGAGGCATAGTCTCTATAACTGCATGAGAAATAAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAAGACACTGGCCTTAGCACAGGTCTCACCTCCCAGATCTCACGCTGTAGCTGGAGGACAAAGCTaGCAGGCAAAGCCTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TGKTLALAQVSPPRSHAVAGGQS*QAKPVE Trigger: CTCCACAGGCTTTGCCTGTCAGCTTTGTCCTCCAGC...TACAGCGTGAGATCTGGGAGGTGAGACCTGTGCTAAGGCCAGTGTCTTGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCAAGACACTGGCCTTAGCACAGGTCTCACCTCCCAGATCTCACGCTGTAAAGCAAGAGGCAGGCTaGGGACAGCAGAGCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TGKTLALAQVSPPRSHAVKQEAG*GQQSLS Trigger: TGAAAGGCTCTGCTGTCCCCAGCCTGCCTCTTGCTT...TACAGCGTGAGATCTGGGAGGTGAGACCTGTGCTAAGGCCAGTGTCTTGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR CCA 90 bp | GGACCTCCTCCATACAGGAAAAACCACGGAGCAGTTGCCAGTTTGAGAGTGGGGTTTAATTCCAGCACTTaGGGGGCAGAGGCAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GPPPYRKNHGAVASLRVGFNSST*GAEAGG Trigger: TCCACCTGCCTCTGCCCCCCAAGTGCTGGAATTAAA...CCCCACTCTCAAACTGGCAACTGCTCCGTGGTTTTTCCTGTATGGAGGAGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR TCA 90 bp | GGACCTCCTCCATACAGGAAAAACCACGGAGCAGTTGCCAGTTTGAGAGTGGGGGCAGCTTTCTGCTCTTaGAGGCTCTGTGGTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GPPPYRKNHGAVASLRVGAAFCS*RLCGEE Trigger: TTCTTCACCACAGAGCCTTCAAGAGCAGAAAGCTGC...CCCCACTCTCAAACTGGCAACTGCTCCGTGGTTTTTCCTGTATGGAGGAGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTCGTCTGGGAAAGCAGAGGTGTGTCAGGTTTCAGAGCACATTTATGAACCCACAGTCATGCTTCTaGGATGGCTGCCCACCAACC | + |
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Preference number: 2 (lower is better) Translates to: VARLGKQRCVRFQSTFMNPQSCF*DGCPPT Trigger: GGTTGGTGGGCAGCCATCTCAGAAGCATGACTGTGG...GTTCATAAATGTGCTCTGAAACCTGACACACCTCTGCTTTCCCAGACGAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAAGACACTGGCCTTAGCACAGGTCTCACCTCCCAGATCTCACGCTGTAGTAGGCTGGGGACCTTaGGGAATTTGTCATGATTCG | + |
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Preference number: 2 (lower is better) Translates to: TGKTLALAQVSPPRSHAVVGWGP*GICHDS Trigger: CGAATCATGACAAATTCCTCAAGGTCCCCAGCCTAC...TACAGCGTGAGATCTGGGAGGTGAGACCTGTGCTAAGGCCAGTGTCTTGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR GCA 90 bp | GACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCAAGATCCAGCCAAGGCAGGCCTaGGAACCAGAGTCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: DLEEFVMIRWEMFEMFKIQPRQA*EPESQA Trigger: GGCCTGTGACTCTGGTTCGCAGGCCTGCCTTGGCTG...GATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR GCA 90 bp | GTAAATCTGACGGTGGGTGACCTGACAGGACATGTAGATGAGACTGTCAGAAAGCTATGCCCGCCTGGATaGTGCCGTGCTTTCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VNLTVGDLTGHVDETVRKLCPPG*CRAFCH Trigger: ATGGCAGAAAGCACGGCAGCATCCAGGCGGGCATAG...CTTTCTGACAGTCTCATCTACATGTCCTGTCAGGTCACCCACCGTCAGATTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAAGAGCTGCCTTGGTTGGTCATGGTGTTCCTTCACCCAGGAAGCAGGGATAACACAGCGGTGGAAGTaGATGGAAGACAAGGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: SKSCLGWSWCSFTQEAGITQRWK*MEDKGD Trigger: ATCCCCCTTGTCTTCCATCCACTTCCACCGCTGTGT...TATCCCTGCTTCCTGGGTGAAGGAACACCATGACCAACCAAGGCAGCTCTTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR TCA 90 bp | CCGCCTGGATGCTGCCGTGCTTTCTGCCATGATGATAATGGACCGAACCTCTGGAGGTTCATGTGGAGTTaGCATAGAGATGCAAACATC | + |
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Preference number: 2 (lower is better) Translates to: PPGCCRAFCHDDNGPNLWRFMWS*HRDANI Trigger: GATGTTTGCATCTCTATGTCAACTCCACATGAACCT...CCAGAGGTTCGGTCCATTATCATCATGGCAGAAAGCACGGCAGCATCCAGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTGGGCTTCCAGAGACCCTCCTCCTAGTTGATCGGAAGACATCTTCTGTTATAAATAGCCATGTCTaGTTCCTGCAGCCTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GGGLPETLLLVDRKTSSVINSHV*FLQPPV Trigger: AACTGGAGGCTGCAGGAAGCAGACATGGCTATTTAT...AACAGAAGATGTCTTCCGATCAACTAGGAGGAGGGTCTCTGGAAGCCCACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCACACTATCAGACCATTaGCTGAGGAAGGCTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: AGDLEEFVMIRWEMFEMFTLSDH*LRKAAG Trigger: GCCTGCAGCCTTCCTCAGCCAATGGTCTGATAGTGT...GAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTCCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTATAGAGACTATGCCTCATCCCATTGGTGGGAGTCTGACTTCTGTGGTGAGCGGTGGAAGTGGATaGAAGACAAGGGGGATAGAG | + |
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Preference number: 2 (lower is better) Translates to: AVIETMPHPIGGSLTSVVSGGSG*KTRGIE Trigger: CTCTATCCCCCTTGTCTTCCATCCACTTCCACCGCT...CACCACAGAAGTCAGACTCCCACCAATGGGATGAGGCATAGTCTCTATAACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR TCA 90 bp | GGACCTCCTCCATACAGGAAAAACCACGGAGCAGTTGCCAGTTTGAGAGTGGGGGCCATCTCTCACACATaGGAAGTTGTAATCTATGAC | + |
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Preference number: 2 (lower is better) Translates to: GPPPYRKNHGAVASLRVGAISHT*EVVIYD Trigger: GTCATAGATTACAACTTCTCATGTGTGAGAGATGGC...CCCCACTCTCAAACTGGCAACTGCTCCGTGGTTTTTCCTGTATGGAGGAGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAGTGGAGACAGAGAGCAGTTTTCACTCAACAAAGGTGGCTCGTCTGGGAACACAGAGTCTGTTGTaGGATCAGGAGACACCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LQVETESSFHSTKVARLGTQSLL*DQETPV Trigger: CACTGGTGTCTCCTGATCGCACAACAGACTCTGTGT...TCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTGTCTCCACTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR CCA 90 bp | ACGGTGGGTGACCTGACAGGACATGTAGATGAGACTGTCAGAAAGCATAATTTTAGAGCTATGCCCGCCTaGATGCTGCCGTGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: TVGDLTGHVDETVRKHNFRAMPA*MLPCFL Trigger: CAGAAAGCACGGCAGCATCCAGGCGGGCATAGCTCT...AAAATTATGCTTTCTGACAGTCTCATCTACATGTCCTGTCAGGTCACCCACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR TCA 90 bp | TATGGCTGTTTTGTGCTAAAGGACCTGACTGGGGTCAGTGCAAGAGACACTATCTTGAAGGCTCTGTGGTaGAGAAATCCCCTGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: YGCFVLKDLTGVSARDTILKALW*RNPLLA Trigger: AGCAAGCAGGGGATTTCTTCACCACAGAGCCTTCAA...GATAGTGTCTCTTGCACTGACCCCAGTCAGGTCCTTTAGCACAAAACAGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCAAGATCAGACACCAGTGTGCCTaGGTGTCTACTTCCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: DLEEFVMIRWEMFEMFKIRHQCA*VSTSLC Trigger: GCACAGGGAAGTAGACACCCAGGCACACTGGTGTCT...GATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR-3UTR TCA 90 bp | ACGGTGGGTGACCTGACAGGACATGTAGATGAGACTGTCAGAAAGCATAATTTTCAAAGAGGTGGCAACTaGAGCAGGGTCTCATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: TVGDLTGHVDETVRKHNFQRGGN*SRVSCK Trigger: CTTACATGAGACCCTGCTTCAGTTGCCACCTCTTTG...AAAATTATGCTTTCTGACAGTCTCATCTACATGTCCTGTCAGGTCACCCACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR-3UTR TCA 90 bp | GACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCAAGATCTCCCAAGATGATATATaGCACTCTGCAGCCATAATC | + |
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Preference number: 2 (lower is better) Translates to: DLEEFVMIRWEMFEMFKISQDDI*HSAAII Trigger: GATTATGGCTGCAGAGTGTCATATATCATCTTGGGA...GATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CAA 90 bp | TTCTGTAATTCTTTCCGTTATCAACAACTTTCTGAATGTCACACCTaGCTAAAGGAAGTGAGACAACAAAATGTCAAACACAAAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: FCNSFRYQQLSECHT*LKEVRQQNVKHKRP Trigger: AGGCCTTTTGTGTTTGACATTTTGTTGTCTCACTTCCTTTAGCAAGGTGTGACATTCAGAAAGTTGTTGATAACGGAAAGAATTACAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR TCA 72 bp | TGGTGTGGGCCAGGTTTCGAGGCTGGAGGACAAAGCTaGCAGGCAAAGCCTGTGGAGTGTCGGCGAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: WCGPGFEAGGQS*QAKPVECRRGD Trigger: GTCACCTCGCCGACACTCCACAGGCTTTGCCTGTCAGCTTTGTCCTCCAGCCTCGAAACCTGGCCCACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 72 bp | GCAGTGTCTCCACTGGTGTGGGCCAGGTTTCGAGGCTaGAGGACAAAGCTGACAGGCAAAGCCTGTGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: AVSPLVWARFRG*RTKLTGKACGV Trigger: CACTCCACAGGCTTTGCCTGTCAGCTTTGTCCTCCAGCCTCGAAACCTGGCCCACACCAGTGGAGACACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR TCA 72 bp | GATGGGACGCCTGCCAGAGGCAGAGACAGTGACATCTaGAGGGACAGGCAAGACACTGGCCTTAGCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: DGTPARGRDSDI*RDRQDTGLSTG Trigger: ACCTGTGCTAAGGCCAGTGTCTTGCCTGTCCCTTCAGATGTCACTGTCTCTGCCTCTGGCAGGCGTCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR TCA 72 bp | TGGGGTCAGTGCAAGAGACACTATCAGACCATTGGCTaGGGAAGGCTGCAGGCTCCTGGGCTAAAGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: WGQCKRHYQTIG*GRLQAPGLKAS Trigger: GGATGCCTTTAGCCCAGGAGCCTGCAGCCTTCCTCAGCCAATGGTCTGATAGTGTCTCTTGCACTGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 72 bp | ATCTCAAAGACTCAGCATGCAGGGCAGTGTCTCCACTaGTGTGGGCCAGGTTTCGAGGCTGGAGGACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: ISKTQHAGQCLH*CGPGFEAGGQS Trigger: GCTTTGTCCTCCAGCCTCGAAACCTGGCCCACACCAGTGGAGACACTGCCCTGCATGCTGAGTCTTTGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 72 bp | CCAGGAAGCAGGGATAGACACAGCGGTGGAAGTGGATaGAAGACAAGGGGGATAGAGCCAGCAGAGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PGSRDRHSGGSG*KTRGIEPAEEK Trigger: TTTCTCCTCTGCTGGCTCTATCCCCCTTGTCTTCCATCCACTTCCACCGCTGTGTCTATCCCTGCTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR CCA 72 bp | TATGCTCCGCCAATGAGGTGGCACTGTTGGAAGGTGTaGCCTTGTTGGAGGAAGTATGTCACTGTGGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: YAPPMRWHCWKV*PCWRKYVTVGV Trigger: CACCCCCACAGTGACATACTTCCTCCAACAAGGCCACACCTTCCAACAGTGCCACCTCATTGGCGGAGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR GCA 72 bp | GGGACCTCCTCCATACAGGAAAAACCACGGAGCAGTTaGCAGTTTGAGAGTGGGGGACCACTGAATGTAGAC | + |
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Preference number: 3 (lower is better) Translates to: GTSSIQEKPRSS*QFESGGPLNVD Trigger: GTCTACATTCAGTGGTCCCCCACTCTCAAACTGGCAACTGCTCCGTGGTTTTTCCTGTATGGAGGAGGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR TCA 72 bp | CTGTGGGGGTGGGCTTCCAGAGACCCTCCTCCTAGTTaGTCGGAAGACATCTTCTGTTTGCCTTCAGAACAA | + |
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Preference number: 3 (lower is better) Translates to: LWGWASRDPPPS*SEDIFCLPSEQ Trigger: TTGTTCTGAAGGCAAACAGAAGATGTCTTCCGATCAACTAGGAGGAGGGTCTCTGGAAGCCCACCCCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| 3UTR GCA 72 bp | CACATGAAAGCTACACTCACCACACAGAGTCTGTTGTaGGATCAGGAGACACCAGTGTGCCTGGGTGTCTAC | + |
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Preference number: 3 (lower is better) Translates to: HMKATLTTQSLL*DQETPVCLGVY Trigger: GTAGACACCCAGGCACACTGGTGTCTCCTGATCGCACAACAGACTCTGTGTGGTGAGTGTAGCTTTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 72 bp | AGAGTCTGTTGTGCGATCAGGAGACACCAGTGTGCCTaGGTGTCTACTTCCCTGTGCTTTAAGCCATCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RVCCAIRRHQCA*VSTSLCFKPSL Trigger: GAGAGATGGCTTAAAGCACAGGGAAGTAGACACCCAGGCACACTGGTGTCTCCTGATCGCACAACAGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR CCA 72 bp | AGAGTCCATGAAATGGGAGTATACAGCTCTCTAGGCTaGGCAGAAAGTCATAGCCCCACCCCCTTCAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: RVHEMGVYSSLG*AESHSPTPFKW Trigger: CCACTTGAAGGGGGTGGGGCTATGACTTTCTGCCCAGCCTAGAGAGCTGTATACTCCCATTTCATGGACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| 3UTR TCA 72 bp | GAAAGCAGAGGTGTGTCAGGTTTCAGAGCACATTTATaGACAAGGCACTTGATGGGACGCCTGCCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESRGVSGFRAHL*TRHLMGRLPEA Trigger: TGCCTCTGGCAGGCGTCCCATCAAGTGCCTTGTTCATAAATGTGCTCTGAAACCTGACACACCTCTGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR TCA 72 bp | CATCCCATTGGTGGGAGTCTGACTTCTGTGGTGGTTTaGATATGCTCCGCCAATGAGGTGGCACTGTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HPIGGSLTSVVV*ICSANEVALLE Trigger: TTCCAACAGTGCCACCTCATTGGCGGAGCATATTCAAACCACCACAGAAGTCAGACTCCCACCAATGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR GCA 72 bp | GAACAAGATATAGAACTCTCAGCTTCTCCAGAGCTATaGCCGCCTGGATGCTGCCGTGCTTTCTGCCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: EQDIELSASPEL*PPGCCRAFCHD Trigger: ATCATGGCAGAAAGCACGGCAGCATCCAGGCGGGCATAGCTCTGGAGAAGCTGAGAGTTCTATATCTTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR TCA 72 bp | GCAAAGATTCCGAAGATCTGGCCACAGTCATGCTTCTaGGATGGCTGCCCACCAACCTACTCTGAGAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: AKIPKIWPQSCF*DGCPPTYSENK Trigger: CTTATTCTCAGAGTAGGTTGGTGGGCAGCCATCTCAGAAGCATGACTGTGGCCAGATCTTCGGAATCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR TCA 72 bp | TCAGGTCTCCAATACTGGGACACGGAATCCTGCAGCTaGACTAAAGAAGCCTACAAAGAGGCAAAGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGLQYWDTESCS*TKEAYKEAKRW Trigger: CCACCTCTTTGCCTCTTTGTAGGCTTCTTTAGTTCAGCTGCAGGATTCCGTGTCCCAGTATTGGAGACCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR CCA 72 bp | CAGAGAGCAGTTTTCACTCAACAAAGGTGGCTCGTCTaGGAAAGCAGAGGTGTGTCAGGTTTCAGAGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: QRAVFTQQRWLV*ESRGVSGFRAH Trigger: ATGTGCTCTGAAACCTGACACACCTCTGCTTTCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR CCA 72 bp | AAGTGGAGACAGAGAGCAGTTTTCACTCAACAAAGGTaGCTCGTCTGGGAAAGCAGAGGTGTGTCAGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KWRQRAVFTQQR*LVWESRGVSGF Trigger: GAAACCTGACACACCTCTGCTTTCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTGTCTCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR CCA 72 bp | TGGTTTGAATATGCTCCGCCAATGAGGTGGCACTGTTaGAAGGTGTGGCCTTGTTGGAGGAAGTATGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: WFEYAPPMRWHC*KVWPCWRKYVT Trigger: AGTGACATACTTCCTCCAACAAGGCCACACCTTCCAACAGTGCCACCTCATTGGCGGAGCATATTCAAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAAATCTGACGGTGGGTGACCTGACAGGACATGTAGATGAGACTGTCAGAAAGGAAGGTGTGGCCTTGTaGGAGGAAGTATGTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VNLTVGDLTGHVDETVRKEGVAL*EEVCHC Trigger: ACAGTGACATACTTCCTCCAACAAGGCCACACCTTC...CTTTCTGACAGTCTCATCTACATGTCCTGTCAGGTCACCCACCGTCAGATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR TCA 72 bp | GTACACTGTAGGCTGGGGACCTTGAGGAATTTGTCATaGTTCGCTGGGAGATGTTCGAGATGTTCAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: VHCRLGTLRNLS*FAGRCSRCSRS Trigger: AGATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTCCCCAGCCTACAGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR TCA 72 bp | ACTGAAGCAGGGTCTCATGTAAGGTTCATGTGGAGTTaGCATAGAGATGCAAACATCCAACAGCAGGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TEAGSHVRFMWS*HRDANIQQQAS Trigger: ACTGGCCTGCTGTTGGATGTTTGCATCTCTATGTCAACTCCACATGAACCTTACATGAGACCCTGCTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR TCA 72 bp | CTAAAGAAGCCTACAAAGAGGCAAAGAGGTGGCAACTaGAGCAGGGTCTCATGTAAGGTTCATGTGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LKKPTKRQRGGN*SRVSCKVHVEL Trigger: CAACTCCACATGAACCTTACATGAGACCCTGCTTCAGTTGCCACCTCTTTGCCTCTTTGTAGGCTTCTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR CCA 72 bp | AATGTTGTTCTTTCTAAGAGCTGCCTTGGTTGGTCATaGTGTTCCTTCACCCAGGAAGCAGGGATAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: NVVLSKSCLGWS*CSFTQEAGIDT Trigger: TGTGTCTATCCCTGCTTCCTGGGTGAAGGAACACCATGACCAACCAAGGCAGCTCTTAGAAAGAACAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR CCA 72 bp | CGTGCTTTCTGCCATGATGATAATGGACCGAACCTCTaGAGCTACAAGCCAGCCCCAATTAAATGTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RAFCHDDNGPNL*SYKPAPIKCCS Trigger: AGAACAACATTTAATTGGGGCTGGCTTGTAGCTCCAGAGGTTCGGTCCATTATCATCATGGCAGAAAGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR TCA 72 bp | ATTCTTAAGTTCAGGTACACTGTAGGCTGGGGACCTTaGGGAATTTGTCATGATTCGCTGGGAGATGTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: ILKFRYTVGWGP*GICHDSLGDVR Trigger: TCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTCCCCAGCCTACAGTGTACCTGAACTTAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR CCA 72 bp | TCATGCAGTTATAGAGACTATGCCTCATCCCATTGGTaGGAGTCTGACTTCTGTGGTGGTTTGAATATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SCSYRDYASSHW*ESDFCGGLNML Trigger: GAGCATATTCAAACCACCACAGAAGTCAGACTCCCACCAATGGGATGAGGCATAGTCTCTATAACTGCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR CCA 72 bp | CAATTAAATGTTGTTCTTTCTAAGAGCTGCCTTGGTTaGTCATGGTGTTCCTTCACCCAGGAAGCAGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: QLNVVLSKSCLG*SWCSFTQEAGI Trigger: TATCCCTGCTTCCTGGGTGAAGGAACACCATGACCAACCAAGGCAGCTCTTAGAAAGAACAACATTTAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| 3UTR CCA 72 bp | TTCTCATGCAGTTATAGAGACTATGCCTCATCCCATTaGTGGGAGTCTGACTTCTGTGGTGGTTTGAATATG | + |
|
Preference number: 3 (lower is better) Translates to: FSCSYRDYASSH*WESDFCGGLNM Trigger: CATATTCAAACCACCACAGAAGTCAGACTCCCACCAATGGGATGAGGCATAGTCTCTATAACTGCATGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGGGACACAGCCAAGGCAGGCCTGCGAACCAGAGTCACAGGCCAAACTGGTTTGGCTGTACCATaGGTGGCTCAAGGCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDRDTAKAGLRTRVTGQTGLAVP*VAQGAS Trigger: AGAAGCGCCTTGAGCCACTCATGGTACAGCCAAACC...AGTTTGGCCTGTGACTCTGGTTCGCAGGCCTGCCTTGGCTGTGTCCCTGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGGGACACAGCCAAGGCAGGCCTGCGAACCAGAGTCACAGGCCAAACTCCTGGCTTCTGGGTTTaGCTGTACCATGAGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EDRDTAKAGLRTRVTGQTPGFWV*LYHEWL Trigger: GAGCCACTCATGGTACAGCCAAACCCAGAAGCCAGG...AGTTTGGCCTGTGACTCTGGTTCGCAGGCCTGCCTTGGCTGTGTCCCTGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGGCAGGGGCAGAGGCAGCAGCTTTCTGCTCTTGAAGGCTCTGTGGTGAAGTTCTCCACCAGACCCTaGGCCTTGACTGGGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGQGQRQQLSALEGSVVKFSTRP*ALTGLT Trigger: TGTCAACCCAGTCAAGGCCCAGGGTCTGGTGGAGAA...CTTCACCACAGAGCCTTCAAGAGCAGAAAGCTGCTGCCTCTGCCCCTGCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR TCA 90 bp | TCATTCACCAGAGGGGCAGAATGTTGCTCTTCTTGTGCTAGGGCAGGGGCAGGGTCCAGCAGTGCCCTCTaGTTGTCCAGCTTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFTRGAECCSSCARAGAGSSSAL*LSSFSC Trigger: GCAGCTGAAGCTGGACAATCAGAGGGCACTGCTGGA...CCCTGCCCCTGCCCTAGCACAAGAAGAGCAACATTCTGCCCCTCTGGTGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCAGGGGCAGAGGCAGCAGCTTTCTGCTCTTGAAGGCTCTGTGGTGAAGCCCACAGAGAGAACCTaGGGCTTGCTTTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QGQGQRQQLSALEGSVVKPTERT*GLLSKS Trigger: GGATTTGGAAAGCAAGCCTCAGGTTCTCTCTGTGGG...CTTCACCACAGAGCCTTCAAGAGCAGAAAGCTGCTGCCTCTGCCCCTGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | GGACCTCCTCCATACAGGAAAAACCACGGAGCAGTTGCCAGTTTGAGAGTGGGGGGGGCTTTCCCCATCTaGACTCCCTTCCGTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPPPYRKNHGAVASLRVGGAFPI*TPFRAF Trigger: GAAGGCACGGAAGGGAGTGCAGATGGGGAAAGCCCC...CCCCACTCTCAAACTGGCAACTGCTCCGTGGTTTTTCCTGTATGGAGGAGGTCC 58% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR CAA 72 bp | GCCAATGAGGTGGCACTGTTGGAAGGTGTGGCCTTGTaGGAGGAAGTATGTCACTGTGGGGGTGGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ANEVALLEGVAL*EEVCHCGGGLP Trigger: TGGAAGCCCACCCCCACAGTGACATACTTCCTCCAACAAGGCCACACCTTCCAACAGTGCCACCTCATTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTGGAGACAGAGAGCAGTTTTCACTCAACAAAGGTGGCTCGTCTGGGACTTTACACTTCACCGTaGCACCCCGAGGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVETESSFHSTKVARLGLYTSP*HPEGQG Trigger: GCCCTGCCCCTCGGGGTGTCACGGTGAAGTGTAAAG...TCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTGTCTCCACTTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| 3UTR CAA 72 bp | GAGCACATGAAAGCTACACTCACCACACAGAGTCTGTaGTGCGATCAGGAGACACCAGTGTGCCTGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EHMKATLTTQSL*CDQETPVCLGV Trigger: GACACCCAGGCACACTGGTGTCTCCTGATCGCACAACAGACTCTGTGTGGTGAGTGTAGCTTTCATGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGCAAGACACTGGCCTTAGCACAGGTCTCACCTCCCAGATCTCACGCTGTATGTTCATCCCCGGGATaGTCACAGACATTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGKTLALAQVSPPRSHAVCSSPG*SQTFSW Trigger: CCAGGAAAATGTCTGTGATCATCCCGGGGATGAACA...TACAGCGTGAGATCTGGGAGGTGAGACCTGTGCTAAGGCCAGTGTCTTGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | TCATTCACCAGAGGGGCAGAATGTTGCTCTTCTTGTGCTAGGGCAGGGGCAGGGAGAGAACCTGAGGCTTaGTTTCCAAATCCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFTRGAECCSSCARAGAGREPEA*FPNPEP Trigger: AGGCTCAGGATTTGGAAAGCAAGCCTCAGGTTCTCT...CCCTGCCCCTGCCCTAGCACAAGAAGAGCAACATTCTGCCCCTCTGGTGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | TTATGGCTGTTTTGTGCTAAAGGACCTGACTGGGGTCAGTGCAAGAGACACTATTCCTGTCTCCGAGGCTaGTTTCTGGCTGGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWLFCAKGPDWGQCKRHYSCLRG*FLAGCS Trigger: GCTGCAGCCAGCCAGAAAGCAGCCTCGGAGACAGGA...ATAGTGTCTCTTGCACTGACCCCAGTCAGGTCCTTTAGCACAAAACAGCCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | TCATTCACCAGAGGGGCAGAATGTTGCTCTTCTTGTGCTAGGGCAGGGGCAGGGCTAGAAGAAATATCTTaGGGTTCTCCTCCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTRGAECCSSCARAGAGLEEIS*GSPPVP Trigger: TGGAACGGGAGGAGAACCGCAAGATATTTCTTCTAG...CCCTGCCCCTGCCCTAGCACAAGAAGAGCAACATTCTGCCCCTCTGGTGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | TCATTCACCAGAGGGGCAGAATGTTGCTCTTCTTGTGCTAGGGCAGGGGCAGGGTGGAGACCAGGTAGTTaGACGTTTTGCTCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFTRGAECCSSCARAGAGWRPGS*TFCSFS Trigger: GGAAAAAGAGCAAAACGTCCAACTACCTGGTCTCCA...CCCTGCCCCTGCCCTAGCACAAGAAGAGCAACATTCTGCCCCTCTGGTGAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGTGGAGACAGAGAGCAGTTTTCACTCAACAAAGGTGGCTCGTCTGGGAGAAGTTTTTCACGGATaGCTGGGTGACTCTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVETESSFHSTKVARLGEVFHG*LGDSAV Trigger: CACGGCAGAGTCACCCAGGCATCCGTGAAAAACTTC...TCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTGTCTCCACTTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGGACAGGCAAGACACTGGCCTTAGCACAGGTCTCACCTCCCAGATCTCACTTTGTTTTGCCATTTTaGAAGCAAGCTCTCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGTGKTLALAQVSPPRSHFVLPF*KQALVF Trigger: GAACACGAGAGCTTGCTTTCAAAATGGCAAAACAAA...GTGAGATCTGGGAGGTGAGACCTGTGCTAAGGCCAGTGTCTTGCCTGTCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGTGGAGACAGAGAGCAGTTTTCACTCAACAAAGGTGGCTCGTCTGGGAAGAGGCCACGGTCCATaGCTTTCTTATCCCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQVETESSFHSTKVARLGRGHGP*LSYPWL Trigger: TAACCAGGGATAAGAAAGGCATGGACCGTGGCCTCT...TCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTGTCTCCACTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | GACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCAAGATCGCTTGCTGTCAAAGCTaGACAGCCCGATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLEEFVMIRWEMFEMFKIACCQS*TARWRR Trigger: CCTTCGCCATCGGGCTGTCCAGCTTTGACAGCAAGC...GATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | TTATGGCTGTTTTGTGCTAAAGGACCTGACTGGGGTCAGTGCAAGAGACACTATAGGCGCTTCTTTCTCTaGTTCTTCTCCAGCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWLFCAKGPDWGQCKRHYRRFFL*FFSSSA Trigger: GGCACTGCTGGAGAAGAAGCAGAGAAAGAAGCGCCT...ATAGTGTCTCTTGCACTGACCCCAGTCAGGTCCTTTAGCACAAAACAGCCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGCGATCAGGAGACACCAGTGTGCCTGGGTGTCTACTTCCCTGTGCTTTGGTAGTTGGACGTTTTaGTCTTTTTCCGCTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CCAIRRHQCAWVSTSLCFGSWTF*SFSAFY Trigger: GTAGAAAGCGGAAAAAGAGCAAAACGTCCAACTACC...AAAGCACAGGGAAGTAGACACCCAGGCACACTGGTGTCTCCTGATCGCACAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGTTTTGTGCTAAAGGACCTGACTGGGGTCAGTGCAAGAGACACTATCTGGCTGTACCATGAGTaGCTCAAGGCGCTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGCFVLKDLTGVSARDTIWLYHE*LKALLS Trigger: AGAAAGAAGCGCCTTGAGCCACTCATGGTACAGCCA...GATAGTGTCTCTTGCACTGACCCCAGTCAGGTCCTTTAGCACAAAACAGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACACCAGTGTGCCTGGGTGTCTACTTCCCTGTGCTTTAAGCCATCTCTCATGCCTTTCTTATCCCTaGTTACTTTACACTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GDTSVPGCLLPCALSHLSCLSYP*LLYTSP Trigger: CGGTGAAGTGTAAAGTAACCAGGGATAAGAAAGGCA...TGAGAGATGGCTTAAAGCACAGGGAAGTAGACACCCAGGCACACTGGTGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTGGAGACAGAGAGCAGTTTTCACTCAACAAAGGTGGCTCGTCTGGGATCAGGGTCATTCCCGTaGACGATCTGGAAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQVETESSFHSTKVARLGSGSFP*TIWKFF Trigger: GAAAAACTTCCAGATCGTCCACGGGAATGACCCTGA...TCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTGTCTCCACTTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR TCA 90 bp | GACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCAAGATCTTTTGGAGAATCTCCTaGAGGTCTGGCTTGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLEEFVMIRWEMFEMFKIFWRIS*RSGLGA Trigger: AGCCCCCAAGCCAGACCTTCAGGAGATTCTCCAAAA...GATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACACCAGTGTGCCTGGGTGTCTACTTCCCTGTGCTTTAAGCCATCTCTCACGATCAGGTTCTCCATaGATTTGTTTTGCCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDTSVPGCLLPCALSHLSRSGSP*ICFAIL Trigger: CAAAATGGCAAAACAAATCCATGGAGAACCTGATCG...TGAGAGATGGCTTAAAGCACAGGGAAGTAGACACCCAGGCACACTGGTGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTTATAGAGACTATGCCTCATCCCATTGGTGGGAGTCTGACTTCTGTGGTGCCACATACTTCCTTGTaGATTGTCTTCTTACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVIETMPHPIGGSLTSVVPHTSL*IVFLLS Trigger: GGACAGTAAGAAGACAATTCACAAGGAAGTATGTGG...CACCACAGAAGTCAGACTCCCACCAATGGGATGAGGCATAGTCTCTATAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTGTCTACTTCCCTGTGCTTTAAGCCATCTCTCACACATGAGAAGTTGTACTGGGTTGACACCATaGTCATACACTGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGCLLPCALSHLSHMRSCTGLTP*SYTVNL Trigger: CAAGTTCACAGTGTATGACCATGGTGTCAACCCAGT...ACAACTTCTCATGTGTGAGAGATGGCTTAAAGCACAGGGAAGTAGACACCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS-3UTR TCA 90 bp | GACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCAAGATCTTGCTTTCCAAATCCTaGGCCTCTGGCTTAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLEEFVMIRWEMFEMFKILLSKS*ASGLRK Trigger: TTTCCTTAAGCCAGAGGCTCAGGATTTGGAAAGCAA...GATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS CCA 90 bp | TGCTGGGCTGTCACACCGGAAGCTCCTGTCTCCGAGGCTGCTTTCTaGCTGGCTGCAGCACTCTCCTCTGAGCGAGCCGACGGGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CWAVTPEAPVSEAAF*LAAALSSERADGEL Trigger: CAGCTCCCCGTCGGCTCGCTCAGAGGAGAGTGCTGCAGCCAGCCAGAAAGCAGCCTCGGAGACAGGAGCTTCCGGTGTGACAGCCCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS TCA 90 bp | GCTGGACCGTCGATGCCGTGTAGGATGACGTCGCTGCGAGGCATCTaGGGGTCCACCAGAGGCGTGTGCTCCTCACTGCCTCGTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPSMPCRMTSLRGI*GSTRGVCSSLPRGF Trigger: AAAGCCACGAGGCAGTGAGGAGCACACGCCTCTGGTGGACCCTCAGATGCCTCGCAGCGACGTCATCCTACACGGCATCGACGGTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
||
| CDS GCA 90 bp | CGCTGCGAGGCATCTGAGGGTCCACCAGAGGCGTGTGCTCCTCACTaGCTCGTGGCTTTAACCTTCGCAGCCTGGCTTCTGGGTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCEASEGPPEACAPH*LVALTFAAWLLGLA Trigger: AGCCAAACCCAGAAGCCAGGCTGCGAAGGTTAAAGCCACGAGGCAGTGAGGAGCACACGCCTCTGGTGGACCCTCAGATGCCTCGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | CAGGGGCAGGGGCAGAGGCAGCAGCTTTCTGCTCTTGAAGGCTCTGTGGTGAAGCCCGATGGCGAAGGCTaGAAGTGCGCACAGTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: QGQGQRQQLSALEGSVVKPDGEG*KCAQWV Trigger: TACCCACTGTGCGCACTTCAAGCCTTCGCCATCGGG...CTTCACCACAGAGCCTTCAAGAGCAGAAAGCTGCTGCCTCTGCCCCTGCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | GCTGGGGACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCTTCCACACCGGGGCCTaGTTGTGCAGCTCGATCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGDLEEFVMIRWEMFEMFFHTGA*LCSSIR Trigger: CCTGATCGAGCTGCACAACAAGGCCCCGGTGTGGAA...GAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTCCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS TCA 90 bp | CACGGTCCATGCCTTTCTTATCCCTGGTTACTTTACACTTCACCGTaGCACCCCGAGGGGCAGGGCTATACGCAAAGTCCTCTAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: HGPCLSYPWLLYTSP*HPEGQGYTQSPLNS Trigger: AGAATTTAGAGGACTTTGCGTATAGCCCTGCCCCTCGGGGTGTCACGGTGAAGTGTAAAGTAACCAGGGATAAGAAAGGCATGGACCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CCA 90 bp | GAAATATCTTGCGGTTCTCCTCCCGTTCCAGGTGCATATAGTAGGTaGGGAAGAGGCCACGGTCCATGCCTTTCTTATCCCTGGTTACTT | + |
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Preference number: 5 (lower is better) Translates to: EISCGSPPVPGAYSR*GRGHGPCLSYPWLL Trigger: AAGTAACCAGGGATAAGAAAGGCATGGACCGTGGCCTCTTCCCCACCTACTATATGCACCTGGAACGGGAGGAGAACCGCAAGATATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | TGGCTGTTTTGTGCTAAAGGACCTGACTGGGGTCAGTGCAAGAGACACTATCAGGCTAGAAGAAATATCTaGCGGTTCTCCTCCCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: WLFCAKGPDWGQCKRHYQARRNI*RFSSRS Trigger: GGAACGGGAGGAGAACCGCAAGATATTTCTTCTAGC...CTGATAGTGTCTCTTGCACTGACCCCAGTCAGGTCCTTTAGCACAAAACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | CTTCAAGTGGAGACAGAGAGCAGTTTTCACTCAACAAAGGTGGCTCGTCTGGGACAAGATGCCGTGTTTTaGGAGAATCTCCTGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LQVETESSFHSTKVARLGQDAVF*ENLLKV Trigger: GACCTTCAGGAGATTCTCCAAAAACACGGCATCTTG...TCCCAGACGAGCCACCTTTGTTGAGTGAAAACTGCTCTCTGTCTCCACTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | GCTGGGGACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCTTGGTCCCCATGAGATaGGATCTGAGTTTGCCAATG | + |
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Preference number: 5 (lower is better) Translates to: AGDLEEFVMIRWEMFEMFLVPMR*DLSLPM Trigger: CATTGGCAAACTCAGATCCAATCTCATGGGGACCAA...GAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTCCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS TCA 90 bp | GTTGTGCAGCTCGATCAGGTTCTCCATGGATTTGTTTTGCCATTTTaGAAGCAAGCTCTCGTGTTCATTTCGTGGCCTGAAAGGGATGCG | + |
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Preference number: 5 (lower is better) Translates to: VVQLDQVLHGFVLPF*KQALVFISWPERDA Trigger: CGCATCCCTTTCAGGCCACGAAATGAACACGAGAGCTTGCTTTCAAAATGGCAAAACAAATCCATGGAGAACCTGATCGAGCTGCACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS GCA 90 bp | GAGACAAATCTGTCGGGTCTGTGGAGACCAGGTAGTTGGACGTTTTaGTCTTTTTCCGCTTTCTACCGGCTAGAAGAAATATCTTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: ETNLSGLWRPGSWTF*SFSAFYRLEEISCG Trigger: ACCGCAAGATATTTCTTCTAGCCGGTAGAAAGCGGAAAAAGAGCAAAACGTCCAACTACCTGGTCTCCACAGACCCGACAGATTTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | ACAGGCAAGACACTGGCCTTAGCACAGGTCTCACCTCCCAGATCTCACGCTGTAATTTGTTTTGCCATTTaGAAAGCAAGCTCTCGTGTT | + |
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Preference number: 5 (lower is better) Translates to: TGKTLALAQVSPPRSHAVICFAI*KASSRV Trigger: AACACGAGAGCTTGCTTTCAAAATGGCAAAACAAAT...TACAGCGTGAGATCTGGGAGGTGAGACCTGTGCTAAGGCCAGTGTCTTGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | TTATGGCTGTTTTGTGCTAAAGGACCTGACTGGGGTCAGTGCAAGAGACACTATTCATACACTGTGAACTaGGTCCCCATGAGATTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LWLFCAKGPDWGQCKRHYSYTVN*VPMRLD Trigger: ATCCAATCTCATGGGGACCAAGTTCACAGTGTATGA...ATAGTGTCTCTTGCACTGACCCCAGTCAGGTCCTTTAGCACAAAACAGCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | TTATGGCTGTTTTGTGCTAAAGGACCTGACTGGGGTCAGTGCAAGAGACACTATATTTTCCTGGGACCTTaGAAACCGAGGACATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LWLFCAKGPDWGQCKRHYIFLGP*KPRTFV Trigger: AACAAATGTCCTCGGTTTCAAAGGTCCCAGGAAAAT...ATAGTGTCTCTTGCACTGACCCCAGTCAGGTCCTTTAGCACAAAACAGCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS-3UTR CAA 90 bp | ACGGTGGGTGACCTGACAGGACATGTAGATGAGACTGTCAGAAAGCATAATTTTATACTTCCTTGTGAATaGTCTTCTTACTGTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: TVGDLTGHVDETVRKHNFILPCE*SSYCPR Trigger: GCGGGGACAGTAAGAAGACAATTCACAAGGAAGTAT...AAAATTATGCTTTCTGACAGTCTCATCTACATGTCCTGTCAGGTCACCCACCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157005.3 |
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| CDS-3UTR CAA 90 bp | GACCTTGAGGAATTTGTCATGATTCGCTGGGAGATGTTCGAGATGTTCAAGATCAGGTTCTCCATGGATTaGTTTTGCCATTTTGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: DLEEFVMIRWEMFEMFKIRFSMD*FCHFES Trigger: GCTTTCAAAATGGCAAAACAAATCCATGGAGAACCT...GATCTTGAACATCTCGAACATCTCCCAGCGAATCATGACAAATTCCTCAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CCA 72 bp | GTCACACCGGAAGCTCCTGTCTCCGAGGCTGCTTTCTaGCTGGCTGCAGCACTCTCCTCTGAGCGAGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: VTPEAPVSEAAF*LAAALSSERAD Trigger: GTCGGCTCGCTCAGAGGAGAGTGCTGCAGCCAGCCAGAAAGCAGCCTCGGAGACAGGAGCTTCCGGTGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS TCA 72 bp | TCGATGCCGTGTAGGATGACGTCGCTGCGAGGCATCTaGGGGTCCACCAGAGGCGTGTGCTCCTCACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SMPCRMTSLRGI*GSTRGVCSSLP Trigger: AGGCAGTGAGGAGCACACGCCTCTGGTGGACCCTCAGATGCCTCGCAGCGACGTCATCCTACACGGCATCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS GCA 72 bp | GCATCTGAGGGTCCACCAGAGGCGTGTGCTCCTCACTaGCTCGTGGCTTTAACCTTCGCAGCCTGGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASEGPPEACAPH*LVALTFAAWLL Trigger: CAGAAGCCAGGCTGCGAAGGTTAAAGCCACGAGGCAGTGAGGAGCACACGCCTCTGGTGGACCCTCAGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CCA 72 bp | AGCTCCTGGCGGGTGTGGGCCTTCTCCACCAGACCCTaGGCCTTGACTGGGTTGACACCATGGTCATACACT | + |
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Preference number: 6 (lower is better) Translates to: SSWRVWAFSTRP*ALTGLTPWSYT Trigger: AGTGTATGACCATGGTGTCAACCCAGTCAAGGCCCAGGGTCTGGTGGAGAAGGCCCACACCCGCCAGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CCA 72 bp | AAATTCTCCACTTCTCCAAGCTGGGCGTCACCCTGCTaGGCTGTCACACCGGAAGCTCCTGTCTCCGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: KFSTSPSWASPC*AVTPEAPVSEA Trigger: AGCCTCGGAGACAGGAGCTTCCGGTGTGACAGCCCAGCAGGGTGACGCCCAGCTTGGAGAAGTGGAGAATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS GCA 72 bp | TCTAAATTCTCCACTTCTCCAAGCTGGGCGTCACCCTaGTGGGCTGTCACACCGGAAGCTCCTGTCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SKFSTSPSWASP*WAVTPEAPVSE Trigger: CTCGGAGACAGGAGCTTCCGGTGTGACAGCCCAGCAGGGTGACGCCCAGCTTGGAGAAGTGGAGAATTTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CCA 72 bp | TGCGGTTCTCCTCCCGTTCCAGGTGCATATAGTAGGTaGGGAAGAGGCCACGGTCCATGCCTTTCTTATCCC | + |
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Preference number: 6 (lower is better) Translates to: CGSPPVPGAYSR*GRGHGPCLSYP Trigger: GGGATAAGAAAGGCATGGACCGTGGCCTCTTCCCCACCTACTATATGCACCTGGAACGGGAGGAGAACCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CCA 72 bp | TACGCAAAGTCCTCTAAATTCTCCACTTCTCCAAGCTaGGCGTCACCCTGCTGGGCTGTCACACCGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: YAKSSKFSTSPS*ASPCWAVTPEA Trigger: AGCTTCCGGTGTGACAGCCCAGCAGGGTGACGCCCAGCTTGGAGAAGTGGAGAATTTAGAGGACTTTGCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS GCA 72 bp | GACTGGGTGTCGTCATTCCACACCGGGGCCTTGTTGTaGAGCTCGATCAGGTTCTCCATGGATTTGTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: DWVSSFHTGALL*SSIRFSMDLFC Trigger: GCAAAACAAATCCATGGAGAACCTGATCGAGCTGCACAACAAGGCCCCGGTGTGGAATGACGACACCCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CAA 72 bp | CTCATCGTCAAAGGCACTTCCACTCCCCTGGGCTCTTaGAAAGACTGTGTTTGTGCGTGTGTAGGTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LIVKGTSTPLGS*KDCVCACVGSH Trigger: ATGGGAACCTACACACGCACAAACACAGTCTTTCAAAGAGCCCAGGGGAGTGGAAGTGCCTTTGACGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133134.3 |
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| CDS CAA 72 bp | CTCGTCATAGTTCACACTACTCAAGATGCCGTGTTTTaGGAGAATCTCCTGAAGGTCTGGCTTGGGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LVIVHTTQDAVF*ENLLKVWLGGC Trigger: ACAGCCCCCAAGCCAGACCTTCAGGAGATTCTCCAAAAACACGGCATCTTGAGTAGTGTGAACTATGACGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS GCA 72 bp | TGTCAGGCTCCTCGTCATAGTTCACACTACTCAAGATaGCGTGTTTTTGGAGAATCTCCTGAAGGTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CQAPRHSSHYSR*RVFGESPEGLA Trigger: AGCCAGACCTTCAGGAGATTCTCCAAAAACACGGCATCTTGAGTAGTGTGAACTATGACGAGGAGCCTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS GCA 72 bp | CTGTCGGGTCTGTGGAGACCAGGTAGTTGGACGTTTTaGTCTTTTTCCGCTTTCTACCGGCTAGAAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: LSGLWRPGSWTF*SFSAFYRLEEI Trigger: TATTTCTTCTAGCCGGTAGAAAGCGGAAAAAGAGCAAAACGTCCAACTACCTGGTCTCCACAGACCCGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS GCA 72 bp | TCTTTTTCCGCTTTCTACCGGCTAGAAGAAATATCTTaGGGTTCTCCTCCCGTTCCAGGTGCATATAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SFSAFYRLEEIS*GSPPVPGAYSR Trigger: CCTACTATATGCACCTGGAACGGGAGGAGAACCGCAAGATATTTCTTCTAGCCGGTAGAAAGCGGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS CAA 72 bp | TTGACTGGGTTGACACCATGGTCATACACTGTGAACTaGGTCCCCATGAGATTGGATCTGAGTTTGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: LTGLTPWSYTVN*VPMRLDLSLPM Trigger: CATTGGCAAACTCAGATCCAATCTCATGGGGACCAAGTTCACAGTGTATGACCATGGTGTCAACCCAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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| CDS TCA 72 bp | CTCGATCAGGTTCTCCATGGATTTGTTTTGCCATTTTaGAAGCAAGCTCTCGTGTTCATTTCGTGGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LDQVLHGFVLPF*KQALVFISWPE Trigger: TTCAGGCCACGAAATGAACACGAGAGCTTGCTTTCAAAATGGCAAAACAAATCCATGGAGAACCTGATCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001562.9 |
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