Pregenerated sensors for TUFT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005968Ensembl transcript IDs: ENSMUST00000006123.11, ENSMUST00000196496.2, ENSMUST00000196655.5, ENSMUST00000196733.5, ENSMUST00000200407.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCCATCTGCCAGCAAGCAGAGCCTGGGGCAAGAGCCCAGGACCTaGGGCTACCAGGGTAGTCAGGAAGTCAGTCAGTATCAACCGCCT | + |
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Preference number: 1 (lower is better) Translates to: DPSASKQSLGQEPRT*GYQGSQEVSQYQPP Trigger: AGGCGGTTGATACTGACTGACTTCCTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTTGCTGGCAGATGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR CCA 90 bp | TCCCAAACAGTCCCCACTGCCCTATTCCCCAGACAGCACACACTCTaGGACAGACATGAGCCTCCTGAGATACAGGTAGACTCTAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SQTVPTALFPRQHTL*DRHEPPEIQVDSRE Trigger: TTCCCTAGAGTCTACCTGTATCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAGTGGGGACTGTTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR CCA 90 bp | AGTAGCAGTTTTGCTGAGACTGACAGAGAAGACAGTTCTCAGTTCTaGGTTAGGGAGGCTAAGGTGTGCCTCTCAGGACACCGCAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SSSFAETDREDSSQF*VREAKVCLSGHRRG Trigger: TCCCCTGCGGTGTCCTGAGAGGCACACCTTAGCCTCCCTAACCCAGAACTGAGAACTGTCTTCTCTGTCAGTCTCAGCAAAACTGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR TCA 90 bp | CAAGGGTGGAGTCAAGCGGAAAACAAACAGTTTGTTGCTAAGAACTaGGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTC | + |
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Preference number: 1 (lower is better) Translates to: QGWSQAENKQFVAKN*AVFAEGTSLPQDTL Trigger: GAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTTCCGCTTGACTCCACCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR GCA 90 bp | ACACTCATGAGGCTACTAGACCACACTATAGCGAACACGATGAGCTaGAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: TLMRLLDHTIANTMS*RVIQGWDRGCYGWK Trigger: CTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTCTAGTAGCCTCATGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| 3UTR CCA 90 bp | GACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTaGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAA | + |
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Preference number: 1 (lower is better) Translates to: DHTIANTMSCRVIQG*DRGCYGWKCSERLE Trigger: TTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| 3UTR CCA 90 bp | ATGAGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTaGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: MSCRVIQGWDRGCYG*KCSERLEEPLFPPK Trigger: TTTGGGAGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR TCA 90 bp | TTAAAGTTGCCATACAAAGACTATGTCACAGACAGGAAAAGAATTTaGAGGGGCACGGAGATTATGTACAACCCACTCGTTCTGCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LKLPYKDYVTDRKRI*RGTEIMYNPLVLPE Trigger: TTCAGGCAGAACGAGTGGGTTGTACATAATCTCCGTGCCCCTTCAAATTCTTTTCCTGTCTGTGACATAGTCTTTGTATGGCAACTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAACGCTCCGGACCCATCTaGCAGCAAGCAGAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GCLEKALVSMAQGWSQAERSGPI*QQAEPG Trigger: CCCAGGCTCTGCTTGCTGGCAGATGGGTCCGGAGCG...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAAAGGTCTGCAGTGTCCTaGGGAGACAGGCGCTCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: GCLEKALVSMAQGWSQAERSAVS*GDRRSG Trigger: TCCGGAGCGCCTGTCTCCTCAGGACACTGCAGACCT...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | CTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATCGCTCCGGACCCATCTaGCAGCAAGCAGAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LVGQVPWLRPGLANYIPHRSGPI*QQAEPG Trigger: CCCAGGCTCTGCTTGCTGGCAGATGGGTCCGGAGCG...ATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAACCAGCAAGCAGAGCCTaGGGCAAGAGCCCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: GCLEKALVSMAQGWSQAEPASRA*GKSPGP Trigger: AGGTCCTGGGCTCTTGCCCCAGGCTCTGCTTGCTGG...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGCTATCTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTAAGGTCTGCAGTGTCCTaGGGAGACAGGCGCTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: ARLSSRPGSLAKTRPGQLRSAVS*GDRRSG Trigger: TCCGGAGCGCCTGTCTCCTCAGGACACTGCAGACCT...TAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAGATAGCCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR TCA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGTCTGCAGTGTCCTaGGGAGACAGGCGCTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTRSAVS*GDRRSG Trigger: TCCGGAGCGCCTGTCTCCTCAGGACACTGCAGACCT...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTCACTCAAGAGCCCAGGACCTaGGGCTACCAGGGTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LSCVCRRNVTPPGHAPVTQEPRT*GYQGSQ Trigger: CTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTG...AGTGACTGGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | CTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCCCAGCAAGCAGAGCCTaGGGCAAGAGCCCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: LRTELCLQKERHSPRTRSPASRA*GKSPGP Trigger: AGGTCCTGGGCTCTTGCCCCAGGCTCTGCTTGCTGG...GGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCTATTCCCCAGACAGCACACACTCTGGGACAGACATGAGCCTCCTGAGAGGAGGAGGGCTTCTCTaGAGGACTGAGGCAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LPYSPDSTHSGTDMSLLRGGGLL*RTEATA Trigger: TGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCC...TCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATTGGGAGGAGGGCTTCTCTaGAGGACTGAGGCAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: SRPGSLAKTRPGQLYPPLGGGLL*RTEATA Trigger: TGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCC...CAATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTGGGCAGCTAGATTCCAGTGCACACAGCAGGGAAGCTCTGTTATGTGGACCAGCAAGCAGAGCCTaGGGCAAGAGCCCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: AFGQLDSSAHSREALLCGPASRA*GKSPGP Trigger: AGGTCCTGGGCTCTTGCCCCAGGCTCTGCTTGCTGG...TCCACATAACAGAGCTTCCCTGCTGTGTGCACTGGAATCTAGCTGCCCAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTATTCCCCAGACAGCACACACTCTGGGACAGACATGAGCCTCCTGAGAGTCTGGAAAAGGCCCTaGTCAGCATGGCACAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LPYSPDSTHSGTDMSLLRVWKRP*SAWHKG Trigger: ACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGAC...TCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCCCAAACAGTCCCCACTGCCCTATTCCCCAGACAGCACACACTCTGGGAGTCTGGAAAAGGCCCTaGTCAGCATGGCACAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FLPNSPHCPIPQTAHTLGVWKRP*SAWHKG Trigger: ACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGAC...TCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAGTGGGGACTGTTTGGGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | CATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCTGTCTTCCCAAGGTCTaGAGTGTCCTGAGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: HWLSGKGPGQHGTRVESSCLPKV*SVLRRQ Trigger: CTGTCTCCTCAGGACACTGCAGACCTTGGGAAGACA...GCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATCAAGAGCCCAGGACCTaGGGCTACCAGGGTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDQEPRT*GYQGSQ Trigger: CTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTG...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGCGCTCCGGACCCATCTaGCAGCAAGCAGAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: FHELFIAPENLPTQNCSLRSGPI*QQAEPG Trigger: CCCAGGCTCTGCTTGCTGGCAGATGGGTCCGGAGCG...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATTGGAACTGAGCTGTGTTTaGAGAAGGAACGTCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: SRPGSLAKTRPGQLYPPLELSCV*RRNVTP Trigger: GGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTC...CAATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAAATTTTGTCACTTCTCTaGACTTACCAAGGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GCLEKALVSMAQGWSQAEILSLL*TYQGPG Trigger: GCCAGGCCCTTGGTAAGTCCAGAGAAGTGACAAAAT...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | TTGTTGCTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACAGGAGGAGGGCTTCTCTaGAGGACTGAGGCAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: LLLRTELCLQKERHSPRTGGGLL*RTEATA Trigger: TGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCC...TGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | TATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAATTTTGTCACTTCTCTaGACTTACCAAGGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: YPPLAVWKRPWSAWHKGGILSLL*TYQGPG Trigger: GCCAGGCCCTTGGTAAGTCCAGAGAAGTGACAAAAT...TCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | GAGAGATTAGAAGAACCTCTGTTTCCTCCCAAACAGTCCCCACTGCCCTATTCCCCCCCATTGGCTGTCTaGAAAAGGCCCTGGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: ERLEEPLFPPKQSPLPYSPPLAV*KRPWSA Trigger: TGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGG...GGAATAGGGCAGTGGGGACTGTTTGGGAGGAAACAGAGGTTCTTCTAATCTCTC 53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCCCAAACAGTCCCCACTGCCCTATTCCCCAGACAGCACACACTCTGGGAAACTATATCCCCCATTaGCTGTCTGGAAAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: FLPNSPHCPIPQTAHTLGNYIPH*LSGKGP Trigger: AGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTT...TCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAGTGGGGACTGTTTGGGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | GACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGAAGACAGCACACACTCTaGGACAGACATGAGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: DHTIANTMSCRVIQGWDRRQHTL*DRHEPP Trigger: AGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCT...TCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCATGTCTTCCCAAGGTCTaGAGTGTCCTGAGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSCLPKV*SVLRRQ Trigger: CTGTCTCCTCAGGACACTGCAGACCTTGGGAAGACA...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCTACTAGACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCCATGGGGAGTTAGTATaGCACTGTGAAACCAACGAG | + |
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Preference number: 2 (lower is better) Translates to: RLLDHTIANTMSCRVIQGHGELV*HCETNE Trigger: CTCGTTGGTTTCACAGTGTCATACTAACTCCCCATG...GCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTCTAGTAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTCACTGGGCTTCTAGCTTTTTaGGCTGAGACAAATTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: LSCVCRRNVTPPGHAPVTGLLAF*AETNFV Trigger: GACAAAATTTGTCTCAGCCCAAAAAGCTAGAAGCCC...AGTGACTGGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATAGACAGCACACACTCTaGGACAGACATGAGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDRQHTL*DRHEPP Trigger: AGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCT...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | CATGTCCAGGTAAACCTAAATACCTCGGCAGAAAGCTGCAGAACACTGGTACTAACGCTCCAGTCACTCTaGGCATCTGGGCTTCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: HVQVNLNTSAESCRTLVLTLQSL*ASGLLA Trigger: AGCTAGAAGCCCAGATGCGCAGAGTGACTGGAGCGT...TAGTACCAGTGTTCTGCAGCTTTCTGCCGAGGTATTTAGGTTTACCTGGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR GCA 90 bp | ATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGAACTGAGCTGTGTTTaGAGAAGGAACGTCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: IANTMSCRVIQGWDRGCYELSCV*RRNVTP Trigger: GGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTC...ATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | ACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGAATGGACACAAGGGCCTGGCTTTTaGGCAGCTAGATTCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TIHSPRESSYPKLQPEWTQGPGF*AARFQC Trigger: GCACTGGAATCTAGCTGCCCAAAAGCCAGGCCCTTG...TGTCCATTCAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGCAAGGGCCTGGCTTTTaGGCAGCTAGATTCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: FHELFIAPENLPTQNCSLQGPGF*AARFQC Trigger: GCACTGGAATCTAGCTGCCCAAAAGCCAGGCCCTTG...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAAACTATATCCCCCATTaGCTGTCTGGAAAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSNYIPH*LSGKGP Trigger: AGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTT...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATAGCATGGCACAAGGGTaGAGTCAAGCGGAAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: IANTMSCRVIQGWDRGCYSMAQG*SQAENK Trigger: TTTGTTTTCCGCTTGACTCCACCCTTGTGCCATGCT...ATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATAGCATGGCACAAGGGTaGAGTCAAGCGGAAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDSMAQG*SQAENK Trigger: TTTGTTTTCCGCTTGACTCCACCCTTGTGCCATGCT...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGATTAGAAGAACCTCTGTTTCCTCCCAAACAGTCCCCACTGCCCTATTCCAACTATATCCCCCATTaGCTGTCTGGAAAAGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ERLEEPLFPPKQSPLPYSNYIPH*LSGKGP Trigger: AGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTT...GGAATAGGGCAGTGGGGACTGTTTGGGAGGAAACAGAGGTTCTTCTAATCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCATTTGTTGCTAAGAACTaGGCTGTGTTTGCAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSFVAKN*AVFAEG Trigger: TCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAAA...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR GCA 90 bp | ATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATACCTCGGCAGAAAGCTaGAGAACACTGGTACTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: IANTMSCRVIQGWDRGCYTSAES*RTLVLN Trigger: ATTTAGTACCAGTGTTCTGCAGCTTTCTGCCGAGGT...ATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTCCCAAAACTGCAGCCTaGATGGACATTCCTGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RGCYGWKCSERLEEPLFPPKTAA*MDIPVS Trigger: GGACACAGGAATGTCCATTCAGGCTGCAGTTTTGGG...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTTGTCTTCCCAAGGTCTaGAGTGTCCTGAGGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: RGCYGWKCSERLEEPLFPCLPKV*SVLRRQ Trigger: CTGTCTCCTCAGGACACTGCAGACCTTGGGAAGACA...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTGAACTGAGCTGTGTTTaGAGAAGGAACGTCACTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RGCYGWKCSERLEEPLFPELSCV*RRNVTP Trigger: GGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTC...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAATTTGTTGCTAAGAACTaGGCTGTGTTTGCAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QGWDRGCYGWKCSERLEEFVAKN*AVFAEG Trigger: TCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAAA...TTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CCA 90 bp | CATGTCCAGGTAAACCTAAATACCTCGGCAGAAAGCTGCAGAACACTGGTACTAGGGCTTCTAGCTTTTTaGGCTGAGACAAATTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HVQVNLNTSAESCRTLVLGLLAF*AETNFV Trigger: GACAAAATTTGTCTCAGCCCAAAAAGCTAGAAGCCC...TAGTACCAGTGTTCTGCAGCTTTCTGCCGAGGTATTTAGGTTTACCTGGACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTAGCATGGCACAAGGGTaGAGTCAAGCGGAAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: RGCYGWKCSERLEEPLFPSMAQG*SQAENK Trigger: TTTGTTTTCCGCTTGACTCCACCCTTGTGCCATGCT...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTGGGCTTCTAGCTTTTTaGGCTGAGACAAATTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RGCYGWKCSERLEEPLFPGLLAF*AETNFV Trigger: GACAAAATTTGTCTCAGCCCAAAAAGCTAGAAGCCC...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | CAGGCGCTCCGGACCCATCTGCCAGCAAGCAGAGCCTaGGGCAAGAGCCCAGGACCTGCGGCTACCAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QALRTHLPASRA*GKSPGPAATRV Trigger: TACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTTGCTGGCAGATGGGTCCGGAGCGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR GCA 72 bp | GCCAGCAAGCAGAGCCTGGGGCAAGAGCCCAGGACCTaGGGCTACCAGGGTAGTCAGGAAGTCAGTCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ASKQSLGQEPRT*GYQGSQEVSQY Trigger: ATACTGACTGACTTCCTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTTGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR GCA 72 bp | TCGTTCCTGCTAGCAGGAGACTGTCTTCCCAAGGTCTaGAGTGTCCTGAGGAGACAGGCGCTCCGGACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SFLLAGDCLPKV*SVLRRQALRTH Trigger: ATGGGTCCGGAGCGCCTGTCTCCTCAGGACACTGCAGACCTTGGGAAGACAGTCTCCTGCTAGCAGGAACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR GCA 72 bp | TCAGTATCAACCGCCTACAAGGGAGGAGGGCTTCTCTaGAGGACTGAGGCAACTGCAACGGCAACGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SVSTAYKGGGLL*RTEATATATSI Trigger: GATGGACGTTGCCGTTGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCCCTTGTAGGCGGTTGATACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | GTCCCCACTGCCCTATTCCCCAGACAGCACACACTCTaGGACAGACATGAGCCTCCTGAGATACAGGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VPTALFPRQHTL*DRHEPPEIQVD Trigger: GTCTACCTGTATCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAGTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CAA 90 bp | TATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAAGAACTGAGCTGTGTTaGCAGAAGGAACGTCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: YPPLAVWKRPWSAWHKGGRTELC*QKERHS Trigger: GGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCT...TCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | TTGTCACTTCTCTGGACTTACCAAGGGCCTGGCTTTTaGGCAGCTAGATTCCAGTGCACACAGCAGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSLLWTYQGPGF*AARFQCTQQGS Trigger: GCTTCCCTGCTGTGTGCACTGGAATCTAGCTGCCCAAAAGCCAGGCCCTTGGTAAGTCCAGAGAAGTGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | CAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTaGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLYPPLAVWKRP*SAWHKGGVKRK Trigger: TTTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGGCTATCTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTAGGGCTGAGACAAATTTaGTCACTTCTCTGGACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ARLSSRPGSLAKTRPGQLGLRQI*SLLWTY Trigger: GTAAGTCCAGAGAAGTGACAAAATTTGTCTCAGCCC...TAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAGATAGCCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCTATTCCCCAGACAGCACACACTCTGGGACAGACATGAGCCTCCTGAGAGGGCTGAGACAAATTTaGTCACTTCTCTGGACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LPYSPDSTHSGTDMSLLRGLRQI*SLLWTY Trigger: GTAAGTCCAGAGAAGTGACAAAATTTGTCTCAGCCC...TCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR TCA 72 bp | AAGCAGCAGCTAGAGGGATGGCATGGGGAGTTAGTATaGCACTGTGAAACCAACGAGGCCAACCAGGATACT | + |
|
Preference number: 3 (lower is better) Translates to: KQQLEGWHGELV*HCETNEANQDT Trigger: AGTATCCTGGTTGGCCTCGTTGGTTTCACAGTGTCATACTAACTCCCCATGCCATCCCTCTAGCTGCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR GCA 72 bp | TACCAAGGGCCTGGCTTTTGGGCAGCTAGATTCCAGTaGACACAGCAGGGAAGCTCTGTTATGTGGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YQGPGFWAARFQ*TQQGSSVMWRK Trigger: TTTTCTCCACATAACAGAGCTTCCCTGCTGTGTGCACTGGAATCTAGCTGCCCAAAAGCCAGGCCCTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | TTTGCTGAGACTGACAGAGAAGACAGTTCTCAGTTCTaGGTTAGGGAGGCTAAGGTGTGCCTCTCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: FAETDREDSSQF*VREAKVCLSGH Trigger: GTGTCCTGAGAGGCACACCTTAGCCTCCCTAACCCAGAACTGAGAACTGTCTTCTCTGTCAGTCTCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | ATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTaGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IANTMSCRVIQG*DRGCYGWKCSE Trigger: CTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| 3UTR GCA 72 bp | AGGCTACTAGACCACACTATAGCGAACACGATGAGCTaGAGGGTCATTCAGGGCTGGGATAGAGGTTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: RLLDHTIANTMS*RVIQGWDRGCY Trigger: ATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTCTAGTAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | TGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTaGAGTCAAGCGGAAAACAAACAGTTTGTTGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLEKALVSMAQG*SQAENKQFVAK Trigger: CTTAGCAACAAACTGTTTGTTTTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATGGGCTGAGACAAATTTaGTCACTTCTCTGGACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDGLRQI*SLLWTY Trigger: GTAAGTCCAGAGAAGTGACAAAATTTGTCTCAGCCC...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGAGAACTGAGCTGTGTTaGCAGAAGGAACGTCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: FHELFIAPENLPTQNCSLRTELC*QKERHS Trigger: GGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCT...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR TCA 72 bp | AGTCAAGCGGAAAACAAACAGTTTGTTGCTAAGAACTaGGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SQAENKQFVAKN*AVFAEGTSLPQ Trigger: CTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTTCCGCTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR CCA 72 bp | AGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTaGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RVIQGWDRGCYG*KCSERLEEPLF Trigger: AAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTAAAACAAACAGTTTGTaGCTAAGAACTGAGCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGCYGWKCSERLEEPLFPKTNSL*LRTELC Trigger: ACACAGCTCAGTTCTTAGCAACAAACTGTTTGTTTT...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR CCA 90 bp | AAGCAGAGCCTGGGGCAAGAGCCCAGGACCTGCGGCTACCAGGGTAGTCAGGAAGCCTCCTGGATGTACTaGACCTCACTCTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQSLGQEPRTCGYQGSQEASWMY*TSLFSW Trigger: CCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGC...TTCCTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACATCTGGAGCGTCAGCCTaGGAATGTCCACGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTSGASA*ECPRCP Trigger: CGGGCAGCGTGGACATTCTCAGGCTGACGCTCCAGA...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006123.11 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAGCCTGGGGCAAGAGCCCAGGACCTGCGGCTACCAGGGTAGTCAGGAAGACAGTCAGCGTTCTTaGTCCGAAGCTCTTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQSLGQEPRTCGYQGSQEDSQRS*SEALLG Trigger: CCCTAGAAGAGCTTCGGATCAAGAACGCTGACTGTC...TTCCTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR CCA 90 bp | CAACCGCCTACAAGGGAGGAGGGCTTCTCTGCAGGACTGAGGCAACTGCAACGGGCCTCCTGGATGTACTaGACCTCACTCTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPPTREEGFSAGLRQLQRASWMY*TSLFSW Trigger: CCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGC...CCGTTGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCCCTTGTAGGCGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | CAACCGCCTACAAGGGAGGAGGGCTTCTCTGCAGGACTGAGGCAACTGCAACGGCCATCTCTCCTTCCCTaGCTTTCACCAGTAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPPTREEGFSAGLRQLQRPSLLP*LSPVRP Trigger: AGGCCTTACTGGTGAAAGTCAGGGAAGGAGAGATGG...CCGTTGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCCCTTGTAGGCGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTCACGGGGCTTCGATATCCTaGCACTGCCCAGGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TELCLQKERHSPRTRSSHGASIS*HCPGSL Trigger: CAGAGAACCTGGGCAGTGTCAGGATATCGAAGCCCC...GTGACTGGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTACTAGACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTCCTCCCGGAGCTTCTaGAGGCAGTTCCTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLDHTIANTMSCRVIQGSSRSF*RQFLAS Trigger: GGAGGCCAGGAACTGCCTGCAGAAGCTCCGGGAGGA...GCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTCTAGTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| CDS-3UTR CCA 90 bp | TACAAGGGAGGAGGGCTTCTCTGCAGGACTGAGGCAACTGCAACGGCAACGTCCACGCAGAGGGTCTCCTaGACTCCTGTCAAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKGGGLLCRTEATATATSTQRVS*TPVKLA Trigger: AGCAAGCTTGACAGGAGTCCAGGAGACCCTCTGCGT...GGACGTTGCCGTTGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCCCTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAACCATCTCTCCTTCCCTaGCTTTCACCAGTAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCLEKALVSMAQGWSQAEPSLLP*LSPVRP Trigger: AGGCCTTACTGGTGAAAGTCAGGGAAGGAGAGATGG...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | CTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATTGGCATAGGTCTTCCTaGCCGCCTTCTGGGCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVGQVPWLRPGLANYIPHWHRSS*PPSGLC Trigger: ACATAGCCCAGAAGGCGGGCAGGAAGACCTATGCCA...ATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006123.11 |
||
| CDS-3UTR GCA 90 bp | AAGCAGAGCCTGGGGCAAGAGCCCAGGACCTGCGGCTACCAGGGTAGTCAGGAAGACTCCTGTCAAGCTTaGTACTTATATCCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQSLGQEPRTCGYQGSQEDSCQA*YLYPPG Trigger: TCCGGGAGGATATAAGTAGCAAGCTTGACAGGAGTC...TTCCTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAAAGCTGCTCTATCATCTaGCGAACTTTCCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCLEKALVSMAQGWSQAESCSII*RTFRCW Trigger: CCAGCAGCGGAAAGTTCGGCAGATGATAGAGCAGCT...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAATGCTCCATGCGGTCGTaGATCTCTAAGTTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLEKALVSMAQGWSQAECSMRS*ISKFSA Trigger: GGCTGAGAACTTAGAGATGCACGACCGCATGGAGCA...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | CTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTGGCCAGGCATCATaGCATAGGTCTTCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRTELCLQKERHSPRTRSSGQAS*HRSSCP Trigger: CGGGCAGGAAGACCTATGCCATGATGCCTGGCCACT...GGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | AGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATTGTCTGCAGGCAGTTCCTaGCCTCCTGGATGTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRPGSLAKTRPGQLYPPLSAGSS*PPGCTG Trigger: TCCAGTACATCCAGGAGGCCAGGAACTGCCTGCAGA...CAATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | AAGCAGAGCCTGGGGCAAGAGCCCAGGACCTGCGGCTACCAGGGTAGTCAGGAAAGCATGTCATCCAAGTaGTGGATCTTCTCCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQSLGQEPRTCGYQGSQESMSSK*WIFSRN Trigger: GTTTCGGGAGAAGATCCACCACTTGGATGACATGCT...TTCCTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | CATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCCCATCTCTCCTTCCCTaGCTTTCACCAGTAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HWLSGKGPGQHGTRVESSPSLLP*LSPVRP Trigger: AGGCCTTACTGGTGAAAGTCAGGGAAGGAGAGATGG...GCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | TTGTTGCTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACATCCTCCCGGAGCTTCTaGAGGCAGTTCCTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRTELCLQKERHSPRTSSRSF*RQFLAS Trigger: GGAGGCCAGGAACTGCCTGCAGAAGCTCCGGGAGGA...TGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCCAAACAGTCCCCACTGCCCTATTCCCCAGACAGCACACACTCTGGGAAGCTGCTCTATCATCTaGCGAACTTTCCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSPHCPIPQTAHTLGSCSII*RTFRCW Trigger: CCAGCAGCGGAAAGTTCGGCAGATGATAGAGCAGCT...TCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAGTGGGGACTGTTTGGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | TACAAGGGAGGAGGGCTTCTCTGCAGGACTGAGGCAACTGCAACGGCAACGTCCTTCTCCTTGAGCTCTTaGATGGTGGCATCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKGGGLLCRTEATATATSFSLSS*MVASFD Trigger: GTCAAAGGATGCCACCATTCAAGAGCTCAAGGAGAA...GGACGTTGCCGTTGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCCCTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR CCA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACACCTGTCAGTTCACTCTaGAGCGTCAGCCTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTPVSSL*SVSLRM Trigger: CATTCTCAGGCTGACGCTCCAGAGTGAACTGACAGG...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006123.11 |
||
| CDS-3UTR CCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAAGTGGCCAGGCATCATaGCATAGGTCTTCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSSGQAS*HRSSCP Trigger: CGGGCAGGAAGACCTATGCCATGATGCCTGGCCACT...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAATCTTCATGGCCATCATaGGACTCCACCAGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCLEKALVSMAQGWSQAESSWPS*DSTSSE Trigger: TTCAGAACTGGTGGAGTCCCATGATGGCCATGAAGA...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | CTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTCACTTCTAGTACCACCTCCTaGATGTACTGGACCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCVCRRNVTPPGHAPVTSSTTS*MYWTSL Trigger: GAGTGAGGTCCAGTACATCCAGGAGGTGGTACTAGA...AGTGACTGGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196655.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAAAGAGTCATGGGACTCTaGCTAAAGCCATTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GCLEKALVSMAQGWSQAERVMGL*LKPFGF Trigger: AAAGCCAAATGGCTTTAGTCAGAGTCCCATGACTCT...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | AGGCTACTAGACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCGACAGTCAGCGTTCTTaGTCCGAAGCTCTTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLDHTIANTMSCRVIQGDSQRS*SEALLG Trigger: CCCTAGAAGAGCTTCGGATCAAGAACGCTGACTGTC...GCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTCTAGTAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAGCCTGGGGCAAGAGCCCAGGACCTGCGGCTACCAGGGTAGTCAGGAATTTTCTCTTTCTGTTTaGCAGTCAGCGTTCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KQSLGQEPRTCGYQGSQEFSLSV*QSAFLI Trigger: GATCAAGAACGCTGACTGTCAAACAGAAAGAGAAAA...TTCCTGACTACCCTGGTAGCCGCAGGTCCTGGGCTCTTGCCCCAGGCTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | GGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGAGTCAAGCGGAACTGGATCACAGCTTTTaGATTCTGGAGCTGCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GCLEKALVSMAQGWSQAELDHSF*ILELLY Trigger: ATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAG...TTCCGCTTGACTCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCCAAACAGTCCCCACTGCCCTATTCCCCAGACAGCACACACTCTGGGATTCTCCTTGAGCTCTTaGATGGTGGCATCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSPHCPIPQTAHTLGFSLSS*MVASFD Trigger: GTCAAAGGATGCCACCATTCAAGAGCTCAAGGAGAA...TCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAGTGGGGACTGTTTGGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | TTGTTGCTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACAGGGGCTTCGATATCCTaGCACTGCCCAGGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRTELCLQKERHSPRTGASIS*HCPGSL Trigger: CAGAGAACCTGGGCAGTGTCAGGATATCGAAGCCCC...TGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATGGGGCTTCGATATCCTaGCACTGCCCAGGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDGASIS*HCPGSL Trigger: CAGAGAACCTGGGCAGTGTCAGGATATCGAAGCCCC...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | TCACTCTTCAGCTGGTCGATGTTCTTCTCATGGGTCATCTTGTCCCCAGACCTCTCTTCCTGCCCGCCTTaGTACCTTCTGGGCTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFSWSMFFSWVILSPDLSSCPP*YLLGYV Trigger: CACATAGCCCAGAAGGTATCAAGGCGGGCAGGAAGA...GAGGTCTGGGGACAAGATGACCCATGAGAAGAACATCGACCAGCTGAAGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196496.2 |
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| CDS-3UTR GCA 90 bp | AGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATTGTGCTTCTCTATTAGATaGTCCATGCGGTCGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRPGSLAKTRPGQLYPPLCFSIR*SMRSCI Trigger: GATGCACGACCGCATGGAGCATCTAATAGAGAAGCA...CAATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | ACTCTTCAGCTGGTCGATGTTCTTCTCATGGGTCATCTTGTCCCCAGACCTCCCCCTGTCAGTTCACTCTaGAGCGTCAGCCTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: TLQLVDVLLMGHLVPRPPPVSSL*SVSLRM Trigger: CATTCTCAGGCTGACGCTCCAGAGTGAACTGACAGG...GGGAGGTCTGGGGACAAGATGACCCATGAGAAGAACATCGACCAGCTGAAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196496.2 |
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| CDS-3UTR CCA 90 bp | TACAAGGGAGGAGGGCTTCTCTGCAGGACTGAGGCAACTGCAACGGCAACGTCCTTAATGATCTCTTCATaGCCATCATGGGACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YKGGGLLCRTEATATATSLMISS*PSWDST Trigger: GGTGGAGTCCCATGATGGCCATGAAGAGATCATTAA...GGACGTTGCCGTTGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCCCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | CTGCCCTATTCCCCAGACAGCACACACTCTGGGACAGACATGAGCCTCCTGAGAAGCATGTCATCCAAGTaGTGGATCTTCTCCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPYSPDSTHSGTDMSLLRSMSSK*WIFSRN Trigger: GTTTCGGGAGAAGATCCACCACTTGGATGACATGCT...TCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GCAAGGCTATCTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTAGTGCTGAAGTTTCCGTaGCTGACCTGCTTCTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: ARLSSRPGSLAKTRPGQLVLKFP*LTCFSI Trigger: AATAGAGAAGCAGGTCAGCCACGGAAACTTCAGCAC...TAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAGATAGCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | GGTCATCTTGTCCCCAGACCTCCCTTTCAAGTAAACCTTAATGATCTCTTCATGTCTGGAGCGTCAGCCTaGGAATGTCCACGCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GHLVPRPPFQVNLNDLFMSGASA*ECPRCP Trigger: CGGGCAGCGTGGACATTCTCAGGCTGACGCTCCAGA...CATGAAGAGATCATTAAGGTTTACTTGAAAGGGAGGTCTGGGGACAAGATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196496.2 |
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| CDS-3UTR TCA 90 bp | GCAAGGCTATCTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTAAGGCAATTTTCTCCTTaGGCTCTTGAATGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARLSSRPGSLAKTRPGQLRQFSP*ALEWWH Trigger: ATGCCACCATTCAAGAGCTCAAGGAGAAAATTGCCT...TAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAGATAGCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | TTCCTCCCAAACAGTCCCCACTGCCCTATTCCCCAGACAGCACACACTCTGGGATTGACAAGCAACTCCTaGACAGTCTTCTTCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPNSPHCPIPQTAHTLGLTSNS*TVFFKL Trigger: GAGCTTGAAGAAGACTGTGCAGGAGTTGCTTGTCAA...TCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAGTGGGGACTGTTTGGGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | TATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGGTGGATTGACAAGCAACTCCTaGACAGTCTTCTTCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPPLAVWKRPWSAWHKGGLTSNS*TVFFKL Trigger: GAGCTTGAAGAAGACTGTGCAGGAGTTGCTTGTCAA...TCCACCCTTGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | CTGCCCTATTCCCCAGACAGCACACACTCTGGGACAGACATGAGCCTCCTGAGATTAATGATCTCTTCATaGCCATCATGGGACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPYSPDSTHSGTDMSLLRLMISS*PSWDST Trigger: GGTGGAGTCCCATGATGGCCATGAAGAGATCATTAA...TCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | TTGTTGCTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACAACGCAGAGGGTCTCCTaGACTCCTGTCAAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRTELCLQKERHSPRTTQRVS*TPVKLA Trigger: AGCAAGCTTGACAGGAGTCCAGGAGACCCTCTGCGT...TGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GCTTTTGGGCAGCTAGATTCCAGTGCACACAGCAGGGAAGCTCTGTTATGTGGACGAACTTTCCGCTGCTaGCTCTTCAGCATGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AFGQLDSSAHSREALLCGRTFRC*LFSMSS Trigger: GGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCG...TCCACATAACAGAGCTTCCCTGCTGTGTGCACTGGAATCTAGCTGCCCAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | TGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCGTGCTGAAGTTTCCGTaGCTGACCTGCTTCTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: WLRPGLANYIPHWLSGKGVLKFP*LTCFSI Trigger: AATAGAGAAGCAGGTCAGCCACGGAAACTTCAGCAC...GCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATCTGTCCTCCTCTCTCTaGAGGGCCACATTACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDLSSSL*RATLLC Trigger: ACAGAGTAATGTGGCCCTTCAGAGAGAGGAGGACAG...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGATTAGAAGAACCTCTGTTTCCTCCCAAACAGTCCCCACTGCCCTATTCCCTGTCCTCCTCTCTCTaGAGGGCCACATTACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERLEEPLFPPKQSPLPYSLSSSL*RATLLC Trigger: ACAGAGTAATGTGGCCCTTCAGAGAGAGGAGGACAG...GGAATAGGGCAGTGGGGACTGTTTGGGAGGAAACAGAGGTTCTTCTAATCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | TTGTTGCTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACAGACAGTCAGCGTTCTTaGTCCGAAGCTCTTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRTELCLQKERHSPRTDSQRS*SEALLG Trigger: CCCTAGAAGAGCTTCGGATCAAGAACGCTGACTGTC...TGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR TCA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAAGGCAATTTTCTCCTTaGGCTCTTGAATGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTRQFSP*ALEWWH Trigger: ATGCCACCATTCAAGAGCTCAAGGAGAAAATTGCCT...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | CTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCTTGACAAGCAACTCCTaGACAGTCTTCTTCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTELCLQKERHSPRTRSLTSNS*TVFFKL Trigger: GAGCTTGAAGAAGACTGTGCAGGAGTTGCTTGTCAA...GGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATAGCTGCTCTATCATCTaGCGAACTTTCCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDSCSII*RTFRCW Trigger: CCAGCAGCGGAAAGTTCGGCAGATGATAGAGCAGCT...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTCACTTTTGAATTCTGGAGCTaGTCTATCATCTGCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSCVCRRNVTPPGHAPVTFEFWS*SIICRT Trigger: AGTTCGGCAGATGATAGAGCAGCTCCAGAATTCAAA...AGTGACTGGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGATTAGAAGAACCTCTGTTTCCTCCCAAACAGTCCCCACTGCCCTATTCCTGCTCCATGCGGTCGTaGATCTCTAAGTTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLEEPLFPPKQSPLPYSCSMRS*ISKFSA Trigger: GGCTGAGAACTTAGAGATGCACGACCGCATGGAGCA...GGAATAGGGCAGTGGGGACTGTTTGGGAGGAAACAGAGGTTCTTCTAATCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
||
| CDS-3UTR CCA 90 bp | GACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGATCTTCATGGCCATCATaGGACTCCACCAGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DHTIANTMSCRVIQGWDRSSWPS*DSTSSE Trigger: TTCAGAACTGGTGGAGTCCCATGATGGCCATGAAGA...TCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGATCGATGTTCTTCTCATaGGTCATCTTGTCCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DHTIANTMSCRVIQGWDRSMFFS*VILSPD Trigger: GTCTGGGGACAAGATGACCCATGAGAAGAACATCGA...TCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | CTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTCACTACAGCTTTTGAATTCTaGAGCTGCTCTATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSCVCRRNVTPPGHAPVTTAFEF*SCSIIC Trigger: GCAGATGATAGAGCAGCTCCAGAATTCAAAAGCTGT...AGTGACTGGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GCAAGGCTATCTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTAGTGGCATCCTTTGACTaGATCACAGCTTTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ARLSSRPGSLAKTRPGQLVASFD*ITAFEF Trigger: GAATTCAAAAGCTGTGATCCAGTCAAAGGATGCCAC...TAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAGATAGCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GAGAGATTAGAAGAACCTCTGTTTCCTCCCAAACAGTCCCCACTGCCCTATTCCACCTCCTGGATGTACTaGACCTCACTCTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERLEEPLFPPKQSPLPYSTSWMY*TSLFSW Trigger: CCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGT...GGAATAGGGCAGTGGGGACTGTTTGGGAGGAAACAGAGGTTCTTCTAATCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196655.5 |
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| CDS-3UTR TCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGAGCCAGAGAATGACCTaGGGAGTGGCCAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FHELFIAPENLPTQNCSLSQRMT*GVARHH Trigger: ATGATGCCTGGCCACTCCTCAGGTCATTCTCTGGCT...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | AGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTATATCCCCCATTGTTTTCTCTTTCTGTTTaGCAGTCAGCGTTCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRPGSLAKTRPGQLYPPLFSLSV*QSAFLI Trigger: GATCAAGAACGCTGACTGTCAAACAGAAAGAGAAAA...CAATGGGGGATATAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | GACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGACTGGATCACAGCTTTTaGATTCTGGAGCTGCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DHTIANTMSCRVIQGWDRLDHSF*ILELLY Trigger: ATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAG...TCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATGCCTTCTGGGCTATGTaGTCAAGTTCATCTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDAFWAM*SSSSPV Trigger: GACAGGAGATGAACTTGAGCACATAGCCCAGAAGGC...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006123.11 |
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| CDS-3UTR CCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCATCGATGTTCTTCTCATaGGTCATCTTGTCCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSSMFFS*VILSPD Trigger: GTCTGGGGACAAGATGACCCATGAGAAGAACATCGA...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACAGTTCCTGGCCTCCTaGATGTACTGGACCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QGWDRGCYGWKCSERLEEQFLAS*MYWTSL Trigger: GAGTGAGGTCCAGTACATCCAGGAGGCCAGGAACTG...TTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGTCTGCAGGCAGTTCCTaGCCTCCTGGATGTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHELFIAPENLPTQNCSLSAGSS*PPGCTG Trigger: TCCAGTACATCCAGGAGGCCAGGAACTGCCTGCAGA...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GCTTTTGGGCAGCTAGATTCCAGTGCACACAGCAGGGAAGCTCTGTTATGTGGAAGCATGTCATCCAAGTaGTGGATCTTCTCCCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFGQLDSSAHSREALLCGSMSSK*WIFSRN Trigger: GTTTCGGGAGAAGATCCACCACTTGGATGACATGCT...TCCACATAACAGAGCTTCCCTGCTGTGTGCACTGGAATCTAGCTGCCCAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAACAGCTTTTGAATTCTaGAGCTGCTCTATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTTAFEF*SCSIIC Trigger: GCAGATGATAGAGCAGCTCCAGAATTCAAAAGCTGT...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | CTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCGTGGCATCCTTTGACTaGATCACAGCTTTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTELCLQKERHSPRTRSVASFD*ITAFEF Trigger: GAATTCAAAAGCTGTGATCCAGTCAAAGGATGCCAC...GGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGTGCTGAAGTTTCCGTaGCTGACCTGCTTCTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSVLKFP*LTCFSI Trigger: AATAGAGAAGCAGGTCAGCCACGGAAACTTCAGCAC...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | ACCTCACTCTTCAGCTGGTCGATGTTCTTCTCATGGGTCATCTTGTCCCCAGACCGCCTTGATACCTTCTaGGCTATGTGCTCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLFSWSMFFSWVILSPDRLDTF*AMCSSS Trigger: TGAACTTGAGCACATAGCCCAGAAGGTATCAAGGCG...GTCTGGGGACAAGATGACCCATGAGAAGAACATCGACCAGCTGAAGAGTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196496.2 |
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| CDS-3UTR TCA 90 bp | GTGCACACAGCAGGGAAGCTCTGTTATGTGGAGAAAACACTAACTGAGAATAAGAGCCAGAGAATGACCTaGGGAGTGGCCAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHTAGKLCYVEKTLTENKSQRMT*GVARHH Trigger: ATGATGCCTGGCCACTCCTCAGGTCATTCTCTGGCT...CTTATTCTCAGTTAGTGTTTTCTCCACATAACAGAGCTTCCCTGCTGTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | GGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTTCTCCTTGAGCTCTTaGATGGTGGCATCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSFRAGIEVVMGGSVQRDFSLSS*MVASFD Trigger: GTCAAAGGATGCCACCATTCAAGAGCTCAAGGAGAA...ATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAAGGCAATTTTCTCCTTaGGCTCTTGAATGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSRQFSP*ALEWWH Trigger: ATGCCACCATTCAAGAGCTCAAGGAGAAAATTGCCT...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | TTGTTGCTAAGAACTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACATCTTCATGGCCATCATaGGACTCCACCAGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLRTELCLQKERHSPRTSSWPS*DSTSSE Trigger: TTCAGAACTGGTGGAGTCCCATGATGGCCATGAAGA...TGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAGTTCTTAGCAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | ACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGAATGGACACGAACTTTCCGCTGCTaGCTCTTCAGCATGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TIHSPRESSYPKLQPEWTRTFRC*LFSMSS Trigger: GGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCG...TGTCCATTCAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGCGAACTTTCCGCTGCTaGCTCTTCAGCATGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FHELFIAPENLPTQNCSLRTFRC*LFSMSS Trigger: GGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCG...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTAGCCAGAGAATGACCTaGGGAGTGGCCAGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGCYGWKCSERLEEPLFPSQRMT*GVARHH Trigger: ATGATGCCTGGCCACTCCTCAGGTCATTCTCTGGCT...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | ATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATCTGGATCACAGCTTTTaGATTCTGGAGCTGCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IANTMSCRVIQGWDRGCYLDHSF*ILELLY Trigger: ATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAG...ATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGGGTCATTCAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCATTTGAATTCTGGAGCTaGTCTATCATCTGCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SCRVIQGWDRGCYGWKCSFEFWS*SIICRT Trigger: AGTTCGGCAGATGATAGAGCAGCTCCAGAATTCAAA...TGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTGAATGACCCTGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTCAGTTCCTGGCCTCCTaGATGTACTGGACCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RGCYGWKCSERLEEPLFPQFLAS*MYWTSL Trigger: GAGTGAGGTCCAGTACATCCAGGAGGCCAGGAACTG...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTTTCCTGCCCGCCTTCTaGGCTATGTGCTCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGCYGWKCSERLEEPLFPFLPAF*AMCSSS Trigger: TGAACTTGAGCACATAGCCCAGAAGGCGGGCAGGAA...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006123.11 |
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| CDS-3UTR TCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGAGAGTCATGGGACTCTaGCTAAAGCCATTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHELFIAPENLPTQNCSLRVMGL*LKPFGF Trigger: AAAGCCAAATGGCTTTAGTCAGAGTCCCATGACTCT...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGGATAGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACTATTAGATGCTCCATaGGGTCGTGCATCTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGWDRGCYGWKCSERLEELLDAP*GRASLS Trigger: ACTTAGAGATGCACGACCGCATGGAGCATCTAATAG...TTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCTATCCCAGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGCTATTAGATGCTCCATaGGGTCGTGCATCTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FHELFIAPENLPTQNCSLLLDAP*GRASLS Trigger: ACTTAGAGATGCACGACCGCATGGAGCATCTAATAG...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | AGACCTCCCTTTCAAGTAAACCTTAATGATCTCTTCATGGCCATCATGGGACTCACCTTCTGGGCTATGTaGTCAAGTTCATCTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPPFQVNLNDLFMAIMGLTFWAM*SSSSPV Trigger: GACAGGAGATGAACTTGAGCACATAGCCCAGAAGGT...GAGTCCCATGATGGCCATGAAGAGATCATTAAGGTTTACTTGAAAGGGAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196496.2 |
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| CDS-3UTR TCA 90 bp | GAGAAAACACTAACTGAGAATAAGGGTATTGCTTCGTTCCTGCTAGCAGGAGACAGAGTCATGGGACTCTaGCTAAAGCCATTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKTLTENKGIASFLLAGDRVMGL*LKPFGF Trigger: AAAGCCAAATGGCTTTAGTCAGAGTCCCATGACTCT...GTCTCCTGCTAGCAGGAACGAAGCAATACCCTTATTCTCAGTTAGTGTTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GTGCACACAGCAGGGAAGCTCTGTTATGTGGAGAAAACACTAACTGAGAATAAGTTAATGATCTCTTCATaGCCATCATGGGACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VHTAGKLCYVEKTLTENKLMISS*PSWDST Trigger: GGTGGAGTCCCATGATGGCCATGAAGAGATCATTAA...CTTATTCTCAGTTAGTGTTTTCTCCACATAACAGAGCTTCCCTGCTGTGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGGTGGCATCCTTTGACTaGATCACAGCTTTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FHELFIAPENLPTQNCSLVASFD*ITAFEF Trigger: GAATTCAAAAGCTGTGATCCAGTCAAAGGATGCCAC...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR TCA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGTTTTCTCTTTCTGTTTaGCAGTCAGCGTTCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FHELFIAPENLPTQNCSLFSLSV*QSAFLI Trigger: GATCAAGAACGCTGACTGTCAAACAGAAAGAGAAAA...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | GTGCACACAGCAGGGAAGCTCTGTTATGTGGAGAAAACACTAACTGAGAATAAGTTTGAATTCTGGAGCTaGTCTATCATCTGCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VHTAGKLCYVEKTLTENKFEFWS*SIICRT Trigger: AGTTCGGCAGATGATAGAGCAGCTCCAGAATTCAAA...CTTATTCTCAGTTAGTGTTTTCTCCACATAACAGAGCTTCCCTGCTGTGTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR GCA 90 bp | AGAGGTTGTTATGGGTGGAAGTGTTCAGAGAGATTAGAAGAACCTCTGTTTCCTCTATTAGATGCTCCATaGGGTCGTGCATCTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGCYGWKCSERLEEPLFPLLDAP*GRASLS Trigger: ACTTAGAGATGCACGACCGCATGGAGCATCTAATAG...AGGAAACAGAGGTTCTTCTAATCTCTCTGAACACTTCCACCCATAACAACCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CCA 90 bp | GAGAAAACACTAACTGAGAATAAGGGTATTGCTTCGTTCCTGCTAGCAGGAGACACAGCTTTTGAATTCTaGAGCTGCTCTATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKTLTENKGIASFLLAGDTAFEF*SCSIIC Trigger: GCAGATGATAGAGCAGCTCCAGAATTCAAAAGCTGT...GTCTCCTGCTAGCAGGAACGAAGCAATACCCTTATTCTCAGTTAGTGTTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 90 bp | CCAGTTCTGAAGCCAGAGAATGACCTGAGGAGTGGCCAGGCATCATaGCATAGGTCTTCCTGCCCGCCGCGGTCTGGCTCTCCGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVLKPENDLRSGQAS*HRSSCPPRSGSPGA Trigger: TGCACCCGGAGAGCCAGACCGCGGCGGGCAGGAAGACCTATGCCATGATGCCTGGCCACTCCTCAGGTCATTCTCTGGCTTCAGAACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS TCA 90 bp | TGTGCTCAAGTTCATCTCCTGTCAGTTCACTCTGGAGCGTCAGCCTaGGAATGTCCACGCTGCCCGCGGTCTGGCTCTCCGGGTGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: CAQVHLLSVHSGASA*ECPRCPRSGSPGAR Trigger: ACGTGCACCCGGAGAGCCAGACCGCGGGCAGCGTGGACATTCTCAGGCTGACGCTCCAGAGTGAACTGACAGGAGATGAACTTGAGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196496.2 |
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| CDS-3UTR CAA 90 bp | GCAAGGCTATCTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTACCCAGGTTCTCTGTCTaGGCACGGGCCTGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARLSSRPGSLAKTRPGQLPRFSV*ARACVL Trigger: CAGCACACAGGCCCGTGCCAAGACAGAGAACCTGGG...TAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAGATAGCCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 90 bp | GCCTTCTGGGCTATGTGCTCAAGTTCATCTCCTGTCAGTTCACTCTaGAGCGTCAGCCTGAGAATGTCCACGCTGCCCGCGGTCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AFWAMCSSSSPVSSL*SVSLRMSTLPAVWL Trigger: GAGCCAGACCGCGGGCAGCGTGGACATTCTCAGGCTGACGCTCCAGAGTGAACTGACAGGAGATGAACTTGAGCACATAGCCCAGAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006123.11 |
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| CDS-3UTR CAA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACACCCAGGTTCTCTGTCTaGGCACGGGCCTGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTPRFSV*ARACVL Trigger: CAGCACACAGGCCCGTGCCAAGACAGAGAACCTGGG...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 90 bp | ACCTTCTGGGCTATGTGCTCAAGTTCATCTCCTGTCAGTTCACTCTaGAGCGTCAGCCTGAGAATGTCCACGCTGCCCGCGGTCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TFWAMCSSSSPVSSL*SVSLRMSTLPAVWL Trigger: GAGCCAGACCGCGGGCAGCGTGGACATTCTCAGGCTGACGCTCCAGAGTGAACTGACAGGAGATGAACTTGAGCACATAGCCCAGAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196496.2 |
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| CDS GCA 90 bp | GTATCTCCTGCTGACGCAGAGGGTCTCCTGGACTCCTGTCAAGCTTaGTACTTATATCCTCCCGGAGCTTCTGCAGGCAGTTCCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSPADAEGLLDSCQA*YLYPPGASAGSSWP Trigger: AGGCCAGGAACTGCCTGCAGAAGCTCCGGGAGGATATAAGTAGCAAGCTTGACAGGAGTCCAGGAGACCCTCTGCGTCAGCAGGAGATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS CCA 90 bp | CCCAGGTTCTCTGTCTTGGCACGGGCCTGTGTGCTGAAGTTTCCGTaGCTGACCTGCTTCTCTATTAGATGCTCCATGCGGTCGTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PRFSVLARACVLKFP*LTCFSIRCSMRSCI Trigger: GATGCACGACCGCATGGAGCATCTAATAGAGAAGCAGGTCAGCCACGGAAACTTCAGCACACAGGCCCGTGCCAAGACAGAGAACCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS GCA 90 bp | GACTGGTGTCGCCGCTCAGCCTCCCGCAGCTTGACAAGCAACTCCTaGACAGTCTTCTTCAAGCTCTCAACATCTTCACTCATGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DWCRRSASRSLTSNS*TVFFKLSTSSLMLG Trigger: CCCTAGCATGAGTGAAGATGTTGAGAGCTTGAAGAAGACTGTGCAGGAGTTGCTTGTCAAGCTGCGGGAGGCTGAGCGGCGACACCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS CCA 90 bp | CCAGTTCTGAAGCCAGAGAATGACCTGAGGAGTGGCCAGGCATCATaGCATAGGTCTTCCTGCCCGCCTTCTGGGCTATGTGCTCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVLKPENDLRSGQAS*HRSSCPPSGLCAQV Trigger: AACTTGAGCACATAGCCCAGAAGGCGGGCAGGAAGACCTATGCCATGATGCCTGGCCACTCCTCAGGTCATTCTCTGGCTTCAGAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006123.11 |
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| CDS CCA 90 bp | AGGCAGTTCCTGGCCTCCTGGATGTACTGGACCTCACTCTTCAGCTaGTCGATGTTCTTCTCATGGGTCATCTTGTCCCCAGACCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQFLASWMYWTSLFS*SMFFSWVILSPDLP Trigger: AGGGAGGTCTGGGGACAAGATGACCCATGAGAAGAACATCGACCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGCCAGGAACTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCTATTCCCCAGACAGCACACACTCTGGGACAGACATGAGCCTCCTGAGAGGACTCCTGTCAAGCTaGCTACTTATATCCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPYSPDSTHSGTDMSLLRGLLSS*LLISSR Trigger: CCGGGAGGATATAAGTAGCAAGCTTGACAGGAGTCC...TCTCAGGAGGCTCATGTCTGTCCCAGAGTGTGTGCTGTCTGGGGAATAGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS GCA 90 bp | CTCCACTCTGTCCTCCTCTCTCTGAAGGGCCACATTACTCTGTTCTaGTTCTCGCTGATAACGGCTGAGTGTGACCTCAAAGGCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: LHSVLLSLKGHITLF*FSLITAECDLKGHT Trigger: CGTGTGGCCTTTGAGGTCACACTCAGCCGTTATCAGCGAGAAGCAGAACAGAGTAATGTGGCCCTTCAGAGAGAGGAGGACAGAGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS-3UTR CAA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACATTCTCATGGGTCATCTaGTCCCCAGACCTCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTFSWVI*SPDLPF Trigger: GAAAGGGAGGTCTGGGGACAAGATGACCCATGAGAA...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CAA 90 bp | CAACCGCCTACAAGGGAGGAGGGCTTCTCTGCAGGACTGAGGCAACTGCAACGGACTGGATCACAGCTTTaGAATTCTGGAGCTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QPPTREEGFSAGLRQLQRTGSQL*NSGAAL Trigger: TAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAGT...CCGTTGCAGTTGCCTCAGTCCTGCAGAGAAGCCCTCCTCCCTTGTAGGCGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS GCA 90 bp | TCTGTCTTGGCACGGGCCTGTGTGCTGAAGTTTCCGTGGCTGACCTaGTTCTCTATTAGATGCTCCATGCGGTCGTGCATCTCTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLARACVLKFPWLT*FSIRCSMRSCISKF Trigger: GAACTTAGAGATGCACGACCGCATGGAGCATCTAATAGAGAAGCAGGTCAGCCACGGAAACTTCAGCACACAGGCCCGTGCCAAGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 90 bp | TGCCGAACTTTCCGCTGCTGGCTCTTCAGCATGTCATCCAAGTGGTaGATCTTCTCCCGAAACCCAGCCACTTCCTTTTCTAGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRTFRCWLFSMSSKW*IFSRNPATSFSRAA Trigger: TGCTGCTCTAGAAAAGGAAGTGGCTGGGTTTCGGGAGAAGATCCACCACTTGGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CAA 90 bp | AGGCTACTAGACCACACTATAGCGAACACGATGAGCTGCAGGGTCATTCAGGGCTTCTCATGGGTCATCTaGTCCCCAGACCTCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLDHTIANTMSCRVIQGFSWVI*SPDLPF Trigger: GAAAGGGAGGTCTGGGGACAAGATGACCCATGAGAA...GCCCTGAATGACCCTGCAGCTCATCGTGTTCGCTATAGTGTGGTCTAGTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS-3UTR CAA 90 bp | GCAAGGCTATCTAGTAGGCCAGGTTCCCTGGCTAAGACCAGGCCTGGCCAACTAGAATGGTGGCATCCTTaGACTGGATCACAGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARLSSRPGSLAKTRPGQLEWWHP*TGSQLL Trigger: CAAAAGCTGTGATCCAGTCAAAGGATGCCACCATTC...TAGTTGGCCAGGCCTGGTCTTAGCCAGGGAACCTGGCCTACTAGATAGCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CAA 90 bp | CTGAGCTGTGTTTGCAGAAGGAACGTCACTCCCCCAGGACACGCTCCAGTCACTGAATGGTGGCATCCTTaGACTGGATCACAGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSCVCRRNVTPPGHAPVTEWWHP*TGSQLL Trigger: CAAAAGCTGTGATCCAGTCAAAGGATGCCACCATTC...AGTGACTGGAGCGTGTCCTGGGGGAGTGACGTTCCTTCTGCAAACACAGCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CAA 90 bp | ACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGAATGGACACCCAGGTTCTCTGTCTaGGCACGGGCCTGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TIHSPRESSYPKLQPEWTPRFSV*ARACVL Trigger: CAGCACACAGGCCCGTGCCAAGACAGAGAACCTGGG...TGTCCATTCAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 90 bp | ATCTGCCGAACTTTCCGCTGCTGGCTCTTCAGCATGTCATCCAAGTaGTGGATCTTCTCCCGAAACCCAGCCACTTCCTTTTCTAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ICRTFRCWLFSMSSK*WIFSRNPATSFSRA Trigger: TGCTCTAGAAAAGGAAGTGGCTGGGTTTCGGGAGAAGATCCACCACTTGGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCGGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CAA 90 bp | GCCAACTATATCCCCCATTGGCTGTCTGGAAAAGGCCCTGGTCAGCATGGCACAGAATGGTGGCATCCTTaGACTGGATCACAGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANYIPHWLSGKGPGQHGTEWWHP*TGSQLL Trigger: CAAAAGCTGTGATCCAGTCAAAGGATGCCACCATTC...TGTGCCATGCTGACCAGGGCCTTTTCCAGACAGCCAATGGGGGATATAGTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 90 bp | TTTTCTAGTACCACCTCCTGGATGTACTGGACCTCACTCTTCAGCTaGTCGATGTTCTTCTCATGGGTCATCTTGTCCCCAGACCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSTTSWMYWTSLFS*SMFFSWVILSPDLP Trigger: AGGGAGGTCTGGGGACAAGATGACCCATGAGAAGAACATCGACCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGTGGTACTAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196655.5 |
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| CDS CCA 90 bp | TTTGAATTCTGGAGCTGCTCTATCATCTGCCGAACTTTCCGCTGCTaGCTCTTCAGCATGTCATCCAAGTGGTGGATCTTCTCCCGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FEFWSCSIICRTFRC*LFSMSSKWWIFSRN Trigger: GTTTCGGGAGAAGATCCACCACTTGGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCGGCAGATGATAGAGCAGCTCCAGAATTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS-3UTR CAA 90 bp | TTCCATGAACTATTCATAGCCCCAGAGAATCTTCCTACCCAAAACTGCAGCCTGGGACTCCTGTCAAGCTaGCTACTTATATCCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FHELFIAPENLPTQNCSLGLLSS*LLISSR Trigger: CCGGGAGGATATAAGTAGCAAGCTTGACAGGAGTCC...CAGGCTGCAGTTTTGGGTAGGAAGATTCTCTGGGGCTATGAATAGTTCATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 |
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| CDS TCA 90 bp | CGTGCATCTCTAAGTTCTCAGCCTCCAGATAGGCAATTTTCTCCTTaGGCTCTTGAATGGTGGCATCCTTTGACTGGATCACAGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RASLSSQPPDRQFSP*ALEWWHPLTGSQLL Trigger: CAAAAGCTGTGATCCAGTCAAAGGATGCCACCATTCAAGAGCTCAAGGAGAAAATTGCCTATCTGGAGGCTGAGAACTTAGAGATGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS GCA 72 bp | AGAATGTCCACGCTGCCCGCGGTCTGGCTCTCCGGGTaGACGTCCACCAAGGTACACCAGTTCCGCGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RMSTLPAVWLSG*TSTKVHQFRVP Trigger: CGGGACGCGGAACTGGTGTACCTTGGTGGACGTGCACCCGGAGAGCCAGACCGCGGGCAGCGTGGACATTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196496.2 |
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| CDS GCA 72 bp | CTGAGGAGTGGCCAGGCATCATGGCATAGGTCTTCCTaGCCGCCGCGGTCTGGCTCTCCGGGTGCACGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRSGQASWHRSS*PPRSGSPGARP Trigger: TGGACGTGCACCCGGAGAGCCAGACCGCGGCGGGCAGGAAGACCTATGCCATGATGCCTGGCCACTCCTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS TCA 72 bp | GTTCATCTCCTGTCAGTTCACTCTGGAGCGTCAGCCTaGGAATGTCCACGCTGCCCGCGGTCTGGCTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VHLLSVHSGASA*ECPRCPRSGSP Trigger: CGGAGAGCCAGACCGCGGGCAGCGTGGACATTCTCAGGCTGACGCTCCAGAGTGAACTGACAGGAGATGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196496.2 |
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| CDS TCA 72 bp | ATAACGGCTGAGTGTGACCTCAAAGGCCACACGGTCTaGCTGGTGTCGCCGCTCAGCCTCCCGCAGCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ITAECDLKGHTV*LVSPLSLPQLD Trigger: GTCAAGCTGCGGGAGGCTGAGCGGCGACACCAGTCAGACCGTGTGGCCTTTGAGGTCACACTCAGCCGTTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS CAA 72 bp | CGGTCTGACTGGTGTCGCCGCTCAGCCTCCCGCAGCTaGACAAGCAACTCCTGCACAGTCTTCTTCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSDWCRRSASRS*TSNSCTVFFKL Trigger: GAGCTTGAAGAAGACTGTGCAGGAGTTGCTTGTCAAGCTGCGGGAGGCTGAGCGGCGACACCAGTCAGACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS CAA 90 bp | AAGGCCACACGGTCTGACTGGTGTCGCCGCTCAGCCTCCCGCAGCTaGACAAGCAACTCCTGCACAGTCTTCTTCAAGCTCTCAACATCT | + |
|
Preference number: 6 (lower is better) Translates to: KATRSDWCRRSASRS*TSNSCTVFFKLSTS Trigger: AGATGTTGAGAGCTTGAAGAAGACTGTGCAGGAGTTGCTTGTCAAGCTGCGGGAGGCTGAGCGGCGACACCAGTCAGACCGTGTGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS GCA 72 bp | GCTGACGCAGAGGGTCTCCTGGACTCCTGTCAAGCTTaGTACTTATATCCTCCCGGAGCTTCTGCAGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ADAEGLLDSCQA*YLYPPGASAGS Trigger: ACTGCCTGCAGAAGCTCCGGGAGGATATAAGTAGCAAGCTTGACAGGAGTCCAGGAGACCCTCTGCGTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS GCA 72 bp | GCACGGGCCTGTGTGCTGAAGTTTCCGTGGCTGACCTaGTTCTCTATTAGATGCTCCATGCGGTCGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: ARACVLKFPWLT*FSIRCSMRSCI Trigger: GATGCACGACCGCATGGAGCATCTAATAGAGAAGCAGGTCAGCCACGGAAACTTCAGCACACAGGCCCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 72 bp | GCTATGTGCTCAAGTTCATCTCCTGTCAGTTCACTCTaGAGCGTCAGCCTGAGAATGTCCACGCTGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: AMCSSSSPVSSL*SVSLRMSTLPA Trigger: CGCGGGCAGCGTGGACATTCTCAGGCTGACGCTCCAGAGTGAACTGACAGGAGATGAACTTGAGCACATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006123.11 ENSMUST00000196496.2 |
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| CDS GCA 72 bp | CTGTCAAGCTTGCTACTTATATCCTCCCGGAGCTTCTaGAGGCAGTTCCTGGCCTCCTGGATGTACTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLLLISSRSF*RQFLASWMYWT Trigger: GGTCCAGTACATCCAGGAGGCCAGGAACTGCCTGCAGAAGCTCCGGGAGGATATAAGTAGCAAGCTTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS CCA 72 bp | TCTGTCTTGGCACGGGCCTGTGTGCTGAAGTTTCCGTaGCTGACCTGCTTCTCTATTAGATGCTCCATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SVLARACVLKFP*LTCFSIRCSMR Trigger: CCGCATGGAGCATCTAATAGAGAAGCAGGTCAGCCACGGAAACTTCAGCACACAGGCCCGTGCCAAGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS GCA 72 bp | GGTCTTCCTGCCCGCCTTGATACCTTCTGGGCTATGTaGTCAAGTTCATCTCCTGTCAGTTCACTCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLPARLDTFWAM*SSSSPVSSLWS Trigger: GCTCCAGAGTGAACTGACAGGAGATGAACTTGAGCACATAGCCCAGAAGGTATCAAGGCGGGCAGGAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196496.2 |
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| CDS CCA 72 bp | AGCTTCTGCAGGCAGTTCCTGGCCTCCTGGATGTACTaGACCTCACTCTTCAGCTGGTCGATGTTCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFCRQFLASWMY*TSLFSWSMFFS Trigger: TGAGAAGAACATCGACCAGCTGAAGAGTGAGGTCCAGTACATCCAGGAGGCCAGGAACTGCCTGCAGAAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS GCA 72 bp | TTCTGGAGCTGCTCTATCATCTGCCGAACTTTCCGCTaGTGGCTCTTCAGCATGTCATCCAAGTGGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FWSCSIICRTFR*WLFSMSSKWWI Trigger: GATCCACCACTTGGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCGGCAGATGATAGAGCAGCTCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 72 bp | TGGAGCTGCTCTATCATCTGCCGAACTTTCCGCTGCTaGCTCTTCAGCATGTCATCCAAGTGGTGGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WSCSIICRTFRC*LFSMSSKWWIF Trigger: GAAGATCCACCACTTGGATGACATGCTGAAGAGCCAGCAGCGGAAAGTTCGGCAGATGATAGAGCAGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS GCA 72 bp | GTCCTCCTCTCTCTGAAGGGCCACATTACTCTGTTCTaGTTCTCGCTGATAACGGCTGAGTGTGACCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VLLSLKGHITLF*FSLITAECDLK Trigger: TTTGAGGTCACACTCAGCCGTTATCAGCGAGAAGCAGAACAGAGTAATGTGGCCCTTCAGAGAGAGGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS GCA 72 bp | CTGAAGTTTCCGTGGCTGACCTGCTTCTCTATTAGATaGTCCATGCGGTCGTGCATCTCTAAGTTCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LKFPWLTCFSIR*SMRSCISKFSA Trigger: GGCTGAGAACTTAGAGATGCACGACCGCATGGAGCATCTAATAGAGAAGCAGGTCAGCCACGGAAACTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CCA 72 bp | CTCAACATCTTCACTCATGCTAGGGTCCACCTCAGGTaGGCTACTGTAGAGAGTCATGGGACTCTGACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LNIFTHARVHLR*ATVESHGTLTK Trigger: TTTAGTCAGAGTCCCATGACTCTCTACAGTAGCCCACCTGAGGTGGACCCTAGCATGAGTGAAGATGTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 ENSMUST00000200407.2 |
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| CDS TCA 72 bp | CTAAGTTCTCAGCCTCCAGATAGGCAATTTTCTCCTTaGGCTCTTGAATGGTGGCATCCTTTGACTGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSQPPDRQFSP*ALEWWHPLTGS Trigger: TGATCCAGTCAAAGGATGCCACCATTCAAGAGCTCAAGGAGAAAATTGCCTATCTGGAGGCTGAGAACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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| CDS CAA 72 bp | CTTGAATGGTGGCATCCTTTGACTGGATCACAGCTTTaGAATTCTGGAGCTGCTCTATCATCTGCCGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: LEWWHPLTGSQL*NSGAALSSAEL Trigger: AAGTTCGGCAGATGATAGAGCAGCTCCAGAATTCAAAAGCTGTGATCCAGTCAAAGGATGCCACCATTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006123.11 ENSMUST00000196655.5 ENSMUST00000196733.5 |
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