Pregenerated sensors for TULP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037446Ensembl transcript IDs: ENSMUST00000041819.14, ENSMUST00000114794.2, ENSMUST00000123797.8, ENSMUST00000129375.8, ENSMUST00000131604.3, ENSMUST00000148188.9, ENSMUST00000233420.2, ENSMUST00000233921.2
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCGGCTTGTTATGGAGCTCGATGAGACTCTCCAGGGTCTTGTTCTaGCAGCGCACTAGCAGCCCATCGCTGGCGTTTCGGGGCCGGATA | + |
|
Preference number: 1 (lower is better) Translates to: GGLLWSSMRLSRVLF*QRTSSPSLAFRGRI Trigger: TATCCGGCCCCGAAACGCCAGCGATGGGCTGCTAGTGCGCTGGCAGAACAAGACCCTGGAGAGTCTCATCGAGCTCCATAACAAGCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| 3UTR GCA 90 bp | TGGCGCAGGCTTCCCACGTCACCACCTCCCCCTCGCTGTGGGTTCTaGCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGAC | + |
|
Preference number: 1 (lower is better) Translates to: WRRLPTSPPPPRCGF*PLSKTVKRFPKRLD Trigger: GTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGACGTGGGAAGCCTGCGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| 3UTR TCA 90 bp | ATATTCCGTCCGGTCTCTTGGTGCTTGCCGCCAAGTTTGATGACCTaGAAGTGGCTCTCAGTGCTCAGAGGGAAAGAGAGAGCTAACTCC | + |
|
Preference number: 1 (lower is better) Translates to: IFRPVSWCLPPSLMT*KWLSVLRGKERANS Trigger: GGAGTTAGCTCTCTCTTTCCCTCTGAGCACTGAGAGCCACTTTCAGGTCATCAAACTTGGCGGCAAGCACCAAGAGACCGGACGGAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR TCA 90 bp | CAGTGCTCAGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTTaGTGGTGCACACACAAACACACAAGGGGATGTATGCTTCCACCC | + |
|
Preference number: 1 (lower is better) Translates to: QCSEGKRELTPVGCP*WCTHKHTRGCMLPP Trigger: GGGTGGAAGCATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCTGAGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGGAGGGGGCGAGCTTCCATGGGAGCTGTaGGGGAGGGACCTTGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: RTSDSGSLTGSDWGGGGELPWEL*GRDLAT Trigger: GGTGGCAAGGTCCCTCCCCCACAGCTCCCATGGAAG...CTCGCCCCCTCCTCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR-3UTR GCA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGACATCTCCATCCCCTCTaGCTCAGCCGGTGCCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGHLHPL*LSRCQA Trigger: AGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATG...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR-3UTR CCA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGACTTCCATGGGAGCTGTaGGGGAGGGACCTTGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGLPWEL*GRDLAT Trigger: GGTGGCAAGGTCCCTCCCCCACAGCTCCCATGGAAG...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCGTGGGGGAGGGACCTTaGCACCCCCAACCGAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: EEGARQVLLGDQMFISIPVGEGP*HPQPNA Trigger: AGCATTCGGTTGGGGGTGGCAAGGTCCCTCCCCCAC...GGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR CAA 90 bp | AGCAGCCCATCGCTGGCGTTTCGGGGCCGGATAGGGACCCTCTCGTaGTCCGAGTTCATTCCAGGAATGATGACAGTCATACGGCGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSPSLAFRGRIGTLS*SEFIPGMMTVIRRG Trigger: ACCCCGCCGTATGACTGTCATCATTCCTGGAATGAACTCGGACAACGAGAGGGTCCCTATCCGGCCCCGAAACGCCAGCGATGGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGGTGGGGGAGGGACCTTaGCACCCCCAACCGAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: ASTFGRPDVHLHPLCLSRVGEGP*HPQPNA Trigger: AGCATTCGGTTGGGGGTGGCAAGGTCCCTCCCCCAC...CCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCACTTCCATGGGAGCTGTaGGGGAGGGACCTTGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: YFWATRCSSPSPLPQPVPLPWEL*GRDLAT Trigger: GGTGGCAAGGTCCCTCCCCCACAGCTCCCATGGAAG...TGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTCAGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTTGATGGTGCACGCACTGGGGAGGGAGTaGGATCTCTGTGGGTTCGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLRGKERANSCRLSLMVHALGRE*DLCGFE Trigger: CTCGAACCCACAGAGATCCCACTCCCTCCCCAGTGC...GTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCTGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR CAA 90 bp | TCAGTGCTCAGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTaGATGGTGCACACACAAACACACAAGGGGATGTATGCTTCCACC | + |
|
Preference number: 2 (lower is better) Translates to: SVLRGKERANSCRLS*MVHTQTHKGMYAST Trigger: GGTGGAAGCATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCTGAGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR CAA 90 bp | TGGCTCTCAGTGCTCAGAGGGAAAGAGAGAGCTAACTCCTGTAGGTaGTCCTTGATGGTGCACACACAAACACACAAGGGGATGTATGCT | + |
|
Preference number: 2 (lower is better) Translates to: WLSVLRGKERANSCR*SLMVHTQTHKGMYA Trigger: AGCATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCTGAGCACTGAGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACTATATCCACTGTGCCTGGCATaGATTCAATCCCAGAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LGDSITSSSGWPGTLSLYPLCLA*IQSQRT Trigger: GGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGG...ATATAGTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| 3UTR-3UTR GCA 90 bp | TATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACGCGGTTACAGAAGTGTaGCACTGTGCCTGGCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: YFLETVLQVALAGLEHSHAVTEV*HCAWHE Trigger: TTCATGCCAGGCACAGTGGCACACTTCTGTAACCGC...GTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAAGTGTGCCACTGTGCCTaGCATGAATTCAATCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSIYFLETVLQVALAGLEVCHCA*HEFNPR Trigger: TCTGGGATTGAATTCATGCCAGGCACAGTGGCACAC...TTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGTGTGGGGGAGGGACCTaGCCACCCCCAACCGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGCGGGT*PPPTEC Trigger: GCATTCGGTTGGGGGTGGCAAGGTCCCTCCCCCACA...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR GCA 72 bp | GTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTaGCACCCCCAACCGAATGCTTTCCCAGCGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSPSMGAVGEGP*HPQPNAFPALR Trigger: CCTCAGCGCTGGGAAAGCATTCGGTTGGGGGTGGCAAGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCTGTGGGGGAGGGACCTaGCCACCCCCAACCGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: GRRGRGKYFWATRCSSPSCGGGT*PPPTEC Trigger: GCATTCGGTTGGGGGTGGCAAGGTCCCTCCCCCACA...GGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR GCA 72 bp | CTTCCCACGTCACCACCTCCCCCTCGCTGTGGGTTCTaGCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPTSPPPPRCGF*PLSKTVKRFPK Trigger: CTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGACGTGGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGTGGGGGAGGGACCTaGCCACCCCCAACCGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ASTFGRPDVHLHPLCLSRCGGGT*PPPTEC Trigger: GCATTCGGTTGGGGGTGGCAAGGTCCCTCCCCCACA...CCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGCGAGGCAAGTACTTTaGGGCGACCAGATGTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGARQVL*GDQMFI Trigger: GATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGC...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| 3UTR GCA 72 bp | TTATGGAGCTCGATGAGACTCTCCAGGGTCTTGTTCTaGCAGCGCACTAGCAGCCCATCGCTGGCGTTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: LWSSMRLSRVLF*QRTSSPSLAFR Trigger: CCGAAACGCCAGCGATGGGCTGCTAGTGCGCTGGCAGAACAAGACCCTGGAGAGTCTCATCGAGCTCCATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACGCGGCCGAACTGCAGCACTATATAGTCAGGGTCATCAGCGTGCACAATAGACTCTCCAGGGTCTaGTTCTGCCAGCGCACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SHAAELQHYIVRVISVHNRLSRV*FCQRTS Trigger: GCTAGTGCGCTGGCAGAACAAGACCCTGGAGAGTCT...ATTGTGCACGCTGATGACCCTGACTATATAGTGCTGCAGTTCGGCCGCGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| 3UTR CCA 72 bp | GTGGCCATGCCTTTAATCACTGCACTGGGGAGGGAGTaGGATCTCTGTGGGTTCGAGACCAGCCTGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VAMPLITALGRE*DLCGFETSLFF Trigger: GAAGAACAGGCTGGTCTCGAACCCACAGAGATCCCACTCCCTCCCCAGTGCAGTGATTAAAGGCATGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR GCA 72 bp | ATTTTAGCAGGGCATGGTGGCCATGCCTTTAATCACTaGACTGGGGAGGGAGTGGGATCTCTGTGGGTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: ILAGHGGHAFNH*TGEGVGSLWVR Trigger: TCGAACCCACAGAGATCCCACTCCCTCCCCAGTGCAGTGATTAAAGGCATGGCCACCATGCCCTGCTAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR CCA 72 bp | TTTAATCACTGCACTGGGGAGGGAGTGGGATCTCTGTaGGTTCGAGACCAGCCTGTTCTTCATAGTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FNHCTGEGVGSL*VRDQPVLHSVS Trigger: TGAAACACTATGAAGAACAGGCTGGTCTCGAACCCACAGAGATCCCACTCCCTCCCCAGTGCAGTGATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| 3UTR TCA 72 bp | GAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTTaGTGGTGCACACACAAACACACAAGGGGATGTATG | + |
|
Preference number: 3 (lower is better) Translates to: EGKRELTPVGCP*WCTHKHTRGCM Trigger: CATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCCCGGCCCTGGGGTGCTaGCTGCAGCACAAACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTPALGC*LQHKLP Trigger: CGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGG...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGCCCTGGGGTGCTGGCTaGAGCACAAACTCCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPEVTERGEPFHGSCGGGPWGAG*STNSRG Trigger: ACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGG...CCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCCCCTGGGGTGCTGGCTaGAGCACAAACTCCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTPWGAG*STNSRG Trigger: ACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGG...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR TCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCACCGGTAGTCTAGGGTaGAGGCGTCCTCAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTTGSLG*RRPQPR Trigger: GCGTGGCTGAGGACGCCTTCACCCTAGACTACCGGT...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR GCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCGCTCCTCGTGCTTCCTaGGCCCAGCCCCAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTAPRAS*AQPQLY Trigger: GTAAAGCTGGGGCTGGGCGCAGGAAGCACGAGGAGC...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041819.14 |
||
| CDS-3UTR GCA 90 bp | CGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTGCCCGGCCCTGGGGTaGTGGCTGCAGCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRGVSPSMGAVGEGPCPALG*WLQHKL Trigger: GAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCA...AGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTGCCACCGGCCCTGGGGTGCTaGCTGCAGCACAAACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VTERGEPFHGSCGGGTLPPALGC*LQHKLP Trigger: CGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGG...TGGCAAGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCGCTTCCCGTCGAAGCTaGAGAGGGCGATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTASRRS*RGRWRR Trigger: CCTTCGCCATCGCCCTCTCCAGCTTCGACGGGAAGC...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | CGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTCGCGGCCCTGGAAGTTaGGGGTGTAGGAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRGVSPSMGAVGEGPRGPGS*GCRSHC Trigger: ACAGTGGCTCCTACACCCTCAACTTCCAGGGCCGCG...AGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGACCGGTAGTCTAGGGTaGAGGCGTCCTCAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGTGSLG*RRPQPR Trigger: GCGTGGCTGAGGACGCCTTCACCCTAGACTACCGGT...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR GCA 90 bp | CGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGGAGGGGGCGAGCTCCTTCCTCAAGGCTaGTGGGCTCCCCGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTSDSGSLTGSDWGGGGELLPQG*WAPRGV Trigger: GACCCCGCGGGGAGCCCAGCAGCCTTGAGGAAGGAG...CTCGCCCCCTCCTCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCCCTCGCTGTGGGTTCTaGCCGTTGTCAAAGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTPRCGF*PLSKTV Trigger: CACGGTCTTTGACAACGGGCAGAACCCACAGCGAGG...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCACCTCCCCCTCGCTGTaGGTTCTGCCCGTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTTSPSL*VLPVVK Trigger: TTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGT...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GGGACCTTGCCACCCCCAACCGAATGCTTTCCCAGCGCTGAGGAGCTGTGGGGGGCTTCCCGTCGAAGCTaGAGAGGGCGATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLPPPTECFPSAEELWGASRRS*RGRWRR Trigger: CCTTCGCCATCGCCCTCTCCAGCTTCGACGGGAAGC...CCCCCACAGCTCCTCAGCGCTGGGAAAGCATTCGGTTGGGGGTGGCAAGGTCCC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR GCA 90 bp | ACGTCACCACCTCCCCCTCGCTGTGGGTTCTGCCCGTTGTCAAAGACCGTGAAGCGTGTGGGGGCGCTCTaGGCTCTGCCAGCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSPPPPRCGFCPLSKTVKRVGAL*ALPATE Trigger: CTCTGTGGCTGGCAGAGCGCAGAGCGCCCCCACACG...CTTCACGGTCTTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGACGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR TCA 90 bp | CGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGGAGGGGGCGAGCGCGGCCCTGGAAGTTaGGGGTGTAGGAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTSDSGSLTGSDWGGGGERGPGS*GCRSHC Trigger: ACAGTGGCTCCTACACCCTCAACTTCCAGGGCCGCG...CTCGCCCCCTCCTCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCTCCTTCCTCAAGGCTaGTGGGCTCCCCGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRGRGKYFWATRCSSPSLLPQG*WAPRGV Trigger: GACCCCGCGGGGAGCCCAGCAGCCTTGAGGAAGGAG...GGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCCTCTGCCCTTCTGGTTaGTGTTCTTCATCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTLCPSG*CSSSLR Trigger: CCGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAG...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTAGTAGGACGGGTACATaGCGCGATCCATGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRGVSPSMGAVGEGPSRTGT*RDPCPS Trigger: AGAAGGGCATGGATCGCGGCATGTACCCGTCCTACT...AGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTTCCTCAAGGCTGCTaGGCTCCCCGCGGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGDQMFISIPSASAGARLPQGC*APRGVL Trigger: AAGGACCCCGCGGGGAGCCCAGCAGCCTTGAGGAAG...CCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGTGGGGTCACTGGAGATaGGATAGTTGGCTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPEVTERGEPFHGSCGGGWGHWR*DSWLSY Trigger: GTAAGACAGCCAACTATCTCATCTCCAGTGACCCCA...CCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCGCGGCCCTGGAAGTTaGGGGTGTAGGAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGDQMFISIPSASAGARRGPGS*GCRSHC Trigger: ACAGTGGCTCCTACACCCTCAACTTCCAGGGCCGCG...CCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | CGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTCAGCGTGCACAATCTaGAAGTTCTTGACGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRGVSPSMGAVGEGPSACTI*KFLTEA Trigger: GGCCTCCGTCAAGAACTTTCAGATTGTGCACGCTGA...AGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGACCGGTAGTCTAGGGTaGAGGCGTCCTCAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGDQMFISIPSASAGARTGSLG*RRPQPR Trigger: GCGTGGCTGAGGACGCCTTCACCCTAGACTACCGGT...CCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAACCGGTAGTCTAGGGTaGAGGCGTCCTCAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGTGSLG*RRPQPR Trigger: GCGTGGCTGAGGACGCCTTCACCCTAGACTACCGGT...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCGCAGGCTTCCCACGTCACCACCTCCCCCTCGCTGTGGGTTCTGCCCGTTCTCTGCCCTTCTGGTTaGTGTTCTTCATCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQASHVTTSPSLWVLPVLCPSG*CSSSLR Trigger: CCGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAG...AACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGACGTGGGAAGCCTGCGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR GCA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGACATGCCGCGATCCATaGCCTTCTTGTCCCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGTCRDP*PSCPVS Trigger: TGACACGGGACAAGAAGGGCATGGATCGCGGCATGT...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCATCGCTGGCGTTTCGGGGCCGGATAGGGACCCTCTCGTTGTCCGAGTTCCTGTCTTACTCCGCTTaGGTTTCCTGCCGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSLAFRGRIGTLSLSEFLSYSA*VSCRPG Trigger: TCCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAG...GAACTCGGACAACGAGAGGGTCCCTATCCGGCCCCGAAACGCCAGCGATGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGGGGGGTCCCGCTTCTTaGCCTCGGGGTCCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASTFGRPDVHLHPLCLSRGGPAS*PRGPSG Trigger: TCCTGAGGGACCCCGAGGCCAAGAAGCGGGACCCCC...CCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000041819.14 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCTTCCTCAAGGCTGCTaGGCTCCCCGCGGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRRGRGKYFWATRCSSPSLPQGC*APRGVL Trigger: AAGGACCCCGCGGGGAGCCCAGCAGCCTTGAGGAAG...GGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGCCCCAACCAGGAACATaGCTGCTGGAAACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGPQPGT*LLETPS Trigger: GGAAGGAGTTTCCAGCAGCCATGTTCCTGGTTGGGG...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGGCTTCCCGTCGAAGCTaGAGAGGGCGATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGDQMFISIPSASAGARASRRS*RGRWRR Trigger: CCTTCGCCATCGCCCTCTCCAGCTTCGACGGGAAGC...CCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCGCACTAGCAGCCCATCGCTGGCGTTTCGGGGCCGGATAGGGACCCTCTGGGGTCACTGGAGATaGGATAGTTGGCTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CQRTSSPSLAFRGRIGTLWGHWR*DSWLSY Trigger: GTAAGACAGCCAACTATCTCATCTCCAGTGACCCCA...GAGGGTCCCTATCCGGCCCCGAAACGCCAGCGATGGGCTGCTAGTGCGCTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGACCTCAGCTTCCCGATaGAATTCTCGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGDQMFISIPSASAGARTSASR*NSRLPG Trigger: CCCGGGGAGGCGAGAATTTCATCGGGAAGCTGAGGT...CCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR TCA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAACCTCAGCTTCCCGATaGAATTCTCGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGTSASR*NSRLPG Trigger: CCCGGGGAGGCGAGAATTTCATCGGGAAGCTGAGGT...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR TCA 90 bp | ATCACTGCACTGGGGAGGGAGTGGGATCTCTGTGGGTTCGAGACCAGCCTGTTCCGCGGCCCTGGAAGTTaGGGGTGTAGGAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITALGREWDLCGFETSLFRGPGS*GCRSHC Trigger: ACAGTGGCTCCTACACCCTCAACTTCCAGGGCCGCG...GAACAGGCTGGTCTCGAACCCACAGAGATCCCACTCCCTCCCCAGTGCAGTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR GCA 90 bp | TACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCATGCCCGGCCCTGGGGTaGTGGCTGCAGCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: YFWATRCSSPSPLPQPVPCPALG*WLQHKL Trigger: GAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCA...TGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTGCCATTGGGCCCAGAGCCTTaGCTTTCTTCTCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTERGEPFHGSCGGGTLPLGPEP*LSSLSP Trigger: AGGAGAGAGAGAAGAAAGCCAAGGCTCTGGGCCCAA...TGGCAAGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTTGCCTTTCTCAGTTTaGTTCCCTCCCCTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRGVSPSMGAVGEGPLPFSV*FPPLPP Trigger: AGGAGGTAGGGGAGGGAACCAAACTGAGAAAGGCAA...AGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | CCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTGTCTTCATTCCAGATaGGCGGCTTGTTATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEVTERGEPFHGSCGGGTCLHSR*AACYGA Trigger: AGCTCCATAACAAGCCGCCCATCTGGAATGAAGACA...GGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | CTGCACTGGGGAGGGAGTGGGATCTCTGTGGGTTCGAGACCAGCCTGTTCTTCAACCTCAGCTTCCCGATaGAATTCTCGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHWGGSGISVGSRPACSSTSASR*NSRLPG Trigger: CCCGGGGAGGCGAGAATTTCATCGGGAAGCTGAGGT...TGAAGAACAGGCTGGTCTCGAACCCACAGAGATCCCACTCCCTCCCCAGTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGTGGGGGAGGGACCTTGCCACCCCCAACCGAATGCTTTCCCAGCGCTGAGTCAGCGTGCACAATCTaGAAGTTCTTGACGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCGGGTLPPPTECFPSAESACTI*KFLTEA Trigger: GGCCTCCGTCAAGAACTTTCAGATTGTGCACGCTGA...CTCAGCGCTGGGAAAGCATTCGGTTGGGGGTGGCAAGGTCCCTCCCCCACAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGCCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGCCCTGGGGTGCTGGCTaGAGCACAAACTCCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLPVVKDREAVPQEIRPGPWGAG*STNSRG Trigger: ACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGG...CCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCTGCCCGGCCCTGGGGTaGTGGCTGCAGCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LPVVKDREAVPQEIRPGFCPALG*WLQHKL Trigger: GAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCA...GAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR GCA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGACTGTCTTACTCCGCTTaGGTTTCCTGCCGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGLSYSA*VSCRPG Trigger: TCCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAG...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCGCTGTGGGTTCTGCCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGACAGAGGGACAGGAGTaGAGCTGCACCTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLWVLPVVKDREAVPQETEGQE*SCTSAS Trigger: GGAAGCTGAGGTGCAGCTGCACTCCTGTCCCTCTGT...CTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAGAACCCACAGCGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGAAGCAGTCCTCTTCATaGCCGCTGTCTGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGDQMFISIPSASAGARKQSSS*PLSEAH Trigger: GTGGGCCTCAGACAGCGGCCATGAAGAGGACTGCTT...CCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGAGCTCGGGGGTCCCGCTTCTTaGCCTCGGGGTCCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEVCHCAWHEFNPREPELGGPAS*PRGPSG Trigger: TCCTGAGGGACCCCGAGGCCAAGAAGCGGGACCCCC...GAGCTCGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTGTCTTCATTCCAGATaGGCGGCTTGTTATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRGVSPSMGAVGEGPCLHSR*AACYGA Trigger: AGCTCCATAACAAGCCGCCCATCTGGAATGAAGACA...AGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | CGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGGAGGGGGCGAGCGTTGTCAAAGACCGTaGAGCGGTTCCCCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTSDSGSLTGSDWGGGGERCQRP*SGSPRD Trigger: ATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACG...CTCGCCCCCTCCTCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTCGCGGCCCTGGAAGTTaGGGGTGTAGGAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLLGDQMFISIPSASAGRGPGS*GCRSHC Trigger: ACAGTGGCTCCTACACCCTCAACTTCCAGGGCCGCG...ACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | CGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGGAGGGGGCGAGTCAGCGTGCACAATCTaGAAGTTCTTGACGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSDSGSLTGSDWGGGGESACTI*KFLTEA Trigger: GGCCTCCGTCAAGAACTTTCAGATTGTGCACGCTGA...CTCGCCCCCTCCTCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCCCCAACCAGGAACATaGCTGCTGGAAACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGDQMFISIPSASAGARPQPGT*LLETPS Trigger: GGAAGGAGTTTCCAGCAGCCATGTTCCTGGTTGGGG...CCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | TGGCGCAGGCTTCCCACGTCACCACCTCCCCCTCGCTGTGGGTTCTGCCCGTTGTTAGCTCTGCCCTTCTaGTTGCTGTTCTTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: WRRLPTSPPPPRCGFCPLLALPF*LLFFIT Trigger: AGTGATGAAGAACAGCAACCAGAAGGGCAGAGCTAA...CAACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGACGTGGGAAGCCTGCGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CCA 90 bp | CCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCGAAACCGGCCCTGGGGTGCTaGCTGCAGCACAAACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLSKTVKRFPKRLDQGSKPALGC*LQHKLP Trigger: CGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGG...TTTCGAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CCA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGTGTCTTCATTCCAGATaGGCGGCTTGTTATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGCLHSR*AACYGA Trigger: AGCTCCATAACAAGCCGCCCATCTGGAATGAAGACA...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCTTCCCGTCGAAGCTaGAGAGGGCGATGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVLLGDQMFISIPSASAGASRRS*RGRWRR Trigger: CCTTCGCCATCGCCCTCTCCAGCTTCGACGGGAAGC...ACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCCTCTCGTTGTCCGAGTTCATTCCAGGAATGATGACAGTCATACGGCGGTCCTCAGCTTCCCGATaGAATTCTCGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLSLSEFIPGMMTVIRRSSASR*NSRLPG Trigger: CCCGGGGAGGCGAGAATTTCATCGGGAAGCTGAGGA...CCGCCGTATGACTGTCATCATTCCTGGAATGAACTCGGACAACGAGAGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGAGCTCGCTCCTCGTGCTTCCTaGGCCCAGCCCCAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TEVCHCAWHEFNPREPELAPRAS*AQPQLY Trigger: GTAAAGCTGGGGCTGGGCGCAGGAAGCACGAGGAGC...GAGCTCGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCCATGCCTTTAATCACTGCACTGGGGAGGGAGTGGGATCTCTGTGGGTTCCTGTCTTACTCCGCTTaGGTTTCCTGCCGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAMPLITALGREWDLCGFLSYSA*VSCRPG Trigger: TCCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAG...GAACCCACAGAGATCCCACTCCCTCCCCAGTGCAGTGATTAAAGGCATGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGCCTCGCTGTGGGTTCTaGCCGTTGTCAAAGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASTFGRPDVHLHPLCLSRPRCGF*PLSKTV Trigger: CACGGTCTTTGACAACGGGCAGAACCCACAGCGAGG...CCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCTCAACTTCTGTCCCTaGGCGGGTCGCTGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EASTFGRPDVHLHPLCLSLNFCP*AGRCLG Trigger: CCCCAAACAGCGACCCGCCCAGGGACAGAAGTTGAG...GCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | TACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAACCTCCCCCTCGCTGTaGGTTCTGCCCGTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFWATRCSSPSPLPQPVPTSPSL*VLPVVK Trigger: TTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGT...TGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGGGAAGCCTAAAACATTaGTTTCATAGACCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGGSLKH*FHRPQR Trigger: CCGCTGTGGTCTATGAAACCAATGTTTTAGGCTTCC...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| 3UTR CAA 72 bp | ACGTCACCACCTCCCCCTCGCTGTGGGTTCTGCCCGTaGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: TSPPPPRCGFCP*SKTVKRFPKRL Trigger: TAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCTCTGCCCTTCTGGTTaGTGTTCTTCATCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRGRGKYFWATRCSSPSLCPSG*CSSSLR Trigger: CCGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAG...GGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCCTGTCTTACTCCGCTTaGGTTTCCTGCCGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPVVKDREAVPQEIRPGFLSYSA*VSCRPG Trigger: TCCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAG...GAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCAAGCAGTCCTCTTCATaGCCGCTGTCTGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EASTFGRPDVHLHPLCLSKQSSS*PLSEAH Trigger: GTGGGCCTCAGACAGCGGCCATGAAGAGGACTGCTT...GCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTTGGGCCCAGAGCCTTaGCTTTCTTCTCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEGARQVLLGDQMFISIPLGPEP*LSSLSP Trigger: AGGAGAGAGAGAAGAAAGCCAAGGCTCTGGGCCCAA...GGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR TCA 90 bp | ATCACTGCACTGGGGAGGGAGTGGGATCTCTGTGGGTTCGAGACCAGCCTGTTCTGGGGTCACTGGAGATaGGATAGTTGGCTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ITALGREWDLCGFETSLFWGHWR*DSWLSY Trigger: GTAAGACAGCCAACTATCTCATCTCCAGTGACCCCA...GAACAGGCTGGTCTCGAACCCACAGAGATCCCACTCCCTCCCCAGTGCAGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR TCA 90 bp | CCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCGAAAACCTCAGCTTCCCGATaGAATTCTCGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSKTVKRFPKRLDQGSKTSASR*NSRLPG Trigger: CCCGGGGAGGCGAGAATTTCATCGGGAAGCTGAGGT...TTTCGAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR TCA 90 bp | GCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTCAGCGTGCACAATCTaGAAGTTCTTGACGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASTFGRPDVHLHPLCLSRSACTI*KFLTEA Trigger: GGCCTCCGTCAAGAACTTTCAGATTGTGCACGCTGA...CCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR GCA 90 bp | GGACAATCCTCTATTTTAGCAGGGCATGGTGGCCATGCCTTTAATCACTGCACTCCCTGGGGTGCTGGCTaGAGCACAAACTCCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQSSILAGHGGHAFNHCTPWGAG*STNSRG Trigger: ACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGG...AGTGCAGTGATTAAAGGCATGGCCACCATGCCCTGCTAAAATAGAGGATTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCAGTAGGACGGGTACATaGCGCGATCCATGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EASTFGRPDVHLHPLCLSSRTGT*RDPCPS Trigger: AGAAGGGCATGGATCGCGGCATGTACCCGTCCTACT...GCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCGAGTAGGACGGGTACATaGCGCGATCCATGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPLSKTVKRFPKRLDQGSSRTGT*RDPCPS Trigger: AGAAGGGCATGGATCGCGGCATGTACCCGTCCTACT...CGAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CCA 90 bp | TACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCACAGGAACATGGCTGCTaGAAACTCCTTCCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFWATRCSSPSPLPQPVPQEHGC*KLLPQG Trigger: GCCTTGAGGAAGGAGTTTCCAGCAGCCATGTTCCTG...TGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGCAGGAACATGGCTGCTaGAAACTCCTTCCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASTFGRPDVHLHPLCLSRQEHGC*KLLPQG Trigger: GCCTTGAGGAAGGAGTTTCCAGCAGCCATGTTCCTG...CCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | CGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGGAGGGGGCGAGTTAGCTCTGCCCTTCTaGTTGCTGTTCTTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTSDSGSLTGSDWGGGGELALPF*LLFFIT Trigger: AGTGATGAAGAACAGCAACCAGAAGGGCAGAGCTAA...CTCGCCCCCTCCTCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| 3UTR CAA 72 bp | TCGCTGGCGTTTCGGGGCCGGATAGGGACCCTCTCGTaGTCCGAGTTCATTCCAGGAATGATGACAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLAFRGRIGTLS*SEFIPGMMTVI Trigger: TATGACTGTCATCATTCCTGGAATGAACTCGGACAACGAGAGGGTCCCTATCCGGCCCCGAAACGCCAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGAGCTCGCCCTGTTGAGTGGTTaGACAGGAAGCAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVCHCAWHEFNPREPELALLSG*TGSKAL Trigger: CAGAGCCTTGCTTCCTGTTCAACCACTCAACAGGGC...GAGCTCGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTCTCCTTCCTCAAGGCTaGTGGGCTCCCCGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQLYLFLGDSITSSSGWPLLPQG*WAPRGV Trigger: GACCCCGCGGGGAGCCCAGCAGCCTTGAGGAAGGAG...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGCTTCATCACTGCGGATaGAACCTCCTCTTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASTFGRPDVHLHPLCLSRLHHCG*NLLFHF Trigger: GAAGTGGAAGAGGAGGTTGCATCCGCAGTGATGAAG...CCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | TATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACCCCTGGGGTGCTGGCTaGAGCACAAACTCCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFLETVLQVALAGLEHSHPWGAG*STNSRG Trigger: ACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGG...GTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | CGGTTACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGACATGCCGCGATCCATaGCCTTCTTGTCCCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLQKCATVPGMNSIPENPTCRDP*PSCPVS Trigger: TGACACGGGACAAGAAGGGCATGGATCGCGGCATGT...CGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGTAACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGTTCTGCCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGAACATGCCGCGATCCATaGCCTTCTTGTCCCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWVLPVVKDREAVPQEIRTCRDP*PSCPVS Trigger: TGACACGGGACAAGAAGGGCATGGATCGCGGCATGT...TCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCAGAACCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACTATATCTTCCTCAAGGCTGCTaGGCTCCCCGCGGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGDSITSSSGWPGTLSLYLPQGC*APRGVL Trigger: AAGGACCCCGCGGGGAGCCCAGCAGCCTTGAGGAAG...ATATAGTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGCCGGCCCTGGGGTGCTaGCTGCAGCACAAACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIYFLETVLQVALAGLPALGC*LQHKLP Trigger: CGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGG...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | GTTCGAGACCAGCCTGTTCTTCATAGTGTTTCAGAACAGCCAAGTCAGTATAGTCCGGCCCTGGGGTGCTaGCTGCAGCACAAACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VRDQPVLHSVSEQPSQYSPALGC*LQHKLP Trigger: CGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGG...ACTATACTGACTTGGCTGTTCTGAAACACTATGAAGAACAGGCTGGTCTCGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CCA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGAGGAAGCCTAAAACATTaGTTTCATAGACCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGGSLKH*FHRPQR Trigger: CCGCTGTGGTCTATGAAACCAATGTTTTAGGCTTCC...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTCTTCATCACTGCGGATaGAACCTCCTCTTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVLLGDQMFISIPSASAGLHHCG*NLLFHF Trigger: GAAGTGGAAGAGGAGGTTGCATCCGCAGTGATGAAG...ACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR GCA 90 bp | CGGTTACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGCTCTGCCCTTCTGGTTaGTGTTCTTCATCACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQKCATVPGMNSIPENPLCPSG*CSSSLR Trigger: CCGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAG...CGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGTAACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTTTGCCTTTCTCAGTTTaGTTCCCTCCCCTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLLGDQMFISIPSASAGLPFSV*FPPLPP Trigger: AGGAGGTAGGGGAGGGAACCAAACTGAGAAAGGCAA...ACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTTAGCTCTGCCCTTCTaGTTGCTGTTCTTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: EEGARQVLLGDQMFISIPLALPF*LLFFIT Trigger: AGTGATGAAGAACAGCAACCAGAAGGGCAGAGCTAA...GGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CCA 90 bp | TACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCATGTCTTCATTCCAGATaGGCGGCTTGTTATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFWATRCSSPSPLPQPVPCLHSR*AACYGA Trigger: AGCTCCATAACAAGCCGCCCATCTGGAATGAAGACA...TGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR TCA 90 bp | CGGTTACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGTGGGGTCACTGGAGATaGGATAGTTGGCTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLQKCATVPGMNSIPENPWGHWR*DSWLSY Trigger: GTAAGACAGCCAACTATCTCATCTCCAGTGACCCCA...CGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGTAACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAATGCCCGGCCCTGGGGTaGTGGCTGCAGCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIYFLETVLQVALAGLECPALG*WLQHKL Trigger: GAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCA...TTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | CATAGTGTTTCAGAACAGCCAAGTCAGTATAGTGAGACCTTGTCTTGCCAATCATGCCCGGCCCTGGGGTaGTGGCTGCAGCACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HSVSEQPSQYSETLSCQSCPALG*WLQHKL Trigger: GAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCA...TGATTGGCAAGACAAGGTCTCACTATACTGACTTGGCTGTTCTGAAACACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTTGATGGTGCACACACAACCTCGCTGTGGGTTCTaGCCGTTGTCAAAGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGKERANSCRLSLMVHTQPRCGF*PLSKTV Trigger: CACGGTCTTTGACAACGGGCAGAACCCACAGCGAGG...TTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGACCTCAGCTTCCCGATaGAATTCTCGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIYFLETVLQVALAGLTSASR*NSRLPG Trigger: CCCGGGGAGGCGAGAATTTCATCGGGAAGCTGAGGT...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGTGGCCGGAGGAATCTaGGGCACGTGCAGACTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLYLFLGDSITSSSGWPVAGGI*GTCRLK Trigger: CTTGAGTCTGCACGTGCCTCAGATTCCTCCGGCCAC...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCTCTTAAAGGACAATCCTCTATTTTAGCAGGGCATGGTGGCCATGCCTTTACATGCCGCGATCCATaGCCTTCTTGTCCCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PALKGQSSILAGHGGHAFTCRDP*PSCPVS Trigger: TGACACGGGACAAGAAGGGCATGGATCGCGGCATGT...AAAGGCATGGCCACCATGCCCTGCTAAAATAGAGGATTGTCCTTTAAGAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGTAGGTTGTCCTTGATGGTGCACACACAAACACACAAGGGGATGTATGCTAGTAGGACGGGTACATaGCGCGATCCATGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCRLSLMVHTQTHKGMYASRTGT*RDPCPS Trigger: AGAAGGGCATGGATCGCGGCATGTACCCGTCCTACT...AGCATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACTATATAAGCAGTCCTCTTCATaGCCGCTGTCTGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGDSITSSSGWPGTLSLYKQSSS*PLSEAH Trigger: GTGGGCCTCAGACAGCGGCCATGAAGAGGACTGCTT...ATATAGTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGCTCAACTTCTGTCCCTaGGCGGGTCGCTGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIYFLETVLQVALAGLLNFCP*AGRCLG Trigger: CCCCAAACAGCGACCCGCCCAGGGACAGAAGTTGAG...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| 3UTR CAA 72 bp | GTGCTCAGAGGGAAAGAGAGAGCTAACTCCTGTAGGTaGTCCTTGATGGTGCACACACAAACACACAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRGKERANSCR*SLMVHTQTHKG Trigger: CCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCTGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR TCA 90 bp | GGACAATCCTCTATTTTAGCAGGGCATGGTGGCCATGCCTTTAATCACTGCACTCGTTGTCAAAGACCGTaGAGCGGTTCCCCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQSSILAGHGGHAFNHCTRCQRP*SGSPRD Trigger: ATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACG...AGTGCAGTGATTAAAGGCATGGCCACCATGCCCTGCTAAAATAGAGGATTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACAGTAGGACGGGTACATaGCGCGATCCATGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFLETVLQVALAGLEHSHSRTGT*RDPCPS Trigger: AGAAGGGCATGGATCGCGGCATGTACCCGTCCTACT...GTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGCTGTCTTACTCCGCTTaGGTTTCCTGCCGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSIYFLETVLQVALAGLLSYSA*VSCRPG Trigger: TCCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAG...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGCCTCGCTGTGGGTTCTaGCCGTTGTCAAAGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIYFLETVLQVALAGLPRCGF*PLSKTV Trigger: CACGGTCTTTGACAACGGGCAGAACCCACAGCGAGG...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGACCTCCCCCTCGCTGTaGGTTCTGCCCGTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSIYFLETVLQVALAGLTSPSL*VLPVVK Trigger: TTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGT...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGAGCTCGGAAGCCTAAAACATTaGTTTCATAGACCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVCHCAWHEFNPREPELGSLKH*FHRPQR Trigger: CCGCTGTGGTCTATGAAACCAATGTTTTAGGCTTCC...GAGCTCGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACTATATCCTGGCCCTGTTGAGTaGTTGAACAGGAAGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGDSITSSSGWPGTLSLYPGPVE*LNRKQG Trigger: GCCTTGCTTCCTGTTCAACCACTCAACAGGGCCAGG...ATATAGTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCGAAATGTTGGGGTCACTGGAGATaGGATAGTTGGCTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKTVKRFPKRLDQGSKCWGHWR*DSWLSY Trigger: GTAAGACAGCCAACTATCTCATCTCCAGTGACCCCA...ACATTTCGAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGATCCCTGGCCCTGTTaGGTGGTTGAACAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQLYLFLGDSITSSSGWPDPWPC*VVEQEA Trigger: TGCTTCCTGTTCAACCACTCAACAGGGCCAGGGATC...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTCCCCAACCAGGAACATaGCTGCTGGAAACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLYLFLGDSITSSSGWPPQPGT*LLETPS Trigger: GGAAGGAGTTTCCAGCAGCCATGTTCCTGGTTGGGG...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | CTTCATAGTGTTTCAGAACAGCCAAGTCAGTATAGTGAGACCTTGTCTTGCCAAACCTCCCCCTCGCTGTaGGTTCTGCCCGTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHSVSEQPSQYSETLSCQTSPSL*VLPVVK Trigger: TTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGT...TTGGCAAGACAAGGTCTCACTATACTGACTTGGCTGTTCTGAAACACTATGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCACACACAAACACACAAGGGGATGTATGCTTCCACCCGAAGCCCAATAGTGGAAGCCTAAAACATTaGTTTCATAGACCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GAHTNTQGDVCFHPKPNSGSLKH*FHRPQR Trigger: CCGCTGTGGTCTATGAAACCAATGTTTTAGGCTTCC...ACTATTGGGCTTCGGGTGGAAGCATACATCCCCTTGTGTGTTTGTGTGTGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGTTGGGCCCAGAGCCTTaGCTTTCTTCTCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSIYFLETVLQVALAGLLGPEP*LSSLSP Trigger: AGGAGAGAGAGAAGAAAGCCAAGGCTCTGGGCCCAA...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTCAGGAACATGGCTGCTaGAAACTCCTTCCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQLYLFLGDSITSSSGWPQEHGC*KLLPQG Trigger: GCCTTGAGGAAGGAGTTTCCAGCAGCCATGTTCCTG...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTTGATGGTGCACACACAATGTCTTCATTCCAGATaGGCGGCTTGTTATGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGKERANSCRLSLMVHTQCLHSR*AACYGA Trigger: AGCTCCATAACAAGCCGCCCATCTGGAATGAAGACA...TTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACGTTGTCAAAGACCGTaGAGCGGTTCCCCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSIYFLETVLQVALAGLERCQRP*SGSPRD Trigger: ATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACG...TTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTTTGCCTTTCTCAGTTTaGTTCCCTCCCCTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLYLFLGDSITSSSGWPLPFSV*FPPLPP Trigger: AGGAGGTAGGGGAGGGAACCAAACTGAGAAAGGCAA...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| 3UTR CAA 72 bp | AGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTaGATGGTGCACACACAAACACACAAGGGGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RGKERANSCRLS*MVHTQTHKGMY Trigger: ATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTGTTTCAGAACAGCCAAGTCAGTATAGTGAGACCTTGTCTTGCCAATCATTCAGCGTGCACAATCTaGAAGTTCTTGACGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVFQNSQVSIVRPCLANHSACTI*KFLTEA Trigger: GGCCTCCGTCAAGAACTTTCAGATTGTGCACGCTGA...ATGATTGGCAAGACAAGGTCTCACTATACTGACTTGGCTGTTCTGAAACACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACTTCATCACTGCGGATaGAACCTCCTCTTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIYFLETVLQVALAGLELHHCG*NLLFHF Trigger: GAAGTGGAAGAGGAGGTTGCATCCGCAGTGATGAAG...TTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAATTAGCTCTGCCCTTCTaGTTGCTGTTCTTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSIYFLETVLQVALAGLELALPF*LLFFIT Trigger: AGTGATGAAGAACAGCAACCAGAAGGGCAGAGCTAA...TTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAACAGCCAAGTCAGTATAGTGAGACCTTGTCTTGCCAATCATCTTGATTCATCAAGGTACCATTaGGAATATCCCAGCACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FQNSQVSIVRPCLANHLDSSRYH*EYPSTY Trigger: GTAGGTGCTGGGATATTCCCAATGGTACCTTGATGA...ATCAAGATGATTGGCAAGACAAGGTCTCACTATACTGACTTGGCTGTTCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS GCA 90 bp | CAGCGCGCGGCTCTGCCGAGTCTGCGGGCGGCTCCTCGTGCTTCCTaGGCCCAGCCCCAGCTTTACGGGGTTTGGATTCCAGGGAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QRAALPSLRAAPRAS*AQPQLYGVWIPGSR Trigger: CCGACTCCCTGGAATCCAAACCCCGTAAAGCTGGGGCTGGGCGCAGGAAGCACGAGGAGCCGCCCGCAGACTCGGCAGAGCCGCGCGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 |
||
| CDS GCA 90 bp | GCCGCGATCCATGCCCTTCTTGTCCCGTGTCAGCCGGCAGCGGACTaGCCGGCCCTGGGGTGCTGGCTGCAGCACAAACTCCCGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAIHALLVPCQPAAD*PALGCWLQHKLPGF Trigger: GAACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCAGTCCGCTGCCGGCTGACACGGGACAAGAAGGGCATGGATCGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000131604.3 ENSMUST00000233420.2 |
||
| CDS CCA 90 bp | CTTGTCCCGTGTCAGCCGGCAGCGGACTGCCCGGCCCTGGGGTGCTaGCTGCAGCACAAACTCCCGGGGTTCACCCACTTCCACAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVPCQPAADCPALGC*LQHKLPGFTHFHRG Trigger: CCCCCTGTGGAAGTGGGTGAACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCAGTCCGCTGCCGGCTGACACGGGACAAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000131604.3 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCTTGCCACCCCCAACCGAATGCTTTCCCAGCGCTGAGGAGCTGTGGGGGCGGGGGTCCCGCTTCTaGGCCTCGGGGTCCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTLPPPTECFPSAEELWGRGSRF*ASGSLR Trigger: CCTGAGGGACCCCGAGGCCAAGAAGCGGGACCCCCG...CCCCCACAGCTCCTCAGCGCTGGGAAAGCATTCGGTTGGGGGTGGCAAGGTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000041819.14 |
||
| CDS CCA 90 bp | TTTCCCGGGGGTCCCGCTTCTTGGCCTCGGGGTCCCTCAGGAACTTaGCGTAGACTGTCTGCGCAGCGCGCGGCTCTGCCGAGTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FPGGPASWPRGPSGT*RRLSAQRAALPSLR Trigger: CCGCAGACTCGGCAGAGCCGCGCGCTGCGCAGACAGTCTACGCCAAGTTCCTGAGGGACCCCGAGGCCAAGAAGCGGGACCCCCGGGAAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 |
||
| CDS GCA 90 bp | CTTCTTGTCCCGTGTCAGCCGGCAGCGGACTGCCCGGCCCTGGGGTaGTGGCTGCAGCACAAACTCCCGGGGTTCACCCACTTCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLVPCQPAADCPALG*WLQHKLPGFTHFHR Trigger: CCTGTGGAAGTGGGTGAACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCAGTCCGCTGCCGGCTGACACGGGACAAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000131604.3 ENSMUST00000233420.2 |
||
| CDS GCA 90 bp | CGGGAGACTTCTCTGGAGCACCCCGTGTGGGGGCGCTCTGCGCTCTaGCAGCCACAGAGGGACAGGAGTGCAGCTGCACCTCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RETSLEHPVWGRSAL*QPQRDRSAAAPQLP Trigger: GGGAAGCTGAGGTGCAGCTGCACTCCTGTCCCTCTGTGGCTGGCAGAGCGCAGAGCGCCCCCACACGGGGTGCTCCAGAGAAGTCTCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS CCA 90 bp | ATGCCCTTCTTGTCCCGTGTCAGCCGGCAGCGGACTGCCCGGCCCTaGGGTGCTGGCTGCAGCACAAACTCCCGGGGTTCACCCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MPFLSRVSRQRTARP*GAGCSTNSRGSPTS Trigger: GGAAGTGGGTGAACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCAGTCCGCTGCCGGCTGACACGGGACAAGAAGGGCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000131604.3 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGCGATCCATGCCCTTCTaGTCCCGTGTCAGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPEVTERGEPFHGSCGGGRSMPF*SRVSRQ Trigger: CTGCCGGCTGACACGGGACAAGAAGGGCATGGATCG...CCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGGCTGTCTTACTCCGCTaGCGTTTCCTGCCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPEVTERGEPFHGSCGGGAVLLR*RFLPAR Trigger: CCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAGC...CCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTGGGCGGGTCGCTGTTaGGGGCGCAGCGGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EEGARQVLLGDQMFISIPWAGRC*GRSGGS Trigger: CGAGCCCCCGCTGCGCCCCAAACAGCGACCCGCCCA...GGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTTGGGCGGGTCGCTGTTaGGGGCGCAGCGGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QVLLGDQMFISIPSASAGWAGRC*GRSGGS Trigger: CGAGCCCCCGCTGCGCCCCAAACAGCGACCCGCCCA...ACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | CGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGACCTTGTGGGTTCTGCCCGTaGTCAAAGACCGTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSRRGVSPSMGAVGEGPCGFCP*SKTVKR Trigger: CCGCTTCACGGTCTTTGACAACGGGCAGAACCCACA...AGGTCCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS CCA 90 bp | TCTTCACACCCTTCTCAGCCGCGCCACCTTCCCCAACCAGGAACATaGCTGCTGGAAACTCCTTCCTCAAGGCTGCTGGGCTCCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSHPSQPRHLPQPGT*LLETPSSRLLGSPR Trigger: CCGCGGGGAGCCCAGCAGCCTTGAGGAAGGAGTTTCCAGCAGCCATGTTCCTGGTTGGGGAAGGTGGCGCGGCTGAGAAGGGTGTGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGGAGGTCACGGAGAGGGGTGAGCCCTTCCATGGGAGCTGTGGGGGAGGGTTTGCCTTTCTCAGTTaGGTTCCCTCCCCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPEVTERGEPFHGSCGGGFAFLS*VPSPTS Trigger: GGAGGTAGGGGAGGGAACCAAACTGAGAAAGGCAAA...CCCTCCCCCACAGCTCCCATGGAAGGGCTCACCCCTCTCCGTGACCTCCGGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCGCAGGCTTCCCACGTCACCACCTCCCCCTCGCTGTGGGTTCTGCCCGTTGCTCTGCCCTTCTGGTaGCTGTTCTTCATCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LAQASHVTTSPSLWVLPVALPFW*LFFITA Trigger: CGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAGC...AACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGACGTGGGAAGCCTGCGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CAA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGAGACTCTCCAGGGTCTaGTTCTGCCAGCGCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGRLSRV*FCQRTS Trigger: GCTAGTGCGCTGGCAGAACAAGACCCTGGAGAGTCT...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGAGCTCCGGGGGTCCCGCTTCTaGGCCTCGGGGTCCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEVCHCAWHEFNPREPELRGSRF*ASGSLR Trigger: CCTGAGGGACCCCGAGGCCAAGAAGCGGGACCCCCG...GAGCTCGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCTTGCCACCCCCAACCGAATGCTTTCCCAGCGCTGAGGAGCTGTGGGGGGCTCTGCCCTTCTGGTaGCTGTTCTTCATCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTLPPPTECFPSAEELWGALPFW*LFFITA Trigger: CGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAGC...CCCCCACAGCTCCTCAGCGCTGGGAAAGCATTCGGTTGGGGGTGGCAAGGTCCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | GCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAGGCTGGGGGTTTGCCTTTCTCAGTTaGGTTCCCTCCCCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATRCSSPSPLPQPVPGWGFAFLS*VPSPTS Trigger: GGAGGTAGGGGAGGGAACCAAACTGAGAAAGGCAAA...CCCCCAGCCTGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCGCTGTCTTACTCCGCTaGCGTTTCCTGCCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEGARQVLLGDQMFISIPAVLLR*RFLPAR Trigger: CCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAGC...GGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCAGCCACGCGGCCGAACTGCAGCACTATATAGTCAGGGTCATCAGCGTGCTGTCTTACTCCGCTaGCGTTTCCTGCCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPQPRGRTAALYSQGHQRAVLLR*RFLPAR Trigger: CCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAGC...ACGCTGATGACCCTGACTATATAGTGCTGCAGTTCGGCCGCGTGGCTGAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129375.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCCATGCCTTTAATCACTGCACTGGGGAGGGAGTGGGATCTCTGTGGGTTCGCTGTCTTACTCCGCTaGCGTTTCCTGCCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAMPLITALGREWDLCGFAVLLR*RFLPAR Trigger: CCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAGC...GAACCCACAGAGATCCCACTCCCTCCCCAGTGCAGTGATTAAAGGCATGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CAA 90 bp | TCGGAGGGGCCTCGAACATCTGACTCCGGCTCTCTGACAGGAAGTGACTGGGGATGTGGGTTCTGCCCGTaGTCAAAGACCGTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SEGPRTSDSGSLTGSDWGCGFCP*SKTVKR Trigger: CCGCTTCACGGTCTTTGACAACGGGCAGAACCCACA...TCCCCAGTCACTTCCTGTCAGAGAGCCGGAGTCAGATGTTCGAGGCCCCTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCGCGATCCATGCCCTTCTaGTCCCGTGTCAGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPLSKTVKRFPKRLDQGSRSMPF*SRVSRQ Trigger: CTGCCGGCTGACACGGGACAAGAAGGGCATGGATCG...CGAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CAA 90 bp | GAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGATCCATGCCCTTCTaGTCCCGTGTCAGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EASTFGRPDVHLHPLCLSRSMPF*SRVSRQ Trigger: CTGCCGGCTGACACGGGACAAGAAGGGCATGGATCG...GCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCAGACTCTCCAGGGTCTaGTTCTGCCAGCGCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRGRGKYFWATRCSSPSRLSRV*FCQRTS Trigger: GCTAGTGCGCTGGCAGAACAAGACCCTGGAGAGTCT...GGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTTGGGCGGGTCGCTGTTaGGGGCGCAGCGGGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LQLYLFLGDSITSSSGWPWAGRC*GRSGGS Trigger: CGAGCCCCCGCTGCGCCCCAAACAGCGACCCGCCCA...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGGGGCGAGGCAAGTACTTTTGGGCGACCAGATGTTCATCTCCATCCCCGCTCTGCCCTTCTGGTaGCTGTTCTTCATCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: EEGARQVLLGDQMFISIPALPFW*LFFITA Trigger: CGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAGC...GGGGATGGAGATGAACATCTGGTCGCCCAAAAGTACTTGCCTCGCCCCCTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGTGTGCCACTGTGCCTGGCATGAATTCAATCCCAGAGAACCCGAGCTCGCTGTCTTACTCCGCTaGCGTTTCCTGCCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEVCHCAWHEFNPREPELAVLLR*RFLPAR Trigger: CCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAGC...GAGCTCGGGTTCTCTGGGATTGAATTCATGCCAGGCACAGTGGCACACTTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CAA 90 bp | TACTTTTGGGCGACCAGATGTTCATCTCCATCCCCTCTGCCTCAGCCGGTGCCAAGACTCTCCAGGGTCTaGTTCTGCCAGCGCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: YFWATRCSSPSPLPQPVPRLSRV*FCQRTS Trigger: GCTAGTGCGCTGGCAGAACAAGACCCTGGAGAGTCT...TGGCACCGGCTGAGGCAGAGGGGATGGAGATGAACATCTGGTCGCCCAAAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000148188.9 ENSMUST00000233420.2 ENSMUST00000233921.2 |
||
| CDS-3UTR CAA 90 bp | CCGTTGTCAAAGACCGTGAAGCGGTTCCCCAAGAGATTAGACCAGGGTTCGAAAGCTGTCTTACTCCGCTaGCGTTTCCTGCCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSKTVKRFPKRLDQGSKAVLLR*RFLPAR Trigger: CCTGGCCGGCAGGAAACGCAAGCGGAGTAAGACAGC...TTTCGAACCCTGGTCTAATCTCTTGGGGAACCGCTTCACGGTCTTTGACAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGTAGGTTGTCCTTGATGGTGCACACACAAACACACAAGGGGATGTATGCTCGATCCATGCCCTTCTaGTCCCGTGTCAGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCRLSLMVHTQTHKGMYARSMPF*SRVSRQ Trigger: CTGCCGGCTGACACGGGACAAGAAGGGCATGGATCG...AGCATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTCAGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTTGATGGTGCACTGTGGGTTCTGCCCGTaGTCAAAGACCGTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLRGKERANSCRLSLMVHCGFCP*SKTVKR Trigger: CCGCTTCACGGTCTTTGACAACGGGCAGAACCCACA...GTGCACCATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCTGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGTGCTCAGAGGGAAAGAGAGAGCTAACTCCTGTAGGTTGTCCTTGATGAGACTCTCCAGGGTCTaGTTCTGCCAGCGCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSVLRGKERANSCRLSLMRLSRV*FCQRTS Trigger: GCTAGTGCGCTGGCAGAACAAGACCCTGGAGAGTCT...CATCAAGGACAACCTACAGGAGTTAGCTCTCTCTTTCCCTCTGAGCACTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS GCA 90 bp | CCCTTTAGCTCTGCCCTTCTGGTTGCTGTTCTTCATCACTGCGGATaGAACCTCCTCTTCCACTTCTTCCTCCTCCTCCTTCTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFSSALLVAVLHHCG*NLLFHFFLLLLLLF Trigger: GAAGAGAAGAAGGAGGAGGAGGAAGAAGTGGAAGAGGAGGTTGCATCCGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAGCTAAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000233420.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGACGATCCATGCCCTTCTaGTCCCGTGTCAGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLYLFLGDSITSSSGWPGRSMPF*SRVSRQ Trigger: CTGCCGGCTGACACGGGACAAGAAGGGCATGGATCG...TCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CAA 90 bp | TATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAACACTCTCACGCTCTGCCCTTCTGGTaGCTGTTCTTCATCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: YFLETVLQVALAGLEHSHALPFW*LFFITA Trigger: CGCAGTGATGAAGAACAGCAACCAGAAGGGCAGAGC...GTGAGAGTGTTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGTGTGGGTTCTGCCCGTaGTCAAAGACCGTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSIYFLETVLQVALAGLCGFCP*SKTVKR Trigger: CCGCTTCACGGTCTTTGACAACGGGCAGAACCCACA...CAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGTAGGTTGTCCTTGATGGTGCACACACAAACACACAAGGGGATGTATGCTGTCCATCCAGTGGGGTaGGATTCAGGGTGGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SCRLSLMVHTQTHKGMYAVHPVG*DSGWFL Trigger: TAGAAACCACCCTGAATCCAACCCCACTGGATGGAC...AGCATACATCCCCTTGTGTGTTTGTGTGTGCACCATCAAGGACAACCTACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGCCCTGTTGAGTGGTaGAACAGGAAGCAAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQLYLFLGDSITSSSGWPGPVEW*NRKQGS Trigger: AGAGCCTTGCTTCCTGTTCAACCACTCAACAGGGCC...AGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTATTTATTTCTTGGAGACAGTATTACAAGTAGCTCTGGCTGGCCTGGAATTTGCCTTTCTCAGTTaGGTTCCCTCCCCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSIYFLETVLQVALAGLEFAFLS*VPSPTS Trigger: GGAGGTAGGGGAGGGAACCAAACTGAGAAAGGCAAA...TTCCAGGCCAGCCAGAGCTACTTGTAATACTGTCTCCAAGAAATAAATAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS GCA 72 bp | GTAGACTGTCTGCGCAGCGCGCGGCTCTGCCGAGTCTaGGGGCGGCTCCTCGTGCTTCCTGCGCCCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VDCLRSARLCRV*GRLLVLPAPSP Trigger: GGGGCTGGGCGCAGGAAGCACGAGGAGCCGCCCGCAGACTCGGCAGAGCCGCGCGCTGCGCAGACAGTCTAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 |
||
| CDS GCA 72 bp | CCGTGTCAGCCGGCAGCGGACTGCCCGGCCCTGGGGTaGTGGCTGCAGCACAAACTCCCGGGGTTCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCQPAADCPALG*WLQHKLPGFTH Trigger: GTGGGTGAACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCAGTCCGCTGCCGGCTGACACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000131604.3 ENSMUST00000233420.2 |
||
| CDS GCA 72 bp | AGCCGGCAGCGGACTGCCCGGCCCTGGGGTGCTGGCTaGAGCACAAACTCCCGGGGTTCACCCACTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRQRTARPWGAG*STNSRGSPTST Trigger: TGTGGAAGTGGGTGAACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCAGTCCGCTGCCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000131604.3 ENSMUST00000233420.2 |
||
| CDS CCA 72 bp | GGTCCCGCTTCTTGGCCTCGGGGTCCCTCAGGAACTTaGCGTAGACTGTCTGCGCAGCGCGCGGCTCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GPASWPRGPSGT*RRLSAQRAALP Trigger: CGGCAGAGCCGCGCGCTGCGCAGACAGTCTACGCCAAGTTCCTGAGGGACCCCGAGGCCAAGAAGCGGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 |
||
| CDS CCA 72 bp | TTGTCCCGTGTCAGCCGGCAGCGGACTGCCCGGCCCTaGGGTGCTGGCTGCAGCACAAACTCCCGGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSRVSRQRTARP*GAGCSTNSRGS Trigger: TGAACCCCGGGAGTTTGTGCTGCAGCCAGCACCCCAGGGCCGGGCAGTCCGCTGCCGGCTGACACGGGACAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000131604.3 ENSMUST00000233420.2 |
||
| CDS GCA 72 bp | TCTCTGGAGCACCCCGTGTGGGGGCGCTCTGCGCTCTaGCAGCCACAGAGGGACAGGAGTGCAGCTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SLEHPVWGRSAL*QPQRDRSAAAP Trigger: AGGTGCAGCTGCACTCCTGTCCCTCTGTGGCTGGCAGAGCGCAGAGCGCCCCCACACGGGGTGCTCCAGAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131604.3 |
||
| CDS GCA 72 bp | GCTCTGCCGAGTCTGCGGGCGGCTCCTCGTGCTTCCTaGGCCCAGCCCCAGCTTTACGGGGTTTGGATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALPSLRAAPRAS*AQPQLYGVWIP Trigger: TGGAATCCAAACCCCGTAAAGCTGGGGCTGGGCGCAGGAAGCACGAGGAGCCGCCCGCAGACTCGGCAGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 |
||
| CDS CCA 72 bp | CAGTCATACGGCGGGGTCCTCGGAAGCCTAAAACATTaGTTTCATAGACCACAGCGGCCAGCTCCTGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSYGGVLGSLKH*FHRPQRPAPGA Trigger: TGCGCCAGGAGCTGGCCGCTGTGGTCTATGAAACCAATGTTTTAGGCTTCCGAGGACCCCGCCGTATGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000123797.8 ENSMUST00000233420.2 |
||
| CDS CCA 72 bp | GAGGCACGTGCAGACTCAAGAGTCACTTGGCCAAGCTaGATCCCTGGCCCTGTTGAGTGGTTGAACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EARADSRVTWPS*IPGPVEWLNRK Trigger: CTTCCTGTTCAACCACTCAACAGGGCCAGGGATCCAGCTTGGCCAAGTGACTCTTGAGTCTGCACGTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS CCA 72 bp | GAGGAATCTGAGGCACGTGCAGACTCAAGAGTCACTTaGCCAAGCTGGATCCCTGGCCCTGTTGAGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: EESEARADSRVT*PSWIPGPVEWL Trigger: CAACCACTCAACAGGGCCAGGGATCCAGCTTGGCCAAGTGACTCTTGAGTCTGCACGTGCCTCAGATTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS CAA 90 bp | TTCTTTGCCTTTCTCAGTTTGGTTCCCTCCCCTACCTCCTTCTTCTaGGTTCGGAGCGGTTTCCGAGGGGCATCCGGGCTTCCTACATCC | + |
|
Preference number: 6 (lower is better) Translates to: FFAFLSLVPSPTSFF*VRSGFRGASGLPTS Trigger: GGATGTAGGAAGCCCGGATGCCCCTCGGAAACCGCTCCGAACCAAGAAGAAGGAGGTAGGGGAGGGAACCAAACTGAGAAAGGCAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041819.14 ENSMUST00000114794.2 ENSMUST00000233420.2 |
||
| CDS CAA 72 bp | AAGCTCACGTTTCGGGGCCGGATAGGGACCCTCTCGTaGTCCGAGTTCATTCCAGGAATGATGACAGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: KLTFRGRIGTLS*SEFIPGMMTVI Trigger: TATGACTGTCATCATTCCTGGAATGAACTCGGACAACGAGAGGGTCCCTATCCGGCCCCGAAACGTGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114794.2 |
||
| CDS CAA 72 bp | CTAGATTCCAGCATCCTTCCCTTCATCAAGGTACCATaGGGAATATCCCAGCACCTACCCAAGGGTCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LDSSILPFIKVP*GISQHLPKGRS Trigger: TGACCGACCCTTGGGTAGGTGCTGGGATATTCCCAATGGTACCTTGATGAAGGGAAGGATGCTGGAATCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123797.8 |
||